#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 18, 2025; 23:39 GMT

TreeBASE (cc) 1994-2008

Study reference:
Green A.F., Ramsey T.S., & Ramsey J. 2010. Phylogeny and Biogeography of Ivies (Hedera
spp., Araliaceae),  a Polyploid Complex of Woody Vines. Systematic Botany,
.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S11014]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=39;
        TAXLABELS
            Brassaia_actinophylla_C11FR
            Brassaia_actinophylla_F12FR
            Fatsia_japonica_C6FR
            Fatsia_japonica_F6FR
            Hedera_algeriensis_H_a0
            Hedera_algeriensis_H_a10
            Hedera_algeriensis_H_a2
            Hedera_algeriensis_H_a9
            Hedera_azorica_Pico_b0
            Hedera_azorica_Sao_Miguel_a0
            Hedera_colchica_H_a0
            Hedera_colchica_H_a3
            Hedera_colchica_H_a4
            Hedera_colchica_H_a8
            Hedera_cypria_H_a0
            Hedera_helix_Baltica_a0
            Hedera_helix_Baltica_b0
            Hedera_helix_Emerald_Gem_a6
            Hedera_helix_Emerald_Gem_b0
            Hedera_helix_subsp._caucausigena_H_a1
            Hedera_hibernica_H_b0
            Hedera_hibernica_H_b2
            Hedera_hibernica_H_b4
            Hedera_hibernica_hibernica_b0
            Hedera_hibernica_hibernica_b3
            Hedera_maderensis_H_a11
            Hedera_maderensis_H_a12
            Hedera_maroccana_H_a0
            Hedera_maroccana_S2_H_b1
            Hedera_maroccana_sample2_H_a0
            Hedera_nepalensis_var_sinensis_H_a0
            Hedera_pastuchovii_H_a0
            Hedera_pastuchovii_sample2_H_a0
            Hedera_pastuchovii_sample2_H_a7
            Hedera_rhombea_H_a5
            Hedera_rhombea_Pierot_a5
            Polyscias_fruticosa_C8FR
            Polyscias_fruticosa_G8FR
            Trevesia_sundaica_F10FR
            ;
END;

BEGIN TREES;
      TITLE GBSSI_low_copy_nDNA;
      LINK TAXA = Taxa;
      TREE PAUP_1 = [&R] (((((((Hedera_algeriensis_H_a0:0.0,(Hedera_azorica_Sao_Miguel_a0:0.0,(Hedera_colchica_H_a0:0.0,(Hedera_cypria_H_a0:0.0,(Hedera_helix_Baltica_a0:0.0,(Hedera_maroccana_H_a0:0.0,(Hedera_maroccana_sample2_H_a0:0.0,(Hedera_nepalensis_var_sinensis_H_a0:0.0,(Hedera_pastuchovii_H_a0:0.0,(Hedera_pastuchovii_sample2_H_a0:0.0,(Hedera_helix_subsp._caucausigena_H_a1:1.0,((((((Hedera_algeriensis_H_a2:1.0,Hedera_colchica_H_a4:1.0):0.0,(Hedera_maderensis_H_a11:0.0,Hedera_maderensis_H_a12:1.0):1.0):0.0,(Hedera_colchica_H_a8:2.0,(Hedera_algeriensis_H_a9:0.0,Hedera_algeriensis_H_a10:1.0):2.0):0.0):0.0,Hedera_helix_Emerald_Gem_a6:1.0):0.0,Hedera_pastuchovii_sample2_H_a7:1.0):0.0,(Hedera_rhombea_H_a5:0.0,Hedera_rhombea_Pierot_a5:0.0):1.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0,((((((Hedera_azorica_Pico_b0:0.0,Hedera_maroccana_S2_H_b1:1.0):0.0,Hedera_helix_Emerald_Gem_b0:0.0):0.0,Hedera_helix_Baltica_b0:0.0):0.0,Hedera_hibernica_H_b0:0.0):0.0,Hedera_hibernica_hibernica_b0:0.0):0.0,(Hedera_hibernica_hibernica_b3:1.0,(Hedera_hibernica_H_b2:0.0,Hedera_hibernica_H_b4:2.0):1.0):0.0):1.0):0.0,Hedera_colchica_H_a3:1.0):12.0,Fatsia_japonica_F6FR:7.0):2.0,(Brassaia_actinophylla_C11FR:0.0,Brassaia_actinophylla_F12FR:0.0):15.0):1.0,(Fatsia_japonica_C6FR:2.0,Trevesia_sundaica_F10FR:1.0):0.0):0.0,(Polyscias_fruticosa_C8FR:0.0,Polyscias_fruticosa_G8FR:1.0):20.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr25796]


END;