#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 08, 2021; 19:14 GMT TreeBASE (cc) 1994-2008 Study reference: Zhang Y., Zeng C., & Li D. 2012. Complex Evolution in Arundinarieae (Poaceae: Bambusoideae): Incongruence between plastid and nuclear GBSSI gene phylogenies. Molecular Phylogenetics and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S12340] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=116; TAXLABELS Acidosasa_chienouensis Acidosasa_chinensis Acidosasa_notata Acidosasa_purpurea Ampelocalamus_actinotrichus Ampelocalamus_patellaris Ampelocalamus_scandens Arundinaria_appalachiana Arundinaria_gigantea Arundinaria_tecta Bambusa_ventricosa Bashania_abietina Bashania_aristata Bashania_fangiana Bashania_fargesii Bashania_qiaojiaensis Bashania_qingchengshanensis Bashania_spanostachya Bashania_yongdeensis Bonia_amplexicaulis Bonia_levigata Brachystachyum_densiflorum Chimonobambusa_macrophylla Chimonobambusa_sichuanensis Chimonobambusa_szechuanensis Chimonocalamus_cibarius Chimonocalamus_dumosus Chimonocalamus_fimbriatus Chimonocalamus_longiusculus Chimonocalamus_montanus Chimonocalamus_pallens Dendrocalamus_farinosus Drepanostachyum_ampullare Drepanostachyum_hookerianum Fargesia_decurvata Fargesia_fungosa Fargesia_macclureana Fargesia_nitida Fargesia_qinlingensis Ferrocalamus_strictus Gaoligongshania_megalothyrsa Gelidocalamus_rutilans Gelidocalamus_sp1 Gelidocalamus_sp2 Gelidocalamus_tessellatus Himalayacalamus_falconeri Indocalamus_barbatus Indocalamus_emeiensis Indocalamus_hirsutissimus Indocalamus_hirtivaginatus Indocalamus_jinpingensis Indocalamus_longiauritus Indocalamus_pseudosinicus Indocalamus_sinicus_Zeng_&_Zhang_06081 Indocalamus_sinicus_Zhang_08034 Indocalamus_tongchunensis Indocalamus_wilsonii_Zeng_&_S.D._Zhang_07119 Indocalamus_wilsonii_Zhang_07088b Indocalamus_wuxiensis Indosasa_crassiflora Indosasa_gigantea Indosasa_shibataeoides Indosasa_sinica Neomicrocalamus_prainii Oligostachyum_oedogonatum Oligostachyum_scabriflorum Oligostachyum_shiuyingianum Oligostachyum_sulcatum Phyllostachys_edulis Phyllostachys_nidularia Phyllostachys_nigra Pleioblastus_amarus Pleioblastus_gramineus Pleioblastus_intermedius Pleioblastus_juxianensis Pleioblastus_maculatus Pleioblastus_sanmingensis Pleioblastus_solidus Pleioblastus_sp Pleioblastus_wuyishanensis Pleioblastus_yixingensis Pseudosasa_acutivagina Pseudosasa_amabilis Pseudosasa_amabilis_var_convexa Pseudosasa_cantorii Pseudosasa_gracilis Pseudosasa_guanxianensis Pseudosasa_japonica Pseudosasa_japonica_var_tsutsumiana Pseudosasa_maculifera Pseudosasa_usawae Sasa_guangxiensis Sasa_kurilensis Sasa_longiligulata Sasa_magnonoda Sasa_oshidensis Sasa_palmata Sasa_qingyuanensis Sasa_senanensis Sasa_shimidzuana Sasa_sinica Sasa_tsuboiana Sasa_veitchii Shibataea_lanceifolia Shibataea_nanpingensis Sinobambusa_intermedia Sinobambusa_tootsik Thamnocalamus_spathiflorus Thamnocalamus_spathiflorus_var_crassinodus_G78 Thamnocalamus_spathiflorus_var_crassinodus_G93 Thamnocalamus_tessellatus Yushania_alpina Yushania_baishanzuensis Yushania_basihirsuta Yushania_brevipaniculata Yushania_yadongensis ; END; BEGIN TREES; TITLE 8_plastid_RAxML_bipartitions; LINK TAXA = Taxa; TREE best = [&R] (((Bonia_levigata:0.00133785816480774,Bonia_amplexicaulis:0.0010896867245220449)100:0.0018848166795199695,(Neomicrocalamus_prainii:0.003577550167513804,(Dendrocalamus_farinosus:0.0012102322903964709,Bambusa_ventricosa:0.0013587882006135853)92:3.517569390545375E-4)88:7.478785349331538E-4)100:0.008927307169777073,((Thamnocalamus_tessellatus:0.0021461838245293,(Indocalamus_wilsonii_Zeng_&_S.D._Zhang_07119:3.731716181926732E-4,Indocalamus_wilsonii_Zhang_07088b:7.520522011742449E-4)100:0.0027708877274787666)65:2.3890336889856133E-4,(((Shibataea_lanceifolia:5.2834933681955E-7,Shibataea_nanpingensis:5.2834933681955E-7)100:0.0023214524567179693,((Indocalamus_jinpingensis:0.002877790014998892,(Pseudosasa_gracilis:7.846392879851379E-4,(Sasa_guangxiensis:2.5121533396081863E-4,(Sasa_longiligulata:6.285748879090114E-4,Sasa_magnonoda:3.791294475733077E-4)69:1.2487035988399624E-4)100:0.0012646720207717304)97:6.507544296439054E-4)60:1.230263678748873E-4,(Gelidocalamus_tessellatus:0.001121247035765166,(Ferrocalamus_strictus:0.001996399104818731,(Gelidocalamus_sp1:2.481812849128577E-4,(Indocalamus_tongchunensis:0.00124371799992023,(Indocalamus_pseudosinicus:6.428518486696023E-4,Indocalamus_barbatus:4.973540142990563E-4)75:1.2772515320926087E-4)21:5.2834933681955E-7)100:0.0012800367972001737)21:5.2834933681955E-7)30:1.276226901641555E-4)24:1.3485864986028786E-4)95:7.678009353433756E-4,((((Arundinaria_gigantea:8.754577888519265E-4,(Arundinaria_appalachiana:1.2727306259180835E-4,Arundinaria_tecta:1.2513092098933234E-4)100:0.0011994876675432374)91:2.6374527581747353E-4,(Sasa_palmata:5.2834933681955E-7,(Sasa_oshidensis:4.992824829309998E-4,(Sasa_kurilensis:2.496332879017931E-4,((Sasa_senanensis:4.99989765922938E-4,Sasa_shimidzuana:4.999125749482733E-4)78:5.2834933681955E-7,(Sasa_veitchii:5.2834933681955E-7,Sasa_tsuboiana:1.251389162302233E-4)93:5.2834933681955E-7)35:5.2834933681955E-7)55:5.2834933681955E-7)60:1.2430811843015571E-4)97:7.482423777846323E-4)46:5.2834933681955E-7,((Pleioblastus_sp:6.282028955580745E-4,(Pleioblastus_gramineus:5.019950056965771E-4,(Pseudosasa_japonica:5.2834933681955E-7,Pseudosasa_japonica_var_tsutsumiana:5.2834933681955E-7)91:2.5045004874335374E-4)100:7.544234965623806E-4)100:6.269497813758958E-4,(Indosasa_shibataeoides:2.498524163710585E-4,(Sinobambusa_tootsik:2.492144867593795E-4,(Sinobambusa_intermedia:5.2834933681955E-7,(Pseudosasa_cantorii:1.2466101688322304E-4,(Oligostachyum_scabriflorum:5.2834933681955E-7,(Acidosasa_purpurea:5.2834933681955E-7,(Oligostachyum_sulcatum:5.2834933681955E-7,(Indosasa_crassiflora:1.2473122169103393E-4,(Acidosasa_chinensis:5.2834933681955E-7,(Pseudosasa_amabilis:5.2834933681955E-7,(Oligostachyum_shiuyingianum:5.2834933681955E-7,((Indosasa_sinica:1.2477453028177573E-4,Pleioblastus_maculatus:3.8905075287943793E-4)30:5.2834933681955E-7,(Acidosasa_chienouensis:5.2834933681955E-7,Indosasa_gigantea:5.2834933681955E-7)72:1.2479875966421092E-4)37:5.2834933681955E-7)44:5.2834933681955E-7)19:5.2834933681955E-7)24:5.2834933681955E-7)10:5.2834933681955E-7)5:5.2834933681955E-7)19:5.2834933681955E-7)47:5.2834933681955E-7)53:5.2834933681955E-7)41:5.2834933681955E-7)63:1.2867019594501876E-4)99:7.744090768011047E-4)98:5.150215273597148E-4)96:7.579672628590731E-4,(((Thamnocalamus_spathiflorus:0.0016385261297192147,(Thamnocalamus_spathiflorus_var_crassinodus_G93:2.503935727626994E-4,Thamnocalamus_spathiflorus_var_crassinodus_G78:5.2834933681955E-7)99:6.270093632225558E-4)99:0.0015089006070402352,(Gaoligongshania_megalothyrsa:0.004190079485800886,(Yushania_alpina:0.0030778200149135272,(Ampelocalamus_actinotrichus:0.002128538576991069,((Chimonocalamus_longiusculus:5.040857845938703E-4,Chimonocalamus_dumosus:2.5277105304463883E-4)98:3.802874199499777E-4,(Chimonocalamus_montanus:5.2834933681955E-7,Chimonocalamus_cibarius:1.257764954177989E-4)100:7.544079291947565E-4)80:1.442474411044586E-4)100:0.0012470137591686305)48:1.3800339545501944E-4)43:2.5846695923586164E-4)11:5.2834933681955E-7,((Indocalamus_sinicus_Zeng_&_Zhang_06081:2.487880134732135E-4,Indocalamus_sinicus_Zhang_08034:4.986303459631103E-4)100:0.002141073279980126,(Ampelocalamus_scandens:0.0012541731439688999,(Yushania_baishanzuensis:2.49648912579394E-4,((Pseudosasa_acutivagina:5.2834933681955E-7,((Pseudosasa_amabilis_var_convexa:5.2834933681955E-7,Pseudosasa_maculifera:2.4943692186062653E-4)86:2.492546336502624E-4,(Phyllostachys_edulis:5.2834933681955E-7,((Oligostachyum_oedogonatum:5.2834933681955E-7,Pleioblastus_sanmingensis:5.2834933681955E-7)63:1.248272769185269E-4,(((Phyllostachys_nigra:1.249829589699696E-4,Pseudosasa_usawae:3.749418346092891E-4)21:5.2834933681955E-7,(Acidosasa_notata:1.250209300347448E-4,(Pleioblastus_wuyishanensis:5.2834933681955E-7,Pleioblastus_solidus:5.2834933681955E-7)38:5.2834933681955E-7)65:1.2495509302926617E-4)10:5.2834933681955E-7,(Pleioblastus_intermedius:5.2834933681955E-7,((Pleioblastus_juxianensis:5.2834933681955E-7,Pleioblastus_yixingensis:5.2834933681955E-7)58:5.2834933681955E-7,(Pleioblastus_amarus:5.2834933681955E-7,(Brachystachyum_densiflorum:5.2834933681955E-7,(Sasa_qingyuanensis:1.250835051195375E-4,Sasa_sinica:5.2834933681955E-7)43:5.2834933681955E-7)10:5.2834933681955E-7)28:5.2834933681955E-7)24:5.2834933681955E-7)10:5.2834933681955E-7)25:5.2834933681955E-7)20:5.2834933681955E-7)44:5.2834933681955E-7)56:1.2433878534468863E-4)51:1.243626250004769E-4,((Yushania_brevipaniculata:2.507858858875726E-4,(Himalayacalamus_falconeri:0.00176532004723521,(Drepanostachyum_ampullare:0.0011290327035785447,Drepanostachyum_hookerianum:3.752819157300722E-4)97:2.4776917974606195E-4)98:7.526942139141175E-4)48:1.243482425570522E-4,((Bashania_aristata:1.2496472392626895E-4,Indocalamus_emeiensis:8.774177437591831E-4)63:1.2511902348868824E-4,((Bashania_fangiana:1.2509645561859534E-4,Bashania_abietina:1.2503261486580532E-4)60:1.2486298052055963E-4,((Indocalamus_longiauritus:1.2499237847736152E-4,(Indocalamus_hirsutissimus:1.250621939109251E-4,(Pseudosasa_guanxianensis:5.2834933681955E-7,Bashania_qingchengshanensis:5.2834933681955E-7)100:7.52508308983508E-4)30:5.2834933681955E-7)54:1.2476463101905464E-4,(Chimonobambusa_sichuanensis:1.2521980338538112E-4,(Fargesia_fungosa:5.2834933681955E-7,((Chimonocalamus_fimbriatus:2.500960974157339E-4,Chimonobambusa_macrophylla:5.028848654011534E-4)43:1.2493928156202556E-4,((Ampelocalamus_patellaris:6.001049063112122E-4,(Bashania_yongdeensis:3.75745756355382E-4,(Fargesia_macclureana:6.171562914946855E-4,Bashania_spanostachya:1.0494298887168309E-4)52:2.756420164483846E-5)45:5.2834933681955E-7)29:5.2834933681955E-7,((Indocalamus_hirtivaginatus:5.2834933681955E-7,(Gelidocalamus_rutilans:5.2834933681955E-7,Gelidocalamus_sp2:1.2505443310340463E-4)71:1.2498988377153292E-4)65:1.2493497866557669E-4,(Phyllostachys_nidularia:3.75215171487171E-4,(Bashania_qiaojiaensis:2.5021781712927484E-4,(Chimonobambusa_szechuanensis:3.7528426606875875E-4,(Yushania_basihirsuta:2.501292062415418E-4,(Chimonocalamus_pallens:1.2506127180178617E-4,(Indocalamus_wuxiensis:3.753192422414687E-4,(Yushania_yadongensis:6.267250479071371E-4,(Fargesia_qinlingensis:8.746994218891257E-4,(Fargesia_decurvata:3.7608372709423544E-4,(Bashania_fargesii:2.499991980172206E-4,Fargesia_nitida:5.034617576676332E-4)42:5.2834933681955E-7)68:5.2834933681955E-7)57:2.581154404517974E-4)21:5.2834933681955E-7)4:5.2834933681955E-7)2:5.2834933681955E-7)0:5.2834933681955E-7)0:5.2834933681955E-7)0:5.2834933681955E-7)0:5.2834933681955E-7)0:5.2834933681955E-7)0:5.2834933681955E-7)0:5.2834933681955E-7)0:5.2834933681955E-7)0:5.2834933681955E-7)0:5.2834933681955E-7)1:5.2834933681955E-7)3:5.2834933681955E-7)4:5.2834933681955E-7)8:5.2834933681955E-7)41:1.275886038805709E-4)45:1.281777836974616E-4)35:1.2674307662168305E-4)26:1.2670340680489206E-4)6:5.2834933681955E-7)27:1.9867753159487402E-4)100:0.008927307169777073); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr52789] END;