#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on August 03, 2021; 4:45 GMT TreeBASE (cc) 1994-2008 Study reference: Seifert K., Hoekstra E., Frisvad J., & Louis-seize G. 2004. Penicillium cecidicola, a new species on cynipid insect galls on Quercus pacifica in the western United States. Studies in Mycology, 50. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1280] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=27; TAXLABELS Penicillium_aculeatum Penicillium_cecidicola Penicillium_dendriticum_DAOM226674 Penicillium_dendriticum_DAOM233861 Penicillium_dendriticum_gi403153 Penicillium_duclauxii Penicillium_funiculosum Penicillium_islandicum Penicillium_marneffei Penicillium_minioluteum Penicillium_piceum Penicillium_pinophilum Penicillium_purpurogenum Penicillium_resedanum Penicillium_rugulosum Penicillium_variabile Talaromyces_bacillisporus Talaromyces_flavus Talaromyces_gossypii Talaromyces_helicus Talaromyces_intermedius Talaromyces_purpureus Talaromyces_rotundus Talaromyces_stipitatus Talaromyces_thermophilus Talaromyces_trachyspermus Talaromyces_wortmannii ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2781] TITLE Penicillium_cecidicola_ITS; LINK TAXA = Taxa1; DIMENSIONS NCHAR=602; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Penicillium_aculeatum CATTACCGAGTGCGGGC-CC-TC-GCG-GCCCAACCTCCCACCCTTGTCTC-TATA-CACC-T--GTTGCTTTGGCGGGCCCACC--GGGG----CCACC---T-GGTCGCCGGGGGACGC------ACGT--CCCCGGG-CCC---GCGCCCGCCGAAGCGC-TC--TGTGAACCCTG--ATG--AA--GAT--GGGCTGTCTGAGT-AGTA--TG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGCGGTCCCCCC---------GGGG---ACCTGCCCGAAAGGCAGCGGCGACGTC-CGTC-T-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAA-GGACC----T--GCGGGGGTTGGTCAC------------CACC-A--------CATTTTACC-ACGGTTTGACC- Penicillium_cecidicola CATTACCGAGTGAGGGCTCCTTC-GTGAGCCCAACCTCCCACCCGTGTTTTAAACA-TACCCT--GTTGCTTCGGCGGGCCCACT--GGGC---TTCGGT---CCGGTCGCCGGGGGGCC-T---CTGTGC--CCTCGGG-TCC---GCGCCCGCCGATGCGCCT---CACGAACCCTG--ATG--AA--TA-T-GGGCTGTCTGAGT-TATAAATG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCTCCCT---GGCGGGGGG-ACCTGCCCGAAAGGCAGCGGCGACGTCGCGTC-C-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAA-GGACC----T--GCGCACGTCTGTCAC------------AACT-GTA-TT----TTTT-ACC-ACGGTT-GACCT Penicillium_dendriticum_DAOM226674 CATTACCGAGTGAGGGCTCC-TC-GTGAGCCCAACCTCCCACCCGTGTTTTTTACA-TACCCT--GTTGCTTTGGCGGGCCCACT--GGGC---TCTGTC---TCGGTCGCCGGGGGGCCCT---CTGGGT--CCTCGGG-TCC---GCGCCCGCCGAAGCGCCT---CATGAACCCTG--ATG--AA--GA-T-GGGCTGTCTGAGT-TTAATATG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCTCCCT---GGCGGGGGG-ACCTGCCCGAAAGGCAGCGGCGACGTCGCGTC-C-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAA-GGACC----T--GCGCGCGTCTGTCAC------------AACT-GTA-TT----TTTT-ACC-ACGGTT-GACCT Penicillium_dendriticum_DAOM233861 CATTACCGAGTGAGGGCTCC-TC-GTGAGCCCAACCTCCCACCCGTGTTTTTTACA-TACCCT--GTTGCTTTGGCGGGCCCACT--GGGC---TCTGTC---TCGGTCGCCGGGGGGCCTT---CTGGGT--CCTCGGG-TCC---GCGCCCGCCGAAGCGCCT---CATGAACCCTG--ATG--AA--GA-T-GGGCTGTCTGAGT-TTAATATG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCTCCCT---GGCGGGGGG-ACCTGCCCGAAAGGCAGCGGCGACGTCGCGTC-C-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAA-GGACC----T--GCGCGCGTCTGTCAC------------AACT-GTA-TT----TTTT-ACC-ACGGTT-GACCT Penicillium_dendriticum_gi403153 ----------TGCGGGCTCC-TC-GTGAGCCCAACCTCCCACCCGTGTTTTTTACA-TACCCT--GTTGCTTTGGCGGGCCCACT--GGGC---TCTGTC---TCGGTCGCCGGGGGACCTT---CTGGGT--CCTCGGG-TCC---GCGCCCGCCGAAGCGCCT---CATGAACCCTG--ATG--AA--GA-T-GGGCTGTCTGAGT-TTAATATG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCTCCCT---GGCGGGGG--ACCTGCCCGAAAGGCAGCGGCGACGTCGCGTC-C-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAA-GGA??-GG-T--GCGCGCGTCTGTCAC------------AACT-GTA-TT----TTTT-ACC-ACGGTT-GACCT Penicillium_duclauxii CATTACCGAGTGCGGGC-CC-TC-GCG-GCCCAACCTCCCACCCGTGTCTC-TCTA-CACC-T--GTTGCTTTGGCGGGCCCACC--GGGG----CCACC-----GGTCGCCGGGG?ACG-T----T-TGT--CCCCGG--CCC---GCGCCCGCCGAAGCGC-CC--TGTGAACCCTG--ATG--AA--GAT--GGGCTGTCTGAGT-ATGA--TG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCTG---------GGG----ACCTGCCCGAAAGGCAGCGGCGACGTC-CGTC-T-GGTCCTCGAGCGTATGGGGCTCTG-TCACTCGCTCGGGAA-GGACC----T--GCGGGGGTTGGTCAC------------CACC-AC-------ATTTTTACC-ACGGTT-GACCT Penicillium_funiculosum ------------------CC-TC-GTG-GCCCAACCTCCCACCCTTGTCTC-TATA-CACC-T--GTTGCTTTGGCGGGCCCACC--GGGG----CCACC---T-GGTCGCCGGGGGACG-T----T-CGTT-CCCCGGG-CCC---GCGCCCGCCGAAGCGC-TC--TGTGAACCCTG--ATG--AA--GA-T-GGGCTGTCTGAGT-ACTA--TG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCCC---------GGGG---ACCTGCCCGAAAGGCAGCGGCGACGTC-C-TC-T-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAA-GGACT------GGCGGGGGTTGGTCAC------------CACC-ACCAA----AATTTTACC-ACGGTT-GACCT Penicillium_islandicum CATTA??GAGTGCGGGTTCG-AC-ACGAGCCCAACCTCCCACCCGTGTCTACCGT--TACCGC--GTTGCCTCGGCGGGCCCACT--GGGG---CCTGGC--CCCGGTCGCCGGGGGCTG-----CT--GC--CC--GGG-CCC---GCGCCCGCCGAAGCG--CC--CTGGAACCCTGT-CTG--AA--TAGT--GA--GTCTGAGT-GCA---TGATTGAATC-ATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCCAGCGCGGCTGG-GTGTTGGG-CGCTGTCCCCCC---------GGG----ACACGCCCCAAAGGCAGTGGCGGCGCCGCGTC-G-GGTCCTCGAGCGTATGGGGCTCTG-TCACCCGCTCGGGAG-GGACTCGG-TCGGCGCTGGTCTTCCCCCC-CAG--GCGGCCCTTC-GGGGC-TCGTCT-CCT-CCGGTT-GACCT Penicillium_marneffei CATTACCGAGTGCGGGC-CC-TC-GCG-GCCCAACCTCCCACCCTTGTCTC-TATA-CACC-T--GTTGCTTTGGCGGGCCCACC--GGGG----CCACC---CCGGTCGCCGGGGGACG-T----T-TGT--CCCCGGG-CCC---GCGCCCGCCGAAGCGC-CC--TGTGAACCCTG--ATG--AA--GAT--GGACTGTCTGAGT-ACCA--TG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCTCC---------GGGG---ACCTGCCCGAAAGGCAGCGGCGACGTC-CGTC-T-GGTCCTCGAGCGTATGGGGCTCTG-TCACTCGCTCGGGAA-GGACC----T--GCGGGGGTTGGTCAC------------CACC-A---------TATTTACC-ACGGTT-GACCT Penicillium_minioluteum CATTACCGAGTGCGGGC-CC-TC-GTG-GCCCAACCTCCCACCCTTGTCTC-TATA-CACC-T--GTTGCTTTGGCGGGCCCACC--GGGG----TCACC---T-GGTCGCCGGGGGACAAT---CT--GT--CCCCGGG-CCC---GCGCCCGCCGAAGCGC-TC--TGTGAACCCTG--ATG--AA--GA-T-GGGCTGTCTGAGT-ACTA--TG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGCGGTCCCCCC---------GGGGG--ACCTGCCCGAAAGGCAGCGGCGACGTC-CGTC-T-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAA-GGGCT------GGCGGGGGTTGGTCAC------------CACC-A--AA-----ATTTTACC-ACGGTT-GACCT Penicillium_piceum CATTACCGAGTGCGGGTTCT-A--ACGAGCCCAACCTCCCACCCGTGTTTACCGTA--ACCGT--GTTGCCTCGGCGGGCCCACT--GGGG---CCCAGC--CCCGGTCGCCGGGGGGC-TT---C-GTGC--CCCCGGG-CCC---GCGCCCGCCGAAGCAC-C---CTGGAACCCTTT-ATG--AA--GAGT--GA--GTCTGAGC-ATGA---GATTGAATC-ATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCCAGCCCGGCTGG-GTGTTGGG-TGCTGTCCCCCC---------GGGG---ACACGCCCCAAAGGCAGTGGCGGCGCCGCGTC-G-GGTCCTCGAGCGTATGGGGCTCTG-TCACTCGCTCGGGAA-GGACTCG--CCGGCACTGGTCTCCTTC------------AA---A--AAAT----TTTT-CC---GGTT-GACCT Penicillium_pinophilum CATTACCGAGTGCGGGC-CC-TC-GCG-GCCCAACCTCCCACCCTTGTCTC-TATA-CACC-T--GTTGCTTTGGCGGGCCCACC--GGGG----CCACC---T-GGTCGCCGGGGGACGC------ACGT--CTCCGGG-CCC---GCGCCCGCCGAAGCGC-TC--TGTGAACCCTG--ATG--AA--GAT--GGGCTGTCTGAGT-ACTG--TG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCCC---------GGGG---ACCTGCCCGAAAGGCAGCGGCGACGTC-CGTC-T-GGTCCTCGAGCGTATGGGGCTCTG-TCACTCGCTCGGGAA-GGACC----T--GCGGGGGTTGGTCAC------------CACC-A--------TGTTTTACC-ACGGTT-GACC- Penicillium_purpurogenum ---------------------TC-GCGGGTCCAACCTCCCACCCGTGTCTCTTGAA-TACCCT--GTTGCTTTGGCGGGCCCACC--GGGT---CG-GCC----CGGTCGCCGGGG--CA-----CTGCGC--CCCCGG--CCT---GCGCCCGCCAGAGCGC-TC--TGTGAACCCTA--ATG--AA--GA-T-GGGCTGTCTGAGT--GTG-AT-TTTGAATT-ATCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCGCGGCTTGTGTGTTGGG-TGTGGTCCCCCCGGTGTT---GGGGG--ACTCGCCCGAAAGGCAGCGGCGACGTCCCGTC-TAGGTCCTCGAGCGTATGGGGCTTTG-TCACCCGCTCGGGAG-GGGCC----T--GCGGGCGTTGGCCACC-----------CACG-ATA-TT----TTTT----TACCGTT-GACCT Penicillium_resedanum CATTACCGAGTGCGGGCTC--TC-GC-AGCCCAACCTCCCACCCGTGTTTACCGTG--ACCCT--GTTGCTTCGGCGGGCCCACT--GGGC---CTATGC--CT-GGTCGCCGGGGGGCG-T---CT-CGT--CCCCGGG-TCC---GCGCCCGCCGGAGAA--TC--TCTGAACCCTGT-CTG--AA-GTA--A-G--TGTCTGAGT-GAAGA--TTTTAAATC-ATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATGAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTCACCCCCTCAAGCACGGCTTGTGTGTTGGG-CGTTGTCCCCTC---------GGGG---ACATGTCCGAAAGGCAGTGGCGGCGCCGCGTT-G-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAAAGGACCTG--CGGGCGTTGGTCTTCCTT--GTA----CAGCCCCTGTGGTT----GTCT-TTT-ATGGTT-GACCT Penicillium_rugulosum CATTACCGAGTGCGGGTTCC-A--ACGAGCCCAACCTCCCACCCGTGTTTACCATG--ACCGC--GTTGCCTCGGCGGGCCCACT--GGGG---CCTGGC--CCCGGTCGCCGGGGGGC-TT---CT--GC--CCCCGGG-TCC---GCGCCCGCCGAAGCG--CC--CTGGAACCCTGT-CTG--AA--TAGT--GA--GTCTGAGT-CTA---TGATTAAATC-ATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCCAGCCCGGCTGG-GTGTTGGG-TGCTGTCCCCCC---------GGGG---ACACGCCCCAAAGGCAGTGGCGGCGCCGCGTC-G-GGTCCTCGAGCGTATGGGGCTTTG-TCACCCGCTCGGGAC-GGACTCG--TCGGCGCTGGTCTTCCTC---CAG--GCGACCCTTC-GGGGC-CCGTCT-ACCTTCGGTT-GACCT Penicillium_variabile CATTA??GAGTGCGGGTTCC-A--ACGAGCCCAACCTCCCACCCGTGTTTACTGT--TACCGC--GTTGCCTCGGCGGGCCCACT--GGGG---CCTGGC--CCCGGTCGCCGGGGG-C-TT---CT--GC--CC-CGG--CCC---GCGCCCGCCGAAGCA--CC--CTAGAACCCTGC-CTG--AA--CAGT--GA--GTCTGAGT-GAGA---GATTGAATC-ATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCCAGCACGGCTGG-GTGTTGGG-CGCTGTCCCCCC---------GGG----ACACGCCCCAAAAGCAGTGGCGGCGCCGCGTC-G-GGTCCTCGAGCGTATGGGGCTTTG-TCACCCGCTCGGGAG-GGACTCGG-TCGGCGCTGGTCTTCCTTT--TAG--GCAGCCCTTC-GGGGTCGCGCCT-CTT-CCGGTT-GACCT Talaromyces_bacillisporus CATTACTGAGTGCGGGTTCTGA--TCGAGCCCAACCTCCCACCCGTGTTTACCGTG--ACCGT--GTTGCTTTGGCGGGCCCACT--AGGG---CTCCCC--TCTGGTCGCCGGGGGGCTG----CT--GC--CCCCGGG-CCC---GTGCCCGCCGAAGCGC-C---TGTGAACCCTGT-CTG--AA--TAGT--GA--GTCTGAGT-GTGG---GATGAAATC-ATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAATTGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGAATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCCAGCGCGGCTGG-GTGTTGGG-TGTTGTCCCCCC---------GGGG---ACATGCCCCAAAGGCAGTGGCGGCGCCGCGTC-G-GGTCCTCGAGCGTATGGGGCTCTG-TCACTTGCTCGGGAC-GGACCTG--CGGGCGTCGGTCTTCCCCATGCAGTCT---CCCGGAAGGGAGGGTGTCT-TCT-ACGGTT-GACCT Talaromyces_flavus CATTACCGAGTGCGGGC-CC-TC-GCG-GCCCAACCTCCCACCCTTGTCTC-TATA-CACC-T--GTTGCTTTGGCGGGCCCACT--GGGG---GCCCCC---T-GGTCGCCGGGGGACA-T---C--CGT--CCCCGGG-CCC---GCGCCCGCCGAAGCGC-TC--TGTGAACCCTG--ATG--AA--GAT--GGGCTGTCTGAGT-ATTA--TG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCCC---------GGGG---ACCTGCCCGAAAGGCAGCGGCGACGTC-CGTC-T-GGTCCTCGAGCGTATGGGGCTCTG-TCACTCGCTCGGGAA-GGACC----T--GCGGGGGTTGGTCAC------------CACC-A--------CATTTTACC-ACGGTT-GACC- Talaromyces_gossypii CATTACTGAGTGCGGGCTCC------GGGCCCAACCTCCCACCCGTGTCTCTTAGG-TACTTT--GTTGCTTTGGCGGGCCCATC--GGG-----TCACT---CCGGTCGCCGGGGGGCGC-----TATGC--TCCCGGG-CCC---GTGCCCGCCAGAGCACCCC--TGTGAACCCTG--ATG--AA--GAGA--GGCTGTCTGAGT-CCCACG-AT---AATCG-TTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCGCGGCTTGTGTGTTGGG-CGTGGTCCCCCTGGCTTTGGCGGGG---ACCTGCCTGAAAGGCAGCGGCGACGTCCCGCC-TA-GTCCTCGAGCGTATGGGGCTCTG-TCACGCGCTCGGGAG-GGAC-----T-GGTGGGCGTTGGCGTTGG-T-----C-ACCCC-----TT----ATTCTTTCTATGGTT-GACCT Talaromyces_helicus CATTACCGAGTGCGAGC-CC-TC--TGGGCTCAACCTCCCACCCGTGCCGT-TATAATACC-T--GTTGCTTTGGCGGGCCCACT--GGGG----TCACC---T-GGTCGCTGGGGGACGC----CT--GT--CCCCGGG-CCC---GCGCCCGCCGAAGCAC-CC--CCTGAACTCTG--AAG--AA--GAT-AGGGCTGTCTGAGT-ACC-TA-G--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCCAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCCC---------GGGGG--ACCTGCCCCAAAGGCAGCGGCGACGCC-CGTC-G-GGTCCTCGAGCGCATGGGGCTTTG-TCACTTGCTCGGGAG-GGACC----T--GCGGGGGTTGGTCAC------------CACC-AAATC----TTTT------ACGGTT-GACCT Talaromyces_intermedius CATTACCGAGTGCGGGC-CC-TC-GCG-GCCCAACCTCCCACCCTTGTCTC-TATA-CACC-T--GTTGCTTTGGCGGGCCCACC--GGGG----CCACC---T-GGTCGCCGGGGGACG------T-CGT--CCCCGGG-CCC---GCGCCCGCCGAAGCGC-CC--TGTGAACCCTG--ATG--AA--TAT--GGGCTGTCTGAGT-ACTA--TG--AAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCCC---------GGGG---ACCTGCCCGAAAGGCAGCGGCGACGTC-CGTC-T-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAA-GGACC----T--GCGGGGGTTGGTCAC------------CACC-A--------TATTTTACC-ACGGTT-GACC- Talaromyces_purpureus CATTACCGAGTGAGGGCTCCCTC-GCGAGCCCAACCTCCCACCCGTGTTTT-TACA-TACCCT--GTTGCTTCGGCGGGCCCACC--GGGT---TC--GC---CCGGTCGCCGGGGGGCA-----CTTCGC--CCCCGGG-CCC---GCGCCCGCCGAAGCGCCT---ATTGAACCCTG--ATG--AA--GA-T-GTACTGTCTGAGT--CTA-A-ATGAAAATTG-TCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCCCCGTTTTA---GGGGGG-ACCTGCCCGAAAGGCAGCGGCGACGTCGCGTC-G-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAG-GGACC----T--GCGGGCGTTGGTCACCC----------AACT-GTA-TT----TTTC----CACGGTT-GACCT Talaromyces_rotundus CATTACCGAGTGCGGGTTCT-A--ACGAGCCCAACCTCCCACCCGTGTTTACCGTA--ACCGC--GTTGCCTCGGCGGGCCCACT--GGGG---CCTGGC--CCCGGTCGCCGGGGGGCA-T---CT--GC--CCCCGGG-CCC---GCGCCCGCCGAAGCG--CC--CTGGAACCCTGT-CTG--AA--TAGT--GA--GTCTGAGT-GAGA---TTTTAAATC-ATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAATTAATGTGAATTGCAG-AATTCCGTGAATCATCGAGTTTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCCAGCACGGCTGG-GTGTTGGG-CGCTGTCCCCCC---------GGGG---ACACGCCCCAAAGGCAGTGGCGGCGCCGCATC-G-GGTCCTCGAGCGTATGGGGCTTTG-TCACCCGCTCGGGAG-GGACTCG--TCGGCGCTGGTCTTCCCC---CAG--GCGACCCTTC-GGGGC-TCGTCT-TCTTCCGGTT-GACCT Talaromyces_stipitatus CATTACCGAGTGAGGGC-CC-TC-GCG-GCCCAACCTCCCACCCTTGTCTC--ATA-TACC-T--GTTGCTTCGGCGGGCCCACC--GGGG----CCACC---T-GGTCGCCGGGGGACG-T---CT--GT--CCCCGG--CCC---GCGCCCGCCGGAGCGC-CC--TTTGAACCCTG--ATG--AA--GAT--GGGCTGTCTGAGT-GATA--TG--AAAATTG-TCAAAACTTTCAACAACGAATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCACGGCTTGTGTGTTGGG-TGTGGTCCCTCC---------GGGG---ACCTGCCCGAAAGGCAGCGGCGACGTC-CGTC-T-GGTCCTCGAGCGTATGGGGCTCTG-TCACTCGCTCGGGAA-GGACC----T--GCGGAGGTTGGTCAC------------CACC-AC-AT----CTTTTTTAC-AAGGTT-GACCT Talaromyces_thermophilus ---------GTGCGGGAACC-A??--???TCCAATCTCCCACCCGTGTCTACC--A-CACCTGGTGTTGCTTTGGCGGGCCCACTCCTCCGGTCTCCGCCGGGGGGGTCGTCCCGGGGCG-----C-G-GTTTTGCCGGGGCGC---GTGCCCGCCAGAGCGCATCACTGTGAATGCTTG-TTGTGAA--TGCGAGGATTGTCTGAGTGATGAAATG---CAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCCTCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCCCGTTGCAGGGGGGGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGTC-C-GGTCCTCGAGCGTATGGGGCTCTG-TCACGCGCTC---AA-GGAGG-GGTCCGGCCGGGGCCATAGCC------------TCAA-AGGTCAGAC-TTTTTTCC-AAGGTT-GACCT Talaromyces_trachyspermus CATTACCGAGTGGCCGCTC--T----GGGCCCAACCTCCCACCCGTGTCTCTTGCG-TACTTT--GTTGCTTTGGCGGGCCCACT--GGG-----TCACT---CCGGTCGCCGGGGAGCGC-----TATGC--T?????--CCC---GTGCCCGCCAGAGCACCCC--TGTGAACCCTG--ATG--AA--GAGA--GGCTGTCTGAGT-CCCACG-AT---AATCG-TTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCAAGCGCGGCTTGTGTGTTGGG-CGTG-TCCCCCTGGCTTTGGCGGGG---ACCTGCCCGAAAGGCAGCGGCGACGTCCCGCC-TA-GTCCTCGAGCGTATGGGGCTCTG-TCACGCGCTCGGGAG-GGAC-----T-GGTGGGCGTTG--------T-----C-ACCCC-----TT----ATTCTTTCCACGGTT-GACCT Talaromyces_wortmannii CATTACCGAGTGCGGGTTCT-A--ACGAGCCCAACCTCCCACCCGTGTTTACTGT--TACCGC--GTTGCCTCGGCGGGCCCACT--GGGG---CCTGGC--CCCGGTCGCCGGGGG-C-TT---CT--GC--CC??GG--CCC---GCGCCCGCCGAAGCA--CC--CTAGAACCCTGC-CTG--AA--TAGT--GA--GTCTGAGT-GAGA---GATTAAATC-ATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAA--CGCAGCGAAATGCGATAAGTAATGTGAATTGCAG-AATTCCGTGAATCATCGAATCTTTGAACGC-ACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTTC-TGCCCTCCAGCACGGCTGG-GTGTTGGG-CGCTGTCCCCCC---------GGG----ACACGCCCCAAAAGCAGTGGCGGCGCCGCGTC-G-GGTCCTCGAGCGTATGGGGCTTTG-TCACTCGCTCGGGAG-GGACTCGG-TCGGCGCTGGTCTTCCTTT--TAG--GCAG???TTC-GGGGT-GCGCCT-CTT-CCGGTT-GACCT ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = Penicillium_cecidicola_ITS) = N: 1-602; CODONPOSSET CodonPositions (CHARACTERS = Penicillium_cecidicola_ITS) = N: 1-602; END; BEGIN TREES; TITLE Tb7147; LINK TAXA = Taxa1; TRANSLATE 1 Penicillium_purpurogenum, 2 Penicillium_pinophilum, 3 Penicillium_piceum, 4 Penicillium_minioluteum, 5 Penicillium_marneffei, 6 Penicillium_islandicum, 7 Penicillium_funiculosum, 8 Penicillium_duclauxii, 9 Penicillium_dendriticum_gi403153, 10 Penicillium_dendriticum_DAOM233861, 11 Penicillium_dendriticum_DAOM226674, 12 Penicillium_cecidicola, 13 Penicillium_aculeatum, 14 Talaromyces_wortmannii, 15 Talaromyces_trachyspermus, 16 Talaromyces_thermophilus, 17 Talaromyces_stipitatus, 18 Talaromyces_rotundus, 19 Talaromyces_purpureus, 20 Talaromyces_intermedius, 21 Talaromyces_helicus, 22 Talaromyces_gossypii, 23 Talaromyces_flavus, 24 Talaromyces_bacillisporus, 25 Penicillium_variabile, 26 Penicillium_rugulosum, 27 Penicillium_resedanum; TREE Fig._1 = [&R] (15,(22,((((19,(((9,10),11),12)),((((((((7,4),13),23),2),20),(17,5)),8),21)),((((((((14,25),6),18),26),3),24),27),16)),1))); END;