#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on December 27, 2025; 11:56 GMT

TreeBASE (cc) 1994-2008

Study reference:
Bininda-emonds O., Decker-flum D., & Gittleman J. 2001. The utility of chemical signals
as phylogenetic characters: an example from the Felidae. Biological Journal
of the Linnean Society, 72(1): 1-15.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S676]

[ The following blocks are input data for analysis step 1010 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep1010;
        DIMENSIONS NTAX=17;
        TAXLABELS
            Acinonyx_jubatus
            Caracal_caracal
            Catopuma_temminckii
            Felis_margarita
            Leopardus_pardalis
            Leptailurus_serval
            Lynx_rufus
            Oncifelis_geoffroyi
            Otocolobus_manul
            Panthera_leo
            Panthera_onca
            Panthera_pardus
            Panthera_tigris
            Prionailurus_bengalensis
            Puma_concolor
            Suricata_suricatta
            Uncia_uncia
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M3572]

	TITLE Neutral_lipids;
	LINK TAXA = TaxaForAnalysisStep1010;
	DIMENSIONS NCHAR=477;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -;

MATRIX
[                                    10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       ]
[                                     .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .       ]
Acinonyx_jubatus             000000000000000000100000000000000001001010110000011101001000100100001001000000001100001000010100101000000100100111001000000010001100001010110001001000000100110001001101100001100100000100010010100000001010010000000001110000000001000010000000000000001001010000010001100110000000001001100101000000101000000000001001000000000000000000001100000010000110010000100000000000000000000010000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Caracal_caracal              000000000000000000000000000000000000001000010000000100011000001001010010000101001110100100001010010101000101001101000100000010100000000001110011001000100000000001110111000111100100000000011011100000010011000000010001001000000011000010000001000000001010000000101000000011000000001000100000110000000000000000101001001001000100000000100100010000000010011000000100001010000101010001001001000110000101001000000010000001000100101001001010000110000000000000000000011000000000000000000
Catopuma_temminckii          000000000000000001000000000010000010001100010000010100011000001001010010000100001100100100000010010101000101001101000101000010100000000001110011001000100000000001110111000111100100000100011011100000010011000001010001001000000011000010100001000100001010000000101010000001000000001000100000100000000000010000101001001001000111000100100100010000000010011000000100000010010001010001001101000110000100000000000010000000000100101001001010000000000000000000000100011000000000000000000
Felis_margarita              000000001000000000000000000001000000001000010000000100011100001000010000000010001000001100000100100011000100110111000000000010010000001101100111001010000010000001100111000011101100000100010011100000000011111010100001000001000101001010000000010010100100000001001001010110010000000100100000100000010010000100001001000101101000000000000100001000000010011000000010000000000011000000000000010110000000010000100000000000000010000010010010010000100100000000000001000001000000000000001
Leopardus_pardalis           000000000000000000000000000000100000001000010000000100011000001001010000000000001100000100000100100011000100010101000010001010010000001001110011000010000000000100100111000011101100000100011011110000000011110000000001000010000001000010000000000000001100000000001001010110000000001000100000100000000010000000001111100001001000000000010100000000000010011000010101000000100001000000000000010110000010010000000000000000010000010000000010000000000000000000000000000000000000000100000
Leptailurus_serval           000000000000000000000000000000000000001000010000000100011000001000010000000000001101000100000101110101100101001101000000001010010000100001111011000000000000000100110111011011100101000100111111100010000111110000000001000100000001000010000010000000001100000000001010010011000000001000100000100000000000000001001001000001000000000010000100000000000011011000000100000000000001000000000000010110000000000000000010000000000000000000000010000000001000000000000000000000000000000000000
Lynx_rufus                   010001000010100011001001000010000010001100010100000100011000001001010010000101001110100100000000010101000101001101000100000010100000000001110011001100100000000001110111000111100100000000001011100000010011000000010001001000000011000010000001000000011010000000101000000011000010001000110000101000000000000000101001001001010100101010100100010000000010011000000100001010000101010001001001000110000101001000001110000001000100101001001010000110000000100000000000011000001000110001100
Oncifelis_geoffroyi          000000000000000100000000000000100000001000010000000100011000001001010000000000001100000100000100100111000100010101000010001010010000001001111011000010000000000100100111000011101100000100011011110000000011110000000001000010000001000010000000000000001100000000001101010110000000001000100000100000000010000000001111000001001000000000010100000000000010011000010101000000100001000000000000010110000010110000000000000000000000010000000010000000000000000000000000000000000000000000000
Otocolobus_manul             000000001000100000000010100101100000001000110010000100011100001000010000000010001000001100010100100011000100110111010000100010010000001111100111101010001010000001100111000011101100000100010011100000000011111010100001000001000101001010000000010010100100000001001001010110010000000000100000100000010010000100001001000101101000000000000100001000000010011000000010000000000011000000000000010110000000010000100000000000000010000010010010010000100100000100000001000001000000000000000
Panthera_leo                 000000010000000000100010000000001000111001010000001110001001000100000000010000001100001000000100100000010110000100000000000110001100011011110000001001000000100011001000000000000010010110010000100101000011010100001010010000101001100000011000000000001000000000000001001110000001011000101110000010100101100000001001000000000000000000000110000101001010000101001000100001001000000000000000010100111000000101000001010110000000000100000001000000000001000001000000000000110001001010010
Panthera_onca                000010000000000010110010000000000000011000000100100110101001000000000000011000101100001000000100100000001110000100000000000110001111011011110000001001010100100011001001100000000010000110010000000101000011010100001010010000101001010011010000000000001000100000010001000110001001011000100111000011101001001010001001000000000000000001000100000101010010110000001000100001000000001000010000010100001000000001010001010110000001000100000001100001010010000010001000000000000010000000000
Panthera_pardus              000000000100000000100100001000010000101000000000001110001001000100001000010000001100011000000100100000001110000100000000000110001101011011110000001001000000100011001000000000000010010111010000100101000011010100001010010000101001100010010000100000001000100000000001000110001001011000101110000010100101000000001001000000000000000000000110000101011010100101001000110001001000101000000000010100111000000101010001010110000000000100000001000000000001000001000000000000110001001010010
Panthera_tigris              101100110000000000110000100100000101001010011001000100001000010010101001001000011100001010100100100000000110100111001000000111001111001011110001011100000101101011001001100000000110101110010010101100100011010100000100110000000001010111000100001000001001000100010001000110000100101010000101000101000101001010011001010000000000010000000101000010100010010000001000100001000000000000100010110101001000000010000000000010001000000100100001001000010010001010100010000010000100000000000
Prionailurus_bengalensis     000000001000000000000000000000000000001000010000000100011000001000010000000000001100000100000101110101100101001101000000000010000000100001110011001000000000000100110111011011100100000100111111100010000111010000000001000100000001000010000010000000001100000000001010010011000000001000100000100000000000000001001001000001000000000010000100000000000011011000000100000000000001000000000000011110000000000000000010000000000100000000000010000000001000000000000000010100000000000000000
Puma_concolor                101000100101011000110100100100000101001010111001000100011010011010111001001000011100001110100100100001000110100111001000000111001001001011110111011100000100000011000011100001110100000110010011100100000010010000000100110000000001010111000100001000001001001110011001100110000100101000000101100001000101000000001001000001000000010000000100100010100010011000001000100001000001000000000010010110001000000011000000000000000000000000000010000000000000000000010000000000000000000000000
Suricata_suricatta           000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Uncia_uncia                  101100110101011000110100100100000101001010111001010100001010010010101001001000011100001010100100100000000110100111001000000111001101001011110001011100000101101011001001100000000110101110010010100100100011010100000100110000000001010111000100001000001001000100010001000110000100101010000101000101000101001010011001010000000000010000000101000010100010010010001000100101000000000100100010110101001000000010000000101010101000000100100101001000010010001010100010100010000000000000000
;
END;

[ The following blocks are output data for analysis step 1010 ]
BEGIN TREES;
      TITLE Tb5786;
      LINK TAXA = TaxaForAnalysisStep1010;
      TREE Fig._2B = [&R] (Suricata_suricatta,((Acinonyx_jubatus,(Puma_concolor,(Panthera_tigris,Uncia_uncia)),((Panthera_leo,Panthera_pardus),Panthera_onca)),(((Prionailurus_bengalensis,Leptailurus_serval),((Caracal_caracal,Lynx_rufus),Catopuma_temminckii)),((Oncifelis_geoffroyi,Leopardus_pardalis),(Otocolobus_manul,Felis_margarita))))Felidae);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr3680]


END;