#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 24, 2021; 10:35 GMT TreeBASE (cc) 1994-2008 Study reference: Okane I., & Nakagiri A. 2007. Taxonomy of an anamorphic xylariaceous fungus from a cultured-termite nest found together with Xylaria angulosa. Mycoscience, 48: 240-249. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1735] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=45; TAXLABELS Biscogniauxia_atropunctata Biscogniauxia_marginata Biscogniauxia_mediterranea_AF280624 Biscogniauxia_mediterranea_AJ390413 Biscogniauxia_nummularia Biscogniauxia_repanda Camillea_obularia Camillea_tinctor Creosphaeria_sassafra Diatrype_disciformis Fungus_NBRC_102095_AB27813 Hypoxylon_annulatum Hypoxylon_cinnabarinum Hypoxylon_cohaerens_var._microsporum Hypoxylon_fendleri Hypoxylon_fragiforme_AF201709 Hypoxylon_fragiforme_AJ390401 Hypoxylon_fuscum_AF201715 Hypoxylon_fuscum_AJ390404 Hypoxylon_intermedium Hypoxylon_ochraceum Hypoxylon_papillatum Hypoxylon_perforatum Hypoxylon_rickii Kretzschmaria_clavus Kretzschmaria_deusta Nemania_aenea Nemania_aenea_var._aureolutea Nemania_bipapillata Nemania_chestersii Nemania_serpens_AJ390431 Nemania_serpens_AJ390432 Nemania_serpens_var._macrospora Whalleya_microplaca Xylaria_acuta Xylaria_angulosa Xylaria_apiculata Xylaria_arbuscula 'Xylaria cornu-damae' Xylaria_enteroleuca Xylaria_fioriana Xylaria_hypoxylon Xylaria_longipes Xylaria_mali Xylaria_polymorpha ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1729] TITLE Termite_Fungus_ITS_rDNA; LINK TAXA = Taxa1; DIMENSIONS NCHAR=771; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Biscogniauxia_atropunctata GGGATCATTA--GCGAGT--TAATTACAAA----CTCC----------------AAA-CCCA--TGT-GAAC-ATACCTACT-GTTGCC-TCGGCAGGCCGTGCTGCGCGGCTGGATCGCCTCCCCCGCGTGGGCAGCT-ACCC---TGGAGTAGC------------------------------------------TACCCTGTAGCGGGAGCGGCCCGCCCCGCGGCGCGCCAA-----------------------------------------------CAGGCCTGCCG-AAGG--ACCCCT---AAACTCT------------------GTTTCGCACCTGT----ATCTCTG----AGTTTATTATAC---AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCTAATAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-CCAAGCCCTATT-TGCTTGACGTTGGGAGT-TTACGGAGA--------CGTAATTCCTCAAATATAGT-GGCGGAGCTGGGT-CGT--GCTCTAAGCGTA--GTA-----ACCAA-------ATTCTCGCTTCTG--AGGCC-----GGCCCGGGTCCT-GCCGTAAAACCCCCTATATTTTTTTT-----------CTG-GTT-GACCTC Biscogniauxia_marginata GGGATCATTA--GCGAGT--TACTG-GAAAA---CTCC----------------AAA-CCCC--TGT-GAAT-ATACCTATT-GTTGCC-TCGGCAGGCTGTGCTGTCTGGT-AGCTCCT--------------------ACCC---TG-TAGT--------------------------------------------TACCCTGTAGCTGGTGGCTGCTACCCCGCAGCACGTTGT-----------------------------------------------AAGGCCTGCCG-GAGG--ACCTCT---AAACTCT------------------GAATATTACTGT-----ATGTCTG----AGTCTATTTGAG---AAATTGAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCTGCAGTACTCTGCTGGGCATGCCTGTTCGAGCGTCATTTC-GA-CCA-TCAAGCCCTGTA-TGCTTGACGTTGGGAAT-TTACAGTGC--------TGTAATTCCTTAAATCCAGT-GGCGGAGCCGGGT-CAT--GCTCTAGGCGTA--GTA-----ATTAT-------ATCCTCGCCTCTGT-AGCTG------TCCCTTATCCT-GCCGTAAAGCCCACTAAATTATAAC-------------TG-GTT-GACCTC Biscogniauxia_mediterranea_AF280624 ---ATCATTA--GCGAGT--TAATTACAAA----CTCC---------------AAAA-CCCC--TGT-GAAC-TTACCTAT--GTTGCC-TTGGCAGGTCGTGGTGTGTAGCGTGATCGCTATAAGGGATC---------ACC----GCCTCGC------------------------------------------ACCACGCTGAAA-------------------------------------------GACCT-----------------------------------GTCA-AAGG--ACCCCT---AAACTCT------------------GTCTTACAACTGT----ATCTCTG----AGTCTATTATATA---AAC-AAGTTA-AAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCTGATAGTATTCTGTCAGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-CCAAGCCCTAATCTGCTTGACGTTGGGAGT-TTACGGAGA--------CGTAATTCCTCAAATATAGT-GGCGGAGCTAGGT-CGT--GCTCTAAGCGTA--GTA-----ACCAC-------ACTCTCGCTTCTGC-AGCCGG------CCTAGGTCTT-GCCGTAAAACCCCTATATTTATTTTTTAC---------TG-GTT-GACCTC Biscogniauxia_mediterranea_AJ390413 GGGATCATTA--GCGAGT--TAAT--CATAAA--CTCC------A---------AAA-CCCC--TGT-GAAC-TTACCTAT--GTTGCC-TCGGCAGGTCGTGGTGTGTAGCGGTGACCACTGGGTCGCTTGCCTCGC--ACCACGCTGAA-------------------------------------------------------------------------------------------------------------------------------------AAGACCTGTCA-AAGG--ACCCCT---AAACTCT------------------GTTTTTACAACTGT---ATCTCTG----AGTCTATTATAC---AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCTGATAGTATTCTGTCAGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-CCAAGCCCTATT-TGCTTGACGTTGGGAGT-TTACGGAGA--------CGTAATTCCTCAAATATAGT-GGCGGAGCTAGGT-CGT--GCTCTAAGCGTA--GTA-----ACC-ACA-----ATTCTCGCTTCTGC-AGCCG------GCTTAGGTCCT-GCCGTAAAACCCCTATATTTTTTTAT------------TG-GTT-GACCTC Biscogniauxia_nummularia GGGATCATTA--GCGAGT--TAAA--CAAA----CTCC----------------AAA-CCCA--TGT-GAAC-ATACCTACT-GTTGCC-TCGGCAGGTCGTGCTGTGCGGTGGTGATACCTACCCTGGAGTAGGAACCTACCC---TG-TAGTGACC----------------------------------------TACCCTGGAGTGGAGCTACCCTGCAGCACGCAAC----------------------------------------------------CAGGCCTGCCA-AAGG--ACCCCT---AAACTCT------------------GTTATAACGT-------ACCTCTG----AGTCAACTATAC---AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCTAATAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-CCAAGCGCTACT-TGCTTGACGTTGGGAAT-TTACAGCTGC-------TGTAA-TTCCTCAAATTTAGTGGCGGAGCTAGGT-CAT--GCTCTGAGCGTA--GTA-----ATTCT-------GTTCTCGCTCCTGA-AGCTG------CCCTATATCCT-GCCGTAAAACCCCTAAATTATAATC-------------TG-GTT-GACCTC Biscogniauxia_repanda GGGATCATTA--GCGAGT--TGTTA-AAA-----CTCC------A---------AAA-CCCA--TGT-GAAC-ATACCGTCT-GTTGCC-TCGGCAGGTCGTGCCGCCGGGTGGTCTGCCT-------------------ACCC---TG-TAACAGCT--ACCCGGTAGCTACCCTAGAGGAGC--------------TACCCTGTAGCAGTTACCCTGTAGGTGCTACCCTGCAGCACGCACC-----------------------------------------CGGCCTGTCG-AAGG--TCCCCT---TAACTCT------------------GTTTAATCTGT------ATCTCTG----AGTCCTATGTGG---AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCGACAGTATTCTGTCGGGCATGCCTGTTCGAGCGTCATTTC-GA-CCA-TTAAGCCCTATT-TGCTTAACGTTGGGAAT-TTACGCCC---------TGTAATTCCTCAAAACCAGT-GGCAGAGCTGGGT-TAT--GCTCTAAGCGTA--GTA-----TTTAT-------TTCCTCGCTTCTGT-AGCTA------GCTTAGGTCCT-GCCGTAAAAACAGTATATATCTAG--------------TG-GTT-GACCTC Camillea_obularia GGGATCATTA--GCGAGT--TAATTACAAA----CTCC----------------AAA-CCCC--TGT-GAAC-ATACCTATT-GTTGCC-TCGGCAGGTCGTGCTGCGCGGTGAAGTCTCTCTAATTCAGAGGTAGTT--ACCC---TGGAGTAGC------------------------------------------TACCCTGGAGAAGGGAGGTGCTTACCCCGCAGCACCCAACAA-----------GACCT-----------------------------------GTCA-GAGG--ACCTTT---AAACTCT------------------ATTTTATAAC-GT----ATCTCTG----AATCAACTATACA---AAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCTAATAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-CCAAGCCCTATT-TGCTTGACGTTGGGAGT-TTACGGAAA--------CGTAATTCCTCAAATATAGT-GGCGGAGCTAGGT-CGT--GCTCTAAGCGTA--GTA-----ACTTAATT----CTCGCTTCTGT----AGCCGG------CTAAGGTCCT-GCCGTAAAACCCCTATATTTTTCT-C------------TG-GTT-GACCTC Camillea_tinctor GGGATCATTA--GCGAGT--TAATTACAAA----CTCC----------------AAA-CCCA--TGT-GAAC-TTACCTGCT-GTTGCC-TCGGCAGGTTGCGCTGCGGAGTGCCT------------------------ACCC---TG-GAGTGGCCT-ACCCTGGAGTAGC-------------------------TACCCTGTAGTGCCTACCCTGGAGTAGGCACCCCGCAGCGCGCAAC----------------------------------------CAGACCTGCCA-GAGG--ACCTCT---GAACTCT------------------TTTTTACACTGG-----AACTCTG----AAACTATTATAC---AAAC-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCTAACAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-CCAAGCCCTATT-TGCTTGACGTTGGGAGT-TTACGGAAA--------CGTAATTCCTCAAATATAGT-GGCGGAGCTAGGT-CGT--GCTCTAAGCGTA--GTA-----ATTAT-------ATTCTCGCTTCTGC-AGCCG------GTCTAGGTCTT-GCCGTAAAGCCCTATATTTTTC----------------TG-GTT-GACCTC Creosphaeria_sassafra GGGATCATTA--CAGAGT--TAT---CTAA----CTCCC---------------AAA-CCCAA-TGT-GAAC-CTACCTAT--GTTGCC-TCGGCGGGAGAAGCCT--ACCCGGTACCT---------------------ACCC---TGTAGCT------ACCCGGGAAC----------------------------TACCCTGTAGTTG-----------------------------------------------ATGGCGGACCC----------------------GCCGGTGGAC-ATTTTAA--AAACTCTT-----------------GTTCTAC--TGT--GATA-CTCTG------AGTAATAAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CTC-TTAAGCCTTAGT-TGCTTAGCGTTGGGAGG-TTGCCTCT---------CGCAACTCCCTAAAATCAGT-GGCAAGGACCACGACACCTTGAAGTGTAGTA--GTT-----TAATTCTC----ACTTTGGAGGA----------------CCGTAGCCCA-GCCAT-AAACCAACTATTTTTAATT-----------ATTG-GTT-GACCTC Diatrype_disciformis GGGATCATTA--CAGAGT--TACCTAA-------CTCC----------------AAA-CCCA--TGT-GAAC-TTACCTAT--GTTGCC-TCGGCGGGGAAGCCT-----------------------------------ACCC---GGTACC---------------------------------------------TACCCTGTAGTTACCCGGGAGCGAGCTACCCTGTAGCCCGCTGCAGG---------------------------------------CCTACCCGCCG-GTGG--ACAGTT---AAACTCTT-----------------GTTTTTACAGTGAA---ACTTCTG-----ATATTTTATACT--TAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-GA-CCA-TCAAGCCCCGGT-TGCTTGGTTTTGGGAGC-CTATCTCTAGG------GATAGCTCCTTAAATAGAGT-GGCGGAGTCGTGC-CG---ACCCCAAGCGTA--GTA-----ATTT--------CTTCTCGCTTC----AGGTGCCGG-TGCTGACGTCCT-GCCGTTAAACCCCCTATTTTTAAA--------------AG-GTT-GACCTC Fungus_NBRC_102095_AB27813 GGGATCATTA--GAGAGT--GTAAA---------CTCCC---------------AAA-CCCA--TGT-GAAC-GTTACCGAC-GTTGCC-TCGGCAGGCCGCAA--TGGTCT-GCCGGAGGCCCCATGA-----------ACCC---TGTTTAATAA---GGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTG------AGTTAATACAG---AAT-ACGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCGCCAGCATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TCAGGCCTCTGT-TGCCTGGTGTTGGGGGA-CTACC-----------CTGTAGCCCCCGAAAGACAGT-GGCGGAGCCGGCC-TCG--GCCCCGGACGTA--GTA------CAC--------ATCCTCGTCCG----CGGCA-G---GGCCGGTGTCCC-GCCGTAAAACCCCCCATCTC-----------------AAG-GTT-GACCTC Hypoxylon_annulatum GGGATCATTA--CCGAGT--TATCA-CAA-----CTCC-----------------AA-CCCTT-TGT-GAACCTTACCGTC--GTTTCC-TCGGCGC-ACTGCTGTGGGAGGCT--------------------------ACCC---TG-TAGCGGTTGTT-------------------------------------TACCCTACAGGACGCACCCTGC----------------------------------------------------------------AGCGGCGCCGA-AAGG--ACTACCA--AAACTCT--------------------TTTATCCAAGTT---ACCTCGA------ACAATTTACTATACAAT-AGTTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTTAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTC-AA-CCC-TTAAGCCCT-GT-TGCTTAGCGTTGGGAAT-CTGCTAGCCTCGG----CGCAGTTCCTTAAATTCATT-GGCGGAGCTGTGG-CAC--ACTCTAGGCGTA--GTA-----GTTTAAC-----ACCTCGCCTCTAG--AGTGGCC-----GCGGTTACTG-GCCGTAAAACCCCTATATTTCTAG--------------TG-GTT-GACCTC Hypoxylon_cinnabarinum GGGATCATTA--AAGGGT--CGCGTGC-------CTCGCACGCGGCATCCTGCCCAA-CCCT-ATGT-GAAC-TTACCACT--GTTGCC-TCGGCGGC-GCCGCGGCT--------------------------------ACCC---GG-GAGC--------------------------------------------TACCCTGTAACCGCCTACCCTGTAGGCGGCTACCCTGTAGCCACCCTGTAGCTCGCACGC--------------------------AAGGCCCGCCA-GAGG--ACCCC----AAACTCT------------------GATTATACCCTA----CAACTCTG----AATTAGCCAACGT---AAT-ACGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCACTAGCATTCTGGTGGGCATGCCTATTCGAGCGTCATTGC-AA-CCCCTTAAGCCCT-GT-AGCTTAGCGTTGGGGGA-CCACGTCTCAGCGA---CGTGGCCCCTGAAATGTAGT-GGCGGAGTTGGTG-AGC--ACTCTCAGCGTA--GTA-----ATT---------CTTCTCGCTTCGG--GGGTCTGCCG--CTGGCTGCTG-GCCGTAAAAAAACCCTATACTCTTA------------GTG-GTT-GACCTC Hypoxylon_cohaerens_var._microsporum GGGATCATTA--CTGAGA--GTAAAACAAAA---CTCC---------------AAAA-CCCT-TTGT-GAACCTTACCTTA--GTTGCC-TCGGCGTGCGCCGCGGCT--------------------------------ACCC---GG-GAGG------ACCGCTGTAGGGCGGT----------------------TACCCTGTAGCCGGCCCACG---------------------------------------------------------------------GCCCGCCG-AAGG--ACCACT---GAACTCTT-----------------GTTTATCACATTG---CATCTCTG----ATTTAAACTATTA--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTC-GA-CCA-TTAAGCCCCTGT-AGCTTAGCGTTGGGAGC-CTACGTCCTCGCGG---CGCAGCTCCTCAAAGTCAGT-GGCGGAGTCGGGT-CGT--GCTCTGAGCGTA--GTA-----GTTAA-------TATCTCGCTTCTG--CGGTGCCC----CCGGCTGCCT-GCCGTAAAACCCCCCCCTATACTTTCGT--------ATTG-GTT-GACCTC Hypoxylon_fendleri GGGATCATTA--CAGAGT--TAATC-CAAAA---CTCC---------------AAAA-CCCTTATGT-GAAC-TTACCGCT--GTTGCC-TCGGCGTGTGCCGCGAGCT-------------------------------ACCC---TG-TAGCT-----ACCCAGTAGGTGAC------------------------TACCCTGTAGTCACCTACCCTGGAGCTACCCTGTAGTCCGCATTAAGGC------------------------------------------CCGTCG-AAGG--ACCACT---AAACTCTT-----------------GTTTTTATACTGTGGATATCTGAA------TGCTTCAACTA-TAAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-CGCTTAGCGTTGGGAAT-CTACGTTACGG------CGTAGTTCCTCAAATTTAGT-GGCGGAGTTGTAG-CAC--ACTCTAAGCGTA--GTA-----GAAT--------CTTCTCGCTTCTGT-AGTTACTGT-----GACTTTTT-GCCGTAAAACCCTCTATTTTCTA--------------GTG-GTT-GACCTC Hypoxylon_fragiforme_AF201709 GGGATCATTAGGAGGAAT--ACC---CAAAAC--CTCC----------------CAA-CCCC--TGT-GAAC-TTACCACT--GTTTCC-TCGGCGTGCGCACCTGGTTGCCCGCGGGGGATCCG-AGCCT---------ACCC---TG-TAGC-----TACCCTGTAGCTACCCTGTAGC-----------------TACCCTGTAGACCCGGGTCCTCAGC-------------------ACACGGCGCC-GCTCA---------------------AGGT-----CCCGCCG-AAGT--ACCCTG----AACTC-------------------GTTTAAC---G---TGGAATTCTG-----AATGCTTCAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTC-AA-CCC-TTAAGCCTCTGT-TGCTTAGCGTTGGGAGT-CTACGGGTTACC----CTGTAGTTCCTGAAAACCATT-GGCGGAGTCAGGG-AGC--ACTCTAAGCGTA--TTACACAATCTTTT-----TGTCTCGCTTTGGAT-A-TT--GCC---CCGCCTCCAC-GCCGTAAAACCCCCCATATCA----------------AAT-GTT-GACCTC Hypoxylon_fragiforme_AJ390401 GGGATCATTA--GAGGAA--TACC--CAAAA---CCTCCC---------------AA-CCCC--TGT-GAAC-TTACCACT--GTTTCC-TCGGCGTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCT----------ACCC---TG-TAGCT-----ACCCTGTAGC----------------------------TACCCTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAA----------------------------------------------GGTCCCGCCG-AAGT--ACCCT----GAACTCT------------------GTTTAACGTGG------AATTCTG-----AATGCTTCAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTC-AA-CCC-TTAAGCCTCTGT-TGCTTAGCGTTGGGAGT-CTACGGGTTACCC----TGTAGTTCCTGAAAACCATT-GGCGGAGTCAGGG-AGC--ACTCTAAGCGTA--TTA-----CACAATCTTTT-TGTCTCGCTTTGG--ATATTGC----CCCGCCTCCAC-GCCGTAAAACCCCCCATATCAA----------------AG-GTT-GACCTC Hypoxylon_fuscum_AF201715 GGGATCATTA--CTGAGT--TCTTA-CAAA----CTCC----------------AAC-CCTT--TGT-GAACCATACCAACT-GTTGCC-TCGGCGTGAGCTGCGGCTGCGTGGTAG-C---------T-----------ACCC---GGTAGTC------ACCTACCCGGTACC------------------------TACCCTGTAGCGTCT---------------------------------------GCGTAT--------------------------AA-GCCCGCCG-AAGG--ACCACT---AAACTCT------------------GTTTAAC---A---GTGTATTCTG-----AATGCTTCAACT--AAAT--AGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTC-GA-CCC-TGAAGCCCTGGT-TGCTTCGCGTTGGGACT-CTACTGGCTACC----CTGTAGTTCCCTAATGACAGT-GGCGGAGTTCACG-TGT--ACTCTCAGCGTA--GTA-----ATTTC-------TTCTCGCTTTTGC--A-GT--AGC---CTGGTCACCA-GCCGTAAAACCCCCTATTTTCT--------------AGTG-GTT-GACCTC Hypoxylon_fuscum_AJ390404 GGGATCATTA--CTGAGT--TCTTA-CAAA----CTCC-----------------AA-CCCT-CTGT-GAACCATACCATT--GTTGCC-TCGGCGAGAGCTGTGGCT-GCCTGGTAGTTGTCTTGTAGTTATCT-----ACTC---GGCCC---------------------------------------------CTATCCTGTAGCATCAGCGTAC------------------------------------------------------------------AAGCTCGCCG-AAGG--ACCGCT---AAACTCT------------------GTCTGACAGTG------TATTCTG-----AATGCTTCAACT--AAAT--AGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTC-GA-CCC-TGAAGCCCTAGT-TGCTTCGCGTTGGGACT-CTACTGGCTGCCC----TGTAGTTCCCTAATGACAGT-GGCGGAGTTCAGG-TGT--ACTCTCAGCGTA--GTA-----ATTT--------CTTCTCGCTTTTGC-AGTAG------CCTGGTCGCCG-GCCGTAAAACCCCCTATTTTCTA--------------GTG-GTT-GACCTC Hypoxylon_intermedium GGGATCATTA--CTGAGT--TCTTACCAAA----CTCCT----------------AA-CCCTT-TGT-GAACCGTACTGTC--GTTGCC-TCGGCGTGAGCTGCGGCT--------------------------------ACCC---GG-TAGC--------------------------------------------TACCCGGTAGTTTCCTACCCGGTAGCCACCCGGTAGCTTGCTC-------------------------------------------AAGGCCCGCCG-GTGG--ACCGCCC---AACTCT------------------GTTTTATAGTGT-----ATCTCTG-----AATGCTTCAACTGA-AATCAG-TTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-TGCTTAGCGTTGGGATT-CTACAGGGCTGTCC---TGTAGTTCCCTAAAATCAGT-GGCGGAGTGGGAG-CTC--ACTCGTAGCGTA--GTA-----CTTTTT------TTCTCGCTTCGGT--AGTGGCT-----CTGACTTTCG-GCCGTAAAACCCCCTATATTTTCA-------------AAG-GTT-GACCTC Hypoxylon_ochraceum GGGATCATTA--CTGAGT--TATTA-AAAAA---CTCCC-----------------A-CCCT-TTGT-GAAT-TTACTCTT--GTTGCC-TCGGCGTTGGGAAGCACCT-------------------------------ACCC---TG-GAGGAGCT--ACCCTGGAGGAGACC-----------------------TACCCTGGAGAAGATTACCCCTCAGTTGAGAGGACCTACCCTGGAGAAGTTTTTTTCCAC-AGCACCTACCCTGGAGATGCACTTTACACCACGCCG-GTGG--ACTTTA---TAACTCT------------------GTTTTTTCCAC---TGAATCTCTG------AAAAAATAACT--AAAT-CAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCATATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTC-AA-CCC-TTAAGCCCT-GT-TGCTTAGTGTTGGGTAT-CTACCCTGTAAAAG---AGTAGTTCCCTAAATGTAGT-GGCGGTGTTTAGG-GC---ACTGGTAGCGTA--GTA-----AATTTA------TTTCTCGCCTCTAA-AGTG------CCCTAGAAGCCT-GCCGTAAAATTATAAATATCTTATATTTATATATATCAAG-GTT-GACCTC Hypoxylon_papillatum GGGATCATTA--GCGAGT--TTA---CAAAA---CTCCC--------------AAAA-CCCTT-TGT-GAACCTTACCATT--GTTGCC-TCGGCGTGAGCCGCGGCTACCTGGTAGCT---------------------ACCC---TG-TAAT--TGTTACCCTGTAATGAT-------------------------TACCCGGGGAGCTACCCTGTAGTACGCGTG--------------------------------------------------------AAGGCCCGCCG-GTGGA-CCAC-T---AAACTCT------------------GTTTATCATTGT--GGA-ATTCTG-----AAT-ACTTAACT-GAAAT-ACGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTAACAA-CCC-TTAAGCCCTTGT-TGCTTAGTGTTGGGACT-CTACGGCCTTAGG---GCGTAGTTCCTTAAAGTTAGT-GGCGGAGTTAGGG-TAC--ACTCTCAGCGTA--GTA-----GTTATTT----TCTCGCTTTTGT----AGTG--GTC---CTAACGGCTA-GCCGTAAAACCCTTATATTCT---------------AGTG-GTT-GACCTC Hypoxylon_perforatum GGGATCATTA--CTGAGT--TCTA--CAAAA---CTCCC----------------AA-CCCT-TTGT-GAA--TTATACCTTAGTTGCC-TCGGCGTCGAGCGAGTCAACCT----------------------------ACCC---GG-GAGCT-----ACACTGGAGTCACC------------------------TACCCTGTAGAACCTACCCTGTAGACGGCTACCC--TGGAGCTACCCTGTAGTTGCACTT--------------------------TCGCGTCGCCG-GTGG--ACTACC---AAACTCTT-----------------ATATGTATAGTGT----ATCTCTG------AATTCTTAACA--AAATT-AGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCATATTGCGCCCAGTAGTATTCTACTGGGCATGCCTATTCGAGCGTCATTTC-AA-CCC-TTACGCCCT-GT-AGCGTAGTGTTAGGACT-CTACTCTTTAGAG----AGCAGTTCCCTAAAACCAGT-GGCAGTGTTCTGT-AC---ACTCATAGCGTA--GTA-----ATT---------CTTCTCGCTTCTGC-AGTGG-----CCCGTACTATTC-GCCGTAAAACCCCCTATTTTCTA--------------ATG-GTT-GACCTC Hypoxylon_rickii GGGATCATTA--AAGGGT--CGCGTGCATTG---CTCGCGGCTTACTGC----CAAA-CCCTA-TGT-GAAC-TTACCACT--GTTGCC-TCGGCGGCGCCGCGGCT---------------------------------ACCC---TG-GAGAGCT---ACCCTGTAGCCATTTACCCTGTAGATGGC---------TACCCTGTAGCTACCCTGTAGCTCGCAC-----------------------------GTA--------------------------AAGGCCCGTCA-AAGG--ACCCT----AAACTCT------------------ATTTTGACTTGGT----ATCTCTG-----AGTAAATCAACT--TAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTC-AA-CCCCTTAAGCCCT-GT-TGCTTAGCGTTGGGGGC-CTGCGCCTGGCGG----CGTAGCCCCTGAAAGATAGT-GGCGGAGTCAGTG-AGC--ACTCTGAGCGTA--GTA-----ACT---------TTTCTCGCTCCGGT-AGCTTGC---CCCTGGCTGCTG-GCCGTTAAACCCCCCCATATCTTCTA-----------GTG-GTT-GACCTC Kretzschmaria_clavus GGGATCATTA--ACGAGT--TTATA-TAA-----CTCCT---------------AAA-CCCA--TGT-GAAC-TTACCTTCT-GTTGCC-TCGGCAGGCAGATCCGCACCTCTT--------------------------ACCC---TG-TAGT------ACCT----------------------------------TACCCGGAACGAACCTGCTATTACATAGTAATAGAATT-CCAACCGGGATAGATAGGCCTACGTGGTAATAAAGTGCGCTCCCG--CCTGCCGGTGGACCA---TGAAAT---AAACTCT------------------GTTTAATAGCTGG----TATTCTG-----ATAATTATATGG--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTTAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCTTTGT-TGCTTAGTGTTGGGAGC-CTAC-GGCTTTCTCGC-CGTAGCTCCTTAAAGTTAGT-GGCGGAGTCGGTT-CAC--ACTCTAGGCGTA--GTA-----AATATTTT----CTCGCCTACGG----ATGGA-------CCGGTCCCCT-GCCGTAAAAAAAAACAAAATATATTTTATATC------AG-GTT-GACCTC Kretzschmaria_deusta GGGATCATTA--AAGAGT--TTGTTACAA-----CTCCT---------------AAA-CCCA--TGT-GAAC-TTACCTTCT-GTTGCC-TCGGCAGGCAGGTC-GCATCTTGCT-------------------------ACCC---TG-TAGG------ACCCTATCCTATAGTACCTT-ACAGGGGAAGGTAC---TACCCGGAGAGACCTACCCGGTAGAGAGATGCGGTGCCA-----------------------------------------------CCTGCCGGTGGACTG---AAAAAC---AAATTCT------------------GTTTAGTAAATGG----TATTCTG----AATCATTATATGG--AAATTAAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTTAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCTCTGT-TGCTTAGTGTTGGGAGC-CTACCGCATTCTTTGC-TGTAGCTCCTTAAAGTTAGT-GGCGGAGTCGGTT-CAC--ACTCTAGGCGTA--GTA-----AAGATTTT----ATTCTCGCCTGT---AGAGATGAG---CCGGTCCCCT-GCCGTAAAACACCCCCCTATTTTTTATA----------AG-GTT-GACCTC Nemania_aenea GGGATCATTA--CAGAGT--TAC---CAAAA---CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTCGC-GTTGCC-TCGGCAGGTGGCGTCCT---------------------------------ACCC---CG-TGAGACC-----------------------------------------TACCCTGTAGGACCTACCCGGTAGG-------------------------------------------------------------CGACCCTGCCG-ACGG--CCCCCG---AAACTCT------------------GTTTTTATAGCATTGG-ACTTCTG------AAAAGATAAC--TAAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCACTAGTATTCTGGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-TGCTTAGCGTTGGGAGC-CTACTGGAACTCTCC--TGTAGCTCTCCAAAGTCAGT-GGCGGAGCCGGTT-CGC--ACTCCAGACGTA--GTA-----GCTTTT------ACATATCGCCTGT--AGCTTGG---ACCCGGTCCCCT-GCCGTAAAACACCCCAAATCTTCT--------------AG-GTT-GACCTC Nemania_aenea_var._aureolutea GGGATCATTA--CAGAGT--TAC---CAAAA---CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTCGC-GTTGCC-TCGGCAGGTGGCGTCCT---------------------------------ACCC---CGTGAGA-CCT--ACCCTGTAGGACC-------------------------TACCCGGTAGGCG----------------------------------------ACCCT-----------------------------------GCCG-ACGG--CCCCCG---AAACTCT------------------GTTTTT-ATAGCATTGGACTTCTG------AAAAGATAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCACTAGTATTCTGGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-TGCTTAGCGTTGGGAGC-CTACTGGAACTCTC--CTGTAGCTCTCCAAAGTCAGT-GGCGGAGCCGGTT-CGC--ACTCCAGACGTA--GTA-----GCTTTTAC----ATATCGCCTGT----AGCTT-GGA--CCCGGTCCCCT-GCCGTAAAACACCCCAAATCTTCT--------------AG-GTT-GACCTC Nemania_bipapillata GGGATCATTA--GAGAGT--CTAAA-CAA-----CTCCC---------------AAA-CCCAC-TGT-GAAC-ATACCCTAC-GTTGCC-TCGGCAGGCGCCCGGCTCCGCG----------------------------ACCC---CTCGGGGCTGCG-------------------------------------------------------------------------------------GGGTG-GC-CCT-----------------------------------GCCG-GCGG--CCCACG---AAACTCTT-----------------GTCTAGCACTGAATTCTGAGCCCGAGAG--GGATAAAAACA--AAATT-AGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTC-AAACCC-TCAAGCCTC-GT-TGCTTGGTGTTGGGAGC-CTACGG----------CTGTAGCTCCTCAAAGTCAGT-GGCGTGGGCTGGCTCGC--ACCCCAGATGTA--GTA-----GTTATTT-----CTCTCACCTGT-----GGTC-GGG---CTAGTCCCCT-GCCGTAAAACCCCCCAGACTTTTT--------------AGTGTTTGACCTC Nemania_chestersii GGGATCATTA--CAGAGT--TAC---TAAAA---CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTCGC-GTTGCC-TCGGCAGGTCGCGTCCT---------------------------------ACCC---TGTACAT-CC-----------------------------------------TACCCTGGATAGACT--------------------TGCCCGGTGGTCGACTCTGCCCT-----------------------------------GCCG-ATGG--CTCATGC---AACTCT------------------GTTTCTCC-AGCATTGGACTTCTG------AAAAGTAAACT--AAAT-CAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCACCAGTATTCTGGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCTCGT-CGCTTAGCGTTGGGAGC-CTACTGGAACCTCTC-CTGTAGCTCCCCAAAGTCAGT-GGCGGAGCCGGCT-CGC--ACTCCAGACGTA--GTA-----GCTTTTAC----CTATCGCCTGT----AGCGT-GGA---CCGGTCCCCT-GCCGTAAAACCCCCCAATTCTTAT--------------AG-GTT-GACCTC Nemania_serpens_AJ390431 GGGATCATTA--CAGAGT--TAT---CAAAA---CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTCGC-GTTGCC-TCGGCAGGTGGCGTCCT---------------------------------ACCC---CGTGAGA------ACCTACCCCGCAAGGCC---------------------TACCCTGTAGGCCTTGCCCGGTGAGAACTT--------ACCCGGTGGCGGCTGACCCT-----------------------------------GCCG-ACGG--CCCCCG---AAACTCT------------------GTTTTTTATAGCATTGGACTTCTG------AAAAGATAACT--AAAT-CAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCACCAGTATTCTGGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-TGCTTAGCGTTGGGAGC-CTACTGGAGACACCTCCTGTAGCTCCCCAAAGTCAGT-GGCGGAGCCGGTT-CGC--ACTCCAGACGTA--GTA-----GCTTTTAC----ACATCGCCTGT----AGCGT-GGA--CCCGGCCCCCT-GCCGTAAAACACCCCAATTTTTAT--------------AG-GTT-GACCTC Nemania_serpens_AJ390432 GGGATCATTA--CAGAGT--TAT---CAAAA---CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTCGC-GTTGCC-TCGGCAGGTGGCGTCTC---------------------------------GCCC---CGTAAGA------ACC-----------------------------------TACCCTGTAGGAACGTACCCGGTAGACG-------------------------ACCCT-----------------------------------GCCG-ACGG--CCCCCG---AAACTCT------------------GTTTT--ATAGCATTAAACTTCTG------AAAACATAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCACTAGTATTCTGGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-TGCTTAGCGTTAGGAGC-CTACCGGAACTCTC--TGGTAGCTCCCCAAAGTCAGT-GGCGGAGCCGGTT-CGC--ACTCCAGACGTA--GTA-----GCTTTTAC----ACGTCGCCTGT----AGCGC-GGG---CCGGTCCCCT-GCCGTAAAACACCCCAATTTTTAT--------------AG-GTT-GACCTC Nemania_serpens_var._macrospora GGGATCATTA--CAGAGT--TAC---CAAAA---CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTCGC-GTTGCC-TCGGCAGGTGGCGTCCT---------------------------------ACCC---CGTGAG-------ACC-----------------------------------TACCCTGTAGGACC-TACCCGGTAGGCG-------------------------ACCCT-----------------------------------GCCG-ACGG--CCCCCG---AAACTCT------------------GTTTTT-ATAGCATTGGACTTCTG------ACAAGATAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCACTAGTATTCTGGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCTCGT-TGCTTAGCGTTGGGAGC-CTACTGGAACCCTC--CTGTAGCTCCCCAAAGTCAGT-GGCGGAGCCGGTT-CGC--ACTCCAGACGTA--GTA-----GCTTTTAC----ACATCGCCTGT----AGCGT-GGA--CCCGGTGCCCT-GCCGTAAAACACACCCAAATCTTAT-------------AG-GTT-GACCTC Whalleya_microplaca GGGATCATTA--ATGAGT--TAAAAAA-------CTCCT---------------AAA-CCCAC-TGT-GAAC-ATACCATTTTGTTGCC-TCGGCAGGTTGTGTTTGCCCTGTAGCTGCTACCCTGGACCT---------ACCC---TGGACCT------ACCCTGTAGCTACCTGGTA-----------------A-CACGTTTAACGGC---------------------------------------CTGCCG-----------------------------------GTGG-------TCTTCT---AAACTCTT-----------------GCTATACGTTGCG----AATTCTG----AACAAGTAAAACT--TAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCTACTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-GA-CCC-TTAAGCCTCTGT-TGCTTAGTGTTGGGAGC-CTACGGTTATAG-----CGTAGCTCCTTAAAGTTAGTTGGCGGAGTTAGGG-TAC--ACTCTCAGCGTA--GTA-----AACATTTT----TCTCGCTGTTGT---AGTTGCC------TTAGCTGTT-GCCATTAAACCTGTCTATTATTTAGTA-----------AG-GTT-GACCTC Xylaria_acuta GGGATCATTA--AAGAGT--TCTATAA-------CTCCCT-------------AAAA-CCCA--TGT-GAAC-ATACCTTAC-GTTGCC-TCGGCAGGTCGCGCCT--ACCCCGTAACGTCCT-----------------ACCC---TG-TAGGC-----ACC-----------------------------------TACCCGGTAGGCGC-------------------------------------------------------------------------GGGTAAGCCT-GCCGA-CGCCACG--AAACTCT------------------GTTT-AGTATTG-----AATTCTG------AACCTATAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGAT-AAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGTATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCTCTGT-TGCTTAGTGTTGGGAGC-CTACGGTA--------TAGTAGCTCCTCAAAGTTAGT-GGCAGAGTCGGTT-CAC--ACTCTAGACGTA--GTA-----GATTTT------ATTTCGCCTATT---AGTT--GGA---CTGGCCTCTT-GCCATAAAACCCCCTAAACTTTTTT-----------AAAG-GTT-GACCTC Xylaria_angulosa GGGATCATTA--CAGAGT--GTAAAAA-------CTCCC---------------AA--CCCA--TGT-GGAC-GTACCACGC-GTTGCC-TCGGC-GGTGCCCCTGTGGCCCCGCCGGCGGCCCTCTGA-----------ACTC---TTGTCTATA----ACCAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTG------AAACCATACG--TAAAT-ACGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCGCCAGCATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCAGT-TGCTTAGCGTTGGGCGC-CTGCCGTGACCG----CGGCAGCGCCCCAAATTCAGT-GGCGGAGCAGGCC-CTC-AGCTCCGGACGTA--GTA-----GCAC--------ATCTCGTCCGC----AGCCG-----GGCCCGTCCCCT-GCCGTAAAACCCCCCTATTTCTC--------------AAG-GTT-GACCTC Xylaria_apiculata GGGATCATTA--AAGAGT--TATTACAA------CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTTCT-GTTGCC-TCGGCAGGTCTGCAGCCTACCCTGTAAGCCCCT-----------------ACCC---TG-TAGGG-----ACCT----------------------------------TACCCGGTAGTTGC-------------------------------------------------------------------GGGTAAA-GCCTGCCG-GTGGT-CTACTC----AACTCT------------------GTTT-ATTAT-G----TTATTCTG-----AATACTATAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGAGTAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-TGCTTAGTGTTGGGAGC-CTACTGAAGACCCTT-CTGTAGCTCCTCAAAGTTAGT-GGCGGAGTCGGTTTCAC--ACTCTAGACGTA--GTA-----ACTTTT------ATCTCGCCTAT----AGAT--GCG---CCGGTCCCCT-GCCGTAAAACCCCCTAATTTCTA--------------AAG-GTT-GACCTC Xylaria_arbuscula GGGATCATTA--AAGAGT--TAATTACAA-----CTCCC---------------AAA-CCCA--TGT-GAAC-TTACCTTCT-GTTGC--TCGGCAGGTCGTGTTT--ACCCTGTGAGGTCCT-----------------ACCC---TG-TAGG------ACCC----------------------------------TACCTGGTAGACAC-------------------------------------------------------------------GGGT-AC-GCCTGCCG-GTGG--CCCATG---AAACTCT------------------GTTAATCTAT-G----TTATTCTG------AATCTATAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-TGCTTAGCGTTGGGAGC-CTACAGCCTT------CTGTAGCTCCCCAAAGTTAGT-GGCGGAGTCGGTT-CAC--ACTCTAGACGTA--GTA-----GATTCT------ATCTCGTCTGT----AGTG--AGG---CCGGTCCCCT-GCCGTAAAACCCCCCTAATTTTTA-------------AAG-GTT-GACCTC 'Xylaria cornu-damae' GGGATCATTA--AAGAGT--TATTATAAA-----CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCCTTT-GTTGCC-TCGGCAGGTCGCGCTT--ACCCCGTGAGA-CCTT----------------ACCC---TG-TAAG------GTCC----------------------------------TACCCGGTAGGCGC-------------------------------------------------------------------GGGT-AAC-CCTGCCG-GCGG--CCCATG---AAACTCT------------------GTTT-AGTATTG----TTATTCTG------AACCTATAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCTTTGT-TGCTTAGCGTTGGGAGC-CTACGCTT--------CTGTAGCTCCTTAAAGTTAGT-GGCGGAGTTAGTATCAC--ACTCTAGACGTA--GTA-----AATTT-------ATCTCGCCTAT----AGTT--GTA---CTGGTCCCTT-GCCATAAAACACCCCTAATTTTTA-------------AAG-GTT-GACCTC Xylaria_enteroleuca ----------------------------------CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTTAC-GTTGCC-TCGGCAGGTCGCGCCT--ACCTAGTAGCACCCT-----------------ACCC---TG-TAGG-------CC-----------------------------------TACCCGGGAGACGC-------------------------------------------------------------------GGGT-AA-GCCTGCCG-GCG---CCCACG---AAACTCT------------------GTTT-AATATTG-----AATTCTG------AACATATAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CAT-GAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCTCTGT-TGCTTAGCGTTGGGAGC-CTACAGCAC-------CTGTAGCTCCTCAAAGTTAGT-GGCGGAGTCGGTT-CAC--ACTCTAGACGTA--GTA-----ATTTT-------ATCTCGCCTATT---AGTT--GGA---CCGGTCTCCC-GCCGTAAAACCCCTATTTTTA----------------AAG-GTT-GACCTC Xylaria_fioriana GGGATCATTA--AAGAGT--TCTATAA-------CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTTAC-GTTGCC-TCGGCAGGTCGCGCCT--ACCCCGTAGCGCCCT-----------------ACCC---TG-TAGG-------CC-----------------------------------TACCCGGAAGTGC--------------------------------------------------------------------GGGT-AA-GCCTGCCG-GCG---CCCACG---AAACTCTT-----------------GTTTAACCATCTG---CATCTCTG------AAAACATAACT--AAAT-ACGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGAT-AAGAACGGAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCTTGT-TGCTTAGCGTTGGGAGC-CTACGCAGAAAG----CGCTAGCTCCTCAAAACCAGT-GGCGGAGTCGGTT-CAC--ACTCTAGACGTA--GTA-----AATCTC------ATCTCGCCTATT---AGTT--GGA---CCGGTCCCCT-GCCGTAAAACCCCCCTATTCTTAA-------------AAG-GTT-GACCTC Xylaria_hypoxylon GGGATCATTA--AAGAGT--GTAATAAAA-----CTCCT---------------AAA-CCCC--TGTGGAAC-TTATATTGG-TTTGAC-GCAGCAGATAGCGTCT--ACCTCGCGGGCTCCT-----------------ACCT---TGGTAGG--AGCTTGCAAGGTGGGCGCAGGTCTGTTTTTCCATATTCGTAAGGCTCTCTCTTTTATTAGAGAGCGGTCTGCGC-AGTGGACGCAGTTAGTTACTT-ACGTT---------------------------GCGACATCGCAAGCGTTATTGTAC--AAATACTGTGGAGGTCACATAAACCGTTT-ACTGTTA-----TAATCTG---------AAATATAT-AAAAC-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-TGCTTAGCGTTGGGAGC-CTACAGCCTG------CTGTAGCTCCTTAAAGGTAGT-GGCGGAGTCGGTT-CAC--ACTCTAGACGTA--GTA-----AAATCTTT----ATCTCGCCT------ATGGATGAG---CCGGCGCCTT-GCCGTAAAACCCCTAATCTTTCAC-------------AAG-GTT-GACCTC Xylaria_longipes GGGATCATTA--AAGAGT--TCTATAA-------CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTTAC-ATTGCC-TCGGCAGGTCGTGCCT--ACCCCGTAGCGTCCT-----------------ACCC---TG-TAGG------ACC-----------------------------------TACCCGGTAGACGC-------------------------------------------------------------------------GGGTAAGCCT-GCCGGCGCCCACG--AAACTCT------------------GTTT-AGTATTG-----AATTCTG------AACCTATAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-TGCTTAGTGTTGGGAGC-CTACGGTAA-------TAGTAGCTCCTGAAAGTTAGT-GGCGGAGTCGGTT-CAC--ACTCTAGACGTA--GTA-----GATTTT------ATCTCGCCTATC---AGTT--GGA---CCGGTCCCTT-GCCGTAAAACCACCTAATTTCT--------------AAAG-GTT-GACCTC Xylaria_mali GGGATCATTA--AAGAGT--TTT-GATAA-----CTCCC---------------AAA-CCCA--TGT-GAAC-TTACCTTCT-GTTGCC-TCGGCAGGTCGCGTCT--ACCCTGTGGCA-CCT-----------------ACCC---TG-TAGG------ACCC----------------------------------GACCTGGTGGTCGC-------------------------------------------------------------------GGTC-AT-GCCTGCCG-GTGG--CCCTTT---AAACTTT------------------CTGT--GTATTCTATGTTATTCTG------AGTTGGCAACT-AAAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCCCTGT-CGCTTAGTGTTGGGAGC-CTACAGTCTT------CTGTAGCTCCCTAAAGTTAGT-GGCGGAGTCGGTT---C--ACTCTAGACGTA--GTA-----GATCT-------ATCTCGTCTAT----AGTT--AAG---CCGGTCTCTT-GCCGTAAAACCCCC-TAATTTCTC-------------AAG-GTT-GACCTC Xylaria_polymorpha GGGATCATTA--AAGAGT--TCTATAA-------CTCCC---------------AAA-CCCA--TGT-GAAC-ATACCTTAC-GTTGCCCTCGGCAGGTCGCG-CT--ATCCCGTAGCGTCCT-----------------ACCC---TG-TAGG------ACC-----------------------------------TACCCGGTAGACGC-------------------------------------------------------------------GGGT-AA-GCCTGCCG-GCGG--CCCACA---AAACTCT------------------GTTTAA-TATTG-----AATTCTG------AACCTATAACT--AAAT-AAGTTA-AAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTC-AA-CCC-TTAAGCCTCTGT-TGCTTAGTGTTGGGAGC-CTACGGCAC-------CCGTAGCTCCTCAAAGTTAGT-GGCGGAGTCGGTT-CAC--ACTCTAGACGTA--GTA-----ATTTTT------ATCTCGCCTATC---AGTT--GGA---CCGGTCCCCT-GCCGTAAAACCCCCCATTTTTA---------------AAG-GTT-GACCTC ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = Termite_Fungus_ITS_rDNA) = N: 1-771; CODONPOSSET CodonPositions (CHARACTERS = Termite_Fungus_ITS_rDNA) = N: 1-771; END; BEGIN TREES; TITLE Tb8208; LINK TAXA = Taxa1; TRANSLATE 1 Xylaria_polymorpha, 2 Xylaria_mali, 3 Xylaria_longipes, 4 Xylaria_hypoxylon, 5 Xylaria_fioriana, 6 Xylaria_enteroleuca, 7 'Xylaria cornu-damae', 8 Xylaria_arbuscula, 9 Xylaria_apiculata, 10 Xylaria_angulosa, 11 Xylaria_acuta, 12 Whalleya_microplaca, 13 Fungus_NBRC_102095_AB27813, 14 Nemania_serpens_var._macrospora, 15 Nemania_serpens_AJ390432, 16 Nemania_serpens_AJ390431, 17 Nemania_chestersii, 18 Nemania_bipapillata, 19 Nemania_aenea_var._aureolutea, 20 Nemania_aenea, 21 Kretzschmaria_deusta, 22 Kretzschmaria_clavus, 23 Hypoxylon_rickii, 24 Hypoxylon_perforatum, 25 Hypoxylon_papillatum, 26 Hypoxylon_ochraceum, 27 Hypoxylon_intermedium, 28 Hypoxylon_fuscum_AJ390404, 29 Hypoxylon_fuscum_AF201715, 30 Hypoxylon_fragiforme_AJ390401, 31 Hypoxylon_fragiforme_AF201709, 32 Hypoxylon_fendleri, 33 Hypoxylon_cohaerens_var._microsporum, 34 Hypoxylon_cinnabarinum, 35 Hypoxylon_annulatum, 36 Diatrype_disciformis, 37 Creosphaeria_sassafra, 38 Camillea_tinctor, 39 Camillea_obularia, 40 Biscogniauxia_repanda, 41 Biscogniauxia_nummularia, 42 Biscogniauxia_mediterranea_AJ390413, 43 Biscogniauxia_mediterranea_AF280624, 44 Biscogniauxia_marginata, 45 Biscogniauxia_atropunctata; TREE Fig._16 = [&R] (((((((((((((((13,10),18),(17,(15,(14,16,(19,20))))),5),(6,1)),(9,3)),(7,11)),(2,8)),4),(22,21)),12),((((((24,26),32),((23,34),33)),25),35),(((28,29),27),(31,30)))),37),(((((43,42),38),45,39),41),(44,40))),36); END;