#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 19, 2025; 2:07 GMT

TreeBASE (cc) 1994-2008

Study reference:
Plume O., Straub S.C., Tel-zur N., Cisneros A., Schneider B., & Doyle J. 2013. Testing
a Hypothesis of Intergeneric Allopolyploidy in Vine Cacti (Cactaceae: Hylocereeae).
Systematic Botany, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S13843]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=32;
        TAXLABELS
            Aporberocereus_innesii_208
            Epiphyllum_oxypetalum_217
            Epiphyllum_sp_216
            Epiphyllum_sp_219
            Hylocereus_bronxensis_178
            Hylocereus_costaricensis_3_4
            Hylocereus_costaricensis_35_Hylocereus_monacanthus_9_10_13_19_78_81_93_Hylocereus_undatus_28
            Hylocereus_escuintlensis_179_Hylocereus_sp_1_15_Hylocereus_undatus_22
            Hylocereus_guatemalensis_6
            Hylocereus_megalanthus_ALLINDS
            Hylocereus_monacanthus_11_12
            Hylocereus_monacanthus_112
            Hylocereus_monacanthus_7_Hylocereus_undatus_21
            Hylocereus_ocamponis_14
            Hylocereus_ocamponis_8
            Hylocereus_sp_108_Hylocereus_undatus_20_44
            Hylocereus_triangularis_18
            Hylocereus_undatus_25_26_33_62_117
            Hylocereus_undatus_27_36_38_40_42_44_88_91
            Pachycereus_pringlei_CC4
            Selenicereus_atropilosus_206
            Selenicereus_grandiflorus_subsp_donkelaarii_207
            Selenicereus_grandiflorus_subsp_grandiflorus_195_198_Selenicereus_pteranthus_203
            Selenicereus_grandiflorus_subsp_grandiflorus_212
            Selenicereus_hamatus_204_Selenicereus_pteranthus_200
            Selenicereus_inermis_209
            Selenicereus_inermis_214
            Selenicereus_sp_210_Selenicereus_spinulosus_211r
            Selenicereus_vagans_213r
            Stenocereus_griseus_CC2
            Stenocereus_gummosus_CC6
            Strophocactus_testudo_201r
            ;
END;

BEGIN TREES;
      TITLE CP_RAxML_Best;
      LINK TAXA = Taxa;
      TREE CP_RAxML = [&R] ((Stenocereus_gummosus_CC6:0.0037202639639657763,Stenocereus_griseus_CC2:7.520919620058771E-4)100:0.45,(Strophocactus_testudo_201r:0.017756038304614447,(Pachycereus_pringlei_CC4:0.007161128859699665,((Epiphyllum_oxypetalum_217:0.015428639109100193,(Epiphyllum_sp_219:0.0023417193217863683,Epiphyllum_sp_216:0.0023913970765241373)99:0.001862877057560512)100:0.011990955233274161,(Aporberocereus_innesii_208:0.009012026497512473,(Selenicereus_atropilosus_206:0.006506742455931889,(((Selenicereus_grandiflorus_subsp_donkelaarii_207:4.389682683336435E-4,(Selenicereus_grandiflorus_subsp_grandiflorus_195_198_Selenicereus_pteranthus_203:4.9060145140953E-7,Selenicereus_grandiflorus_subsp_grandiflorus_212:4.9060145140953E-7)100:0.0031820669096939273)99:0.004717810818350321,((Selenicereus_vagans_213r:0.0017177254830811105,Selenicereus_sp_210_Selenicereus_spinulosus_211r:0.0034735812466880436)100:0.006007726782682933,Selenicereus_hamatus_204_Selenicereus_pteranthus_200:0.009967265542927534)59:0.0011269096567979267)23:6.050529768862602E-4,((Selenicereus_inermis_214:0.0017771606408466412,Selenicereus_inermis_209:0.002365706623204832)89:0.0022877009400668817,((((((((Hylocereus_monacanthus_7_Hylocereus_undatus_21:4.9060145140953E-7,Hylocereus_undatus_25_26_33_62_117:5.879962382685721E-4)66:5.898352957404933E-4,Hylocereus_escuintlensis_179_Hylocereus_sp_1_15_Hylocereus_undatus_22:0.002375196652601067)32:4.9060145140953E-7,Hylocereus_undatus_27_36_38_40_42_44_88_91:5.90388334576904E-4)2:4.9060145140953E-7,Hylocereus_sp_108_Hylocereus_undatus_20_44:4.9060145140953E-7)66:6.507202126298452E-4,Hylocereus_triangularis_18:5.562670123583741E-4)85:0.001901009544694836,((Hylocereus_costaricensis_35_Hylocereus_monacanthus_9_10_13_19_78_81_93_Hylocereus_undatus_28:4.9060145140953E-7,Hylocereus_monacanthus_11_12:4.9060145140953E-7)98:5.912087905478896E-4,(Hylocereus_monacanthus_112:0.007932240097096366,Hylocereus_costaricensis_3_4:0.0012047411085052907)66:5.803039836763616E-4)79:5.341848009973192E-4)83:0.0028033497148911984,Hylocereus_megalanthus_ALLINDS:0.010508762264572058)60:0.0018910685195464455,((Hylocereus_guatemalensis_6:0.0011698040365423327,(Hylocereus_ocamponis_14:5.870995081049748E-4,Hylocereus_bronxensis_178:4.9060145140953E-7)87:5.897939095233165E-4)100:0.0030024661075061863,Hylocereus_ocamponis_8:0.003157169186103465)92:0.00413103665351586)88:0.004620251204006181)100:0.006569484032281428)100:0.006534484723381586)74:0.0036274020430742673)72:0.0019759337669507356)100:0.011941320326560203)7:0.0012340396121242937)100:0.45);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr60633]


END;