#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 18, 2025; 22:08 GMT TreeBASE (cc) 1994-2008 Study reference: Wahlert G.A., Chiarini F., & Bohs L. 2014. Phylogeny of the Carolinense Clade of Solanum Inferred from Nuclear and Plastid DNA Sequences. Systematic Botany, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S14032] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=99; TAXLABELS Solanum_abutiloides Solanum_accrescens Solanum_acerifolium Solanum_adhaerens Solanum_aethiopicum Solanum_agrarium Solanum_arboreum Solanum_argentinum Solanum_aridum_1 Solanum_aridum_2 Solanum_aridum_3 Solanum_asterophorum Solanum_aturense Solanum_bahamense Solanum_betaceum Solanum_buddleifolium Solanum_campechiense Solanum_candidum Solanum_carolinense_1 Solanum_carolinense_2 Solanum_carolinense_3 Solanum_carolinense_4 Solanum_carolinense_floridanum_1 Solanum_carolinense_floridanum_2 Solanum_cinereum Solanum_comptum_1 Solanum_comptum_2 Solanum_comptum_3 Solanum_comptum_4 Solanum_cordovense Solanum_crinitipes Solanum_crinitum Solanum_crotonoides Solanum_dimidiatum_1 Solanum_dimidiatum_2 Solanum_dimidiatum_3 Solanum_dimidiatum_4 Solanum_diploconos Solanum_donianum Solanum_dulcamara Solanum_elaeagnifolium_1 Solanum_elaeagnifolium_2 Solanum_elaeagnifolium_3 Solanum_ensifolium Solanum_euacanthum Solanum_furfuraceum Solanum_glaucophyllum Solanum_glutinosum Solanum_hasslerianum_1 Solanum_hasslerianum_2 Solanum_hieronymi_1 Solanum_hieronymi_2 Solanum_hieronymi_3 Solanum_hindsianum Solanum_hirtum Solanum_hoehnei Solanum_homalospermum Solanum_jamaicense Solanum_juvenale Solanum_laciniatum Solanum_lanceolatum Solanum_lasiocarpum Solanum_lycocarpum Solanum_melongena Solanum_microphyllum Solanum_mitlense Solanum_mortonii Solanum_moxosense_1 Solanum_moxosense_2 Solanum_multispinum_1 Solanum_multispinum_2 Solanum_multispinum_3 Solanum_nemorense Solanum_palinacanthum Solanum_paniculatum Solanum_paraibanum Solanum_perplexum_1 Solanum_perplexum_2 Solanum_perplexum_3 Solanum_piluiferum Solanum_pseudocapsicum Solanum_ptychanthum Solanum_pumilum_1 Solanum_pumilum_2 Solanum_refractum Solanum_reineckii_1 Solanum_reineckii_2 Solanum_rostratum Solanum_rupincola Solanum_sisymbriifolium_1 Solanum_sisymbriifolium_2 Solanum_stagnale Solanum_stenandrum Solanum_stramonifolium Solanum_thomasiifolium Solanum_torvum Solanum_tridynamum Solanum_viarum Solanum_wendlandii ; END; BEGIN TREES; TITLE Phylogeny_of_the_Solanum_carolinense_clade; LINK TAXA = Taxa; TREE Strict = [&R] (Solanum_laciniatum:0.01414078,(Solanum_dulcamara:0.02965328,Solanum_ptychanthum:0.02855712,((Solanum_hoehnei:0.00671144,Solanum_nemorense:0.01629456):0.00317211,(Solanum_diploconos:0.00715459,(Solanum_betaceum:0.0098155,Solanum_glaucophyllum:0.01474773):0.00207695):0.00813741,((Solanum_refractum:0.00752465,Solanum_wendlandii:0.00729524):0.01122407,((Solanum_abutiloides:0.00955769,Solanum_cordovense:0.00803513):0.01024676,(Solanum_arboreum:0.00848758,(Solanum_argentinum:0.01242724,Solanum_pseudocapsicum:0.00912292):0.00456043):0.01881244):0.00119616):0.00220729,(((Solanum_agrarium:0.00756671,Solanum_microphyllum:0.00794219,Solanum_stenandrum:0.00327245):0.01083057,((Solanum_accrescens:0.00741819,Solanum_stagnale:0.00669087):0.00297572,((Solanum_buddleifolium:0.02439325,Solanum_thomasiifolium:0.0013693):0.00492557,(Solanum_paraibanum:0.00348495,Solanum_rupincola:0.00216558):0.00537183):0.00172485):0.00155805):0.00474824,(((Solanum_palinacanthum:0.01375131,(Solanum_acerifolium:0.00843427,Solanum_viarum:0.00854569):0.00374041):0.00795046,(Solanum_hirtum:0.00456062,(Solanum_stramonifolium:0.00583617,(Solanum_candidum:6.2084E-4,Solanum_lasiocarpum:0.00124658):0.00239891):5.7634E-4):0.01444465):0.00202517,(Solanum_rostratum:0.02502662,(Solanum_mitlense:0.00507551,(Solanum_crinitum:0.00274151,Solanum_lycocarpum:0.0074329):0.00331851):0.00345524,(Solanum_hasslerianum_1:0.0058582,Solanum_sisymbriifolium_2:0.00440863,(Solanum_hasslerianum_2:0.0028817,Solanum_sisymbriifolium_1:0.00470218):0.0033432):0.0070916,(Solanum_campechiense:0.01608368,(((Solanum_hieronymi_1:8.6423E-4,Solanum_hieronymi_2:0.00364775,Solanum_hieronymi_3:0.0020022):0.02204785,(((Solanum_aethiopicum:0.00553925,Solanum_melongena:0.00615848):0.00357809,(Solanum_cinereum:0.00933598,Solanum_furfuraceum:0.00549315):0.00566057):0.00335481,(Solanum_euacanthum:0.00843998,((Solanum_hindsianum:0.00474647,Solanum_tridynamum:0.00446673):0.00409405,(Solanum_mortonii:0.00659349,(Solanum_homalospermum:0.00459841,(Solanum_elaeagnifolium_2:0.00224472,(Solanum_elaeagnifolium_1:0.00292115,Solanum_elaeagnifolium_3:0.00330904):0.00212859):0.00615873):0.00225986):0.00251891):0.00275119):5.8102E-4):0.00184359):0.00566644,((Solanum_crotonoides:0.00839372,(Solanum_crinitipes:0.00346487,(Solanum_glutinosum:0.00330381,(Solanum_donianum:0.00502766,Solanum_paniculatum:0.00641911):0.00173994,(Solanum_lanceolatum:0.00126008,Solanum_torvum:0.0012491):0.00376814):0.00167757):0.00660773):0.00193492,(((Solanum_multispinum_1:9.8501E-4,Solanum_multispinum_2:9.6597E-4,Solanum_multispinum_3:7.7979E-4):0.0121275,((Solanum_asterophorum:0.00893086,Solanum_piluiferum:0.01817875):0.00940374,(Solanum_bahamense:0.008,Solanum_ensifolium:0.00440079):0.0237442):0.00124311):0.00116406,((Solanum_jamaicense:0.00946097,(Solanum_adhaerens:0.00126775,Solanum_aturense:0.0019005):0.00520069):0.00712534,(((Solanum_reineckii_1:0.00101056,Solanum_reineckii_2:4.1233E-4):0.0154661,((Solanum_moxosense_1:1.0E-8,Solanum_moxosense_2:1.0E-8):0.02358695,((Solanum_juvenale:0.00316536,(Solanum_aridum_1:0.00240222,Solanum_aridum_2:0.00151728,Solanum_aridum_3:7.4918E-4):4.5183E-4):0.01187918,(Solanum_comptum_4:3.0586E-4,(Solanum_comptum_3:0.00160707,(Solanum_comptum_1:7.9527E-4,Solanum_comptum_2:9.5138E-4):7.8126E-4):6.3276E-4):0.0093771):0.00410306):0.00140325):0.00574025,(Solanum_dimidiatum_4:0.01162407,(((Solanum_dimidiatum_3:9.0212E-4,(Solanum_dimidiatum_1:0.00671717,Solanum_dimidiatum_2:1.0E-8):3.8213E-4):0.00161231,(Solanum_perplexum_1:1.0E-8,Solanum_perplexum_2:0.00208484,Solanum_perplexum_3:0.00904151):6.5676E-4):0.00210235,((Solanum_pumilum_1:0.00187235,Solanum_pumilum_2:0.01259356):0.00815897,(Solanum_carolinense_1:9.4746E-4,Solanum_carolinense_2:0.01264637,Solanum_carolinense_3:3.1399E-4,Solanum_carolinense_4:3.1652E-4,(Solanum_carolinense_floridanum_1:3.6873E-4,Solanum_carolinense_floridanum_2:9.1757E-4):9.1757E-4):0.0057198):0.00362758):0.00525429):0.00432876):0.00367936):7.711E-5):8.4492E-4):6.7151E-4):8.3848E-4):0.00570293):0.00411485):0.00242345):0.0107257):0.01046436):0.01414078); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70645] END;