#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 18, 2025; 20:38 GMT

TreeBASE (cc) 1994-2008

Study reference:
Whitlock B., & Baum D. 1999. Phylogenetic relationships of Theobroma and Herrania
based on sequences of the nuclear gene vicilin. Systematic Botany, 24(2): 128-138.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S412]

BEGIN TAXA;
        TITLE  TaxonLabelSet9935;
        DIMENSIONS NTAX=30;
        TAXLABELS
            Abroma_augusta
            Guazuma_ulmifolia_1
            Guazuma_ulmifolia_2
            Herrania_cuatrecasana
            Herrania_kanukuensis
            Herrania_nitida
            Herrania_nycterodendron
            Herrania_purpurea_1
            Herrania_purpurea_2
            Herrania_umbratica
            Theobroma_angustifolium
            Theobroma_bicolor_A
            Theobroma_bicolor_B
            Theobroma_cacao_A
            Theobroma_cacao_B1
            Theobroma_cacao_B2
            Theobroma_cacao_C
            Theobroma_chocoense_1
            Theobroma_chocoense_2
            Theobroma_gileri_1
            Theobroma_gileri_2
            Theobroma_grandiflorum_1
            Theobroma_grandiflorum_2
            Theobroma_mammosum
            Theobroma_microcarpum_1
            Theobroma_microcarpum_2
            Theobroma_simiarum
            Theobroma_speciosum
            Theobroma_velutinum
            taxon_30
            ;
END;

BEGIN TREES;
      TITLE Tb5286;
      LINK TAXA = TaxonLabelSet9935;
      TREE Fig._3 = [&R] (Abroma_augusta,(Rulingia_madagascariensis,((((((((Theobroma_simiarum,(Theobroma_chocoense_2,Theobroma_chocoense_1)Theobroma_chocoense),(Theobroma_mammosum,Theobroma_angustifolium)),(Theobroma_grandiflorum_1,Theobroma_grandiflorum_2)Theobroma_grandiflorum),((Theobroma_microcarpum_1,Theobroma_microcarpum_2)Theobroma_microcarpum,(Theobroma_gileri_1,Theobroma_gileri_2)Theobroma_gileri)),(Theobroma_cacao_A,Theobroma_cacao_C,(Theobroma_cacao_B1,Theobroma_cacao_B2))Theobroma_cacao),((Theobroma_speciosum,Theobroma_velutinum),(Theobroma_bicolor_A,Theobroma_bicolor_B)Theobroma_bicolor)),((Herrania_nitida,(Herrania_cuatrecasana,Herrania_nycterodendron),Herrania_kanukuensis),(Herrania_umbratica,(Herrania_purpurea_1,Herrania_purpurea_2)Herrania_purpurea))),(Guazuma_ulmifolia_1,Guazuma_ulmifolia_2)Guazuma_ulmifolia)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr3357]


END;