#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 18, 2025; 22:06 GMT

TreeBASE (cc) 1994-2008

Study reference:
Rothfels C., Windham M.D., & Pryer K. 2013. A plastid phylogeny of the cosmopolitan
fern family Cystopteridaceae (Polypodiopsida). Systematic Botany, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S13449]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=61;
        TAXLABELS
            Acystopteris_japonica_7978
            Acystopteris_taiwaniana_4870
            Acystopteris_taiwaniana_6137
            Acystopteris_tenuisecta_4831
            Athyrium_otophorum_
            Blechnum_schomburgkii_
            Cystopteris_alpina_7920
            Cystopteris_bulbifera_5836
            Cystopteris_diaphana_6386
            Cystopteris_douglasii_6206
            Cystopteris_fragilis_5316
            Cystopteris_fragilis_5622
            Cystopteris_fragilis_5845
            Cystopteris_fragilis_5851
            Cystopteris_fragilis_5950
            Cystopteris_fragilis_6380
            Cystopteris_fragilis_6513
            Cystopteris_fragilis_6560
            Cystopteris_fragilis_7103
            Cystopteris_fragilis_brittonii_5847
            Cystopteris_membranifolia_6732
            Cystopteris_millefolia_6761
            Cystopteris_montana_5839
            Cystopteris_montana_7072
            Cystopteris_moupinensis_4861
            Cystopteris_moupinensis_7074
            Cystopteris_pellucida_6060
            Cystopteris_protrusa_5838
            Cystopteris_protrusa_5841
            Cystopteris_protrusa_6362
            Cystopteris_reevesiana_3126
            Cystopteris_reevesiana_5844
            Cystopteris_reevesiana_6342
            Cystopteris_sandwichensis_6208
            Cystopteris_sudetica_7980
            Cystopteris_tasmanica_6379
            Cystopteris_tennesseensis_4513
            Cystopteris_tenuis_5833
            Cystopteris_tenuis_6387
            Cystopteris_utahensis_5832
            Cystopteris_utahensis_5834
            Deparia_lancea_
            Diplaziopsis_javanica_
            Gymnocarpium_appalachianum_7800
            Gymnocarpium_disjunctum_4710
            Gymnocarpium_dryopteris_4601
            Gymnocarpium_dryopteris_5837
            Gymnocarpium_dryopteris_7059
            Gymnocarpium_dryopteris_aokigaharaense_7984
            Gymnocarpium_dryopteris_dryopteris_7981
            Gymnocarpium_jessoense_6059
            Gymnocarpium_jessoense_parvulum_8053
            Gymnocarpium_oyamense_6399
            Gymnocarpium_remotepinnatum_3066
            Gymnocarpium_remotepinnatum_4862
            Gymnocarpium_robertianum_7945
            Hemidictyum_marginatum_
            Onocleopsis_hintonii_
            Pseudocystopteris_atkinsonii_
            Pseudophegopteris_cruciata_
            Woodsia_obtusa_
            ;
END;

BEGIN TREES;
      TITLE Cystopteridaceae_rbcL_Bootstrap_MLT_Garli;
      LINK TAXA = Taxa;
      TREE bootrep12 = [&R] (Acystopteris_tenuisecta_4831:7.7758E-4,(((((((Cystopteris_protrusa_6362:1.0E-8,Cystopteris_protrusa_5841:1.0E-8,Cystopteris_protrusa_5838:0.00234145):0.00482167,(Cystopteris_diaphana_6386:1.0E-8,Cystopteris_tenuis_6387:0.00155371,Cystopteris_alpina_7920:1.0E-8,((Cystopteris_fragilis_6513:0.00421327,Cystopteris_membranifolia_6732:0.00421616):0.00126615,(Cystopteris_tenuis_5833:1.0E-8,Cystopteris_millefolia_6761:1.0E-8,Cystopteris_fragilis_6380:1.0E-8,Cystopteris_fragilis_7103:1.0E-8,Cystopteris_fragilis_5316:1.0E-8,Cystopteris_fragilis_5851:1.0E-8,Cystopteris_reevesiana_6342:1.0E-8,Cystopteris_reevesiana_3126:1.0E-8,Cystopteris_douglasii_6206:1.0E-8,Cystopteris_fragilis_5622:1.0E-8,Cystopteris_reevesiana_5844:1.0E-8,(Cystopteris_fragilis_5950:1.0E-8,Cystopteris_fragilis_brittonii_5847:1.0E-8):0.00155327,Cystopteris_fragilis_5845:1.0E-8,Cystopteris_sandwichensis_6208:1.0E-8,Cystopteris_tasmanica_6379:1.0E-8,Cystopteris_fragilis_6560:1.0E-8):0.00123585):0.00110478):0.00559342):0.00237577,(Cystopteris_utahensis_5834:1.0E-8,Cystopteris_utahensis_5832:1.0E-8,(Cystopteris_tennesseensis_4513:1.0E-8,Cystopteris_bulbifera_5836:1.0E-8):0.00234139):0.0031581):7.6692E-4,((Cystopteris_moupinensis_4861:1.0E-8,Cystopteris_moupinensis_7074:1.0E-8,Cystopteris_sudetica_7980:1.0E-8):0.00155976,Cystopteris_pellucida_6060:0.00499997):0.00566379):0.00238268,(Cystopteris_montana_5839:0.00188934,Cystopteris_montana_7072:9.0724E-4):0.00293603):0.00966975,((Diplaziopsis_javanica_:0.04069852,(Woodsia_obtusa_:0.04811493,(Hemidictyum_marginatum_:0.06250937,Pseudophegopteris_cruciata_:0.03336892):0.01037866,(((Athyrium_otophorum_:0.01258811,Pseudocystopteris_atkinsonii_:0.00472202):0.00731194,Deparia_lancea_:0.01875371):0.00526961,(Onocleopsis_hintonii_:0.01523079,Blechnum_schomburgkii_:0.04870097):0.00225061):0.00556445):0.00395343):0.00476762,((Gymnocarpium_oyamense_6399:0.00638915,((Gymnocarpium_appalachianum_7800:0.00188547,Gymnocarpium_jessoense_parvulum_8053:9.2882E-4):0.00193705,(Gymnocarpium_remotepinnatum_3066:1.0E-8,Gymnocarpium_remotepinnatum_4862:1.0E-8,Gymnocarpium_jessoense_6059:0.00103764):0.00157237):7.6565E-4,(Gymnocarpium_dryopteris_aokigaharaense_7984:1.0E-8,Gymnocarpium_dryopteris_5837:1.0E-8,Gymnocarpium_dryopteris_7059:1.0E-8,Gymnocarpium_dryopteris_dryopteris_7981:1.0E-8,Gymnocarpium_dryopteris_4601:1.0E-8,Gymnocarpium_disjunctum_4710:1.0E-8):0.0063539):0.00366306,Gymnocarpium_robertianum_7945:0.00278136):0.01300815):0.01122244):0.00437461,(Acystopteris_taiwaniana_4870:1.0E-8,Acystopteris_taiwaniana_6137:1.0E-8):0.00158336):7.6086E-4,Acystopteris_japonica_7978:1.0E-8);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr57721]


END;