#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 25, 2021; 18:01 GMT TreeBASE (cc) 1994-2008 Study reference: Jansen R.K., & Palmer J. 1988. Phylogenetic implications of chloroplast DNA restriction site variation in the Mutisieae (Asteraceae). American Journal of Botany, 75: 753-766. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S330] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=22; TAXLABELS Acourtia_microcephala Ainsliaea_dissecta Barnadesia_caryophylla Carthamnus_tinctorius Cephalaria_leucantha Chuquiragua_oppositifolia Dasyphyllum_diacanthoides Dipsacaceae Dipsacus_sativus Gerbera_jamesonii Gochnatia_pauciflora Helianthus_annuus Lactuca_sativa Leibnitzia_seemannii Mutisia_acuminata Onoseris_hyssopifolia Pentas_lanceolata Perezia_multiflora Psychotria_bacteriophila Rubiaceae Stifftia_chrysantha Trixis_californicum ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=13; TAXLABELS Acourtia_microcephala Ainsliaea_dissecta Barnadesia_caryophylla Dasyphyllum_diacanthoides Gerbera_jamesonii Gochnatia_pauciflora Lactuca_sativa Leibnitzia_seemannii Mutisia_acuminata Onoseris_hyssopifolia Perezia_multiflora Rubiaceae Stifftia_chrysantha ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1645] TITLE Table_4; LINK TAXA = Taxa2; DIMENSIONS NCHAR=117; FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -; CHARSTATELABELS 1 Ava_I, 2 Ava_I, 3 Ava_I, 4 Ava_I, 5 Ava_I, 6 Ava_I, 7 Ava_I, 8 Ava_I, 9 Ava_I, 10 Bam_HI, 11 Bam_HI, 12 Bam_HI, 13 Bam_HI, 14 Bam_HI, 15 Ban_I, 16 Ban_I, 17 Ban_I, 18 Ban_II, 19 Ban_II, 20 Ban_II, 21 Ban_II, 22 Ban_II, 23 Bcl_I, 24 Bcl_I, 25 Bcl_I, 26 Bcl_I, 27 Bcl_I, 28 Bcl_I, 29 Bcl_I, 30 Bcl_I, 31 Bcl_I, 32 Bcl_I, 33 Bgl_II, 34 Bgl_II, 35 Bgl_II, 36 Bgl_II, 37 Bgl_II, 38 Bgl_II, 39 Bst_NI, 40 Bst_NI, 41 Bst_NI, 42 Bst_NI, 43 Bst_NI, 44 Bst_NI, 45 Bst_NI, 46 Bst_NI, 47 Bst_NI, 48 Bst_NI, 49 Bst_NI, 50 Bst_NI, 51 Bst_XI, 52 Bst_XI, 53 Bst_XI, 54 Bst_XI, 55 Bst_XI, 56 Bst_XI, 57 Cla_I, 58 Cla_I, 59 Cla_I, 60 Cla_I, 61 Cla_I, 62 Cla_I, 63 Cla_I, 64 Cla_I, 65 Cla_I, 66 Eco_RI, 67 Eco_RI, 68 Eco_RI, 69 Eco_RI, 70 Eco_RI, 71 Eco_RI, 72 Eco_RI, 73 Eco_RI, 74 Eco_RI, 75 Eco_RI, 76 Eco_RV, 77 Eco_RV, 78 Eco_RV, 79 Eco_RV, 80 Eco_RV, 81 Eco_RV, 82 Eco_RV, 83 Eco_RV, 84 Hae_II, 85 Hae_II, 86 Hae_II, 87 Hgi_AI, 88 Hgi_AI, 89 Hgi_AI, 90 Hgi_AI, 91 Hgi_AI, 92 Hgi_AI, 93 Hgi_AI, 94 Hgi_AI, 95 Hinc_II, 96 Hinc_II, 97 Hinc_II, 98 Hinc_II, 99 Hind_III, 100 Hind_III, 101 Hind_III, 102 Nco_I, 103 Nco_I, 104 Nsi_I, 105 Nsi_I, 106 Nsi_I, 107 Nsi_I, 108 Nsi_I, 109 Xba_I, 110 Xba_I, 111 Xba_I, 112 Xba_I, 113 Xba_I, 114 Xba_I, 115 Xba_I, 116 Xba_I, 117 Xho_I, ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 ] [ . . . . . . . . . . . ] Acourtia_microcephala 001010000010110000000010010001000000100100001001011010010000110100000001000000000100010101001001100100000010101000000 Ainsliaea_dissecta 001000010000000101010010010000000000001000101110011011010100100000000000010100100100010000100001010000000000001000100 Barnadesia_caryophylla 010000100101001010101000100000011100000011010000100000001101000000110000000000001000000010100110000111010101010110000 Dasyphyllum_diacanthoides 011000100101001000101000100000011101000011010010100000001001000000110100000000001000000010100010000001110101010110000 Gerbera_jamesonii 101011001010010001000111011111100011100000001000011010110110110011001011101000010111110001001101001101001011001001111 Gochnatia_pauciflora 001000010000000101000010010001000000001000001000011011010000100000001000010000000100010000000001000001000010001000100 Lactuca_sativa 001000010010100001010010010011001000001000000000010100010100000000000000000011000100011000000000010000000010001001100 Leibnitzia_seemannii 101111001000010001000111011111100001100000001000011110110110110001001111101000010111110001011101001101101011001001111 Mutisia_acuminata 001010000010010001000010010001000010100000001101011010010100110100000001101000010100010101001001000101000010001000100 Onoseris_hyssopifolia 001100010000000011000010000001000000110000101000011010010000101000001001000101100100010001000001000000000010001000100 Perezia_multiflora 001010001010110000000010010000000000110100001000011000010100110100000111000011000100011101001000100110000010101001100 Rubiaceae 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 Stifftia_chrysantha 001000010000100001001010010101000000000000101000011011010000101010001001000100000100010000010001000000000010001000100 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1633] TITLE Table_3; LINK TAXA = Taxa1; DIMENSIONS NCHAR=55; FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -; CHARSTATELABELS 1 Ava_I, 2 Ava_I, 3 Ava_I, 4 Ava_I, 5 Ava_I, 6 Ava_I, 7 Ava_I, 8 Ava_I, 9 Ava_I, 10 Ava_I, 11 Ava_I, 12 Bam_HI, 13 Bam_HI, 14 Bam_HI, 15 Bam_HI, 16 Bam_HI, 17 Ban_I, 18 Ban_I, 19 Ban_I, 20 Ban_I, 21 Ban_I, 22 Bst_XI, 23 Bst_XI, 24 Bst_XI, 25 Bst_XI, 26 Bst_XI, 27 Bst_XI, 28 Bst_XI, 29 Eco_RV, 30 Eco_RV, 31 Eco_RV, 32 Eco_RV, 33 Eco_RV, 34 Eco_RV, 35 Eco_RV, 36 Eco_RV, 37 Eco_RV, 38 Hae_II, 39 Hae_II, 40 Hae_II, 41 Hind_III, 42 Hind_III, 43 Hind_III, 44 Nco_I, 45 Nco_I, 46 Nsi_I, 47 Nsi_I, 48 Nsi_I, 49 Nsi_I, 50 Nsi_I, 51 Nsi_I, 52 Sac_I, 53 Sac_I, 54 Sac_I, 55 Sac_I, ; MATRIX [ 10 20 30 40 50 ] [ . . . . . ] Acourtia_microcephala 0010010000001011000000101001000000010001010000000100000 Ainsliaea_dissecta 0000000010000000000100101101101000010001000000000000000 Barnadesia_caryophylla 0100000100010100111010000000000000100000011101010010011 Carthamnus_tinctorius 0011000010000000100000110001010001010001001000000100000 Cephalaria_leucantha 0000000000000000000000000000000000000000000000000000000 Chuquiragua_oppositifolia 0110000100010100011000000000000011100000000101011010001 Dasyphyllum_diacanthoides 0100000100010100001000000000000001100000000111010010001 Dipsacaceae 0000000000000000000000000000000000000000000000000000000 Dipsacus_sativus 0000000000000000000000000000000000000000000000000000000 Gerbera_jamesonii 1010011001001001000000101011000100011111110100101110010 Gochnatia_pauciflora 0010000010000000000100101101100000010001000100000100000 Helianthus_annuus 0010000010000000000001110001010000010001000010000100000 Lactuca_sativa 0010000010001010000001010001010010010001000000000101000 Leibnitzia_seemannii 1010111001000001000000111011000100011111110110100110110 Mutisia_acuminata 0010010000001001000000101001000100010001010100000100000 Onoseris_hyssopifolia 0010100010000000000010101001001010010001000000000100000 Pentas_lanceolata 0000000000000000000000000000000000000000000000000000000 Perezia_multiflora 0001010001101011000000100001010010010001011000000101000 Psychotria_bacteriophila 0000000000000000000000000000000000000000000000000000000 Rubiaceae 0000000000000000000000000000000000000000000000000000000 Stifftia_chrysantha 0010000010000010000000101101100000010001000000000100101 Trixis_californicum 0011010000101011000000101001000000010001010000000100000 ; END; BEGIN TREES; TITLE Tb5104; LINK TAXA = Taxa1; TRANSLATE 1 Dipsacaceae, 2 Rubiaceae, 3 Barnadesia_caryophylla, 4 Chuquiragua_oppositifolia, 5 Dasyphyllum_diacanthoides, 6 Ainsliaea_dissecta, 7 Gochnatia_pauciflora, 8 Stifftia_chrysantha, 9 Onoseris_hyssopifolia, 10 Gerbera_jamesonii, 11 Leibnitzia_seemannii, 12 Mutisia_acuminata, 13 Acourtia_microcephala, 14 Perezia_multiflora, 15 Trixis_californicum, 16 Lactuca_sativa, 17 Helianthus_annuus, 18 Carthamnus_tinctorius, 19 Cephalaria_leucantha, 20 Dipsacus_sativus, 21 Pentas_lanceolata, 22 Psychotria_bacteriophila; TREE Fig._2 = [&R] ((1,2),(((3,4),5)Barnadesiinae,(((((6,7),8),9)Gochnatiinae,(((10,11),12)Mutisiinae,(13,(14,15))Nassauviinae)),(17,(16,18))))Asteraceae); TREE Fig._3 = [&R] ((1,2),(((3,4),5),(((((6,7),8),9),(((10,11),12),(13,(14,15)))),(17,(16,18))))); END; BEGIN TREES; TITLE Tb5105; LINK TAXA = Taxa2; TRANSLATE 1 Rubiaceae, 2 Barnadesia_caryophylla, 3 Dasyphyllum_diacanthoides, 4 Ainsliaea_dissecta, 5 Gochnatia_pauciflora, 6 Stifftia_chrysantha, 7 Onoseris_hyssopifolia, 8 Gerbera_jamesonii, 9 Leibnitzia_seemannii, 10 Mutisia_acuminata, 11 Acourtia_microcephala, 12 Perezia_multiflora, 13 Lactuca_sativa; TREE Fig._4 = [&R] (1,((2,3),(((4,5),((6,7),(((8,9),10),(11,12)))),13))); TREE Fig._5 = [&R] (1,((2,3),((((4,5),(6,7)),(((8,9),10),(11,12))),13))); END;