#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 20:05 GMT TreeBASE (cc) 1994-2008 Study reference: Alexander P., Windham M., Beck J., Al-shehbaz I.A., Allphin L., & Bailey C.D. 2012. Molecular phylogenetics and taxonomy of the genus Boechera and related genera (Brassicaceae: Boechereae). Systematic Botany, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S12814] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=98; TAXLABELS Anelsonia_eurycarpa_083 Anelsonia_eurycarpa_098 Boechera_arcuata_354a Boechera_breweri_subsp._breweri_350a Boechera_canadensis_288 Boechera_canadensis_298 Boechera_cobrensis_120 Boechera_collinsii_009a Boechera_collinsii_359a Boechera_constancei_353a Boechera_crandallii_003a Boechera_cusickii_B103_A1 Boechera_cusickii_B103_A2 Boechera_cusickii_B103_A9 Boechera_cusickii_B103_AC1 Boechera_cusickii_B103_AC2 Boechera_davidsonii_086 Boechera_evadens_306a Boechera_fendleri_226b Boechera_fendleri_229a Boechera_fernaldiana_subsp._fernaldiana_007a Boechera_fernaldiana_subsp._vivariensis_028 Boechera_formosa_041 Boechera_gracilipes_174 Boechera_gracilipes_347a Boechera_howellii_312a Boechera_koehleri_351a Boechera_laevigata_095 Boechera_laevigata_284 Boechera_lignifera_213 Boechera_lincolnensis_142 Boechera_lyallii_314a 'Boechera lyallii B-242' Boechera_missouriensis_245 Boechera_missouriensis_283a Boechera_nevadensis_013a Boechera_oxylobula_004 Boechera_oxylobula_005 Boechera_pallidifolia_069 Boechera_pallidifolia_331a 'Boechera pallidifolia B-335' Boechera_pendulina_015 Boechera_pendulina_168 Boechera_pendulocarpa_118a Boechera_pendulocarpa_342a Boechera_perennans_016 Boechera_perennans_133 Boechera_platysperma_017a_A1 Boechera_platysperma_017a_A2 Boechera_platysperma_017a_A4 Boechera_platysperma_017a_A5 Boechera_platysperma_017a_A7 Boechera_platysperma_017a_AC1 Boechera_polyantha_360a Boechera_puberula_018a Boechera_puberula_167 Boechera_pulchra_144 Boechera_repanda_308b Boechera_repanda_357a Boechera_retrofracta_170 Boechera_rollei_311a Boechera_serotina_094 Boechera_shockleyi_022a Boechera_sparsiflora_002a Boechera_sparsiflora_023a_A1 Boechera_sparsiflora_023a_A11 Boechera_sparsiflora_023a_A2 Boechera_sparsiflora_023a_A3 Boechera_sparsiflora_023a_A4 Boechera_sparsiflora_023a_A5 Boechera_sparsiflora_023a_A8 Boechera_sparsiflora_023a_A9 Boechera_spatifolia_124a Boechera_spatifolia_322a Boechera_stricta_025a Boechera_subpinnatifida_148 Boechera_suffrutescens_027 Boechera_texana_150d Boechera_williamsii_367a Boechera_yorkii_192 Crucihimalaya_wallichii_242 Cusickiella_douglasii_243 Cusickiella_douglasii_370 Halimolobos_jaegeri_244 Nevada_holmgrenii_084 Phoenicaulis_cheiranthoides_085_A1 Phoenicaulis_cheiranthoides_085_A2 Phoenicaulis_cheiranthoides_085_A3 Phoenicaulis_cheiranthoides_085_A4 Phoenicaulis_cheiranthoides_085_A5 Phoenicaulis_cheiranthoides_085_A6 Phoenicaulis_cheiranthoides_085_A7 Phoenicaulis_cheiranthoides_085_A9 Phoenicaulis_cheiranthoides_089 Polyctenium_fremontii_087 Polyctenium_fremontii_247 Sandbergia_whitedii_248 Transberingia_bursifolia_249 ; END; BEGIN TREES; TITLE Boechera_adh; LINK TAXA = Taxa; TREE MLT_RAxML = [&R] ((Crucihimalaya_wallichii_242:0.03302388188343809,Transberingia_bursifolia_249:0.012973828282484372):0.004758618612413087,(Halimolobos_jaegeri_244:0.017181993912261065,((Anelsonia_eurycarpa_083:1.34810771504371E-6,Anelsonia_eurycarpa_098:1.34810771504371E-6):0.010640523539919369,((((Boechera_laevigata_284:0.015861024910086407,Boechera_serotina_094:0.010360018658686933):0.006567676426052081,(Boechera_laevigata_095:0.0035309058975322412,(Boechera_missouriensis_245:0.0017740078218039758,Boechera_missouriensis_283a:1.34810771504371E-6):0.0035369335135076595):0.005099047272663161):0.010193369445776122,((Boechera_canadensis_288:1.34810771504371E-6,Boechera_canadensis_298:0.002132099771699703):0.006505990674270652,(Phoenicaulis_cheiranthoides_085_A3:0.005434794545586559,(Phoenicaulis_cheiranthoides_085_A4:1.34810771504371E-6,(Phoenicaulis_cheiranthoides_085_A7:0.001795795083551136,Phoenicaulis_cheiranthoides_085_A6:0.0017938126090963165):1.34810771504371E-6):1.34810771504371E-6):0.005369693458277919):1.34810771504371E-6):0.005115125875824195,(((Polyctenium_fremontii_087:1.34810771504371E-6,Polyctenium_fremontii_247:1.34810771504371E-6):0.00662303584282885,((Boechera_sparsiflora_023a_A1:0.013410446707159393,((Boechera_sparsiflora_002a:0.005223237760200175,Boechera_sparsiflora_023a_A5:0.004253963434092451):1.34810771504371E-6,(Boechera_sparsiflora_023a_A9:1.34810771504371E-6,Boechera_sparsiflora_023a_A3:1.34810771504371E-6):0.005536719361707841):0.003509493921800322):0.003609216944765186,((Boechera_platysperma_017a_A1:0.0012847125528257575,Boechera_platysperma_017a_A4:0.004718742136988785):0.014525757266516354,(Boechera_cusickii_B103_A9:0.007480690857853361,(Boechera_cusickii_B103_A1:0.0018431473168354032,(Boechera_cusickii_B103_AC1:1.34810771504371E-6,Boechera_cusickii_B103_AC2:0.0018548172576633051):1.34810771504371E-6):0.005831380348329421):0.017956461011315573):0.004806966977310905):0.0017009348286493341):1.34810771504371E-6,((Boechera_repanda_308b:0.0017396650353092415,Boechera_repanda_357a:0.001653288435960514):0.018537166920752215,(Nevada_holmgrenii_084:0.0034511991243298,((Cusickiella_douglasii_243:0.0020241305856007765,Cusickiella_douglasii_370:0.0018237418869506824):0.012433046746980753,((Sandbergia_whitedii_248:1.34810771504371E-6,(Phoenicaulis_cheiranthoides_085_A9:0.003679022872931391,(Phoenicaulis_cheiranthoides_089:1.34810771504371E-6,(Phoenicaulis_cheiranthoides_085_A1:0.0018393359168467594,(Phoenicaulis_cheiranthoides_085_A2:0.0018405953611607812,Phoenicaulis_cheiranthoides_085_A5:1.34810771504371E-6):1.34810771504371E-6):0.003688269842433991):1.34810771504371E-6):0.009357163851196778):1.34810771504371E-6,(Boechera_howellii_312a:0.003492671231640316,(Boechera_retrofracta_170:0.001736563610621172,(Boechera_fernaldiana_subsp._fernaldiana_007a:1.34810771504371E-6,(Boechera_evadens_306a:1.34810771504371E-6,((Boechera_davidsonii_086:0.01370598440460219,(Boechera_cobrensis_120:1.34810771504371E-6,Boechera_nevadensis_013a:1.34810771504371E-6):1.34810771504371E-6):0.0034937998046791307,((Boechera_polyantha_360a:0.0019322385392608215,((Boechera_sparsiflora_023a_A4:0.0019154110358493557,Boechera_sparsiflora_023a_A11:0.0019215955955950773):0.011673914712740584,(Boechera_crandallii_003a:0.0023044759146137062,(Boechera_subpinnatifida_148:0.0017985921799362266,(Boechera_puberula_018a:1.34810771504371E-6,(Boechera_constancei_353a:1.34810771504371E-6,Boechera_puberula_167:1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.0054162732844357415):1.34810771504371E-6,(Boechera_pendulocarpa_118a:0.004654497459442149,(('Boechera pallidifolia B-335':1.34810771504371E-6,(Boechera_lignifera_213:1.34810771504371E-6,(Boechera_pallidifolia_331a:1.34810771504371E-6,Boechera_pallidifolia_069:1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.005226201019569638,(Boechera_pendulocarpa_342a:0.0017522352233476605,('Boechera lyallii B-242':0.003996835460861527,(Boechera_stricta_025a:0.00461940649346038,(Boechera_rollei_311a:0.0017329837924480067,(Boechera_arcuata_354a:0.0034779666370241408,((Boechera_collinsii_009a:1.34810771504371E-6,Boechera_collinsii_359a:1.34810771504371E-6):0.0017347306064766017,(Boechera_suffrutescens_027:0.0052409474584439375,(Boechera_lyallii_314a:0.0017371104990517373,(((Boechera_platysperma_017a_A7:0.0018381377836956389,(Boechera_platysperma_017a_A5:0.003684895550338564,Boechera_platysperma_017a_AC1:1.34810771504371E-6):1.34810771504371E-6):0.007423618407630382,(Boechera_williamsii_367a:1.34810771504371E-6,(Boechera_platysperma_017a_A2:0.021313089418479158,Boechera_cusickii_B103_A2:0.005794609732931714):0.0038386458963238453):0.003853966109540456):1.34810771504371E-6,(Boechera_shockleyi_022a:0.0017402884742570525,((Boechera_sparsiflora_023a_A8:0.0019003739077360223,(Boechera_sparsiflora_023a_A2:1.34810771504371E-6,(Boechera_breweri_subsp._breweri_350a:1.34810771504371E-6,(Boechera_lincolnensis_142:1.34810771504371E-6,Boechera_pulchra_144:1.34810771504371E-6):0.008782710567858032):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6,(((Boechera_fernaldiana_subsp._vivariensis_028:0.008067896369156006,Boechera_koehleri_351a:0.0017355694328017584):1.34810771504371E-6,(Boechera_yorkii_192:0.0017401134810586033,Boechera_formosa_041:1.34810771504371E-6):0.0017401826356307029):1.34810771504371E-6,((Boechera_oxylobula_004:1.34810771504371E-6,Boechera_oxylobula_005:1.34810771504371E-6):0.003485356130637357,(Boechera_spatifolia_124a:1.34810771504371E-6,(Boechera_texana_150d:1.34810771504371E-6,(Boechera_spatifolia_322a:1.34810771504371E-6,((Boechera_pendulina_168:0.005223783074575515,(Boechera_fendleri_226b:1.34810771504371E-6,Boechera_fendleri_229a:0.0017282182611026112):0.0017302123716707537):1.34810771504371E-6,((Boechera_perennans_016:1.34810771504371E-6,Boechera_perennans_133:1.34810771504371E-6):0.0017277076244973373,(Boechera_gracilipes_174:1.34810771504371E-6,(Boechera_pendulina_015:1.34810771504371E-6,Boechera_gracilipes_347a:1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.0017328598121290931):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.005233363380903153):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.0017335409146619141):1.34810771504371E-6):1.34810771504371E-6):0.0017975566790893822):0.0018037766729772887):1.34810771504371E-6):0.006058121360563479):0.0030029017983003456):1.34810771504371E-6):1.34810771504371E-6):0.0027256721151396337):0.0026943152143997172):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.005502377796439835):0.005509113950130715):0.002286081025934884):1.34810771504371E-6):0.001782841800572223):0.00507032042131838):1.34810771504371E-6):0.007154192935022931):0.004758618612413087); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr53317] END;