#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on July 16, 2025; 12:49 GMT

TreeBASE (cc) 1994-2008

Study reference:
Chapman J.R., Taylor R.K., Weir B.S., Romberg M.K., Vanneste J.L., & Alexander B.J.
2012. Phylogenetic relationships among global populations of Pseudomonas syringae
pv. actinidiae. Phytopathology, 102(11): 1034–1044.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S11869]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=19;
        TAXLABELS
            Pseudomonas_syringae_pv._actinidiae_I.27.4.10.D1__Italy
            'Pseudomonas syringae pv. actinidiae I.6.5.10.4-4  Italy'
            Pseudomonas_syringae_pv._actinidiae_ICMP_9855__Japan
            Pseudomonas_syringae_pv._actinidiae_KACC_10584__South_Korea
            Pseudomonas_syringae_pv._actinidiae_KACC_10594__South_Korea
            Pseudomonas_syringae_pv._actinidiae_KACC_10754__South_Korea
            Pseudomonas_syringae_pv._actinidiae_MAFF_302091__Japan
            Pseudomonas_syringae_pv._actinidiae_MAFF_302143__Japan
            Pseudomonas_syringae_pv._actinidiae_MAFF_302145__Japan
            'Pseudomonas syringae pv. actinidiae T10_04758 New Zealand'
            'Pseudomonas syringae pv. actinidiae T10_04782 New Zealand'
            'Pseudomonas syringae pv. actinidiae T10_04976 New Zealand'
            'Pseudomonas syringae pv. actinidiae T10_05163 New Zealand'
            'Pseudomonas syringae pv. actinidiae T10_05188 New Zealand'
            'Pseudomonas syringae pv. actinidiae T10_05195 New Zealand'
            'Pseudomonas syringae pv. actinidiae T10_05196 New Zealand'
            'Pseudomonas syringae pv. actinidiae T10_05454 New Zealand'
            'Pseudomonas syringae pv. actinidiae T10_06115 New Zealand'
            'Pseudomonas syringae pv. actinidiae T11_0918 New Zealand'
            ;
END;

BEGIN TREES;
      TITLE Pseudomonas_syringae_pv._actinidiae_MB;
      LINK TAXA = Taxa;
      TREE con_50_majrule = [&R] (('Pseudomonas syringae pv. actinidiae T10_05188 New Zealand':2.33E-4,'Pseudomonas syringae pv. actinidiae T10_05195 New Zealand':2.35E-4,'Pseudomonas syringae pv. actinidiae T10_05163 New Zealand':2.32E-4,'Pseudomonas syringae pv. actinidiae T10_04976 New Zealand':2.35E-4,'Pseudomonas syringae pv. actinidiae T10_05196 New Zealand':2.37E-4):0.005762,((Pseudomonas_syringae_pv._actinidiae_KACC_10584__South_Korea:2.34E-4,Pseudomonas_syringae_pv._actinidiae_KACC_10754__South_Korea:2.33E-4,Pseudomonas_syringae_pv._actinidiae_KACC_10594__South_Korea:4.68E-4):0.001651,((Pseudomonas_syringae_pv._actinidiae_MAFF_302145__Japan:2.35E-4,Pseudomonas_syringae_pv._actinidiae_MAFF_302091__Japan:2.32E-4,(Pseudomonas_syringae_pv._actinidiae_MAFF_302143__Japan:2.38E-4,Pseudomonas_syringae_pv._actinidiae_ICMP_9855__Japan:2.36E-4):4.68E-4):9.24E-4,('Pseudomonas syringae pv. actinidiae T10_04758 New Zealand':2.36E-4,'Pseudomonas syringae pv. actinidiae I.6.5.10.4-4  Italy':2.33E-4,'Pseudomonas syringae pv. actinidiae T10_04782 New Zealand':2.34E-4,'Pseudomonas syringae pv. actinidiae T10_05454 New Zealand':2.34E-4,'Pseudomonas syringae pv. actinidiae T10_06115 New Zealand':2.32E-4,'Pseudomonas syringae pv. actinidiae T11_0918 New Zealand':2.36E-4,Pseudomonas_syringae_pv._actinidiae_I.27.4.10.D1__Italy:2.35E-4):4.78E-4):9.31E-4):0.005762);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr48746]


END;