NEXUS
[File created by TreeBASE:  7/26/07  21:01:33]
[Matrix accession#: M722]

BEGIN TAXA;
	TITLE M722;
	DIMENSIONS  NTAX=30;
	TAXLABELS
		Claviceps_purpurea_clp1	Claviceps_purpurea_clp2	Claviceps_purpurea_GAM12885	Claviceps_fusiformis_clf1	Claviceps_paspali_cpas1	Claviceps_sorghicola_cjap2	Claviceps_sorghicola_cjap7	Claviceps_africana_cla1	Claviceps_africana_cla2	Claviceps_africana_cla3	Claviceps_africana_cla4	Claviceps_africana_cla5	Claviceps_africana_cla7	Claviceps_africana_cla8	Claviceps_africana_cla9	Claviceps_africana_cla10	Claviceps_africana_cla12	Claviceps_africana_cla14	Claviceps_africana_cla17	Claviceps_africana_cla25	Claviceps_africana_cla26	Claviceps_africana_cla33	Claviceps_africana_cla34	Claviceps_africana_cla35	Claviceps_africana_cla56	Claviceps_africana_cla58	Claviceps_africana_cls1	Claviceps_africana_cls2	Claviceps_africana_cls3	Claviceps_africana_cls4
	;
END;

BEGIN CHARACTERS;
	TITLE M722;
	DIMENSIONS NCHAR=633;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Claviceps_purpurea_clp1           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAGTTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_purpurea_clp2           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCCATGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGCCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_purpurea_GAM12885       TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCATTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGACACAGCGGTACC---CGAG-CCCCCGCAAGGGA-GCAAAGGCGCCCCGTCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGACTTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGCCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_fusiformis_clf1         TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_paspali_cpas1           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_sorghicola_cjap2        TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAGAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCAGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGAGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_sorghicola_cjap7        TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-GCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTAAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla1           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla2           TTTCCGTAGGTGAACCTGCGGAAGGATCATTACCTAGAGTTTG---------TGGA--CT-TCGG---------TCTGCT-ACCTCTT-ACCCA---TGT--CTTTTGAG----------TACCT-TCGTTTCCTCGGC--GGG------------TCCGCCCGCCGGTTGGAC-AACATTCAAACCCTT-TGCAGTTGCAATCAGCG---------TCTGA--------AAAAACTTAATAGTTACAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCTTCAAGCTC----TGCTTGGTGTTGGGTGTTTTGTCTC-GC---------CTCC--GCGCG----CAGACTCGCCTTAAAACAATTGGCAG--CCGGCGTACTGATTTCGGAGCGCAGTA------CATCTCGCGCTTTGCACTCA--TAACGACGA-CGTCCA-AAA--GTACATCTTTACACTCTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA
		Claviceps_africana_cla3           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla4           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla5           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla7           TCTCCGTAGGTGAACCTGCGGAGGGATCATTACACA-AATATGAAGGCGGGCTGGAACCTCTCGGGGTTACAGCCTTGCTGAATTATTCACCCT---TGT--CTTTTGCG----------TACTTCTTGTTTCCTTGGT--GGG------------TTCGCCCACCACTAGGACAAACAT--AAACCTTT-TGTAATTGCAATCAGCG---------TCAGT--------AACAAATTAATAATTACAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTT----TGCTTGGTGTTGGGCGTCTTGTCTCTAG---------CTTT--GC-TG----GAGACTCGCCTTAAAGTAATTGGCAG--CCGGCCTACTGGTTTCGGAGCGCAGCA------CAAGTCGCACTCT-CTATCAGCAAAGGTCTAGCATCCATTAA--GCCTTTTTTTCAACTTTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA
		Claviceps_africana_cla8           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTCGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla9           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla10          TTTCCGTAGGTGAACCTGCGGAAGGATCATTACCTAGAGTTTG---------TGGA--CT-TCGG---------TCTGCT-ACCTCTT-ACCCA---TGT--CTTTTGAG----------TACCT-TCGTTTCCTCGGC--GGG------------TCCGCCCGCCGGTTGGAC-AACATTCAAACCCTT-TGCAGTTGCAATCAGCG---------TCTGA--------AAAAACTTAATAGTTACAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCTTCAAGCTC----TGCTTGGTGTTGGGTGTTTTGTCTC-GC---------CTCC--GCGCG----CAGACTCGCCTTAAAACAATTGGCAG--CCGGCGTACTGATTTCGGAGCGCAGTA------CATCTCGCGCTTTGCACTCA--TAACGACGA-CGTCCA-AAA--GTACATCTTTACACTCTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA
		Claviceps_africana_cla12          TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla14          TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla17          TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla25          TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla26          TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCAACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla33          TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla34          TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla35          TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCAACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla56          TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGGCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAA-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATTTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGCA-AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cla58          TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGGCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAA-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGCA-AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cls1           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TACAAACTCCC-----AAACCCTTTGTGAACCT-T--A-CCATATTGTTGCTTCGGCGGG-ACCGC---CCC---GGCGCCTTCGGGCCCGGAACC--AGG-----CGCCCGCCGG-AGGCC---CC---AAACTCTTATGT-----CTTT-AGTGGTTTTCTCCTCTGAGT-GACACATAAACAAATAAATAAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAGGCCCCCAGTGCCTGGTGTTGGGGATC--GGCCCAGC---------CTTCTCGCAAGGCC---GCCGGCCCCGAAATCTAGTGGCGGTCTCGCTGTA-GTCCTCCTCTGCGTAGTAGC--ACAACCTCGCAGTTGGAACGCGGC-GGTGGCCA--TGCCGTTAAACACCCCACTTCTGAAAGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cls2           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cls3           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
		Claviceps_africana_cls4           TCTCCGTTGGTGAACCAGCGGAGGGATCATTACC--GAGTT-----------TAC-AACTCCC-----AAACCCACTGTGAACTTAT--ACCCAAAACGTTGCCTCGGCGGGCACAGCGGTACC---CGAGCCCCCCGCAAGGGAGGCAGAGGCG-CCCGCCCGCCAG-GGGAC---CA---AAACTCTTCTGTA-TACCCAT-AGCGG----CATGTCTGAGTGGATTTAAAAACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTC----TGCTTGGTGTTGGGGACC--GGCTCAGCGGGTGCGGGCTTC-GGCCCGTCCCGTGCCGCCCCCGAAATGGATCGGCGGTCTCGTCGC--AGCCTTCTTTGCGTAGTAACATACCACCTCGCAACAGGAGCGCGGC--GCGGCCA-CTGCCGTAAAACGCCCAACTTTTTAGAGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAA
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 633 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;