#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 7:39 GMT TreeBASE (cc) 1994-2008 Study reference: Rodriguez F., Spooner D., & Rodriguez F. 2009. Nitrate reductase phylogeny of potato (Solanum sect. Petota) genomes with emphasis on the origins of the polyploid species. Systematic Botany, 34(1): 207-219. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S2206] BEGIN TAXA; TITLE TaxonLabelSet14030; DIMENSIONS NTAX=92; TAXLABELS Solanum_acaule_1 Solanum_acaule_2 Solanum_agrimonifolium_1 Solanum_agrimonifolium_2 Solanum_agrimonifolium_3 Solanum_agrimonifolium_4 Solanum_albornozii Solanum_andreanum Solanum_berthaulthii Solanum_boliviense Solanum_brevicaule_1 Solanum_brevicaule_2 Solanum_bukasovii Solanum_bulbocastanum Solanum_cardiophyllum Solanum_chacoense Solanum_chomatophilum Solanum_clarum Solanum_colombianum_1 Solanum_colombianum_2 Solanum_colombianum_3 Solanum_demisum_1 Solanum_demisum_2 Solanum_demisum_3 Solanum_demisum_4 Solanum_demisum_5 Solanum_demisum_6 Solanum_ehrenbergii_1 Solanum_ehrenbergii_2 Solanum_etuberosum Solanum_gandarillasii Solanum_hjertingii_1 Solanum_hjertingii_2 Solanum_immite Solanum_infundibuliforme_1 Solanum_infundibuliforme_2 Solanum_iopetalum_1 Solanum_iopetalum_2 Solanum_jamesii Solanum_leptophyes Solanum_lesteri Solanum_lignicaule Solanum_longiconicum_1 Solanum_longiconicum_2 Solanum_lycopersicum Solanum_megistacrolobum Solanum_microdontum Solanum_morelliforme Solanum_oplocense_A1 Solanum_oplocense_A2 Solanum_oplocense_A3 Solanum_oplocense_A4 Solanum_oplocense_A5 Solanum_oplocense_A6 Solanum_oplocense_B1 Solanum_oplocense_B2 Solanum_oplocense_B3 Solanum_oplocense_B4 Solanum_palustre Solanum_paucijugum_1 Solanum_paucijugum_2 Solanum_paucijugum_3 Solanum_paucijugum_4 Solanum_pinnatisectum Solanum_polyadenium Solanum_raphanifolium_1 Solanum_raphanifolium_2 Solanum_schenckii_1 Solanum_schenckii_2 Solanum_schenckii_3 Solanum_schenckii_4 Solanum_schenckii_5 Solanum_schenckii_6 Solanum_sparsipilum_1 Solanum_sparsipilum_2 Solanum_stenophyllidium Solanum_stoloniferum_A1 Solanum_stoloniferum_A2 Solanum_stoloniferum_A3 Solanum_stoloniferum_A4 Solanum_stoloniferum_B1 Solanum_stoloniferum_B2 Solanum_stoloniferum_B3 Solanum_stoloniferum_B4 Solanum_tarijense Solanum_trifidum Solanum_tuquerrense_1 Solanum_tuquerrense_2 Solanum_tuquerrense_3 Solanum_tuquerrense_4 Solanum_verrucosum Solanum_violaceimarmoratum ; END; BEGIN TREES; TITLE Tb9396; LINK TAXA = TaxonLabelSet14030; TREE Fig._2 = [&R] ((Solanum_palustre,Solanum_etuberosum)Solanum_Section_Etuberosum,Solanum_lycopersicum,((((((((((((Solanum_acaule_1,Solanum_acaule_2,(Solanum_demisum_1,Solanum_demisum_2)),(Solanum_raphanifolium_1,Solanum_raphanifolium_2)),(((Solanum_agrimonifolium_1,Solanum_colombianum_1),Solanum_longiconicum_1),Solanum_violaceimarmoratum),Solanum_bukasovii,Solanum_microdontum),Solanum_lignicaule),((Solanum_berthaulthii,Solanum_tarijense),Solanum_infundibuliforme_1),Solanum_sparsipilum_1),(Solanum_brevicaule_1,Solanum_infundibuliforme_2)),Solanum_chacoense,Solanum_gandarillasii),Solanum_boliviense),Solanum_megistacrolobum)Solanum_Clade_4a._Genome_A,((((((((Solanum_iopetalum_1,Solanum_verrucosum),Solanum_hjertingii_1,Solanum_stoloniferum_B1),Solanum_demisum_3),Solanum_demisum_4,Solanum_stoloniferum_A1,Solanum_schenckii_1),(Solanum_demisum_5,Solanum_demisum_6),(Solanum_stoloniferum_A2,Solanum_schenckii_2)),((Solanum_oplocense_A1,Solanum_oplocense_A2),Solanum_oplocense_A3)),Solanum_brevicaule_2,(Solanum_leptophyes,Solanum_sparsipilum_2),Solanum_oplocense_A4,(Solanum_oplocense_B1,Solanum_oplocense_B2)),((Solanum_oplocense_A5,Solanum_oplocense_A6),(Solanum_oplocense_B3,Solanum_oplocense_B4)))Solanum_Clade_4b._Genome_A)Solanum_Clade_4._Genome_A,(((((Solanum_stenophyllidium,Solanum_cardiophyllum),Solanum_bulbocastanum),((Solanum_ehrenbergii_1,Solanum_ehrenbergii_2),(Solanum_stoloniferum_A3,Solanum_stoloniferum_A4,Solanum_hjertingii_2,Solanum_stoloniferum_B2,Solanum_stoloniferum_B3,Solanum_stoloniferum_B4))),(((Solanum_jamesii,Solanum_pinnatisectum),(Solanum_schenckii_3,Solanum_schenckii_4)),Solanum_trifidum)),(Solanum_clarum,Solanum_morelliforme),(Solanum_lesteri,Solanum_polyadenium))),((((((((Solanum_agrimonifolium_2,Solanum_agrimonifolium_3,Solanum_agrimonifolium_4),Solanum_iopetalum_2,((Solanum_colombianum_3,Solanum_colombianum_2),Solanum_longiconicum_2)),(Solanum_tuquerrense_1,Solanum_tuquerrense_2)),Solanum_andreanum),((Solanum_paucijugum_1,Solanum_paucijugum_2),(Solanum_schenckii_5,Solanum_schenckii_6))),Solanum_albornozii),(Solanum_chomatophilum,(Solanum_paucijugum_3,Solanum_paucijugum_4,Solanum_tuquerrense_3,Solanum_tuquerrense_4))),Solanum_immite)Solanum_Clade_3._Genome_C._D._P_or_Ap)Solanum_Section_Petota); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr3175] END;