#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on July 11, 2025; 12:56 GMT

TreeBASE (cc) 1994-2008

Study reference:
Mcdill J.R., & Simpson B. 2010. Molecular phylogeny of Linaceae with complete generic
sampling and data from two chloroplast genes.. Botanical Journal of the Linnean
Society, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S10826]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=92;
        TAXLABELS
            Acalypha_insulana
            Albizia_sp.
            Anisadenia_khasyana
            Anisadenia_pubescens
            Anisadenia_saxatilis
            Balanops_pancheri
            Bischofia_javanica
            Bruguiera_gymnorhiza
            Byrsonima_crassifolia
            Camptostylus_mannii
            Cliococca_selaginoides
            Clusia_rosea
            Cratoxylum_cochinchinense
            Ctenolophon_englerianus
            Datisca_cannabina
            Drypetes_littoralis
            Elatine_triandra
            Erythroxylum_novocaledonicum
            Euonymus_hamiltonianus
            Euphorbia_humifusa
            Euphronia_guianensis
            Flacourtia_indica
            Flueggea_virosa
            Garcinia_subelliptica
            Gomphia_serrata
            Hebepetalum_humiriifolium
            Hebepetalum_neblinae
            Hesperolinon_clevelandii
            Hesperolinon_disjunctum
            Hesperolinon_drymarioides
            Hesperolinon_micranthum
            Hugonia_busseana
            Hugonia_castaneifolia
            Hugonia_gabunensis
            Hugonia_jenkinsii
            Hugonia_longipes
            Hugonia_mystax
            Hugonia_neocaledonica
            Hugonia_obtusifolia
            Hugonia_orientalis
            Hugonia_penicillanthemum
            Hugonia_planchoni
            Hugonia_spicata
            Humiria_balsamifera
            Indorouchera_griffithiana
            Ionidium_commune
            Irvingia_malayana
            Ixonanthes_reticulata
            Jatropha_integerrima
            Kerria_japonica
            Kiggelaria_africana
            Lacistema_aggregatum
            Linum_arboreum
            Linum_berlandieri
            Linum_bienne
            Linum_catharticum
            Linum_comptonii
            Linum_flavum
            Linum_hirsutum
            Linum_hypericifolium
            Linum_lewisii
            Linum_monogynum
            Linum_narbonense
            Linum_nervosum
            Linum_oligophyllum
            Linum_perenne
            Linum_pratense
            Linum_rupestre
            Linum_suffruticosum
            Linum_usitatissimum
            Linum_volkensii
            Lunania_parviflora
            Malpighia_glabra
            Manihot_esculenta
            Oxalis_corniculata
            Passiflora_quadrangularis
            Philbornea_magnifolia
            Phyllanthus_flexuosus
            Pimelodendron_griffithianum
            Quercus_rubra
            Radiola_linoides
            Reinwardtia_indica
            Ricinus_communis
            Roucheria_calophylla
            Roucheria_monsalveae
            Roucheria_schomburgkii
            Sacoglottis_sp.
            Scagea_oligostemon
            Sclerolinon_digynum
            Tirpitzia_ovoidea
            Tirpitzia_sinensis
            Trigonia_boliviana
            ;
END;

BEGIN TREES;
      TITLE rbcL_and_Combo_TB;
      LINK TAXA = Taxa;
      TREE RBCLbestREP9 = [&R] (Datisca_cannabina:0.03793672,(Kerria_japonica:0.03975837,(Quercus_rubra:0.03796319,Albizia_sp.:0.03627609):0.0026177):0.00103636,((Euonymus_hamiltonianus:0.05161283,Oxalis_corniculata:0.06071836):0.00405964,((Irvingia_malayana:0.04539751,(Elatine_triandra:0.03903172,((Cratoxylum_cochinchinense:0.0495754,(Clusia_rosea:0.00946524,Garcinia_subelliptica:0.01995428):0.02423973):0.01425897,((Euphorbia_humifusa:0.03227762,Pimelodendron_griffithianum:0.01387124):0.00501089,(Ricinus_communis:0.01501062,(Jatropha_integerrima:0.01826235,(Acalypha_insulana:0.03819828,Manihot_esculenta:0.01916001):5.7477E-4):0.00321727):1.0E-8):0.00879116):7.8087E-4):0.00323752):0.00256307,(Drypetes_littoralis:0.06470439,(((Humiria_balsamifera:0.00261375,Sacoglottis_sp.:0.00535859):0.00269666,(((Bruguiera_gymnorhiza:0.02477194,Erythroxylum_novocaledonicum:0.03036222):0.00961145,(Gomphia_serrata:0.02974513,Ixonanthes_reticulata:0.04225924):0.0044856):3.6587E-4,((Byrsonima_crassifolia:0.01656175,Malpighia_glabra:0.02090096):0.01603053,(Bischofia_javanica:0.02533084,(Flueggea_virosa:0.00430061,Phyllanthus_flexuosus:0.0158881):0.0290566):0.00839919):0.00298116):0.0021555):0.00173772,(Ctenolophon_englerianus:0.02756893,(((Flacourtia_indica:0.0196031,Lunania_parviflora:0.02225367):0.00678989,(Kiggelaria_africana:0.01942519,((Camptostylus_mannii:0.01822166,Lacistema_aggregatum:0.02125807):0.00185911,(Ionidium_commune:0.07195152,Passiflora_quadrangularis:0.05213351):0.00987989):0.00227322):1.0E-8):0.00177751,((Scagea_oligostemon:0.03812342,(Trigonia_boliviana:0.03800443,(Balanops_pancheri:0.00852234,Euphronia_guianensis:0.04789006):0.00553071):0.00442186):0.00649319,(((Hebepetalum_neblinae:1.0E-8,Hebepetalum_humiriifolium:1.0E-8):8.6322E-4,(((Indorouchera_griffithiana:0.00126887,Philbornea_magnifolia:0.0061675):0.00242226,(Hugonia_jenkinsii:0.00350467,(Hugonia_neocaledonica:8.9011E-4,Hugonia_penicillanthemum:1.0E-8):8.8544E-4):0.00443664):1.0E-8,((Roucheria_calophylla:8.6425E-4,(Roucheria_schomburgkii:0.00896889,Roucheria_monsalveae:1.0E-8):1.0E-8):0.00173103,((Hugonia_mystax:1.0E-8,Hugonia_longipes:8.7961E-4):0.0017612,((Hugonia_obtusifolia:1.0E-8,Hugonia_spicata:0.00173817):0.00261474,((Hugonia_gabunensis:8.6654E-4,Hugonia_planchoni:1.0E-8):8.6197E-4,(Hugonia_orientalis:1.0E-8,(Hugonia_castaneifolia:1.0E-8,Hugonia_busseana:1.0E-8):1.0E-8):1.0E-8):8.7392E-4):8.4323E-4):8.886E-4):8.6174E-4):8.701E-4):1.0E-8,(((Linum_hirsutum:1.0E-8,Linum_hypericifolium:1.0E-8):0.01795381,((Linum_nervosum:0.00669711,(Linum_perenne:1.0E-8,(Linum_lewisii:1.0E-8,Linum_pratense:8.6698E-4):0.00137193):0.01039609):0.00170256,(Linum_narbonense:0.00563976,(Linum_monogynum:0.00788199,(Linum_bienne:1.0E-8,Linum_usitatissimum:1.0E-8):0.00455387):0.00450126):0.00364297):0.00325912):0.00945499,(((Tirpitzia_sinensis:0.00175283,Tirpitzia_ovoidea:1.0E-8):0.00528429,(Reinwardtia_indica:0.00855792,(Anisadenia_pubescens:0.00393309,(Anisadenia_khasyana:1.0E-8,Anisadenia_saxatilis:1.0E-8):0.00223014):0.00443378):0.0021552):8.3392E-4,(Radiola_linoides:0.01316905,((Linum_catharticum:0.00534792,((Linum_suffruticosum:0.00602769,Linum_volkensii:0.00763498):0.00222087,(Linum_flavum:0.00454459,Linum_arboreum:0.00494978):0.00484949):8.9936E-4):1.0E-8,(Sclerolinon_digynum:0.00487543,((Hesperolinon_drymarioides:0.00341016,(Hesperolinon_micranthum:0.00725516,(Hesperolinon_clevelandii:1.0E-8,Hesperolinon_disjunctum:8.9562E-4):0.00358521):0.00105455):0.00233289,((Linum_berlandieri:0.00622516,Linum_rupestre:8.8009E-4):1.0E-8,(Linum_comptonii:0.00263863,(Cliococca_selaginoides:8.7722E-4,Linum_oligophyllum:0.0119111):1.0E-8):0.00176377):0.00134311):0.00345691):0.00506563):0.00328392):0.00561755):6.3682E-4):0.0190176):0.0272427):4.865E-4):1.0E-8):8.137E-4):1.0E-8):1.0E-8):0.01245204):0.00335724);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr21391]


END;