#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 18, 2025; 20:38 GMT

TreeBASE (cc) 1994-2008

Study reference:
Doust A., Penly A., Jacobs S., & Kellogg E. 2007. Congruence, Conflict, and Polyploidization
Shown by Nuclear and Chloroplast Markers in the Monophyletic “Bristle
Clade” (Paniceae, Panicoideae, Poaceae). Systematic Botany, 32(3): 531-544.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1731]

BEGIN TAXA;
        TITLE  kn1_reduced;
        DIMENSIONS NTAX=37;
        TAXLABELS
            'Cenchrus calyculatus A-a'
            'Cenchrus ciliaris 2-D-a'
            Cenchrus_echinatus_D
            'Cenchrus myosuroides E-b'
            'Cenchrus pilosus E-a'
            'Cenchrus setigerus F-b'
            'Ixophorus unisetus 1-T-a'
            'Panicum miliaceum I-a'
            'Paspalidium aversum G-b'
            'Paspalidium distans 2-F-a'
            'Paspalidium jubiflorum E-a'
            'Pennisetum alopecuroides B-a'
            'Pennisetum flaccidum 1-B'
            'Pennisetum glaucum E-b'
            Pennisetum_villosum_F
            'Pseudoraphis paradoxa F-b'
            Setaria_barbata_A
            'Setaria geniculata G-a'
            'Setaria grisebachii F-a'
            'Setaria italica 1-H'
            'Setaria palmifolia F-a'
            'Setaria parviflora G-a'
            'Setaria poiretiana 1-B-a'
            'Setaria poiretiana 2-B-b'
            'Setaria pumila E-b'
            'Setaria sphacelata A-b'
            'Setaria verticillata 1-O'
            'Setaria verticillata 2-G-a'
            'Setaria viridis 2-C'
            Spinifex_sericeus_H
            'Stenotaphrum secundatum I-b'
            'Zuloagea bulbosa 1-R-b'
            'Zuloagea bulbosa 2-R-b'
            'Zuloagea bulbosa 3-O-a'
            'Zuloagea bulbosa 4-F-b'
            'Zygochloa paradoxa 1-G-a'
            'Zygochloa paradoxa 2-G-a'
            ;
END;

BEGIN TREES;
      TITLE Tb8203;
      LINK TAXA = kn1_reduced;
      TREE Fig_5_kn1 = [&R] ('Panicum miliaceum I-a',((((('Cenchrus calyculatus A-a','Cenchrus myosuroides E-b','Cenchrus pilosus E-a'),('Cenchrus ciliaris 2-D-a',(Cenchrus_echinatus_D,'Cenchrus setigerus F-b'))),(('Pennisetum alopecuroides B-a',('Pennisetum glaucum E-b',Pennisetum_villosum_F)),'Pennisetum flaccidum 1-B')),(((('Paspalidium aversum G-b','Paspalidium distans 2-F-a'),'Paspalidium jubiflorum E-a'),'Stenotaphrum secundatum I-b'),('Setaria grisebachii F-a',((('Zuloagea bulbosa 4-F-b',('Zuloagea bulbosa 3-O-a','Zuloagea bulbosa 2-R-b')),'Zuloagea bulbosa 1-R-b'),'Ixophorus unisetus 1-T-a')))),(((('Setaria italica 1-H','Setaria viridis 2-C'),'Setaria verticillata 2-G-a'),('Pseudoraphis paradoxa F-b',(Spinifex_sericeus_H,('Zygochloa paradoxa 1-G-a','Zygochloa paradoxa 2-G-a')))),('Setaria geniculata G-a',(('Setaria parviflora G-a','Setaria sphacelata A-b'),'Setaria pumila E-b')))),(((Setaria_barbata_A,'Setaria poiretiana 1-B-a'),('Setaria palmifolia F-a','Setaria poiretiana 2-B-b')),'Setaria verticillata 1-O'));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr966]


END;