NEXUS
[File created by TreeBASE:  7/26/07  21:01:03]
[Matrix accession#: M1243]

BEGIN TAXA;
	TITLE M1243;
	DIMENSIONS  NTAX=109;
	TAXLABELS
		Indigofera_astragalina	Indigofera_lupatana	Indigofera_mauritanica	Indigofera_dalzellii	Indigofera_dimidiata	Indigofera_nebrowniana	Indigofera_grata	Indigofera_amoena	Indigofera_candolleana	Indigofera_swaziensis	Indigofera_rhynchocarpa	Indigofera_longiracemosa	Indigofera_poliotes	Indigofera_argentea	Indigofera_spinosa	Indigofera_coerulea	Indigofera_articulata	Indigofera_tephrosioides	Indigofera_lespedezioides	Indigofera_marmorata	Indigofera_oblongifolia	Indigofera_truxillensis	Indigofera_colutea	Indigofera_tinctoria	Indigofera_torulosa	Indigofera_rugosa	Indigofera_zollingeriana	Indigofera_dosua	Indigofera_himalayensis	Indigofera_hebepetala	Indigofera_amblyantha	Indigofera_pendula	Indigofera_caloneura	Indigofera_australis	Indigofera_pratensis	Indigofera_mildbraediana	Indigofera_hilaris	Indigofera_rubroglandulosa	Indigofera_filifolia	Indigofera_capillaris	Indigofera_filicaulis	Indigofera_sarmentosa	Indigofera_alopecuroides	Indigofera_angustata	Indigofera_hispida	Indigofera_cytisoides	Indigofera_denudata	Indigofera_angustifolia	Indigofera_heterophylla	Indigofera_porrecta	Indigofera_cuneifolia	Indigofera_ionii	Indigofera_trifoliata	Indigofera_trita	Indigofera_bemarahaensis	Indigofera_leucoclada	Indigofera_schimperi	Indigofera_microcarpa	Indigofera_leptocarpa	Indigofera_cordifolia	Indigofera_disticha	Indigofera_ammoxylum	Vaughania_cerighellii	Vaughania_humbertiana	Vaughania_pseudocompressa	Vaughania_depauperata	Vaughania_mahafalensis	Indigofera_koreana	Indigofera_grandiflora	Indigofera_venulosa	Indigofera_decora	Indigofera_kirilowii	Indigofera_varia	Indigofera_braamtonyi	Indigofera_jucunda	Indigofera_arrecta	Indigofera_natalensis	Indigofera_suffruticosa	Indigofera_tristis	Indigofera_zeyheri	Indigofera_gleichenoides	Indigofera_frondosa	Indigofera_sanguinea	Indigofera_stenophylla	Indigofera_longimucronata	Indigofera_tetrasperma	Indigofera_paniculata	Indigofera_vohemarensis	Indigofera_strobilifera	Indigofera_kirkii	Cyamopsis_dentata	Cyamopsis_tetragonoloba	Cyamopsis_senegalensis	Indigastrum_argyraeum	Indigastrum_costatum	Microcharis_galpinii	Microcharis_latifolia	Phylloxylon_spinosa	Phylloxylon_perrieri	Phylloxylon_xylophylloides	Rhynchotropis_poggei2	Rhynchotropis_poggei	Dalbergiella_nyassae	Hypocalyptus_sophoroides	Hypocalyptus_coluteoides	Goodia_lotifolia	Austrosteenisia_blackii	Indigofera_thibaudiana	Indigofera_conzattii
	;
END;

BEGIN CHARACTERS;
	TITLE M1243;
	DIMENSIONS NCHAR=860;
	FORMAT datatype = dna symbols = " 012 " gap = - ;
	MATRIX
		Indigofera_astragalina           1000000000010110020010000010001?????????????????????????????????????CCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--ATGACCCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GCTTGGCGTGCG--AAAGCACC-CTTGCCT-C-CCCC----GGCACAGGAGGCGGCCAC-GC----TCCGTGGCTGTCTCTCAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-TATTCGGTGAGCTCCT-GGCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-CGGGA-TCTATTA---TTCCAAA-TGACTCTCGGCAACTGATATATCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAAC???????????????????????????????????????????????????????????????????????????????????????????????????????????????????-???????????????????????????????-???????????????????????????????????????????????????????????????????????????-----?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Indigofera_lupatana              1000000000010110020000010100001???????????????????????????????????????????????????????????????????????????????????????????????????--???????????????????????????????????????????????????????????-???????????????????????---???????????????????????????????-???????????????????????????????????-??????????????????????????????????????????????????????????????????????????????-????????????????????????????????????????????????????????????????????TGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCA--CAA-TGTCTCCTTAT-GGAGTC-ATT-GAGGAG-TGAATGTT-GGCTTCCCATGAGCA-T-AGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCAT-------------------GACT-CTT-GCCAA-TTTTAG-GACT-TTGTGACCCATAT--GCATC---TTCGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_mauritanica           1000000000011110020000100010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCAAAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTTCTT-GGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCCGAGAGGCGGCCAC-ACCC--CATGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCTGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGCGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATTGTGCGT-------------------GACT-CTT-GCTAA-TTTTCG-GACT-TCATGACCCATAT--GCATC---TTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_dalzellii             1001000000010110020010011110001????????GTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGTTTCCTTACAAGA-AAT--CTGACTCGCG-AACATGTT--T---GCTTACTTC-TGGCTG-GTTTGGGGTGTG--TAAACACG-CCTGCCT-C-CCA----AGCGCTGAGAGGCGGCTGC-AG----TTTGTGGTCGTCTCTTAGCCTCT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCAAATT-TTTGCGATGCGCTCCC-GCGTGCCC-GGAAACGGTGCT-GCGCGGGCGGCG--T-TGAG-----TCTATTATTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGCTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCA--CAA-TGTCTCCTTAC-GGGGTC-ATT-GAGGAG-CGAATGCT-GGCTTCCCATGAGCA---TGTCTCGTGGTTGGTTGAAAATCAAGTCTGCGGTGG-AGCACGCCGCGGTTGTT--GGTGGCTGAGT-AAACG-----CTCGAGACCC-ATCGTGCGC-------------------GATG-CTT-TCCGA-ACAGAG-GACT-TAGCAACCCATAT--GCATC---CTTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_dimidiata             1010000100010100020000100010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAACATT-CTTGCCTTC-CCT----AGGGCTTTAAGGCGGTCAC-ACCA--TGTGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-TGTGA-TACATTATTATTCGAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCA--CAA-TTTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTAGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT-AAAAT-----CTCGAGACCC-ATTGTGCGT-------------------GACT-CTT-GCTAA-TTTATG-GACT-TCATGACCCATAT--GCATC---TATGA-T-GCTC--ACAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_nebrowniana           10000000001101100200?0000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCAAAAGC-AAT--CCAACTCGTG-AACATGTT--T---GCTCACTT-GGGGTTG-GCATGGGGTGTG--AAGACACG-CCTACCT-C-CCCC---AGGGCTGGGAGTTGGCC---------TGCGTGGCTTTCTCGTAGTCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCAAATT-TATTCAGTGCGCCCCT-ACTAGCCT-GGAAACGGTGCT-ATGTGGGCGGTG--T-CGTGA-TGCATTA---TTCAATA-CGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAACC--CAA-TGT----------------------GGAG-CGAATGTT-GGCTTCCCATGAGCT-T-CGTCTCGTGGTTGGTTGAAAAGCAAGTCTGTGGTAG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--TAAG-----CTCGAGGCCTTGTCGTGTGT-------------------GGCT-CTA-GCCAT-GATCCA-GACT-TTGTGACCCATAT--GCATCATCTTTGG-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_grata                 1000000001010110020010000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTAACAAGA-AAT--CTAACTCGTG-AACATGTT--T---GCTCACTT-GGGGATG-GCATGGGGTGTG--AAAACACG-CCTACCT-C-CCCCC---GGACTGGGAGGCAGCCAC-AC----TGCGTTGCTGTCTCCTAGTCCTT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCAAATT-TATGTAGTGCGCTCCT-ACTAGCCC-GGAAACGGTGCT-GTGTGGGTGGCG--T-TGCGA-TGGATTA---TTCAATA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAACCC--CAA-TGTCTCTGTCA-AGGGTC-GTT-GAGGAG-CAAAAGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AACGCGCCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGGCCCTATCGTGCGCCCGAGGCCGTATCATGCGTGCTT-CTA-GCAGT-CATCCA-GACT-TTGTGACCCATAT--GCATC---TTTGG-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_amoena                1000000000010100020000000010001?????????TCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTACCTTC-CCC----AGGGCTTTTAGGCGGTCAC-ACAA--TGTGTGGCTGCCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCTAATCA--CAA-TTTCTCCTTTT-GGAGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCA-C-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTTTG-GACT-TCATGACCCATAT--GCATC---GCTGA-T-GCTC--ATAATGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_candolleana           1000000000011110020000100010001?????????????????????????????????????????????????????????????????????????C-AAT--ACGACTCGTG-AACTTGTT--T---GCTTACTTTGGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCCGAGAGGCGGCCAC-ACC---CCGTTGGCTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCTGTGCGTTCCC-CACAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTCGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCG-T-CGTCTCGTGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGCGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTG-GCTAA-TTTTCG-GACT-TCATGACCCATAT--GCATC---TTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCG??????????????????????????????????????
		Indigofera_swaziensis            1000000000010111020000000010001???????????????????????????????????????????????????????TG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTC-GGGGTTG-GTCTGGCGTGTG--AAAACACG-ACTGCCT-C-CCCT----GGCACGGGAGGCGGCCAC-GC----TCCGTGACCGTCTCTCAGCCTCT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCCAATT-CATTCAATGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGCGGCT--T-CGTGA-TCTATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAAGC--CAA-CGTCTCCTTTTGGGGGTC-GTC-GGGGAG-CGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCGTGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AGAAG-----CTCGAAACCG-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCG-GACT-TTGTGACCCATAT--GCATC---GTTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_rhynchocarpa          1000000000011111020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACCCGCG-AACATGTT--T---GCTTACTC-GGGGTTG-GTTTGGCGTGCG--AAAACACG-ACTGCCT-C-CCC----CGGCACCGGAGGCGGCCAC-GC----TCCGTGGCTGTCTCTCGGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CGTTCAACGAGCTCCT-GCCGGCCC-GGAGACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TACACTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGGAATGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTCT-GGGGTC-GTT-GGGGAG-CGTAAGCT-GGCTTCCCATGGGCT-T-CGTCTCATGGTTGGCTGAAAATCAGGTCCGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCG-ATCGCGCGT-------------------GGCT-CTT-GCAAG-GCTTCG-GACT-TTGTGACCCATAT--GCATC---CCTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_longiracemosa         1000000000010111020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGA-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACACA-ACTGCCT-C-CCC----TGGCACGGCAGGCGGCCAC-GC----TCCGTGGCTGTCTCTCGGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CGTTCAATGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCAGGTGGCT--T-TGTGA-TCTTTTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGTTCCAATGC--CAA-CATCTCTTTTT-GGGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAGCCA-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCG-GACT-TTATGACCCATAT--GCATC---CTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATT--GGGAGGAAAAGAAA
		Indigofera_poliotes              1000000001010110020010000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTAACAAGC-AAT--CTAACTCGTG-AACATGTT--T---GCTCACTT-GGGGATG-GCATGGGGTGTG--AAAGCACG-CCTACCT-C-CCCC---CGGACTGGGAGGCAGTCAC-AC----TGCGTTGCTGTCTCCTAGTCCTT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCAAATT-TATGTAGTGCGCTCCT-ACTGGCCC-GGAAACGGTGCT-GTGTGGGTGGCG--T-TGCGA-TGGATTA---TTCAATA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCC????????????????????????????????????????????????????????-???????????????????????????????-???????????????????????????????????????????????????????????????????????????-----?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Indigofera_argentea              1000000001010110020010000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTTACTCGTG-AACATGTT--T---TCTCACTT-GGGGTTG-GCATGGGGTGTG--AAAACACG-CCTACTT-C-CCC----TGGATTGGGAGGCAGCCAC-AT----TGCGTTGCTGTCTCTTAGTCCCT-AACAAA-ACCCC-GGCGCTGCATGCGCCAAGGAAATCAAATT-TATGTAGTGCGCTCCA-ACAAGCTC-GGAAACGGTGTT-GTGTTGGTGGCG--T-TGCGA-TGGATTA---TTCAATA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCTAACCC--CAA-TGTCTCACTCT-AGGGTC-ATT-GAGGAG-CAAAAGTT-GGCTTCCCATGAGCG-T-TGTCTCATGGTTGGTTGAAAATCAAGTCTGTGCTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCCTATCGTGGGT-------------------GCCT-TTTAGCCAT-GATCCA-GAAT-TTGTGACC-ATAT--GCATC---TTTGG-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAACC????????????
		Indigofera_spinosa               1000000000010110020000010010001??????AAGTCGTAACAAGGTTTCCGTAGGT---GGACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTGACTCGTG-AACATGTT--T---GCTTACTTTGGGGTCG-GCTTGGAGTGTG--AAAACACG-CCTGCCT-C-CCC----AAGACTGGGAGACAGCCAC-GC----CATGTGGTTGTCTCTTAGTCTTC-AACAAA-CCCCC-GGCGCGGCATGCGCCAAGGAAATCTAATT-TATTCTGTGCGCTCCC-GTATGCCC-GGAAGCGGTGTT-GTGCGGGTTGCG--T-CGAGT-TATATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCACACAA-TGTCTCCTTAT-GGGGTC-ATT-GAGGAG-CGAATGTT-GGCTTCCCATGAGCA-T-AGTCTCATGGTTGGTTGAAAAACAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-TCCAA-GTTCAT-GACT-TTGTGACCCATAT--GCATC---TTTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAG??????????????
		Indigofera_coerulea              1000000000010111020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGAAATT--CCGACTCGTGGAACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-TCCT----GGTACGGGAGGCGGCCAC-GC----TCCGTGGTTGTCTCTCGGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CGTTCAACGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTGTTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-CGTCTCATTTT-GGGGTC-GTT-GGGGAG-TGTATGCT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTTTGGTGGTTGAGT-AAAAG-----CTCGAAGCCA-ATCGTGCGT-------------------GGTT-CTT-GCAAG-GTTTCG-GACTTTCGTGACCCATATA-GCATA--CCTTGA-T-GCTCTTATAAC-AGACCTC-AG??????????????????????????????????????????????????????????
		Indigofera_articulata            1000000000010111020000000010001????????GTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGA-AAT--CCGACTCGTG-AACATGTT--T---GCTTAACTTGGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-TCC----TGGTACGGGAGGCGGCCAC-GC----TCCGTGGTTGTCTCTCGGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CGTTCAACGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTGTTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-CGTCTCATTTT-GGGGTC-GTT-GGGGAG-TGTATGCT-GGCTTCCCATGCGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGTAAAAAG-----CTCGAAGCCCAATCGTGCGT-------------------GGTTTCTTTGCAAG-GTTTCTTGACT-TTGTGACCCACAT--GCATC--CTTTGAAT-GCTC--TTAAC?????????????????????????????????????????????????????????????????????
		Indigofera_tephrosioides         10000000000101100200100?0100001??????????????ACAA-GTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CGGACTCGTG-AACATGTT--T---GCTTACTTT--GGATG-GTCTGGAATGTG--AAAACACG-CCTACCA-C-CCA----AGGGCTGGGAGGTGGCCAC-GC----TGCGTGGTCGTCTCTTAGCCATT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCTAATT-TATTCAGTACGCTCCT-GTGTCCCC-GGAAACGGTGTG-GTGCGGGTGGCG--T-TGAG------TTATA-TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAAGCA--CAA-TGTCTTCTTAT-GGAGTC-ATT-GAGGAG-TGAATGTT-GGCTTCCCATGAGCA-T-TGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCATGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCCAG-GTTTCA-GACT-TAGTGACCCATAT--GACTC--TTTTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAA???????????????????????????
		Indigofera_lespedezioides        10000000000101100200100?0110001??????????????????GGTTT-----------------GCGGAAG--GATCGATG-TCGATGCCTCACAAGC-AAT--CGGACTCGTG-AACATGTT--CA--ATTTACTTT-GGGTTG-GTTTGGAGTGTG--AAAACACG-CCTACCT-C-CCA----AGGGCTAGGAGGTGGCCAC-GC----TGCGTGGTCGTCTCTTAGCCGTT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCCAATT-TATTCAGTACGCTCCC-GTGTCCCC-GGAAACGGTGCGGTTGCGGGTGGCG-G--TGAG------TTATA-TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCA--CAA-TGTCTTCTTAT-GGAGTC-ATT-GAGGAG-TGAATGTT-GGCTTCCCATGAGCA-T-TGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTCCACCATGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCCAG-GTTTCA-GACTTA-ATGACCCATAT--GCATC---TCTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGCTCTACCCGCTGA??????????????????????????????????
		Indigofera_marmorata             1000000000010110120010010100001????????????????????????????????????????GCGGAAG---ATCATTG-TCGATGCCTCACAAGC-AAT--CTGACTCGTG-AACATGTT--T---GCTTACTTT-GGGTTG-GTTTGGAGTGTG--AAAACACG-CCTGCCT-C-CCC----AGGTCTGGGAGGCGGCCAC-GA----TGCGTGGTTGTCCCTTAGCCTTT-AACAAA-CCCCC-GGCGCGGCATGCGCCAAGGAAATCTAATT-TATTCTGTGCGCTCCC-GTACGCCC-GGAAACGGTGTT-GTGCGGGTGGCG--T-TGAGT-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCA--CAA-TGTCTCCTTAT-GGAGTC-ATG-GCGGAG-CGAATGTT-GGCTTCCCATGAGCA-T-AGTCTCATGGTTGGTTGAAAACCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCCAG-GTTTTG-GACT-TTGTGACCCATAT--GCATC---TTTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC---GGCTACCCGCTGA??????????????????????????????????
		Indigofera_oblongifolia          10000000000101100200?00100?0001??????????????????????????????????????????????G--GATCATTG-TCGATGCCTCACAAGC-AAT--CTAACTCGTG-AACATGTT--TT--GCTTACTTT-GGGT-G-GTTTGGAGTGTG--AAAACACGGCCTGCCT-C-CAC----AGGGCTGGGAGGTAGCCAC-GC----TGCGTGGTTGTCTCTTGGCCTTT-AACAAA-CCCCC-GGCGCGGCATGCGCCAAGGAAATCTAATT-TATTATGTGCGCTCCC-GTACACCC-GGAAACGGTGTT-GTGCGGGTGGCGTGT-TGAGT-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCA--CAA-TGTCTCCTTAT-GGATTC-ATC-GAGGAG-CGAATGTT-GGCCTCCCATGAGCA-T-AGTCTCATGGTTGGCTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCC-ATCGTCCGT-------------------GACT-CTT-TCCAG-GATTAA-GACT-TTGTGACCCATAT--GCATC--TTTTGA-T-GCGC--ATGACGAGACCTC-AGGTCAG-GC??????????????????????????????????????????????????
		Indigofera_truxillensis          1000000000010111020000000010001???????????????????GTTTCCGTAGGTCGAGA-CCTGCGGAAGTTGAAAATTG-TCGATGCCTC--AAGC-AATACCCGACTCGCG-AACATGTT--T---GCTTACTC-GGGGTTG-GCTTGGCGCGTG--AAAACGCG-ACGGCCT-C-CCCT----GGCACGGGAGACGGCCAC-GC----TCCGTGGTTGTCTCTCAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-TGTTCAACGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTGTTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-CGTCTCATTTT-GGGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-C-CGTCTCATGGTTGGTTGAAAACCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGTAAAAAG-----CTCGAAGCCA-ATCGTGCGT-------------------GGCT-CTT-GCAAG-TTTTCG-GACT-TTGTGACCCATAT--GCATC---CTTAA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GT???????????????????????????????
		Indigofera_colutea               10000000010101100200?0000010001?????????????????????????GTAAGTCGAGA--GGACGGA--TTGAAAATTG-TCGATGCCTCACAAGC-AAT--CTAACTCGTG-AACATGTT--TT--CTCAACTTGGGGGATGGCCATGGGGTGTG--AAAACACG-CCTACCT-C-CCCC---TGGATTGGGAGGCAGCCAC-AC----TGTGTTGCTGTCTCCCAGTCCTT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCAAATT-TATTTAATGCGCTCCT-ACTAGCCC-GGAAACGGTGCT-GTGTGGGTGGTG--T-TGCAA-TGGATTA---TTCAATA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAACCC--CAA-TGTCTCTGTCT-AGGGTC-ATT-GAGGAG-CAAAAGTT-GGCTTCCCATGAGCG-T-TGTCTCATGGTTGGTT-AAAATCAAGTCTGTGGTGG-A-TGTGCCGCGATTGTT--GGTGGTTGAGT--AAAA-----CTCGAGACCTTATCGTGTGT-------------------GCTT-CCA-GCCGT-GATCCA-GACT---GTGACCCATAT--GCATC---TTTGG-TGGCTC--ATAACGAGACCTCCAGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAA???????????????????????????
		Indigofera_tinctoria             1000000000010111020000000010001????????????????????TTTCCGTAGGTCGAGA---GGCGGAAG--GATCATTG-TCGATGCCTC--AAGA-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTAGGCGTGTG--AAAACACG-ACTGCCT-C-CCCT----GGCACGGGAGGCGGCCAC-CC----TCCGTGGCTGTCTCTCAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTGTTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAG-CGTCTCCTTTT-GGGGTC-GCT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGATGAGT-AAAAG-----CTCGAAGCCA-ATCGTGCGT-------------------GGCT-CTT-GCAGG-GTTTCA-GACT-TTGTGACCCATAT--GCATC---CTTGATGGGCTC---AAACGAGACCTC-AGGTCA??????????????????????????????????????????????????????
		Indigofera_torulosa              1000000000010110020010010000001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTAACAAGC-AAT--CTGACTCGTG-AACATGTT--T---GCTTACTT-AGGGTTG-GTTTGGGGTGTG--AAAACACT-CCTGCCT-C-CCC----GGGGCTCAGCGGCGGCCAC-AT----TGTGTGGTCATCTCTAAGCCTTT-AACAAA-CCCCCCGGCGCTACATGCGCCAAGGAAATCTAATT-TATTCATTGCGCTCCCTGTACGCCCCGGAAACGGTGTT-GTACGGGTGGCG--T-TGAGT---TATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCAGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAACA--CAA-TGTCTCGTTAT-CGATTC-GTT-GTGGAG-CGAATGTT-GGCTTCCCATGAGCA-T-CGTCTCATGGTTGGTTGAAAATAAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGGGT--GAAG-----CTCGAGACCCTATCGTGCGT-------------------GACT-CTT-TCCTG-G-TTAG-GACT-TTGTGACCCATAT--GCATC---TCTGA-T-GTTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_rugosa                1000000000010110020010000010001AAGTAAAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGA-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTAG-GTTTGGCGTGCG--AAAACACG-ACTGCTT-C-CCC----TGGCACGGGAGGCGGCCAC-GC----TCCGTGGCTGTCCCTCGGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCGACGAGCCACT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTATTA---TACAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-CGTCTCCTTTT-GGGGTG-GTT-GGG-AG-CGTATGCT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAGCCA-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCG-GACT-TTGTGACCCATGT--GCATC---GTTGAAT-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGTAGTTTAAGCATATCATTAAGC?????????????
		Indigofera_zollingeriana         1000000000011111020000000010001????AAAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAC--CCGACCCGTG-AACATGTT--T---GCTTACTC-GGGGTTG-GTTAGGCATGTG--AAAACACG-TCTGCCT-C-CCC----TGGCACGGGAGGCAGCCAC-GC----TCCGTGGCTGTCTCTCGGCCCTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCCAATT-CGTTCGACGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GTGCGGGTGGCT--T-TGTGA-TCTATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATC-AGGTTGAGGGCACGCCTGCCTGGGTGTCACGCATCGTTGCTCCAACGC--CAA-TGTCTCCTTTC-AGGGTC-GTT-GGGGAG-CGTATGTT-GGCTTCCCACGAGCT-T-CGTCTCGTGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AGAAG-----CTCGAAACCG-ATCGTGCGT-------------------GTCT-CTC-GCAAG-GTTTCG-GACT-TTGCGACCCGTAA--GCATC---CTCGAAT-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGAAGTTTAAGCATATCATT?????????????????
		Indigofera_dosua                 1000000000010110020000000010001AAGTAAAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGAGTGTG--AAAACACG-ACTGCCT-C-CCC----TGGTG-AGGAGGCGGCCAC-GC----TTTGTGGCTGTCTCTTAACCTTC-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGTGGGTGGCT--T-TGTGA-TATATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-TGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGCGT-------------------GGCTTCTT-GCAAG-GTTTCA-GACT-TTGTGACCCATAT--GCATC---CTTGAAT-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGTTACCCGCTGAAGTTTAAGCATATCATTAAGC?????????????
		Indigofera_himalayensis          1000000000011110120000100010001AAGTAAAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTACCT-C-CCCC---CGGTG-AGGAGGCGGCCAC-GC----TTCGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTATT------CAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCT-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCA-GACT-TTGTGACCCATAT--GCATC---CTTGAAT-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGAAGTTTAAGCATATCATTAA???????????????
		Indigofera_hebepetala            1000000000010110120000100010001AAGTAAAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACACT-ACTGCCT-C-CCCC----GGTG-AGGAGGCGGCCAC-GC----TTCTTGGCTGTCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCGACGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTA-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATCT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGTGT-------------------GGCT-CTT-GCAAG-GTTTCA-GACT-TTGCGACCCATAT--GCATC---CTTGAAT-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGG-CTCCCTGCTGAAGTTTAAGCATATCATTAAGC?????????????
		Indigofera_amblyantha            1000000000011110120000000010001AAGTAAAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGAGTGTG--AAAACACG-ACTGCCT-C-CCCC----GGCG-AGGAGGCGGCCAC-GC----TTCGTGGCTGTCTCTTAGCCTTC-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TATATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-CGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGTGT-------------------GGCT-CTT-GCAAG-GTTTCA-GACT-TTGTGACCCATAT--GCATC---CTTGAAT-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGAAGTTTAAGCATATCATTAAGC?????????????
		Indigofera_pendula               1000000000011110120000000010001AAGTAAAAGTCGTAACAAGGTTTCTGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-CCCC----GGCGCAGGAGGCGGCCAT-GC----TTCGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTG-GGGGTC-GTT-GTGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGCGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCA-GACT-TTGTGACCCATAT--GCATC---CTTGAAT-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGAAGTTTAAGCATATCATTAAGC?????????????
		Indigofera_caloneura             1000000000010111020000000010001???TAAAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCATGTG--AAAACACG-ACTGCCT-C-CCC----TGGCACGGGAGGCAGCCAC-GC----TCTGTGGCTGTCTCTCAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAACGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCACCGGTGGCT--T-TGTGA-TCTATTA---CTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAAGGTTGAGGGCACGCCTGCCTGGGTGTCACGCATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-AGGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCGTGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCATCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAGACCG-ATCGTGCGT-------------------GGCT-CTC-TCGAG-GTTTCA-GACT-TTGCGACCCATAT--GCATC---C---------------AACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGAAGTTTAAGCATATCATTAAGC?????????????
		Indigofera_australis             1000000000010110020000?00010001AAGTAAAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGCAAAT--CCGACTCGTG-AACATGTT--T---GCTTACTC-GGGGTAG-GTTTGGCGTGTG--AAAACACG-ACTGCTT-C-CCC----TGGCACGGGAGGCGGCCAC-GC----TCCGTGGCTGTCTCTCAGCCTTTTAACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCGACGAGCTCCT-GCCAGCCC-GGAAACGGTGCC-GCGCGGGTGGCT--T-TGTGA-TATATTA---TTCGAAA-TGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACGTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-CGTCTCCTATT-GGGGTC-GTT-GGGGAG-TGTATGCT-GGCTTCCCATGAGCT-T-CGTCTCGTGGTTGGTTGAAAATCAAGTCCGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAGCCA-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCG-GACT-TTGTGACCCATGT--GCATC---CTCGAAT-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCTGATGAAGTTTAAGCATATCATT?????????????????
		Indigofera_pratensis             100000000001011?020000000010001AAGTAAAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC---AA-AAAT--CCGACTCGTG-AACATGTT--T---GCTTACTC-GGGGTAG-GTTTGGCGTGCG--AAAGCACG-ACTGCTT-C-CCC----TGGCACGGGAGTCGGCCAC-GC----TCCGCGGCCGTCTCTCAGCCTCT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCGACGAGCTCCT-GCCGGCCC-GGAAACGGTGCT-GCGCGGGTGGCC--C-TGTGA-TCTATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAACGC--CAA-CGTCTCCTTCT-GGGGTC-GTT-GGGGAG-CGTATGCT-GGCTTCCCACGAGCT-T-TGGCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGCGCACCGCGATTATCT-GGTGGATGAGT-AAACG-----CTCGAAGCCA-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCT-GACT-TTGTGACCCATGT--GCATC---CTCGAAT-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGAAGTTTAAGCATATCATTAAGC?????????????
		Indigofera_mildbraediana         1000000001010110020010000010001????????????????????????????????????ACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTAACTCGCG-AACATGTT--T---GCTCACTT-GGGGATG-GCATGGCGTGTG--AAAACACG-CCTACCT-C-CCCC----GGACTGGGAGGCAGCCGC-GC----CGTGCTGTTGTCTCCTAGTCCTT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCAAATT-TATTCAGTGCGCTCCT-ACTAGCCC-GGAAACGGTGCT-GTGTGGGTGGCG--T-TGCAA-TGGATTAT--TTCAATA-CGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAACCC--TAA-TGTCTCTGTCA-AGGGTC-ATT-GAGGAG-CAAAAGTT-GGCTTCCCATGAGCG-T-TGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGTAAAAAG-----CTCGAGGCCTTATCGTGTGT-------------------GCCT-CTA-GCCGT-GATCCA-GACT-TTGTGACCCATAT--GCATC---TTTGG-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_hilaris               1000000001010110020010000010001AAGGAGAAGTGGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTAACTCGTG-AACATGTT--TT--GCTCACTT-GGGGATG-GCATGGGGTGTG--AAAACACG-CCTACCT-C-CCC----TGGATTGGGGGGCAGCCAC-AC----TGTGTTGTTGTCTCTTAGTCCTT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCAAATT-TATTTAGTGCGCTCTT-ACTAGCCC-GGAAACGGTGCT-GTGTGGGTGGCG--T-TGCGA-TGGATTA---TTCAATA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGTTCCAACCC--CAA-TGTCTCATTCT-AGTTTC-ATT-GAGGAG-CAAAAGTT-GGCTTCCCATGAGCG-T-TGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCCTATCGTGCGT-------------------GGCT-CTA-GCCAT-GATCCA-GACT-TTGTGACCCATAT--GCATC---TTTGG-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTT-AAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_rubroglandulosa       1000000001010110020010000010001AAGGAGAAGTGGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTAACTCGTG-AACATGTT--TT--GCTCACTT-GGGGATG-GCATGGGGTGTG--AAAACACG-CCTACCT-C-CCC----TGGACTGGGGGGCAGCCAC-AC----TGTGTTGTTGTCTCTTAGTCCTT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCAAATT-TATTTAGTGCGCTCTT-ACTAGCCC-GGAAACGGTGCT-GTGTGGGTGGCG--T-TGCGA-TGGATTA---TTCAATA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGTTCCAATCA--CAA-TGTCTCATTCT-AGTTTC-ATT-GAGGAG-CAAAAGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCCTATCGTGCGT-------------------GGCT-CTA-GCCAT-GATCCA-GACT-TTGTGACCCATAT--GCATC---TTTGG-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_filifolia             1000101000011100020000100010001???????????????????????????AGGT---GAACT?GCGGAAG--GATCATTG-TC?AT?CCTCA-AAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCATACTT-GGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCTGGGAGCTGGCCAC-ACCC--TGTGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCTC-CTCAGTCC-GGAAACGGTTCT-GTGTGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCA--CAA-TGTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGYGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTTCG-GACT-TCATGACCCATAT--GCATC---TTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGC?????????????
		Indigofera_capillaris            100000100001?110020000100010001????????????????????????????GGT---GAACTCGCGGAAG--GA-CATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTA--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAGCACG-CCTGCCT-C-CCCC---AGGGCCGAGAGGCGGCCAC-ACCA--TGTGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-GTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGCGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTTCG-GACTTTCATGACCCATAT--GCATC---TTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAA??????????????????
		Indigofera_filicaulis            100000100001?110020000100010001??????????????????????????????????????CTGCGGAAG--GATCATTG-TCTATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTCTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCCGAGAGGCGGCCAC-ACCC--CGTGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCAYGAGCG-T-CGTCTCRTGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGCGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTTTG-GACT-TCATGACCCATAT--GCATC---TTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCAT-TCAA-AAGC?????????????
		Indigofera_sarmentosa            1000000000011110020000100010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCCGAGAGGCGGCCAC-ACCCC-CGTGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCTGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGCGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTTCG-GACT-TCATGACCCATAT--GCATC---TTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_alopecuroides         1000000000011110020000100010001???????????????????????????????---???????CGGAAG--GATCATTG-TCTATGCCTCACAAGC-AAT--GTGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAGCACG-CCTGCCT-C-CCCC---AGGGCCGAGAGGCGGCCAC-ACCC--CGTGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCTGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGCGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTTCG-GACTTTCATGACCCATAT--GCATC---TTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGC?????????????
		Indigofera_angustata             10?0010000011110020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCCGAGAGGCGGCCAC-ACCC--TGTGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCCTTTT-GGGTTC-ATT-GGGGAG-TGAATGCT-GGCTTCCCATGAGCG-T-CGTCTCGTGGTGGGGCGAAAATCAAGTCTGTGGTGG-AGCGCACCGCGATTGTT--G????TTGA?T-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTTCG-GACT-TCATGACCCATAT--GCATC---TCTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_hispida               1000000000011110120010000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCCC--AGGGCCGAGAGGCGGCCAC-ACCA--TGTGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGCGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTTCG-GACT-TCATGACCCATAT--GCATC---TCTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_cytisoides            1000000000011110020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---CCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCCGAGAGGCGGCCGC-ACCC--TGTGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGTGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTTCG-GACT-TCATGACCCATAT--GCATC---TGTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAA??????????????????
		Indigofera_denudata              1000010000011110020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCCGAGAGGCGGCCAC-GCCC--TGTGTGGCTGTCCCTCAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGCGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCGTTTT-AGGGTC-GTT-GGGGAG-TGAATGTT-GGCTTCCCACGAGCG-T-CGTCTCGTGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAG-TTTGTG-GACT-TCATGACCCATAT--GCATC---TTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_angustifolia          1000000000011110020000100010001??????????????????????????????????????????????G--GATCATTG-TCGATGCCTCACAAGC-AAT--ATAACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCCGAGAGGCGGCCAC-GCCC--TGTGTGGCTGTCCCTCAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCG--CAA-TGTCTCCTTTT-AGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCACGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGCGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAG-TTTTCG-GACT-TCATGACCCATAT--GCATC---TTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAA???????????????
		Indigofera_heterophylla          1010000000010110020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--CAAACATG-CCTGCCT-T-CCCC---AGGGCTTTTAGGCGGTCAC-ACAA--TGTGTTGCTGTCTCTTAGCCATT-AACAAA-CCCAC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGTGGGTGACG--T-CGTGA-TACATTATTATTCGAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCTAATCA--CAA-TTTCTCCTTTT-GGAGTC-ATT-GTGGAG-TGAATGTT-GGCTTCCCATGAGCA-C-TGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCACGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CCT-GCTAA-TTTTTG-GACT-TCATGACCCATAT--GCATC---GCTGA-T-GCTC--ATAATGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_porrecta              1010000000010110020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--CAAACATG-CCTGCCTTC-CCC----AGGGCTTTTAGGCGGTCAC-ACAA--TGTGTTGCTGTCTCTTAGCCATT-AACAAA-CCCAC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGTGGGTGACG--T-CGTGA-TACATTATTATTCGAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCTAATCA--CAA-TTTCTCCTTTT-GGAGTC-ATT-GTGGAG-TGAATGTT-GGCTTCCCATGAGCA-C-TGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CCT-GCTAA-TTTTTG-GACT-TCATGACCCATAT--GCATC---GCTGA-T-GCTC--ATAATGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAT
		Indigofera_cuneifolia            1010000100010100020000100010001???????????????????????????????---??ACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCTTACTT-GGGGTTG-GTTTGGGGTGTG--AAAACATG-CCTGCCTTC-CCC----AGGGCTTTTAGGCGGTCAC-ACCA--TGTGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCCC-CTCAGTCC-GGAAACGGTGCT-GTGCGGGTGACG--T-TGTGA-TACATTATTATTCGAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCA--CAA-TTTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT-AAAAT-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTATG-GACT-TCATGACCCATAT--GCATC---TATGA-T-GCTC--ACAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGC?????????????
		Indigofera_ionii                 1000101000011100020000100010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCTTCA-AAGC-AAT--ATGACTCGTG-AACTTGTT--T---GCATACTT-GGGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCTGGGAGCCGGCCAC-ACCC--TGTGTGGTTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCTAATT-TATTCAGTGCGTTCTC-CTCAGTCC-GGAAACGGTTCT-GTGTGGGTGACG--T-CGTGA-TACATTATTATTCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTACGCCCGAAGCCATT-AGGTCGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACTCCAATCA--CAA-TGTCTCCTTTT-GGGGTT-GTT-GGGGAG-TGAATGTT-GGCTTCCCATGAGCA-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT-AAACC-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCTAA-TTTTTG-GACT-TCATGACCCATAT--GCATC---TTTGA-T-GCTC--ATAACGAG??????????????????????????????????????????????????????????????????
		Indigofera_trifoliata            10?1000000010110020010010100001?????????????AACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTTACAAGC-AAT--CTGACTCGTG-GACATGTT--T---GCAT-CTTT-GGGTTG-GTTTGGTGTGTG--AAAACACG-CTTGCCT-C-CC--T-CTTGGCCAGGAGGTGGCCAC-GC----TGTGTGGCCTTCTCTTAGCCTAATAACAAA-CCCCC-AGCGCTACATGCGCCAAGGAAATCTAATT-TATTCATTGCGCTCCC-GCATGCCC-GGAAACGGTGCT-GTGCGGGTAGCG--T-TGAGA-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCA--TAA-TGTCTTCTTAC-GACGTC-ATTTGAGGAG-CGAATGTT-GGCTTCCCATGAGTA-T-CATCTCATGGTTGGTTGAAAATTGAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CCT-GCCAA-ATTTAG-GACT-TCGTGACCCATAT--GCATC---GTTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGTTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_trita                 10000000000101100200?0010100001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTTA-AAGC-TAT--CTGACTCGTG-AACATGTT--T---GCTTACTTT-GGGTTG-GTTTGGAGTGTG--AAAACACG-CCTGCCT-C-CCC----AGGACTGGGAGGCGGCCAC-GC----TACGTGGTTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCGGCATGCGCCAAGGAAATCTAATT-TATTCTGTGCGCTCCC-GTACGCCC-GGAAGCGGTGCT-GTGCGGGTTGCG--T-TGAGT-TATATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCA--CAA-TGTCTCCTTAT-GGAGTC-ATC-GAGGAG-CGAATGTT-GGCTTCCCATGAGCA-T-AGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCCAG-GTTTAG-GACT-TTGTGACCCATAT--GCATC---TTTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_bemarahaensis         1000000000010110020000000110001AAGGAGAAGTCGTACCAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTGACCCGTG-AACATGTT--T---GCTTACTTT-GGGTTG-GTTTGGCATGTG--AAAACACG-CCTGCCT-C-CCC----AGGGCCGGGAGGCGGCCAC-GC----TGCGTGGTCTTCTCTCAGCCTAT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCATTGCGCTCCC-ACATGCCC-GGAAACGGTGCC-GTGCGGGTAGCG--T-TGAGA-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCAAT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAATA--CAA-CGTCTCCTTGCGGGGGTC-ATT-GCGGAG-TGAATGTT-GGCTTCCCATGAGCA-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAC-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CCT-GCCAG-GT-TAG-GACT-TCGTGACCCATAT--GCATC---TATGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_leucoclada            1000000000010110020000000110001AAGGAGAAGTGGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTGACCCGTG-AACATGTT--T---GCTTACTTC-GGGTTG-GTTTGGCGTGTG--AAAACACG-CCTGCCT-C-CCC----AGGGCTGGGAGGCGGCCAC-GC----TGCGTGGTCTTCTCTCAGCCTAT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCATTGCGCTCCC-GCATGCCC-GGAAACGGTGCC-GTGCGGGTAGCG--T-TGAGA-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAATA--CAA-CGTCTCCTTGC-GGGGTC-ATT-GCGGAG-TGAATGTT-GGCTTCCCATGAGCA-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAC-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CCT-GCCAG-GTTCAG-GACT-TCGTGACCCATAT--GCATC---TATGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_schimperi             1000000?000101100200?0010010001AAGGAGAAGTGGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTGACTCGTG-AACATGTT--T---GCTTACTTT-GGGTTG-GTTTGGAGTGTG--AAAACACG-CCTGCCT-C-CCC----AGGACTGGGAGGTAGCCAC-GC----TGCGTGGTTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCGGCATGCGCCAAGGAAATCTAATT-TATTCTGTGCGCTCCC-GTACACCC-GGAAACGGAGTT-GTGCGGGTGGCGTGT-TGAGT-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAACAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCA--CAA-TGTCTCCTTAT-GGGGTC-ATC-GAGGAG-CGAATGTT-GGCCTCCCATGAGCA-T-AGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-TCCAG-GATTAA-GACT-TTTTGACCCATAT--GCATC---TTTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_microcarpa            1001000000010110?200100?1110001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTGACTCGTG-AACATGTT--T---GCTCACTT-CGGGCTG-GTTTGGGGTGTG--AAAACACG-CCTGCCT-C-CCC----GAGGCCGAGAGGCGGCCAC-GT----CGCGTGGTCTTCTCTTAGCCATT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGCTCCC-GCATGCCC-GAAAACGGTTCT-GTGCGAGTGGCG--T-TGAGA-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTC??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????-?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Indigofera_leptocarpa            1000000000010110020000010000001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--TTGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTCTGGGGTGTG--AAAACACG-CCTGCCT-C-CCCC---AGGGCTCAGTGGCGGCCAC-GT----TGTGTGGCCGTCTCTAAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCATTGCGCTCCT-GAACGCCC-GGAAACGGTGCT-GTGCAGGTGGCG--T-TGAGT-TACACTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCA--CAA-TGTCTCCTGAT-CGATTC-ATT-GTGGAG-CGAATGTT-GGCTTCCCATGAGCA-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--GATG-----CTCGAGACCCTGTCGTGTGT-------------------GACT-CTT-TCCTT-GC-TAG-GACT-TTGTGACCCATAT--GCATC---TCTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_cordifolia            10010000000101101200100?1110001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGTTGCCTTACAAGC-AAT--CAGACTCGTG-AACATGTT--TT---CTTACTTTT-GGTTG-GTTTGGAGTGTG--TAAACACT-CCTGCCT-C-CCA----AGGGCTTAGAGGCGGCTGC-AC----TGCGTGGTCGTCTCTTAGCCTCT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCAAATT-T-TTCGATACGCTCCC-GTGTGCCC-GGAAACGGTGCT-GTGCGGGTGGCG--T-TGAG-----TCTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGCTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAACA--CAA-TGTCTCCTTAT-GGGGTC-ATT-CAGGAG-CGAATGCT-GGCTTCCCGTGAGCA-T-CGCCTCATGGTTGGTTGAAAATGAAGTCTGTGGTGG-AGCACGCCACGATTGTT--GGTGGCTGAGT-ACAAG-----CTCGAGACCC-ATCGTGCGC-------------------GATG-CTT-GCCAA-AAGGAG-GACT-TAGTGACCCACAT--GCATC---CCTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_disticha              1000000000010110020000010000001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTAACAAGC-AAT--CTGACTCGTG-AACATGTT--T---GCTTTCTT-GGGGTTG-GTTTGGAGTGTG--AAAACATG-CCTGCCT-C-CCCC---AGGGCTCGGCGGCGGCGAC-GT----TGTGTGGTCGTCTCTGAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCATTGCGCTCCC-GTATGCTC-GGAAACGGTGTT-GTACGGGTGGCG--T-TGAGT-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAACA--CAA-TGTCTCGTTAT-CGATTC-ATT-GTGGAG-CGAATGTT-GGCTTCCCATGAGCA-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGA-CCTATCGTGTGT-------------------GATT-CTT-TCCTG-G-TTAG-GACT-TTGTGACCCATAT--GCATC---TCTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_ammoxylum             1000000000010110020000000100001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--TTGACTCGCG-AACATGTT--TTTTGCTCACTTT-GGGTTG-GTCTGGGGTGTG--AGAACACG-CCTGCCT-C-CCC----AGGGCCGAGAGGCGGCCGC-GC----CACGCGGTCTTCTCCCGGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATC-CTTTCGGTGCGCTCCT-GCCTGCCC-GGAAACGGTGCT-GTGCGGGCGGCG--T-TGAGA-AACACTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGTCTGCCTGGGCGTCACACATCGTCGCTCCAACGA--CAA-TATCTCCTCGT-GGGGTC-GTT-GCGGAG-TGAATGCT-GGCTTCCCGTGAGCA-C-CGTCTCACGGTTGGTTGAAAATCAAGTCCGTGGCGG-AGTGCGCCGCGATTGTT--GGTGGTTGAGT-AAAAG-----CTCGAGGCCC-GTCGTGCGC-------------------GGCT-CTT-GCCAG-GTTTAG-GACT-TTGTGACCCATGC--GCATC---TCTGA-T-GCTC--GTAACGAGACCTC-AGGTCAG-GC-GGGACTACCCG??????????????????????????????????????
		Vaughania_cerighellii            10000000100101100210?1000100001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTGACTCGTG-AACATGTT--TT--GCTTACTCT-GGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCTTC-C-----TAGGGCTGGGAGGCGGCCAC-GC----TGCGTGGTCTTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGGGCGCTCCC-GCATGCCC-GGAAACGGTGCC-GTGCGGGATGCG--T-TGAGA-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAACA--CAA-TGTCTCCTTCT-GGGGTC-ATT-ATGGAG-CGAATGTT-GGCTTCCCATGAGCA-C-TGTCTCATGGTTGGTTGAAAATCGAGTCTGTGGTGG-AGTGCGCCGCGATTGTT--GGTGGCTGAGT--AAAG-----CTCGAGACCC-ATCGCGCGY-------------------GACT-CTT-GCCAA-GTTTAG-GACT-TCGTGACCCATAT--GCATC---TCTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Vaughania_humbertiana            10000000100101100?1011000100001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTGACTCGTG-AACATGTT--TT--GCTTACTCT-GGGTTG-GTTTGGGGTGTG--AAAACACG-CCTGCCTTC-C-----TAGGGCTGGGAGGCGGCCAC-GC----TGCGCGGTCTTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGCTCCC-GCATGCCC-GGAAACGGTGCC-GTGCGGGATGCG--T-TGAGA-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAACA--CAA-TGTCTCCTTCT-GGGGTC-ATT-ATGGAG-CGAATGTT-GGCTTCCCATGAGCA-C-TGTCTCATGGTTGGTTAAAAATCGAGTCTGTGGTGG-AGTGCGCCGCGATTGTT--GGTGGCTGAGT--AAAG-----CTCGAGACCC-ATCGCGCGT-------------------GACT-CTT-GCCAA-GTTTAG-GACT-TCGTGACCCATAT--GCATC---TCTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Vaughania_pseudocompressa        10000000100101100?0001000000001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTGACTCGCG-AACATGTT--TT--GCTTACTTT-GGGTTG-GTTTGGGGTGTG--AAAACATG-CCTGCCTTC-C-----CAGGGCTGGGAGGCGGCCAC-CC----TGCGTGGTCTTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCTAATT-TATTCAGTGCGCCCCC-GCATTCCC-GGAAACGGTGCT-GTGCGGGCTGCG--T-TGAGA-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAACCATT-AGGTCGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCA--CAA-TGTCTCCTTTT-GGGGTC-ATT-ATGGAG-TGAATGCT-GGCTTCCCATGAGCA-T-TGCCTCGTGGTTGGTTGAAAATCGAGTCTGTGGTGG-AGTGCACCGCGATCGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCCAG-GTTTAG-GACT-TTGTGACCCATAT--GCATCATCTCTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA??????????????????????????????????
		Vaughania_depauperata            1000000010010110021011000?00001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTGACTCGTG-AACATGTT--TT--GCTTACTTT-GGGTTG-GTTTGGGGTGTG--AAAACACA-CCTGCCTCC-C-----TAGGGCTGGAAGGCGGCCAC-GC----TGCGTGGTCTTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGCTCCC-GCATGCCC-GGAAACGGTGCT-GTGCGGGATGCG--T-TGAGA-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAACA--CAA-TGTCTCCTTCT-GGGGTC-ATT-ATGGAG-TGAATGTT-GGCTTCCCATGAGCA-C-TGTCTCATGGTTGGTTAAAAATCAAGTCTGTGGTGG-AGTGCATCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CTT-GCCAA-GTTTAG-GACT-TTGTGACCCATAT--GCATC---TCTGA-T-GCTC--ATAATGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Vaughania_mahafalensis           1000000010011110021011000100001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--CTGACTCGTG-AACATGTT--TT--GCTTACTCT-GGGTTG-GTTTGGGGTGTG--AAAACACG-CGTGCCTTC-C-----TAGGGCTGGGAGACGGCCAC-GC----TGCGCGGTCTTCTCTCGGCCTTT-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCTAATT-TATTCAGTGCGCTCCC-GCATGCCC-GGAAACGGTGCC-GTGCGGGATGCG--T-TGAGA-TACATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAACA--CAA-TGTCTCCTTCT-GGGGTC-ATT-ATGGAG-CGAATGTT-GGCTTCCCATGAGCA-C-TGTCTCATGGTTGGTTAAAAATCGAGTCTGTGGTGG-AGTGCGCCGCGATTGTT--GGTGGCTGAGT--AAAG-----CTCGAGACCC-ATCGCGCGT-------------------GACT-CTT-GCCAA-GTTTAG-GACT-TCGTGACCCATAT--GCATC---TCTGA-T-GCTC--ATAATGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_koreana               1000000000011110120000100010001??????????????ACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTGTTCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-CCCC----GGCGCAGGAGGCGGCCAT-GC----TTCATGGCTGTCTCTT-GCCTTT-AACAAA-CCCAC-GGCGCTGCATGCG-CAAGGAAATCTAATT-CATTCAATGAGCTCTT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TATACTA---TTCTAAA-TGACTCTCGGCAACGGATATCTTCGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGCGT-------------------GGCT-CTT-GC-AG-GTTTCA-GACT-TTGTGACCCATAT--GCATC--CTT-GA-T-GCTC--ATAACGAGACC-C-AGGTCAG-GC-GGGGCTACC-GCTGA-GTT-AAGACT???????????????????????
		Indigofera_grandiflora           1000000000011110?20000100010001??????????????ACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTGTTCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-CCCC----GGCGCAGGAGGCRGCCAT-GC----TTCATGGCTGTCTCTT-GCCTTT-AACAAA-CCCAC-GGCGCTGCATGCG-CAAGGAAATCTAATT-CATTCAATGAGCTCYT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TATACTA---TTCTAAA-TGACTCTCGGCAACGGATATCTTCGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-TGTATGCTTGGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGCGT-------------------GGCT-CTT-GC-AG-GTTTCA-GACT-TTGTGACCCATAT--GCATC--CTT-GA-T-GCTC--ATAACGAGACC-C-AGGTCAG-GC-GGGGCTACC-GCTGA-GTT-AAGACT???????????????????????
		Indigofera_venulosa              1000000000011110?20000100010001??????????????ACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTGTTCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTCGGCGTGTG--AAAACACG-ACTGCCT-C-CCC----TGGCGCAGGAGGCGGCCAT-GC----TTCATGGCTGTCTCTT-GCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTCCTTGCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTATTA---TTCGAAA-TGACTCTCGGCAACGGATATCTTCGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-TGTATGCT--GCTTCCCATGAGCT-T--GTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTACACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGCGT-------------------GGCT-CTT-GC-AG-GTTTCA-GACT-TTGTGACCCATTT--GCATC--C--TGA-T-GCTC--ATAACGAGACC-C-AGGTCAG-GC-GGGGCTACC-GCTGA-GTT-AAGACT???????????????????????
		Indigofera_decora                1000000000011110?20000100010001??????????????????GGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTGTTCGATGCCTC--AAGC-AAT--CCGACTCGTG-AAC-TGTT--T---GCTTACTT-GGGGTTG-GTTCGGCGTGTG--AAAACACG-ACTGCCT-R-CCC----TGGCGCAGGAGGCGGCCAT-GC----TTCATGGCTGTCTCTT-GCCTTT-AACAAA-CCCAC-GGCGCTGCATGCG-CAAGGAAATCTAATT-CATTCAATGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTAT-A---TTCTAAA-TGACTCTCGGCAACGGATATCTTCGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-TGTATGCT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTACACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGCGT-------------------GGCT-CTT-GC-AG-GTTTCA-GACT-TTRTGACCCATAT--GCATC--CTT-GA-T-GCTC--ATAACGAGACC-C-AGGTCAG-GC-GGGGCTACC-GCTGA-GTT-A????????????????????????????
		Indigofera_kirilowii             1000000000011110120000100010001??????????????ACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTGTTCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGCTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-CCCC----GGCGCAGGAGGCGGCCAT-GC----TTCATGGCTGTCTCTT-GCCTTT-AACAAA-CC-AC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTCTT-GCCAGCCCGGGAAACGGTGCT-GCGCGGGTGGCT--T-CGTGA-TCTATTA----TCAAAA-TGACTCTCGGCAACGGATATCTTCGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGCGT-------------------GGCT-CTT-GC-AG-GTTTCA-GACT-TTGTGACCCATAT--GCATC--CTT-GA-T-GCTC--ATAACGAGACC-C-AGGTCAG-GC-GGGGCTACC-GCTGA-GTT-AAGACT???????????????????????
		Indigofera_varia                 10000000000101100200?0100010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACATG-ACTGCCA-C-CCC----TGGCACGGGGGGCAGCCAT-GC----TCTGTGGCTGTCTCTTGGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTCCT-TGTAGCCC-GGAAACGGTGCT-GCACGGGTGGCT--T-TGTGA-TCTATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGAGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCAAT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACGCATCGTTGCTCCAATAC--CAA-TGTCTCCTTTT-AGGGCC-GTT-GGGGAG-TGCATGTT-GGCTTCCCATGAGCT-G-TGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTACATCGCGATTATTT-GGTGGTTGAG---TAAT----GCTCGAGACCG-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTTA-GACT-TTGTGACCCATAT--GCATC--CTT-GA-T-GCTC--ATAACGAG------------------------------------------------------------------
		Indigofera_braamtonyi            1000000000011110020000100010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-CCC----TGGCACGAGAGGGGGTCAC-GC----TCTGTGGCTGTCTCTCAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTTCT-GCCAGCCC-GGAAACGGTGCTTGCGCGGGTGGCT--T-TGTGA-TCTATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-TCTATGTT-GGCTTCCCACGAGCT-T-CGTCTCGTGGTAGGTTGAAAATCAAGTCTGTGGTGGGAGCGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCA-GACT-TTGTGACCCATAT--GCATC--CTT-GA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_jucunda               1000000000011110120000100010001AAGGAGAAGTCGTAACAAGGTTTC-GTAGGT---GAACCTGCGAAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAGCACG-ACTGTCT-C-CCCC----GGCACGGGAGGCGGCCGC-GT----TCCGTGGCTGTCTCTCGGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GTGCGGGTGGCT--T-TGTGA-TCTATTA---TTCAAAA-TGACTCTTGGCAACGGATTTCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAAAGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-CGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCGTGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATAATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCG-GA-T-TTGTGACCCATAT--GCATC--CTT-GA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_arrecta               1000000000010111020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--TCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAATACG-ACTGCCT-C-CCC----TGGCACGGGAGGCGGCCAC-GC----TCCGTGGCTGTCTCCCTGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAATGAGCTCCT-GCCAGCCC-GGAAACGGTGTT-GCGCGGGTGGCT--T-TGTGA-TCTATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCA-GACT-TTGTGACCCATAT--GCATC--CTT-GA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-ATTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_natalensis            1000000000011110020000100010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-CC-----TGGCACGGGAGGGGGCCAC-GC----TCTGTGGCTGTCTCTCAGCCTTT-AACAAA-CCCAC-AGCGCTGCATGCGCCAAGGAAATCTAATT-CATTCAACGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTATTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCAGATCTTGCATCGATGAAGAACGTAGCTAAATGCTATACTTGGTGTGAATTGCAAAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGATGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GGGGTT-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTAGTTGAAAATCAAGTCTGTGGTGGGAGCGCACCGCCATTATTT-GGTGGTTGAGT-AAAAG-----CTCGAAACCA-ATCCTGCAT-------------------GGCT-CTT-GCAAG-GTTTCA-CACT-TTGTGACCCATAT--GCATG--CTT-GA-T-GCTCTCATAACGAGATCTC-ATGTCAG-GCCGGGGCTACCACCTGA-GTTTAAGCATATCAATGAGCGGAGGAAAAGAAA
		Indigofera_suffruticosa          1000000000010111020000000010001????????????????????????????????????????????????????CATTG-TCGATGCCTC--AAGA-AAC--CCGACTCGCG-AACATGTT--T---GCTTACTC-GGGGTTG-GCTTGGCGCGTG--AAAACGCG-ACGGCCT-C-CCC----TGGCACGGGAGACGGCCAC-GC----TCCGTGGTTGTCTCTCAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-TGTTCAACGAGCTCCT-GCCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTGTTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-CGTCTCATTTT-GGGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-C-CGTCTCATGGTTGGTTGAAAACCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGTAAAAAG-----CTCGAAGCCA-ATCGTGCGT-------------------GGCT-CTT-GCGAG-TTTTCG-GACT-TTGTGACCCATAT--GCATC--CTT-GA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA??????????????????????????????????
		Indigofera_tristis               1000000000011111020010000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--GAAC-CAT--CCGACTCGCG-AACATGTT--T---GATTACTTGAGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-CCC-----GGCACGGGAGGCGGCCAT-TC----TCCGTGGCTGTCTCTTGGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGTCAAGGAAATCTTATT-CATTCAGTGAGCTCCT-GGCACCCC-GGAAACGGTGCT-CT-CGGGTGGCT--T-TGTGA-TCAATTA---TTCGAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCCATACTCGGTGTGAATTGCAGAATCCCGTGTACCATCGAGCCTTTGAACGCAGGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GTGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-T-TGTCTCATGGTTGGTTGAAAATCAAGTCCGCTGTGGGAGAGCACCACGATTATTT-GGTGGTTGAG--ACAAT-----CGTGCGACCA-ATCGTGCGT-------------------GGCT-CTT-GCAAT-GTTTCG-GACT-TTGTGACCCGTATATGCATC--CTTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGTTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_zeyheri               1000000000011111020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--GAAC-CAT--CCGACTCGCG-AACACGTT--T---GCTTACTTTGGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-CCC-----GGCACGGGAGGCGGCCAC-GC----TCCGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGTCAAGGAAATCTTATT-CATTCAGTGAGCTCCT-GGCAGCCC-GGTAACGGTGCT-CT-CGGGTGGCT--T-TGTGA-TCAATTA---TTCGAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTATCCTTTT-GTGGTC-GTT-GGGGAG-CGTATGTT-GGCTTCCCATGAGCT-T-TGTCTCATGGTTGGTTGAAAATCAAGTCCGCTGTGGGAGAGCACCACGATTATTT-GGTGGTTGAG--ACAAT-----CGTGCGACCA-ATCGTGCGT-------------------GGCT-CTT-GCAAT-GTTTCG-GACT-TTGTGACCCGTATATGCATC--CTTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGTTACCCGCTGA-GTTTAAGCATATCAATTAGCGGAGGAAAAGAAA
		Indigofera_gleichenoides         1000000000011111020000000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--GAAC-CAT--CCGACTCGCG-AACACGTT--T---GCTTACTTTGGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-CCC-----GGCACGGGAGGCGGCCAC-GC----TCCGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGTCAAGGAAATCTTATT-CATTCAGTGAGCTCCT-GGCAGCCC-GGTAACGGTGCT-CT-CGGGTGGCT--T-TGTGA-TCAATTA---TTCGAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTATCCTTTT-GTGGTC-GTT-GGGGAG-CGTATGTT-GGCTTCCCATGAGCT-T-TGTCTCATGGTTGGCTGAAAATCAAGTCCGCTGTGGGAGAGCACCACGATTATTT-GGTGGTTGAG--ACAAT-----CGTGCGACCA-ATCGTGCGT-------------------GGCT-CTT-GCAAT-GTTTCG-GACT-TTGTGACCCGTATATGCATC--CTTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGTTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_frondosa              1000000000011111020010000010001???????????????????????????????????????????????????????TG-TCGATGCCTC--GAAC-CAT--CCGACTCGCG-AACATGTT--T---GATTACTTGAGGGTTG-GTTTGGCGTGTG--AAAACACG-ACTGCCT-C-CCC-----GGCACGG-AGGCGCCCAT-TC----TCCGTGGCTGTCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGTCAAGGAAATCTTATT-CATTCAGTGAGCTCCT-GGCAGCCC-GGAAACGGTGCT-CT-CGGGTGGCT--T-TGTGA-TCAATTA---TTCGAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TGTCTCCTTTT-GTGGTC-GTT-GGGGAG-TGTATGTT-GGCTTCCCATGAGCT-C-TGTCTCATGGTTGGTTGAAAATCAAGTCCGCTGTGGGAGAGCACCACGATTATTT-GGTGGTTGAG--ACAAT-----CGTGCGACCA-ATCGTGCGT-------------------GGCT-CTT-GCAAT-GTTTCG-GACT-TTGTGACCCGTATATGCATC--CTTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGTTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_sanguinea             1000000000010110020010000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--ACGACCCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTTGGCGTGTG--AAAACACG-CCTGCCT-C-CCCCC---GGCATGGGAGGCGGCCAC-GC----TCTGTGGCTGTCTCCCAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCCAATT-TATTCGATGAGCTCCT-GGCAGCCC-GGAAACGGTGTT-GCGCGGGTGGCT--T-TGTGA-TCTATTA---TTCCAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAACGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAATTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACATATCGCTGCTCCTATGC--CAA-CTTCTCCTTCTATGGGTC-GTT-GGGGAGCTGGACGTTCGGCTTCCCGTGAGCC-T-TGTCTCACGGTTGGTTGACAATCAAGTGTGTGGTGGGAGCGCACCGCGATTATTT-GGTGGTTGAGT--AATG-----CTCGAGACCA-ATCGTGGGT-------------------GGCT-CCT-GCAAG-ATAACG-GACT-TTGTGACCCATAT--GCATC---TTTGG-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_stenophylla           1000000000010110020010000010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--ACGACCCGCG-AACATGTT--T---GCTTACTT-GGGGTTG-GCTCGGTGTGTG--AAAGCACG-CCTGCCT-C-CCCCCC--GGCACGGGAGGCGGCCAC-GC----TCTGTGGCTGTCTCTCAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-TATTCGGTTAGCTCCT-GGCAGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-AGTGA-TCTATTATTTATCCAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATC???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????-?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Indigofera_longimucronata        1000000000010110020010100010001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTC--AAGC-AAT--CAGACCCGTG-AACATGTT--T---GCATACTT-GGGGTTG-G-TTCGGGTGTGTGAAAACACA-CCCGTCTGC-CCC-----GGCATGGGAGGCAACCGT-GC----ATTGCGGTTGTCTCTTAGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-TATTTGACGAGCTCCT-GACGGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTATTA---TTCAGAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-TTTCTCCTTTT-GGGGTC-ATT-GGGGAG-TGGATGCT-GGCTTCCCGTGAGCA-C-CGTCTCACGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGTAAAAAG-----CTCGAGACCA-ATCGTTGGT-------------------GACT-CTC-GCAAG-ATTATG-GACT-TTGTGACCCATAT--GCATC---TTTGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_tetrasperma           1?00000000010110020010000?10001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCAAAAGC-AAT--CTAACTCGTG-AACACGTT--TT--GCTCACTT-GGGGTTG-GGACGGGGTGTG--AAAACACG-CCTACCT-C-CCC-----ACGACTAGCAGCGGCC---------TGCGTGGCCGTCTCCTAGTCTCT-AACAAA-CCCCC-GGCGCAACATGCGTCAAGGAAATCAAACT-TATTCAGTGCGCTCCT-ACTAGCCC-GGGAACGGTGCT-CTGTGGGTGTCG--T-CGTGA-TGCATTA---TTCAATA-CGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTC??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????-?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Indigofera_paniculata            110000000001011?020010000?10001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCAAAAGC-AAT--CTAACTCGTG-AACACGTT--TT--GCTCACTT-GGGGTTG-GCACGGGGTGTG--AAAACACG-CCTACCT-C-CCC-----ACGACTAGTAGCGGCC---------TGCGTGGCTGTCTCCTAGTCTTT-AACAAA-CCCCC-GGCGCAACATGCGTCAAGGAAATCAAACT-TATTCAGTGCGCTCCT-ACTAGCCC-GGAAACGGTGCT-CTGTGGGTGTCG--T-CGTGA-TGCATTA---TTCAATA-CGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCC--AAAATGT----------------------GGAG-CGAATGTT-GGCTTTCCATGAGCC-C-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-AGTGCACCGCGATTGTT--GGTGGTTGAGT--ATGT-----CTCGAGGCCCTATCGTGTGT-------------------GGCT-CTA-TCCAT-CTTGCA-GGCT-TTGTGACTCATAT--GCATC---TTTGG-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_vohemarensis          10000000001101100200?0000?10001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCAAAAGC-AAT--CTAACTCGTG-AACATGTT--T---GCTCACTT-GGGGCTG-GCATGGGGTGTG--AACACACG-CCTGCCT-C-CCCC---AGGGCTGGGAGTTGG-----CC----TGCGTGGCTGTCTCTTAGTCGTT-AACAAA-CCCAC-GGCGCTACATGCGCCAAGGAAATCAAATT-TATTCAGTGCGCCCCT-ACTAGCCC-GGAAACGGTGCT-ATGTGGGCGGTG--T-CGTGA-TGCATTA---TTCAATA-CGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCC--CAA-TGT----------------------GGAG-TGAATGTT-GGCTTCCCATGAGCT-T-CGTCTCATGGTTGGTTGAAAAGCAAGTCTGTGGTGG-AGTGCATCGCGATTGTT--GGTGGTTGAGT--TATG-----CTCGAGGCCCTGTCGTGTGT-------------------GGCT-CTA-GCCAT-GATCTA-GACT-TTGTGACCCATAC--GCATCATCTTTGG-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_strobilifera          1100000100010110020010000110001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCGAAATC-AAT--TAAACTCGTG-AACATGTT--TT--GCTCACTT-GGGGCTG-GCATGGGGTGTG--AAAACTCG-CCTACCT-C-CCC----AAGGCTTGGAGGTGGCCAC-AC----TGCGTGGCTGTCTCCTAGTCTTT-AACGAA-CCCCC-GGCGCTGCATGCGCCAAGGAAATCAAATT-TATTTAGCACGCTCCT-GCTAGCCC-GGAAACGGTGGT------------G--T-TGTGA-TGCGTAA---TTCAACA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCTTATCC--CAA-TGTCTCAGTCT-AGGGTC-ATT-GGGGAG-CGAATGTT-GACTTCCCATGAGTG-T-CGTCTCATGGTTGGTTGAAAATCAAGTCTGTGGTGG-A-TTCACCGCGATTGTT--GGTGGTTGAGT--AATG-----CTCGAGGCCTTATCGTGTGT-------------------AGAT-CTA-TCCGT-GAGCTA-GACT-T-GTGACCCATAT--GCATC---TTTGG-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigofera_kirkii                1000000100010110020010000110001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCAAAAGC-AAT--CTAACCCGTG-AACGTGTT--TT--GCTCTCTT-GGGGTTG-GCATGGGGTGTG--AAAACACG-CCTACCT-C-CCC----AGGGCTGGGAGGAGGCCAC-AC----TGCGTGGCTGTCTCTTAGTCTTT-AACAAAACCCCC-GGCGCTGCATGCGCCAAGGAAATCAGATT-TATTCAGTGCCGTCCT-GCTGGCCC-GGAAGCGGTGCT-GCGTGGGCGGTG--T-TGCGA-TGCATTA---TTCAATA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATCC--CAG-TGTCTCAGTCT-AGGGTCACCG-GGGGAG-CTAATGTT-GGCTTCCCATGAGCA-T-CGTCTCATGGTTGGTTGAAAATCAAGTTTGTGGTGT-GGTGCACCGCGATTGTT--GGTGGTTGAGT--AAAG-----CTCGAGGCCCTATCGTGCGT-------------------GGCT-CCA-TCCAT-GATCCA-GACT-TTGTGACCCATAC--GCATC---TTTGG-T-GCTC--ATGATGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Cyamopsis_dentata                1000000000010100010101000000001???????AGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AGT--CCGACTCGTG-AACTAGTT--T---GCTGATTT-AGGGTTG-GTTTGGGGTGTGTCAGAACACG-CCAGCCTCT-CCC---TTGGGTTTTGAGTTGGCCAC-CT----CGTGTGACTCTCTCTTAGCCTTT-AACAAA-CCCCC-GACGCTACACGCGTCAAGGAAATCTTAAT-TCTTCT-TGCGCTCCT-GCCAGCC--GGCAACGGTGTT-GTGCAGGTTGCG--T-TGTGA-TACACGA---ATCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGTCACT-AGGCTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCCTAACTC--CAA-AGTCTCCTTC--GGAGTC-GT--GAGGGG-CGAATGTT-GGCTTCCCATGAGCG-T-TGTCTCATGGTTGGTTGAAAATTGAGTCCGTGGCGG-AGGATACCACGATTGAT--GGTGGTTGAGTAAAAAG-----CTCGAGACCC-ATCGTCGGT-------------------GACT-CCA----CG-TTT-TG-GACT-TTGTAACCCACAT--GCATC---TCTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Cyamopsis_tetragonoloba          100000000001010001010?000000001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AGT--CCGACCCGTG-AACTTGTT--TT--GCTTATTT-AGGGTTG-GTTTGGGGCGTGTCAAAACACG-CCGACCT-T-CCT---TT-GGTTGGGAGTTGTCTGC-CT----TGCGTGGCTTTCTCTTAGCCTTT-AACAAA-CCCACCGGCGCTACACGCGCCAAGGAAACTTAACT--CTTCTGTGCGCCCTT-GCCAGCCC-GGTAACGGTGCT-GTGTAGGTTGCG--T-TTAGA-TACATGA---ATCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGCCGAGGGCACGCCTGCCTGGGCGTCGCGCGTCGTTGCCCTAACTC--GGA-CGTCTCATTT--GGTGTC-GTT-GAGTGG-CGAATGTT-GGCTTCCCACGAGCG-T-TGCCTCATGGTTGGTTGAAATTCGAGTCCGTGGTGG-AGGATGCCACGATTGATATGGTGGTTGAGTAATTAG-----CTCGAGACCC-ATCGTGAGC-------------------GACT-CCA-TCTTG-TTT-TG-GACT-CTTTGACCCACATGAGCATC---TCCGA-T-GCTC--GTTACGAGACCTC-AGGTCAG-AC-GGGGTTACCCGCTGA-GTTTAAGCATATCAATAAGCGGCGGAAAAGAAA
		Cyamopsis_senegalensis           10000000000101000?0?00000000001????????????????????TTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AGT--CCGACTCGTG-AACTAGTT--T---GCTTATTT-AGGGTTG-GTTTGGGGTGCGTCAAAACACG-CCAGCCT-C-CCT----TGGGTTTTGAGTTGGCCAT-CT----CGTGTGGCTCTCTCTTAGCCTAT-AACAAA-CCCCC-GACGCTACACGCGTCAAGGAAATCTTAAT-TCTTCTTTGCGCTCTT-GCCAGCC--GGTCACGGTCTT-GTGCAGGTTGCG--T-TGTGA-TACATGA---ATCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGCTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCCTAACTC--CAA-AGTCTCCTTT--GGAGTCTTTT-GAGGGG-CGAATGTT-GGCTTCCCATGAGTG-T-TGCCTCATGGTTGGTTGAAAATTGAGTCTGTGGCGG-AGGATACCACGATTGAT--GGTGGTTGAGTAAAAAG-----CTCGAGACCC-ATCGTGAGT-------------------GACT-TCG----TG-TTTTGG-GACT-TTGTAACCCACATG-GCATC---TCTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAA???????????????????????????
		Indigastrum_argyraeum            1000000000010100010101000001?01AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AAT--TTGACCCGTG-AACTTGTT--T---GCTAATTT-AGGGTTTGGATTGCAGTGTG--AAGACACG-CAACCCTTA-CC----TTCGGCTAGGATGTTGTTGC-CT----CGTGTGACT--CTCTTAGCCCTA-AACAAA-CCCCC-GGCGCCACACGCGCCAAGGAAATCTAAA---CTTCAGTGCACTCCT-CTCAGCCC-GGAAGCGGTGCT-GAT-AGGTTGTG--T-TGCGA-ATCATTA---ATCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGCTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTTCCCCAATTC--CAA-CTATTCCTTA--GGAGTC-GTT-GAGGGG-TGAATGTT-GGCTTCCCATGAGCA-T-GGTCTCATGGTTAGCTGAAAATCTAGTCCGTGGTGG-ATGATGCCACGATTGAT--GGTGGTTGAGT--GTCC-----CTCGAGACCC-ATCGTGAGT-------------------GTCT-CCA-TC-CG-TTTGTG-GACT-TCATGACCCATAT--GCATC---TCAGA-T-GCTC--TTAACGAGACTTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Indigastrum_costatum             1000000000010100010101000001?01AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AGT--CGGACCCGTG-AACATGTT--T---GCTAATTC-GGGCAGAGGTGATTGTCGTGA-AAGACACT-TCATCCCTGTCCC----TCGGTTGAGAGGTGGCCAC-CC----AGTGTGACTGTCTCTTAGCCTTT-AACAAA-CCCCC-GGCGCCACACGCGCCAAGGAAACGTAAA---CTTCTTTGCACTCGT-ATGTG-CC-GGCAACGGTGCT-GGT-CCGATGTG----TGCGA-ATATCGA---ATCTAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCATT-AGGCTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACCCCAATTC--CAA-TGTCTCCTTC--GGAGTC-GTT-GAGGGG-TGAATGTT-GGCTTCCCATGAGCAAT-AGTCTCATGGTTAGTTGAATTTCTAGTCCGTGGTGG-ATGACGCCACGATTGAT--TGTGGTTGATT--GACC-----CTCGATACCC-ATCGTGAGA-------------------GTCT-CCA-CCC-G-TCTCTG-GACT-TCACGACCCATGT--GCATC---TAAGA-T-GCTC--ACAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Microcharis_galpinii             1000000000010100010101000001111AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTAACAAGC-AAT--TAGACCCGTG-AACTTGTT--T---GCTAATCT-AGGGTTT-CGTTGAAGTGTG--AAAACACG-CCGGCCCAA-CT----TTGGGCAGGGAGGTGGCCACACT----TGTGTGCGTCCCTCTCAGCCTTT-AACAAA-CCCCC-GGCACTACACGTGCCAAGGAAACCTAAT---CTTCATTGCACTCCT-GCCAGCCC-GGAAACGGTGCT-GTGCAGGCGGTG--T-TGAGTAA-CAAGA---ATCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-CGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCCC-------CAA-CTTCTCCTTC--GGAGCC-GTT-GAGGGG-CGAATGTT-GGCTTCCCATGAGCA-T-TGCCTCATGGTTGGTTGAAAATCGAGTCCGTGGTGG-AGGATGCCACGATTGAT--GGTGGTTGAGT--GGAG-----CTCGAGACCC-ATCGTGAGC-------------------GACT-TCA-TCGTG-CATC-G-GACT-TTGTGACCCAAAC--GCATC---TCGGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCCCTGA-ATTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Microcharis_latifolia            1000000000010100010101000001111AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTAACAAGC-AAT--TAGACCCGCG-AACTCGTT--T---GCTAATCT-AAGGTTG-CGTTGGGGTGTG--AAGACACG-CCAGCCCAA-CC----TTGGGTTGGGAGGTGGCCAC-CT----CGTGTGCG-ACCTCTTAGCCTTT-AACAAA-CCCCC-GGCACTACACGTGCCAAGGAAACCTAAT---CTTCATTGCACTCCT-GCTAGCCC-GGCAACGGTGCT-GTGCAGGCGGTG--T-TGAGAAAACACAA---ATCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-CGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCC--------CAA-CGTCTCCTTC--GGAGTC-GTC-GAGGGG-TGAATGTT-GGCTTCCCATGAGCA-T-TGCCTCATGGTTGGTTGAAAATCAAGTCCGTGGTGG-AGGACGCCACGATTGAT--GGTGGTTGAGT--GGAT-----CTCGAGACCC-ATCGTGAGT-------------------GACT-CCA-TCGCG-CATT-G-GACT-TTGTGACCCAAAT--GCATC---TCACA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-ATTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Phylloxylon_spinosa              10000000000010000100001000?0001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-CCGATGCCTCACAAGC-AGT--CCGACTCGTG-AACGTGTT--T---GCTTATTC-GGGGTTG-GCTCGGGGCCTC--AAGAGGCG-CCCGCCT-C-CCT----CGGGTTGGGAGCCGGCCAT-CT----CGTGTGGCTGCCTCTTAGCTTCC-AACAAA-CCCCC-GGCGATACATGCGCCAAGGAAATCAAAAT-TCTTCAGCGCGCTCCT-GCCGGCCC-GGAAACGGTGCT-GTGCGGGCTGCG--T-TGCGA-TACGCGA---ATCAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGATGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCCCAACGC--CAA-TGTATCCTTC--GGGATC-GTT-GGGGGG-CGAATGCT-GGCTTCCCATGAGCA-T-TGCCTCATGGTTGGTTGAAAATCGAGTCCATGGTGG-AGTGCACCACGGTCGAT--GGTGGTTGAGT--AGAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CCA-TC-AG-GTTATG-GGCTTTAGTGACCCACGC--GCATC---TCTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Phylloxylon_perrieri             100000000000?0000100001000?0001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AGT--CCGACTCGCG-AACATGTT--T---GCTTATTT-GGGGTTG-GCTTGGGGTCTC--AAAAGGCG-CCAGCCT-C-CCT----CGGGTTGGGAGGCGGCCAT-CT----CGCGTGGCTGTCTCTTAGCTTCC-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCAAAAT-TCTTCAGCGCGCTCCC-GCCGGCCC-GGAAACGGTGCT-GCGCGGGTTGCG--T-CGCGA-TACACGA---ATCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGATGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCCCAATGC--CAA-TGTATCCTTT--GGGATC-GTT-GCGGGG-CGAATGTT-GGCTTCCCATGAGCA-T-TGCCTCATGGTTGGTTGAAAATCGAGTCCATGGCGG-AGTGTACCACGGTTGAT--GGTGGTTGAGT--AGAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CCA-TC-AG-TTTTTG-GGCT-TCGTGACCCATGC--GCATC---TCCGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Phylloxylon_xylophylloides       10000000000010000100001000?0001AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AGT--CCGACTCGCG-AACATGTT--T---GCTTATTT-GGGGTTG-GCTCGGGGTCTG--AAAAGGCG-CCAGCCT-C-CCT----CGGGTTGGAAGGCGGCCAT-CT----CGCGTGGCTGTCTCTTAGCTTCC-AACAAA-CCCCC-GGCGCTACATGCGCCAAGGAAATCAAAAT-TCTTCAGCGCGCTCCC-GCCGGCCC-GGAAACGGTGCT-GCGCGGGTTGCG--T-TGCGA-TACACGA---ATCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGATGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCCCAATGC--CAA-TGCATCCTTT--GGGATC-GTT-GCGGGG-CGAATGTT-GGCTTCCCATGAGCA-T-TGCCTCATGGTTGGTTGAAAATCGAGTCCATGGCGG-AGTGTACCACGGTTGAT--GGTGGTTGAGT--AGAG-----CTCGAGACCC-ATCGTGCGT-------------------GACT-CCA-TC-AG-TTTTTG-GGCT-TCGTGACCCATGC--GCATC---TCTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Rhynchotropis_poggei2            1000000000010100010?01000001111AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TAGATGCCTCACGAGC-AAT--TAGACCTGTG-AACTTGTT--T---GCCAATCA-TGGTTTGGGCTTGGGGTGCT--GCGGCACG-CCATCCAGC-CA-----TGGGTTGGG-GGAAGTCAT-CT----CGTGTGAATATCCCCTATCCTTT-AACAAA-CCCCC-GGCACTACACGTGCCAAGGAAACCTATA---CTTCATTGCACTCCT-GTCAGCCC-GGCAACGGTGTT-GTGCAGGTAGTG--T-CGCGA-AAATTTA---ATCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAACCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCCTAATAC--CAA-TGTCTCCGTT--GGATAC-ATT-GCGGGG-CGAATGCT-GGCTTCCCGTGATCG-T-TGTCTCACGGTTGGCTGAAAATTGAGTCTGTGGTGG-GGGTCACCACGATTGAT--GGTGGTTGAGT--GAAG-----CTCGAGACCC-ATCGTGAGT-------------------GTCT-TCA-TCATA--TATCG-GACT-TTGTGACCCATAT--GCATC---CCGGA-T-GCTC--ATTACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Rhynchotropis_poggei             1000000000010100010?01000001111AAGGAGAAGTCGTAACAAGGTTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACGAGC-AAT--TAGACCTGTG-AACTTGTT--T---GCCAATCA-TGGTTTGGGCTTGGGGTGCT--GTGGCACG-CCATCCAGC-CA-----TGGGTTGGG-GGAAGTCAT-CT----CGTGTGAATATCCCCTATCCTTT-AACAAA-TCCCC-GGCACTACACGTGCCAAGGAAACCTATA---CTTCATTGCACTCCT-GTCAGCTC-GGCAACGGTGTT-GTGCAGGTAGTG--T-CGCGA-AAATTTA---ATCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAACCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCCCAATAC--CAA-TGTCTCCGTT--GGATAC-ATT-GCGGGG-CGAATGCT-GGCTTCCCGTGATCG-T-TGTCTCACGGTTGGCTGAAAATTGAGTCTGTGGTGG-GGGTCACCACGATTGAT--GGTGGTTGAGT--GAAG-----CTCGAGACCC-ATCGTGAGT-------------------GTCT-TCC-TC-AT-ATATCG-GACT-TTGTGACCCATAT--GCATC---CCGGA-T-GCTC--ATTACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAATAAGCGGAGGAAAAGAAA
		Dalbergiella_nyassae             0000000000001000000000000000000????????????????????TTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTAACAAGT-AGT--TTGACCTGTG-AATTTGTT--TT--ACTACCTA--GGGTTG-TGTTGGGGTGTT--CAACATCT-CAATCTCCCTTGC---GTTAGGAGGGGGTCATGCCC-------TGCGTGGCTTCCTTTTAGCGA-AAAACAAA-CCCT--GGCGCTTCGTGTGCCAAGGAATTTATAAT-TGTTCAA-GCGCTCTT-GTGGACCC-GGAGACGGTGCT--CCTATGGGAGT-TGTTGTGA-CACATGA---TACAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCCAATTGC--CAA-TGCCTCACATT-AGGTATTTGA-GCAGGG-TGAATGTT-GGCTTCCCGCGAGCA-T-TGTATCGTGGTTGGTTGAAAATCGAGTCTATGGTGG-AGGGTGCCATGATATAT--GGTGGTTGAGT--GATG-----CTCGAGGCCCAATCATGTGG-------------------AACT-CTC-TGTCG-GGTTTG-GACT-ATGTGACCCAAAT--GCGTCT--TTTGAAC-GCTC--CTAATGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAA???????????????????????????
		Hypocalyptus_sophoroides         0000000000001000000000100000001????????????????????????????????????????????????????????????????????????????????????????????????????GTT-----ATAT----GGTGT-GGATGGGGTGTT--TCACACA--CCAAC-TGCTCTCAG-GTTGGGAGG----TGCCCATTATAT---GCGGCG-T-TCTCTTTAACCAAACACAAA-CCCC--GGCGCTAAATGCGTCAAGGAACTCGAATTTTGTTCA-TTGCGCCCCTACGGACCCCGGAAACGGTGAT-CGTGCGG-GTG--CTGTTGTAACACAGCA---AACTAAAATGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGCCGAGGGCACGTCTGCCTGGGTGTCACACATCGTTACCCCTATCC--CAA-TGCCTAGTGTT-TGGTAT-AGA-GCGGGG-TGAATGTT-GGCTTCCCGTGCGAA-T-CTTCTCACGGTTGGTTGAAATTTGAGTCTATGGTAG-AGTGTACCATGATAGAT--GGTGGTTGAGT--AAAT-----CTCGAGACCA-ATCGTGCGT-------------------GTCT-CTC-TGCCG-GGTAACGGACT-CTGTGACCCGTTT--GCGTCCT-CTGAA-C-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGAGCTACC????????????????????????????????????????
		Hypocalyptus_coluteoides         0000000000001000000000100000001????????????????????????????????????????????AAG--GATCATTG-TCGATGCCTCACAAGC-AAT--GCAACCTGTG-AATTTGTTTGTC-----TATAT-GGAGTGG---AGGGGGTGTT--TCACACA--CCAAC-TGCTCTCAG-GTTGGGAGGG---TGCCCATTTTA-----TGCGGTGTTCTCTTTAACCAAACACAAA-CCCC--GGCGCTAAATGCGTCAAGGAACTGGAATT-TGTTCATTTGGGCCCCTACGGACCCCGGAAACGGTGAT--CGTGCGGGTGC--TGTTGTAACACACTA---ATCTAAAATGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGCTGAGGGCACGTCTGCCTGGGTGTCACACATCGTTACCCCTATCC--CAA-TGCCTAGTGTT-TGGTAT-AGA-GCTGGG-TGAATGTT-GGCTTCCCGTGCGAG-T-CTTCTCACGGTTGGTTGAAATTTGAGTCTATGGTAG-AGTGTACCATGATAGAT--GGTGGTTGAGT--AAAT-----CTCGAGACCA-ATCGTGCGT-------------------GTCT-CTC-TCCCG-GGTAACAGACT-CTGTGACCCGTTT--GCGTCCT-TTGAA-C-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAAGCATATCAA??????????????????
		Goodia_lotifolia                 0000000000001000000000100000000????????????????????????????????????????????AAG--GATCATTG-TCGATGCCTCACAAGC-AGA--GTGACCTGTG-AATTTGTT-ATT------TTAC-TGGGTGTCGGTTTGGGTGTT---CAACAC--ACAAGCCTCACTTAC-GTTGGGAGGAGGTTCCACGTG-TA---TTCGCGGACGCCTCCCAGCTCTAACACAAA-CCCC--GGCGCTGAATGCGTCAAGGAACTCAAATT-TGTTTAGTGC-GTTCCCGTATGCCC-GGAGACGGTGCC-TATGCGGAAGCG--T-TGCGA-CACATGAAA-ATCTAAA-CAACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGAAGCCATT-AGGCCGAGGGCACGCCTGCCTGGGTGTCACACATCGTTACCCTCTCCC--CAA-CGCCTTTACTT-GGGCGTTGAG--TCGGG-TGAATGTT-GGCTTCCCATGAGCCGTTTGTCTCGTGGTTAGTTAAAATCCGAGTCCATGGTGG-AGGGCGCCATGATAACT--GGTGGTTGAGT--AAAC-----CTCGAGACTA-CTCGTGCGT-------------------GTCC-CTC-TATCA-ATT-TG-GATTTCCTTG-CCCATGC--GTGTCTT-ACGGA-C-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGATTACCC???????????????????????????????????????
		Austrosteenisia_blackii          0000000000001010000000000000000????????????????????TTTCCGTAGGT---GAACCTGCGGAAG--GATCATTG-TCGATGCCTCACAAGC-AGT--TTGACCTGTG-AATATGTT--TT--ACCATCTA--GGGTTG-GCTGGCGACGTT--CAACGTCT-CAACCTCCCTTTC---GTCGGGAGGGAGTCACACCC-------TGTGTGGCTTCCTCTCGGCGG-AACACAAA-CCCC--GGCGCTTCGAGCGCCAAGGAATTCAAAAT-CGTTCGGTGTACTCTC-ATGGACCC-GGAAACGGTGCT--CCAGGGGGTGT--C-ACGTA-CACATGA---TACAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGCCGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCCCCAACGC--CA--TGCCACCTGT--TGGTAC-TGA-GCGGGG-CGAATGTT-GGCTTCCCGCAAGCC-T-GGTCTTGTGGTTGGTTGAAAATTGAGTCCGTGGTGG-AGTGCACCATGATATAT--GGTGGTTGAGT--AATG-----CTCGAGACCG-ATCATGCGT-------------------GACT-CTC-TGTCG-CTTTCG-GACT-CCGTGACCCTCGT--GCGTCT--TCAGAAC-GCTC--TTAACGAGACCTC-AGGTCAG-GC-GGGGCTACCCGCTGA-GTTTAA???????????????????????????
		Indigofera_thibaudiana           1000000000010111020000000010001???????????????????????????????????????????????????TCATTG-TCGATGCCTC--AAGA-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTC-GGGGTTG-GCTTGGCGCGTG--AAAACGCG-ACGGCCT-C-CCCT----GGCACGGGAGACGGCCAC-GC----TCCGTGGTTGTCTCTTAGCCCCT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCTAATT-TGTTGAACGAGCTCCT-GCCGGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-TGTGA-TCTGTTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-CGTCTCATTTT-GGGGTC-GTT-GGGGAG-CGTATGTT-GGCTTCCCACGAGCT-T-CGTCTCGTGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGTAAAAAG-----CTCGAAGCCA-ATCGTGCGT-------------------GGCT-CTT-GCAAG-GTTTCG-GACT-TCGTGACCCATAT--GCATC---CTCGA-T-GCTC--ATGACGAGACCTC-AGGTCAG-GC-GGGGCTAC?????????????????????????????????????????
		Indigofera_conzattii             1000000000010111020000000010001???????????????????????????????????????????????????TCATTG-TCGATGCCTC--AAGA-AAT--CCGACTCGTG-AACATGTT--T---GCTTACTT-GGGGTTG-GTTCGACGCGCG--AAAGCGCG-ACGGCCT-C-CCCT----GGCACGGGAGACGGCCAC-GC----TCTGTGGTTGTCTCTCGGCCTTT-AACAAA-CCCAC-GGCGCTGCATGCGCCAAGGAAATCCAATC-TGTTCAACGAGCTCCT-GCCGGCCC-GGAAACGGTGCT-GCGCGGGTGGCT--T-CGTGA-TCTGTTA---TTCAAAA-TGACTCTCGGCAACGGATATCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATT-AGGTTGAGGGCACGCCTGCCTGGGTGTCACACATCGTTGCTCCAATGC--CAA-CGTCTCATTTT-GGGGTC-GTT-GGGGAG-TGTAAGTT-GGCTTCCCATGAGCT-T-CGTCTCGTGGTTGGTTGAAAATCAAGTCTGTGGTGGGAGTGCACCGCGATTATTT-GGTGGTTGAGTACAAAG-----CTCGAAGCCA-ATCGCGCGT-------------------GGCT-CTT-GCACG-GTTTCG-GACT-TTGTGACCCATAT--GCATC---CTTGA-T-GCTC--ATAACGAGACCTC-AGGTCAG-GC-GGGGCTAC?????????????????????????????????????????
	;
END;

BEGIN ASSUMPTIONS;
taxset PANT = Indigofera_longimucronata Indigofera_sanguinea Indigofera_stenophylla Indigofera_astragalina Indigofera_varia Indigofera_frondosa Indigofera_tristis Indigofera_gleichenoides Indigofera_zeyheri Indigofera_arrecta Indigofera_tinctoria Indigofera_longiracemosa Indigofera_suffruticosa Indigofera_truxillensis Indigofera_conzattii Indigofera_thibaudiana Indigofera_articulata Indigofera_coerulea Indigofera_rhynchocarpa Indigofera_swaziensis Indigofera_caloneura Indigofera_zollingeriana Indigofera_australis Indigofera_pratensis Indigofera_rugosa Indigofera_jucunda Indigofera_natalensis Indigofera_braamtonyi Indigofera_kirilowii Indigofera_decora Indigofera_venulosa Indigofera_grandiflora Indigofera_koreana Indigofera_hebepetala Indigofera_himalayensis Indigofera_pendula Indigofera_amblyantha Indigofera_dosua Indigofera_kirkii Indigofera_strobilifera Indigofera_vohemarensis Indigofera_nebrowniana Indigofera_paniculata Indigofera_tetrasperma Indigofera_argentea Indigofera_rubroglandulosa Indigofera_hilaris Indigofera_mildbraediana Indigofera_colutea Indigofera_poliotes Indigofera_grata ; 
 taxset ELSE = Austrosteenisia_blackii Dalbergiella_nyassae Goodia_lotifolia Hypocalyptus_coluteoides Hypocalyptus_sophoroides Phylloxylon_spinosa Phylloxylon_xylophylloides Phylloxylon_perrieri Cyamopsis_tetragonoloba Cyamopsis_senegalensis Cyamopsis_dentata Indigastrum_costatum Indigastrum_argyraeum Rhynchotropis_poggei Rhynchotropis_poggei2 Microcharis_latifolia Microcharis_galpinii Indigofera_cuneifolia Indigofera_dimidiata Indigofera_amoena Indigofera_porrecta Indigofera_heterophylla Indigofera_ionii Indigofera_filifolia Indigofera_cytisoides Indigofera_hispida Indigofera_angustata Indigofera_alopecuroides Indigofera_sarmentosa Indigofera_filicaulis Indigofera_capillaris Indigofera_candolleana Indigofera_mauritanica Indigofera_angustifolia Indigofera_denudata Vaughania_pseudocompressa Vaughania_depauperata Vaughania_mahafalensis Vaughania_humbertiana Vaughania_cerighellii Indigofera_ammoxylum Indigofera_microcarpa Indigofera_trifoliata Indigofera_leucoclada Indigofera_bemarahaensis Indigofera_leptocarpa Indigofera_disticha Indigofera_torulosa Indigofera_trita Indigofera_marmorata Indigofera_spinosa Indigofera_lupatana Indigofera_cordifolia Indigofera_dalzellii Indigofera_schimperi Indigofera_oblongifolia Indigofera_lespedezioides Indigofera_tephrosioides ; 
 taxset CAPE = Indigofera_kirkii Indigofera_strobilifera Indigofera_vohemarensis Indigofera_nebrowniana Indigofera_paniculata Indigofera_tetrasperma Indigofera_argentea Indigofera_rubroglandulosa Indigofera_hilaris Indigofera_mildbraediana Indigofera_colutea Indigofera_poliotes Indigofera_grata ; 
 taxset MISS = Indigofera_tetrasperma Indigofera_stenophylla Indigofera_microcarpa Indigofera_poliotes Indigofera_lupatana Indigofera_astragalina ; 
 END;