#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 08, 2021; 20:08 GMT TreeBASE (cc) 1994-2008 Study reference: Zhang Y., Zeng C., & Li D. 2012. Complex Evolution in Arundinarieae (Poaceae: Bambusoideae): Incongruence between plastid and nuclear GBSSI gene phylogenies. Molecular Phylogenetics and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S12340] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=178; TAXLABELS Acidosasa_chienouensis_A Acidosasa_chienouensis_B Acidosasa_chinensis_A Acidosasa_chinensis_B Acidosasa_notata Acidosasa_purpurea_A Acidosasa_purpurea_B Ampelocalamus_patellaris Ampelocalamus_scandens Arundinaria_appalachiana Arundinaria_gigantea Arundinaria_tecta Bambusa_ventricosa_A Bambusa_ventricosa_B Bashania_abietina Bashania_aristata_A Bashania_aristata_B Bashania_fangiana_A Bashania_fangiana_B Bashania_fargesii_A Bashania_fargesii_B Bashania_qiaojiaensis_A Bashania_qiaojiaensis_B Bashania_qingchengshanensis Bashania_spanostachya_A Bashania_spanostachya_B Bashania_yongdeensis_A Bashania_yongdeensis_B Bonia_amplexicaulis Bonia_levigata Brachystachyum_densiflorum_A Brachystachyum_densiflorum_B Chimonobambusa_macrophylla_A Chimonobambusa_macrophylla_B Chimonobambusa_sichuanensis_A Chimonobambusa_sichuanensis_B Chimonobambusa_szechuanensis_A Chimonobambusa_szechuanensis_B Chimonocalamus_cibarius Chimonocalamus_dumosus_A Chimonocalamus_dumosus_B Chimonocalamus_longiusculus_A Chimonocalamus_longiusculus_B Chimonocalamus_montanus Chimonocalamus_pallens Chimonocalamus_pallens_A Chimonocalamus_pallens_B Dendrocalamus_farinosus_A Dendrocalamus_farinosus_B Drepanostachyum_ampullare Drepanostachyum_hookerianum Fargesia_decurvata_A Fargesia_decurvata_B Fargesia_fungosa Fargesia_macclureana Fargesia_nitida_A Fargesia_nitida_B Fargesia_qinlingensis_A Fargesia_qinlingensis_B Ferrocalamus_strictus Gaoligongshania_megalothyrsa Gelidocalamus_rutilans_A Gelidocalamus_rutilans_B Gelidocalamus_sp1_A Gelidocalamus_sp1_B Gelidocalamus_sp2_A Gelidocalamus_sp2_B Gelidocalamus_tessellatus_A Gelidocalamus_tessellatus_B Himalayacalamus_falconeri_A Himalayacalamus_falconeri_B Indocalamus_barbatus Indocalamus_emeiensis Indocalamus_hirsutissimus Indocalamus_hirtivaginatus Indocalamus_jinpingensis Indocalamus_longiauritus_A Indocalamus_longiauritus_B Indocalamus_pseudosinicus Indocalamus_sinicus_Zeng_&_Zhang_06081 Indocalamus_sinicus_Zhang_08034 Indocalamus_tongchunensis Indocalamus_wilsonii_Zeng_&_S.D.Zhang_07119 Indocalamus_wilsonii_Zhang_07088 Indocalamus_wuxiensis_A Indocalamus_wuxiensis_B Indosasa_crassiflora Indosasa_gigantea_A Indosasa_gigantea_B Indosasa_shibataeoides_A Indosasa_shibataeoides_B Indosasa_sinica_A Indosasa_sinica_B Neomicrocalamus_prainii_A Neomicrocalamus_prainii_B Oligostachyum_oedogonatum Oligostachyum_scabriflorum_A Oligostachyum_scabriflorum_B Oligostachyum_shiuyingianum_A Oligostachyum_shiuyingianum_B Oligostachyum_sulcatum_A Oligostachyum_sulcatum_B Phyllostachys_edulis Phyllostachys_nidularia_A Phyllostachys_nidularia_B Phyllostachys_nigra_A Phyllostachys_nigra_B Pleioblastus_amarus_A Pleioblastus_amarus_B Pleioblastus_gramineus_A Pleioblastus_gramineus_B Pleioblastus_intermedius_A Pleioblastus_intermedius_B Pleioblastus_juxianensis_A Pleioblastus_juxianensis_B Pleioblastus_maculatus_A Pleioblastus_maculatus_B Pleioblastus_sanmingensis_A Pleioblastus_sanmingensis_B Pleioblastus_solidus_A Pleioblastus_solidus_B Pleioblastus_sp_A Pleioblastus_sp_B Pleioblastus_wuyishanensis Pleioblastus_yixingensis_A Pleioblastus_yixingensis_B Pseudosasa_acutivagina Pseudosasa_amabilis Pseudosasa_amabilis_var_convexa_A Pseudosasa_amabilis_var_convexa_B Pseudosasa_cantorii_A Pseudosasa_cantorii_B Pseudosasa_gracilis Pseudosasa_guanxianensis_A Pseudosasa_guanxianensis_B Pseudosasa_japonica_A Pseudosasa_japonica_B Pseudosasa_japonica_var_tsutsumiana_A Pseudosasa_japonica_var_tsutsumiana_B Pseudosasa_maculifera_A Pseudosasa_maculifera_B Pseudosasa_usawae_A Pseudosasa_usawae_B Sasa_guangxiensis Sasa_kurilensis Sasa_longiligulata Sasa_magnonoda Sasa_oshidensis_A Sasa_oshidensis_B Sasa_palmata_A Sasa_palmata_B Sasa_qingyuanensis_A Sasa_qingyuanensis_B Sasa_senanensis Sasa_sinica Sasa_tsuboiana Sasa_veitchii_A Sasa_veitchii_B Sasaella_ramosa_A Sasaella_ramosa_B Shibataea_lanceifolia Shibataea_nanpingensis Sinobambusa_intermedia_A Sinobambusa_intermedia_B Sinobambusa_tootsik_A Sinobambusa_tootsik_B Thamnocalamus_spathiflorus_A Thamnocalamus_spathiflorus_B Thamnocalamus_spathiflorus_var_crassinodus_G78_A Thamnocalamus_spathiflorus_var_crassinodus_G78_B Thamnocalamus_spathiflorus_var_crassinodus_G93_A Thamnocalamus_spathiflorus_var_crassinodus_G93_B Thamnocalamus_tessellatus Yushania_alpina Yushania_baishanzuensis Yushania_basihirsuta Yushania_brevipaniculata Yushania_yadongensis ; END; BEGIN TREES; TITLE GBSSI_RAxML_MLT; LINK TAXA = Taxa; TREE best = [&R] ((((Neomicrocalamus_prainii_A:0.0017191231967759986,Neomicrocalamus_prainii_B:8.567280250521008E-4):0.01407063228955512,(Bonia_amplexicaulis:0.0017033380378144467,Bonia_levigata:0.0016888511148441465):0.013982232224066216):0.008455782055280657,((Dendrocalamus_farinosus_A:0.0077241605563433445,Dendrocalamus_farinosus_B:0.010901235098704658):0.0030529340813142437,(Bambusa_ventricosa_A:0.0036514724817208115,Bambusa_ventricosa_B:0.007447190974354777):0.0031250316432394004):0.0020573984405033285):0.022165723599145683,((Fargesia_fungosa:0.00430015377084264,((Ampelocalamus_scandens:0.0035115648771888615,Ampelocalamus_patellaris:0.00446913919976882):0.006233877607509278,(Himalayacalamus_falconeri_B:0.004347765782672982,(Himalayacalamus_falconeri_A:0.002595610998071117,(Drepanostachyum_ampullare:0.006111753948506485,Drepanostachyum_hookerianum:0.0017315643156150344):8.423523977543202E-4):8.399653153109574E-4):0.008154171430412869):0.0013102359173054192):1.37521443062425E-6,(((Chimonobambusa_sichuanensis_A:0.0017279630547148823,Chimonobambusa_macrophylla_B:0.0034612439074228935):1.37521443062425E-6,(Chimonobambusa_szechuanensis_B:0.0024432449431179538,(Chimonobambusa_macrophylla_A:0.0050659737807727655,Chimonobambusa_szechuanensis_A:0.002767811287130497):0.002587225702783702):0.0010112426286167195):0.002584191230444401,(((Indocalamus_sinicus_Zhang_08034:1.37521443062425E-6,Indocalamus_sinicus_Zeng_&_Zhang_06081:1.37521443062425E-6):0.0025915099664681846,((Chimonocalamus_longiusculus_B:8.541666160210501E-4,(Chimonocalamus_longiusculus_A:1.37521443062425E-6,Chimonocalamus_pallens:0.0025725261660132165):0.001717170597956129):8.56944701291822E-4,((Chimonocalamus_dumosus_A:0.00171178193756186,Chimonocalamus_dumosus_B:1.37521443062425E-6):0.001714632456956944,(Chimonocalamus_pallens_A:0.0017164538366763501,(Chimonocalamus_pallens_B:0.0017145425979460357,(Chimonocalamus_cibarius:1.37521443062425E-6,Chimonocalamus_montanus:1.37521443062425E-6):8.594637652539957E-4):8.547006520726526E-4):8.559023051122408E-4):1.37521443062425E-6):0.003448392366596253):8.44272707312817E-4,((Indocalamus_wilsonii_Zeng_&_S.D.Zhang_07119:0.0025623167417272766,Indocalamus_wilsonii_Zhang_07088:8.540744201660678E-4):0.0017115909028076943,(((Indocalamus_tongchunensis:0.006904912391240255,(Indocalamus_pseudosinicus:0.009507966872959095,((Gelidocalamus_tessellatus_A:0.004082684067786402,Gelidocalamus_tessellatus_B:0.009906287543711301):0.001978804897116632,(Indocalamus_jinpingensis:0.004170449272486121,(Indocalamus_barbatus:0.007459380184308587,Ferrocalamus_strictus:0.005592792555341804):0.004649922351521158):0.002057976982417235):1.37521443062425E-6):0.001718241924857966):0.0034771489169539756,((Indocalamus_wuxiensis_A:0.001981289041897275,(Bashania_fargesii_B:8.607433005818043E-4,Bashania_aristata_B:8.534669970384872E-4):0.00578035340203103):8.574860472099729E-4,((Indocalamus_longiauritus_A:8.635131372902659E-4,(Chimonobambusa_sichuanensis_B:1.37521443062425E-6,Bashania_qingchengshanensis:8.734667133664213E-4):0.0035272296879900783):0.0026371020379696106,((Bashania_aristata_A:0.006044508508634035,(Pseudosasa_guanxianensis_A:0.002574121366956041,Indocalamus_wuxiensis_B:1.37521443062425E-6):0.002571754482525961):8.592631308113926E-4,((Gelidocalamus_sp2_B:0.0043038710362847885,(Gelidocalamus_sp1_A:8.574430125607718E-4,Gelidocalamus_sp1_B:0.0027713846300396953):0.003442720777978152):1.37521443062425E-6,((Indocalamus_hirsutissimus:0.0017203614412747371,Indocalamus_emeiensis:8.559764895566827E-4):0.0017210265806510625,((Pseudosasa_guanxianensis_B:0.0025783504623855618,Indocalamus_longiauritus_B:1.37521443062425E-6):0.006052080502032652,(Gelidocalamus_rutilans_B:8.539631338744361E-4,((Pseudosasa_usawae_A:8.565351223581388E-4,Pseudosasa_usawae_B:0.0017183307328691643):8.590780748300948E-4,(Indocalamus_hirtivaginatus:0.001717366270441858,(Gelidocalamus_sp2_A:1.37521443062425E-6,Gelidocalamus_rutilans_A:1.37521443062425E-6):1.37521443062425E-6):8.56246346513114E-4):0.0017290912459053042):0.0025803949929594167):1.37521443062425E-6):0.0017164950251663692):0.0025749922131657423):1.37521443062425E-6):0.0014488429566876513):0.001977625873555105):1.37521443062425E-6,((Pseudosasa_gracilis:0.005156830632961243,(Yushania_brevipaniculata:9.061973959919711E-4,(Yushania_basihirsuta:0.0036456742373744563,Yushania_baishanzuensis:0.0018127610669486664):8.899579232320956E-4):8.997117527000057E-4):1.37521443062425E-6,(((Fargesia_decurvata_B:0.006115120027005494,((Fargesia_macclureana:0.0027086979956577537,Yushania_yadongensis:0.0025739371712242905):1.37521443062425E-6,(Thamnocalamus_spathiflorus_B:0.0025751202336950557,(Thamnocalamus_spathiflorus_var_crassinodus_G78_B:0.0017066694143951112,Thamnocalamus_spathiflorus_var_crassinodus_G93_B:8.531258820347366E-4):0.00258338786370057):8.467534685843124E-4):1.37521443062425E-6):8.495089219012897E-4,(Bashania_spanostachya_B:0.0016762685517078663,((Bashania_yongdeensis_A:8.363286378742124E-4,Bashania_yongdeensis_B:1.37521443062425E-6):1.37521443062425E-6,((Bashania_abietina:0.001681424650767587,Bashania_spanostachya_A:0.0016748504081290723):8.332683513593184E-4,((Bashania_fangiana_A:8.365612652236213E-4,Bashania_fangiana_B:1.37521443062425E-6):0.0025153437982181784,(Bashania_qiaojiaensis_A:0.0042136729725439645,Bashania_qiaojiaensis_B:0.0033748084679761084):8.394790592294577E-4):8.335959081910168E-4):0.003359181521276674):0.0016848605958460915):0.003651582727875016):1.74833196745029E-6,((Sasa_guangxiensis:0.007157021161977431,(Sasa_longiligulata:0.0034322340641737216,Sasa_magnonoda:0.0025648870373088844):0.0026030318023355444):0.003414943737831138,(((Gaoligongshania_megalothyrsa:0.005384399874697132,Yushania_alpina:0.012201176423202615):0.002666810640769773,((Fargesia_qinlingensis_B:0.008643641490723282,Thamnocalamus_tessellatus:0.010503995921105331):7.882181404773607E-4,(Fargesia_qinlingensis_A:0.00257718444705787,(Fargesia_nitida_A:1.37521443062425E-6,Fargesia_nitida_B:0.0035502451185914353):0.0017745116132651079):0.0017079395982868594):1.37521443062425E-6):8.476767998517744E-4,((Phyllostachys_edulis:1.37521443062425E-6,Phyllostachys_nigra_B:1.37521443062425E-6):0.0017584328085212843,((Phyllostachys_nidularia_A:0.0026390626444151377,Phyllostachys_nidularia_B:0.006184010406644137):8.70178021059205E-4,((Brachystachyum_densiflorum_A:0.0026343648499019463,Phyllostachys_nigra_A:8.676099329315526E-4):0.0017482457579151656,(((Shibataea_lanceifolia:1.37521443062425E-6,Shibataea_nanpingensis:0.0017792452487199188):0.003661306216810209,(Arundinaria_gigantea:0.005622680198592784,(Arundinaria_appalachiana:0.0021293510011340926,Arundinaria_tecta:0.005610330313330405):8.591161279792531E-4):0.0021519694894473395):1.37521443062425E-6,(((Sasa_palmata_B:1.37521443062425E-6,(Sasa_kurilensis:1.37521443062425E-6,Sasa_senanensis:1.37521443062425E-6):1.37521443062425E-6):0.006044190409545884,(Sasa_oshidensis_B:1.37521443062425E-6,(Sasa_veitchii_B:1.37521443062425E-6,(Sasa_veitchii_A:0.002547044959277215,(Sasaella_ramosa_B:0.0016940463046667825,(Pleioblastus_sp_B:1.37521443062425E-6,Sasa_palmata_A:1.37521443062425E-6):0.0034045683427817944):1.37521443062425E-6):8.413053512280249E-4):0.001684852094019997):0.00337849276521264):0.0033864986169867446,(((Pseudosasa_japonica_B:1.37521443062425E-6,Pseudosasa_japonica_var_tsutsumiana_B:1.37521443062425E-6):8.607566715496278E-4,(Sasa_oshidensis_A:0.0043013488417657925,(Sasa_qingyuanensis_B:0.0017130892943632698,(Sasa_sinica:1.37521443062425E-6,Sasa_qingyuanensis_A:1.37521443062425E-6):0.003994636727143232):0.002002071773493656):8.498890405709737E-4):0.0017010603178586627,((Sasaella_ramosa_A:1.37521443062425E-6,Sasa_tsuboiana:1.37521443062425E-6):0.006888012667349553,(Pleioblastus_sp_A:0.004289205240495389,((Oligostachyum_oedogonatum:0.004231836381017754,(Indosasa_shibataeoides_A:0.0017070788053111293,Indosasa_shibataeoides_B:0.005144315424849434):0.001712703712137642):1.37521443062425E-6,((((Oligostachyum_sulcatum_B:8.591831950474484E-4,Oligostachyum_scabriflorum_A:0.006038277335308165):8.476523455828723E-4,(Pleioblastus_sanmingensis_B:0.0017075706530322397,(Oligostachyum_shiuyingianum_B:0.0054642677373993144,Oligostachyum_scabriflorum_B:0.002565005152561523):1.37521443062425E-6):1.37521443062425E-6):1.37521443062425E-6,((Indosasa_sinica_A:0.0017082540629030066,(Sinobambusa_tootsik_B:0.0017071815596008066,Indosasa_crassiflora:0.006010913578001568):1.37521443062425E-6):0.0017067479284102076,((Indosasa_sinica_B:0.0043641757680391675,Acidosasa_purpurea_A:8.536115166805884E-4):8.531537440004567E-4,(Acidosasa_purpurea_B:8.503152892627608E-4,(Acidosasa_chienouensis_B:1.37521443062425E-6,Indosasa_gigantea_B:1.37521443062425E-6):0.0017100211429762844):0.0017141637934148194):1.37521443062425E-6):8.517745873806148E-4):1.37521443062425E-6,(Pleioblastus_gramineus_A:8.51711792859321E-4,((Pleioblastus_wuyishanensis:0.0017045313473618318,((Pseudosasa_cantorii_A:0.006044741846376494,Pleioblastus_gramineus_B:0.0017205621281850766):8.568351889426274E-4,((Acidosasa_chinensis_A:8.518798946637419E-4,Acidosasa_chinensis_B:0.001714147976800512):0.002562942061329403,(Pleioblastus_intermedius_B:0.001714161444850015,((Pseudosasa_maculifera_A:0.0017189470621476145,Pseudosasa_maculifera_B:1.37521443062425E-6):0.002559507947643389,((Fargesia_decurvata_A:0.0025665602957448755,Thamnocalamus_spathiflorus_var_crassinodus_G93_A:0.0017096084131395348):1.37521443062425E-6,(Pleioblastus_yixingensis_B:1.37521443062425E-6,(Thamnocalamus_spathiflorus_var_crassinodus_G78_A:1.37521443062425E-6,(Bashania_fargesii_A:1.37521443062425E-6,(Pleioblastus_intermedius_A:1.37521443062425E-6,Thamnocalamus_spathiflorus_A:1.37521443062425E-6):1.37521443062425E-6):1.37521443062425E-6):1.37521443062425E-6):1.37521443062425E-6):8.568153028856466E-4):0.0017115677753913095):8.519582085467415E-4):1.37521443062425E-6):1.37521443062425E-6):8.485337377707131E-4,(((Pseudosasa_japonica_A:1.37521443062425E-6,Pseudosasa_japonica_var_tsutsumiana_A:1.37521443062425E-6):0.005182844606986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[! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr52786] END;