#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 19, 2025; 2:05 GMT

TreeBASE (cc) 1994-2008

Study reference:
Fisher A.E., Clark L., & Kelchner S. 2013. Molecular phylogeny estimation of the
bamboo genus Chusquea (Poaceae: Bambusoideae: Bambuseae) and description of two
new subgenera. Systematic Botany, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S14424]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=68;
        TAXLABELS
            Chusquea_abietifolia
            Chusquea_albilanata
            Chusquea_andina
            Chusquea_antioquensis
            Chusquea_arachniformis
            Chusquea_aristata
            Chusquea_bambusoides
            Chusquea_bilimekii
            Chusquea_bradei
            Chusquea_coronalis
            Chusquea_costaricensis
            Chusquea_culeou
            Chusquea_cumingii
            Chusquea_exasperata
            Chusquea_fendleri
            Chusquea_foliosa
            Chusquea_gigantea
            Chusquea_glauca
            Chusquea_gracilis
            Chusquea_juergensii_B
            Chusquea_lehmannii
            Chusquea_leonardiorum
            Chusquea_leptophylla
            Chusquea_liebmannii
            Chusquea_longifolia
            Chusquea_longispiculata
            Chusquea_lorentziana
            Chusquea_loxensis
            Chusquea_maclurei
            Chusquea_maculata
            Chusquea_microphylla
            Chusquea_mimosa
            Chusquea_montana
            Chusquea_muelleri
            Chusquea_nudiramea
            Chusquea_oligophylla
            Chusquea_oxylepis
            Chusquea_paludicola
            Chusquea_patens
            Chusquea_perligulata
            Chusquea_perotensis
            Chusquea_pinifolia
            Chusquea_pittieri
            Chusquea_pohlii
            Chusquea_quila
            Chusquea_ramosissima
            Chusquea_robusta
            Chusquea_scabra
            Chusquea_scandens
            Chusquea_serpens
            Chusquea_spectabilis
            Chusquea_spencei
            Chusquea_subtessellata
            Chusquea_subtilis
            Chusquea_talamancensis
            Chusquea_tenella
            Chusquea_tessellata
            Chusquea_tomentosa
            Chusquea_tonduzii
            Chusquea_uliginosa
            Chusquea_uniflora
            Chusquea_urelytra
            Chusquea_virgata
            Chusquea_vulcanalis
            Chusquea_windischii
            Guadua_angustifolia
            Otatea_acuminata
            Rhipidocladum_harmonicum
            ;
END;

BEGIN TREES;
      TITLE Chusquea_Chloroplast_BI_Partitioned_40_mill;
      LINK TAXA = Taxa;
      TREE Chusquea_chloroplast_Bayesian_majority_rule_consensus = [&R] (Rhipidocladum_harmonicum:0.0051035,((Guadua_angustifolia:0.004649,Otatea_acuminata:0.004244)1.00:0.004087,(Chusquea_spectabilis:0.028025,(Chusquea_aristata:0.02815,((Chusquea_bradei:0.007501,(Chusquea_oligophylla:0.008214,(Chusquea_arachniformis:0.002993,Chusquea_bambusoides:0.0019,(Chusquea_oxylepis:0.001273,Chusquea_urelytra:0.001269)0.94:4.98E-4)0.56:6.11E-4)1.00:0.00317)1.00:0.005299,(((Chusquea_culeou:0.001318,(Chusquea_montana:0.001697,(Chusquea_gigantea:0.001036,Chusquea_uliginosa:4.95E-4)1.00:9.06E-4,(Chusquea_andina:2.56E-4,Chusquea_cumingii:0.001718,Chusquea_quila:9.94E-4)1.00:0.001122)0.99:8.16E-4)1.00:0.001653,((Chusquea_bilimekii:0.001275,(Chusquea_glauca:9.98E-4,Chusquea_perotensis:7.79E-4)0.93:4.99E-4)1.00:9.54E-4,(Chusquea_muelleri:0.002701,(Chusquea_virgata:0.002385,(Chusquea_liebmannii:9.31E-4,(Chusquea_coronalis:0.001585,Chusquea_pittieri:0.002031)1.00:0.001001)1.00:9.72E-4)0.99:7.51E-4)1.00:0.001171)1.00:9.69E-4)0.99:8.09E-4,((Chusquea_longispiculata:0.002912,(Chusquea_ramosissima:0.00569,Chusquea_tenella:0.002761)1.00:0.001234)1.00:0.001286,(Chusquea_abietifolia:0.004437,(((Chusquea_albilanata:0.002272,Chusquea_uniflora:0.001774)0.92:5.74E-4,(Chusquea_exasperata:0.001486,Chusquea_maclurei:0.001512,Chusquea_scabra:0.002226)0.68:4.92E-4)1.00:0.001855,((Chusquea_microphylla:0.005956,(Chusquea_nudiramea:0.002748,Chusquea_windischii:9.85E-4)1.00:9.99E-4,(Chusquea_pinifolia:0.001315,(Chusquea_leptophylla:4.88E-4,Chusquea_mimosa:0.001757,(Chusquea_gracilis:0.004676,Chusquea_juergensii_B:0.001851)0.79:4.99E-4)1.00:0.001206)1.00:0.001444)0.99:7.18E-4,((Chusquea_patens:0.003765,(Chusquea_pohlii:0.003257,(Chusquea_maculata:0.003652,Chusquea_serpens:0.002334)0.80:5.36E-4)0.65:4.99E-4)1.00:0.001806,((Chusquea_leonardiorum:0.003029,Chusquea_loxensis:0.001467)1.00:0.001955,(Chusquea_fendleri:0.003374,(Chusquea_perligulata:0.001769,Chusquea_robusta:0.001852,Chusquea_spencei:0.004593,((Chusquea_antioquensis:0.006601,Chusquea_lehmannii:0.002069,Chusquea_lorentziana:0.002213)0.51:9.25E-4,((Chusquea_scandens:0.001266,Chusquea_tessellata:0.002815)0.95:5.1E-4,(Chusquea_subtessellata:0.00374,(Chusquea_subtilis:0.002519,Chusquea_tomentosa:0.001281,(Chusquea_foliosa:0.001982,Chusquea_longifolia:8.83E-4)1.00:0.001428,(Chusquea_paludicola:7.79E-4,Chusquea_vulcanalis:0.001859,(Chusquea_costaricensis:0.003597,Chusquea_talamancensis:5.14E-4,Chusquea_tonduzii:0.00393)0.98:5.93E-4)0.99:5.59E-4)0.87:5.91E-4)0.70:5.53E-4)0.74:0.001061)0.77:4.98E-4)1.00:0.001125)0.99:7.72E-4)1.00:0.001411)0.95:5.1E-4)0.98:5.81E-4)0.58:5.12E-4):0.001301)1.00:0.001265)1.00:0.008642)1.00:0.002831)1.00:0.004911)1.00:0.006593)1.00:0.0051035);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr68868]


END;