#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on July 01, 2025; 6:44 GMT

TreeBASE (cc) 1994-2008

Study reference:
Chau J.H., Rahfeldt W.A., & Olmstead R.G. 2017. Comparison of taxon-specific versus
general locus sets for targeted sequence capture for plant phylogenomics. Applications
in Plant Sciences, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S21931]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=46;
        TAXLABELS
            Buddleja_albiflora
            Buddleja_alternifolia
            Buddleja_americana
            Buddleja_anchoensis
            Buddleja_aromatica
            Buddleja_asiatica
            Buddleja_auriculata
            Buddleja_blattaria
            Buddleja_brachystachya
            Buddleja_caryopteridifolia
            Buddleja_colvilei
            Buddleja_coriacea
            Buddleja_crispa
            Buddleja_curviflora
            Buddleja_davidii
            Buddleja_delavayi
            Buddleja_dysophylla
            Buddleja_elegans_subsp._elegans
            Buddleja_fallowiana
            Buddleja_forrestii
            Buddleja_glomerata
            Buddleja_interrupta
            Buddleja_japonica
            Buddleja_lindleyana
            Buddleja_loricata
            Buddleja_madagascariensis
            Buddleja_marrubiifolia
            Buddleja_microstachya
            Buddleja_myriantha
            Buddleja_nitida
            Buddleja_nivea
            Buddleja_normaniae
            Buddleja_officinalis
            Buddleja_polystachya
            Buddleja_pulchella
            Buddleja_racemosa
            Buddleja_saligna
            Buddleja_salviifolia
            Buddleja_sessiliflora
            Buddleja_subcapitata
            Buddleja_tucumanensis
            Buddleja_utahensis
            Buddleja_virgata
            Buddleja_yunnanensis
            Scrophularia_nodosa
            Teedia_lucida
            ;
END;

BEGIN TREES;
      TITLE Buddleja_SVD_Quartets_from_APVO_SSC_loci;
      LINK TAXA = Taxa;
      TREE Appendix_4C = [&R] (Scrophularia_nodosa,(Teedia_lucida,(Buddleja_virgata,(((Buddleja_loricata,(Buddleja_auriculata,Buddleja_salviifolia)1.00000000)0.71000000,(Buddleja_saligna,(Buddleja_glomerata,Buddleja_dysophylla)0.79000000)0.90000000)0.88000000,(Buddleja_normaniae,(Buddleja_pulchella,((Buddleja_blattaria,((Buddleja_nitida,(Buddleja_americana,(Buddleja_coriacea,Buddleja_sessiliflora)0.07000000)0.06000000)0.19000000,((Buddleja_utahensis,(Buddleja_racemosa,Buddleja_marrubiifolia)1.00000000)0.93000000,((Buddleja_elegans_subsp._elegans,Buddleja_interrupta)0.96000000,(Buddleja_anchoensis,(Buddleja_aromatica,Buddleja_tucumanensis)0.20000000)0.71000000)0.70000000)1.00000000)0.94000000)1.00000000,((Buddleja_polystachya,Buddleja_madagascariensis)0.66000000,(Buddleja_asiatica,(Buddleja_colvilei,((Buddleja_forrestii,((Buddleja_fallowiana,Buddleja_davidii)0.99000000,(Buddleja_myriantha,(Buddleja_nivea,Buddleja_albiflora)0.94000000)0.58000000)1.00000000)1.00000000,(Buddleja_alternifolia,(Buddleja_crispa,((Buddleja_microstachya,Buddleja_delavayi)1.00000000,((Buddleja_lindleyana,(Buddleja_curviflora,Buddleja_japonica)1.00000000)1.00000000,((Buddleja_subcapitata,Buddleja_yunnanensis)1.00000000,(Buddleja_caryopteridifolia,(Buddleja_officinalis,Buddleja_brachystachya)1.00000000)0.70000000)1.00000000)1.00000000)0.87000000)0.87000000)0.56000000)0.33000000)0.84000000)1.00000000)0.99000000)0.37000000)0.99000000)0.87000000)0.58000000)0.95000000)0.99000000);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr108562]


END;