#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 18, 2025; 18:59 GMT

TreeBASE (cc) 1994-2008

Study reference:
Alvarez-fuentes O., & Prather A. 2013. On the Classification of Thelypteridaceae:
A Preliminary Phylogenetic Analysis of Thelypteris Subgenus Amauropelta Based on
Plastid DNA Sequences. Systematic Botany, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S14614]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=55;
        TAXLABELS
            Acystopteris_japonica
            Christella_augescens
            Coryphopteris_seemannii
            Cyclosorus_aridus
            Cyclosorus_crassifolius
            Cyclosorus_esquirolii
            Cyclosorus_griffithii
            Cyclosorus_hispidulus
            Cyclosorus_interruptus
            Cyclosorus_simplex
            Cyclosorus_sp
            Cyclosorus_taiwanensis
            Cyclosorus_tottoides
            Cystopteris_protrusa
            Glaphyropteridopsis_erubescens
            Goniopteris_poiteana
            Gymnocarpium_oyamense
            Macrothelypteris_torresiana
            Metathelypteris_dayi
            Nannothelypteris_aoristisora
            Phegopteris_connectilis
            Phegopteris_decursivipinnata
            Plesioneuron_archboldiae
            Pneumatopteris_ecallosa
            Pseudophegopteris_aurita
            Sphaerostephanos_penniger
            Steiropteris_leprieurii
            Thelypteris_amphioxypteris
            Thelypteris_balbisii_balbisii
            Thelypteris_balbisii_var._longipilosa
            Thelypteris_basisceletica
            Thelypteris_consanguinea
            Thelypteris_corazonensis
            Thelypteris_firma
            Thelypteris_germaniana
            Thelypteris_germaniana_OAF38
            Thelypteris_glandulosolanosa
            Thelypteris_globulifera
            Thelypteris_gracilis
            Thelypteris_heteroclita
            Thelypteris_inabonensis
            Thelypteris_linkiana
            Thelypteris_nevadensis
            Thelypteris_oligocarpa
            Thelypteris_oligocarpa_OAF21
            Thelypteris_opposita
            Thelypteris_palustris
            Thelypteris_pilosula
            Thelypteris_resinifera
            Thelypteris_rosenstockii
            Thelypteris_rudis
            Thelypteris_rufa
            Thelypteris_rustica
            Thelypteris_sancta
            Trigonospora_ciliata
            ;
END;

BEGIN TREES;
      TITLE Thelypteridaceae_con;
      LINK TAXA = Taxa;
      TREE MajRule = [&R] ((Gymnocarpium_oyamense:0.08764482,(Cystopteris_protrusa:0.04106496,Acystopteris_japonica:0.05316134):0.01719882):0.019597345,((Macrothelypteris_torresiana:0.05568247,(Pseudophegopteris_aurita:0.01629569,(Phegopteris_connectilis:0.01244412,Phegopteris_decursivipinnata:0.02672473):0.01840044):0.01639518):0.01605313,(Thelypteris_palustris:0.0691962,((Steiropteris_leprieurii:0.05663809,((Cyclosorus_griffithii:0.04713911,Cyclosorus_tottoides:0.00958559):0.03481564,((Cyclosorus_sp:0.03281216,Cyclosorus_crassifolius:0.05063282):0.01125236,((Christella_augescens:0.01683313,Goniopteris_poiteana:0.05441056):0.01282325,(Glaphyropteridopsis_erubescens:0.01418343,((Plesioneuron_archboldiae:0.03565908,(Cyclosorus_interruptus:0.02608845,Cyclosorus_simplex:0.03219263):0.00219431):0.00391272,(Cyclosorus_aridus:0.01765291,((Cyclosorus_esquirolii:0.02064945,Cyclosorus_hispidulus:0.02220469):0.00354641,(Nannothelypteris_aoristisora:0.0318613,((Pneumatopteris_ecallosa:0.0262128,Trigonospora_ciliata:0.04711135):8.9815E-4,(Sphaerostephanos_penniger:0.02881473,Cyclosorus_taiwanensis:0.0027779):0.00723575):0.00126488):0.00514127):0.00366076):0.00306698):0.00524592):0.0073356):0.00622283):0.01538453):0.00254611):0.02028117,((Metathelypteris_dayi:0.02584197,Coryphopteris_seemannii:0.05367635):0.00413718,(Thelypteris_nevadensis:0.02935984,((Thelypteris_consanguinea:0.01049266,(Thelypteris_amphioxypteris:0.00648728,(Thelypteris_opposita:0.01437412,(Thelypteris_resinifera:1.0E-8,(Thelypteris_balbisii_var._longipilosa:0.0070173,Thelypteris_balbisii_balbisii:0.01616436):0.00650008):0.01279763):0.02848613):0.00883944):0.00248707,((Thelypteris_globulifera:0.00749537,Thelypteris_rufa:0.00870321):0.00311179,(Thelypteris_glandulosolanosa:0.0067441,((Thelypteris_firma:0.00137981,(Thelypteris_basisceletica:0.00186571,Thelypteris_sancta:0.06590266):0.00240684):0.00684936,((Thelypteris_oligocarpa:0.01330451,Thelypteris_oligocarpa_OAF21:0.00613188,Thelypteris_pilosula:1.0E-8):0.00245777,(Thelypteris_gracilis:0.00915528,Thelypteris_rudis:0.01608038,Thelypteris_rustica:0.00409952,((Thelypteris_inabonensis:0.00560988,(Thelypteris_germaniana:8.3498E-4,Thelypteris_germaniana_OAF38:0.00253858):0.00865838):0.00270696,((Thelypteris_corazonensis:0.0077897,Thelypteris_heteroclita:0.04455222):0.00804253,(Thelypteris_linkiana:0.02363055,Thelypteris_rosenstockii:0.01859086):0.01180629):0.00291623):0.00341933):0.00235248):7.5357E-4):0.00236626):8.13E-4):9.82E-6):0.0201578):0.02044907):0.01106303):0.01181288):0.01515256):0.019597345);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr67307]


END;