#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2021; 10:51 GMT TreeBASE (cc) 1994-2008 Study reference: Kenaley S.C., Smart L.B., & Hudler G.W. 2014. Genetic evidence for three discrete taxa of Melampsora (Pucciniales) affecting willows (Salix spp.) in New York State. Fungal Biology, 118(8): 704-720. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S15162] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=56; TAXLABELS Chrysomyxa_weirii__GU049472 'Melampsora abietis-populi AB116870' Melampsora_amygdalinae__AY444776 Melampsora_caprearum__AY444779 Melampsora_coleosporioides__AY652948 Melampsora_epiphylla__AY652947 Melampsora_epitea__AY471631 Melampsora_epitea__AY471639 Melampsora_epitea__AY471643 Melampsora_epitea__Mel_A Melampsora_epitea__Mel_B Melampsora_epitea__Mel_C Melampsora_epitea__Mel_D Melampsora_epitea__Mel_E Melampsora_epitea__Mel_F Melampsora_epitea__Mel_G Melampsora_epitea__Mel_H Melampsora_epitea__Mel_I Melampsora_epitea__Mel_J Melampsora_epitea__Mel_K Melampsora_epitea__Mel_L Melampsora_epitea__Mel_M Melampsora_epitea__Mel_N Melampsora_epitea__Mel_O Melampsora_epitea__Mel_P Melampsora_epitea__Mel_Q Melampsora_epitea__Mel_R Melampsora_epitea__Mel_S Melampsora_epitea__Mel_T Melampsora_epitea__Mel_U Melampsora_epitea__Mel_V Melampsora_epitea__Mel_W Melampsora_epitea__Mel_X Melampsora_epitea__Mel_Y Melampsora_epitea_GQ479249 Melampsora_iranica__FJ386432 'Melampsora larici-epitea JF825970' Melampsora_laricis__AB116863 'Melampsora laricis-epitea AY444777' 'Melampsora laricis-epitea AY444778' 'Melampsora laricis-pentandrae AY444771' Melampsora_medusae__AY375274 Melampsora_medusae__EU808031 Melampsora_medusae__EU808044 'Melampsora medusae-populina AY375282' Melampsora_pinitorqua__EU808035 Melampsora_populnea__EU808037 'Melampsora ribesii-purpureae AY444770' 'Melampsora salicis-albae FJ455127' Melampsora_spp.__AB116868 Melampsora_spp.__JF825971 Melampsora_spp.__JN646134 Melampsora_spp.__JN646135 Melampsora_spp.__JN646171 Melampsora_spp.__JN646232 Melampsora_spp.__JN646237 ; END; BEGIN TREES; TITLE Melampsora_Prelimingary_ITS_Bayesian_Analysis; LINK TAXA = Taxa; TREE Fig._2 = [&R] (Chrysomyxa_weirii__GU049472:0.47339,(((Melampsora_epitea__Mel_C:0.002356,((Melampsora_epitea__Mel_D:0.002259,(((Melampsora_epitea__Mel_E:0.00443,Melampsora_epitea__Mel_F:0.002435)1.00:0.031025,Melampsora_epitea__Mel_G:0.004466)0.17:0.002332,(Melampsora_epitea__Mel_H:0.002267,Melampsora_epitea__AY471643:0.013764)0.17:0.002232)0.53:0.005528)0.65:0.00565,Melampsora_epitea__Mel_I:0.002278)0.34:0.002957)1.00:0.011119,Melampsora_epitea__Mel_J:0.002683)1.00:0.027081,(((Melampsora_populnea__EU808037:0.002547,Melampsora_pinitorqua__EU808035:0.002547)0.34:0.002518,Melampsora_laricis__AB116863:0.002455)0.99:0.016199,((Melampsora_medusae__EU808044:0.00262,(Melampsora_medusae__AY375274:0.00341,Melampsora_medusae__EU808031:0.002519)0.24:0.003211)0.23:0.003177,'Melampsora medusae-populina AY375282':0.003257)1.00:0.062093)0.71:0.010398)1.00:0.061471,(((Melampsora_spp.__AB116868:0.01796,((((((((Melampsora_epitea__Mel_K:0.004652,Melampsora_epitea__Mel_M:0.002343)0.28:0.00237,(Melampsora_epitea__Mel_L:0.002367,Melampsora_epitea__AY471639:0.009511)0.98:0.00464)0.65:0.004442,Melampsora_epitea__Mel_Q:0.00234)0.20:0.004229,Melampsora_epitea__Mel_U:0.002342)0.09:0.004079,(Melampsora_epitea__Mel_S:0.002372,Melampsora_epitea__Mel_X:0.002358)0.06:0.002342)0.00:0.002249,((Melampsora_epitea__Mel_W:0.004781)0.11:0.003455,(Melampsora_epitea__Mel_N:0.004762,Melampsora_epitea__Mel_V:0.002331)0.06:0.002342)0.00:0.002423)0.02:0.002343,Melampsora_epitea__Mel_R:0.004634)0.19:0.004163,((Melampsora_epitea__Mel_P:0.002387,Melampsora_epitea__Mel_T:0.003832)0.44:0.003621,Melampsora_epitea__Mel_Y:0.002467)0.77:0.004727)1.00:0.084101)0.90:0.01769,'Melampsora abietis-populi AB116870':0.01594)1.00:0.045141,((((((Melampsora_epiphylla__AY652947:0.007262,(Melampsora_coleosporioides__AY652948:0.025592,Melampsora_amygdalinae__AY444776:0.011101)1.00:0.029567)0.23:0.003441,'Melampsora laricis-epitea AY444777':0.00771)0.50:0.005411,(('Melampsora laricis-epitea AY444778':0.007404,'Melampsora larici-epitea JF825970':0.00276)0.57:0.004324,Melampsora_spp.__JN646232:0.002821)0.46:0.004693)0.31:0.004855,((((((Melampsora_epitea__Mel_A:0.002328,Melampsora_epitea__Mel_B:0.002299)0.22:0.00268,Melampsora_epitea_GQ479249:0.002374)0.29:0.004281,Melampsora_spp.__JN646171:0.00515)0.25:0.004264,Melampsora_spp.__JN646134:0.002603)0.50:0.004496,Melampsora_epitea__AY471631:0.002673)1.00:0.01321,(Melampsora_spp.__JN646237:0.014022,Melampsora_spp.__JN646135:0.006592)0.54:0.005195)1.00:0.012316)0.85:0.007755,Melampsora_caprearum__AY444779:0.012023)0.95:0.014928,(((('Melampsora ribesii-purpureae AY444770':0.03026,'Melampsora salicis-albae FJ455127':0.019387)0.84:0.010781,Melampsora_spp.__JF825971:0.024598)0.60:0.007927,Melampsora_iranica__FJ386432:0.018468)0.92:0.011468,'Melampsora laricis-pentandrae AY444771':0.069578)0.83:0.013183)1.00:0.085752)0.42:0.012252); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr69446] END;