#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 11:52 GMT TreeBASE (cc) 1994-2008 Study reference: Wikstrm N., & Kenrick P. 2000. Relationships of Lycopodium and Lycopodiella based on combined plastid rbcL gene and trnL intron sequence data. Systematic Botany, 25(3): 495-510. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S705] [ The following blocks are input data for analysis step 1071 ] BEGIN TAXA; TITLE TaxaForAnalysisStep1071; DIMENSIONS NTAX=24; TAXLABELS Huperzia_campiana Huperzia_hippuridea Huperzia_selago Lycopodiella_alopecuroides Lycopodiella_caroliniana Lycopodiella_cernua Lycopodiella_glaucescens Lycopodiella_inundata Lycopodiella_lateralis Lycopodiella_pendulina Lycopodium_alpinum Lycopodium_annotinum Lycopodium_casuarinoides Lycopodium_clavatum Lycopodium_deuterodensum Lycopodium_fastigiatum Lycopodium_jussiaei Lycopodium_magellanicum Lycopodium_obscurum Lycopodium_scariosum Lycopodium_vestitum Lycopodium_volubile Lycopodium_wightianum Phylloglossum ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M3683] TITLE 'trnL-intron'; LINK TAXA = TaxaForAnalysisStep1071; DIMENSIONS NCHAR=778; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Huperzia_campiana GACTTG---ATTTAATTGAGCCTTAGTTTAGAAACTCACTAAATGATAGCTTTCAGATTCGGGGAAACCTTAGTAGAAGGAGTAGGCAATCCTGAGCCAAATCCT----GT-----TTAGA-------------GGGATAGGTGCAGAGACTCGATGGGGGCCATCCTAATAACT---GATTGTCTTACGACT----AGTACTATGTTGT---------ATCCTATTATTCATATAATAAA--TCCTT-----------------------------------------------------------------------GGAGTTCTAAAATACTA--------------------TTGGGCA----------TGAATCATATTGAAAA-CTTG------------------------------------------AATTATGTTGTGGGTCCA------AGCAAT----GAGTAAACA-TTGATTTATT-------GAGCCCATT-AAAATGA-AAAATTA-----------------TTTATTATTTTTATGTAATTA------AATACTTATTATCT-CAATATTTTTTTTTATTATTTAATAGTTATTGCAATACAACAGATAATTT-----------------------------TTTATTTTTTAGTAGATGATCAGACGAGGATAAAGGTAGAGTCCAGTTTTTAGTGCTGATCTCAGCAACGATGCGAATCGTATTAAAAAGAAAATTCGTTGGCTTTATAA?CCGTGAG Huperzia_hippuridea GACTTG---ATTTAATTGAGCCTTAGTTTAGAAACTTACTAAATGATAGCTTTCAGATTCGGGGAAACCTTAGTAGAAGGAGTAGGCAATCCTGAGCCAAATCCT----GT-----TTAGA-------------GGGATAGGTGCAGAGACTCGATGGGGGCCATCCTAATGACT---GATTGTCTTACGACT----AGTACTATGTTGT---------ATTCTATT---CATGTAATAAAAATCCTT-----------------------------------------------------------------------GGAATTCTAAAATACTA--------------------TTGGGCG----------TGAATCATATTGAAAA-CTTG------------------------------------------AATTATGTTGTGGGTCCA------AGCAAT----GAGTAAACA-TTGATTTATT-------GAGCCCATT-AAAATGC-AAAATTA-----------------TTTATTATTTTTATGTCACTA------AATACTTATTATCT-CAATATTTTTTTTATTATTC-AATAGTTATTGCAATACAACGGATAATTTAGTTGTTGCAATACAACGGATAATTTTTTTTTATTTTTTAGTAGATGATCAGACGAGGATAAAGGTAGAGTCCGGTTTTTAGTGCTGATCTCAGCAACGATGCGAATCGTAGTAAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Huperzia_selago GACTTG---ATTGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCGGGGAAACCTTAGTAGAAGGGGTAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGCGG----GGGATAGGTGCAGAGACTCGATGGGGGCCATCCTAATGACT---GATTGTCTTCCGACT----AATACTGTGTTGT---------ATCATATT---CATGTAATAAA--TCCTT-----------------------------------------------------------------------GGAGTTC-AAAATACTA--------------------TTGGGCG----------TGAATCATATTGAAAAACTTG------------------------------------------AATTATGTTGTGGGTCCA------ACCAAT----GAGTAGACACTTGATT-----------GAGCCCATTCAAAATGC-AAAATTA-----------------TTTATTATTTTTCTGTCACTA------AGTAATTATTATCT-CAATATTTTTTTTATTCTTC-AGTAGTTACTGCAATACAACGGATAAGTT------------------------------------TTTAGTAGATGATCAGACGAGGATAAAGGTAGAGTCCGGTTTTTAGTGCTGATCCCAGCAACGATGCGAATCGTAGTAAAAAGAAGATTCGTTGGCTTTATAAACCGTGAG Lycopodiella_alopecuroides GACTTG---AATGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTGGAAGAGGTAGGTAATCCTGAGCCAAATCCT----GT-----TGAGCGAGTGGCGGCAGCGGGATAGGTGCAGAGACTCGATGGGAGCCATCCCAATGAAT---GATCTTCTTACGACC----AATAC--TCTTTT--ATTGTTCATAATATT---CATGTAATAAA--TTATTTATTAAAATAAATAAAAA-----TTATTTGAATATTTTGTTTAATCCATTATTTATAAGAATG----GGAGGGAATTC-CAAATACTATTGGACGTGATTCATACTAAGTGGACA----------TAATTCATACTATAAAGCTTG------------------------------------------AATTATACTATGGGTCCAATTGATACTGAT----GAAGAGGAACTT--------ACTCGTTGAGCTAATTCG---TTAAAAAATTA-----------------TTTATTATTT-----TAACTT------AGTAGTTGGTATAT-CAATAATTTATTCCT------AGTAGTCATTACAATACAACGGATAAGTT------------------------------------TTTAGTAGATGATTGGACGGGGATAAAGAGAGAGTCCAATTTTTAGCGCTGACTCCAGCAACAATGTGAATCGTAATTAAAAGAAAATTCGTTGGCTTTATAAACCGTGAA Lycopodiella_caroliniana GACTTA---AATGAATTGAGCTTTAGTTTAGGAACTTATTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTGGAAGGGATAGGTAATCCTGAACCAAATCCT----GT-----TGAGTAAATATCGGCAACGGGATAGGTGCAGAGACTCGATGGGAGCCATCCCAATGAA-AATGATCTTCTTACGACC----AATAC--TGTTTT--ATTGTTCATAAAATT---AATATAATCAA--TTCTAAAAAAAAAA--------------TGAGTTAAATCTTTTTTTAATCCCATAACTTATAAAAATG----GTAGGGAATTG-AAAATATTATTAGATGTAATTCATACTAAGTGGACG----------TGATTCATACTAAAAACCTTG---AATCATATTAAGTGGATGTGATTGATACTAAAAACTTTTAATTATACTACGGATCCAATTGATATTAAT----GAGGAAGTGTTGCAT-----ACTCGTCGAGTCAATTTG---TTAAAAAATTCTTTATTAATTGTCACTATTTATTACTT----GTCACTT------AGTAGTTGGTATAT-CAATAAATTATTTCT------AGTAGTTATTACAATACAACATAGAAGTT------------------------------------TTTAGTAGATGATTAGACAGGGATAAAGAGAGAGTCCGGTTTTTAATGCTGATTCCAGCAACAATGTGAATCGTAGTGAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodiella_cernua GACTTA---AATAAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAATGGAAGAAGTAGGTGATCCTGAGCCAAATCCC----GT-----TAAGCAAATAG-GGCAGCAGGATAGGTGCAGAGACTCGATGGGAGCCATCC-AATGAAC---GATCTTCTTACG-CC----AATAC--TCTTTTT-ATTGTTCATAATATT---CATGTAATAAT--TTTTTAATAAAAAAAC------------TTATTTGAATATTTTGTTTAGTCCATTACTTATAAAATTG----GGAAGGAATTA-GAAATACTATTGAGCATAATTAAAATTAAGTAAACG----------TAATTCATACTAAAGAACTTG------------------------------------------AATTATACTGTGAATTCAATCGATACTGAT----GGGAAGGGAGAT--------ACTTGCCAAGCCAATTTG---TTTAAAT-TTA-----------------TTGATTATTT----GTCACTT------AGTAGTTGATATAA-CAATAATCTATTCCT------AGTAGTTAATACAATACAACGGAGAAGTT------------------------------------TTTAGTAAATGATTGGACAGGGATAAAGGGAGAGTCCGGTTCTTAGTGCTGATCCCAGCAACAATGTGAATCGTAGTTAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodiella_glaucescens -----------------GAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAGCCTTAATGGAAGAAGTAGGTGATCCTGAGCCAAATCCC----GC-----TAAGCAAATAG-GGCAGCAGGATAGGTGCAGAGACTCGATGGGAGCCATCCCAATGAAC---GATCTTCTTACG-CC----AATAC--TCTTTTT-ATTGTTCATAATATT---CATGTAATAAA--TTTTTAATAAAAAAAC------------TTATTTGAATATTTTGTTTAGTCCATTACTTATAAAATTG----GGAAGGAATTA-GAAATACTATTGAGCATAATTCAATTTAAGTAAACG----------TAATTCATACTAAAGAACTTG------------------------------------------AATTATACTGTGAATTCAATCGATACTGAT----GGGAAGGGAGAT--------ACTTGCCAAGCCAATTTG---TTTAAAT-TTA-----------------TTGATTATTT----GTCACTT------AGTAGTTGATATAG-CAATAATCTATTCCT------AGTAGTTAATACAATAC?ACGGAGAAGTT------------------------------------TTTAGTAGATGATTGGACAGGGATAAAGGGAGAGTCCGGTTCTTAGTGCTGATCCTAGCAACAATGTGAATCGTAGTTAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodiella_inundata GACTTG---AATGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTGGAAGAGGTAGGTAATCCTGAGCCAAATCCT----GT-----TGAGCGAGTGGCGGCAGCGGGATAGGTGCAGAGACTCGATGGGAGCCATCCCAATGAAT---GATCTTCTTACGACC----AATAC--TCTTTT--ATTGTTCATAATATT---CATGTAATAAA--TTATTTATTAAAATAAATAAAAA-----TTCTTTGAATATTTTGTTTAATCCATTATTTATAAGAATG----GGAGGGAATTC-CAAATACTATTGGACGTGATTCATACTAAGTGGACA----------TAATTCATACTATAAAGCTTG------------------------------------------AATTATACTATGGGTCCAATTGATACTGAT----GAAGAGGAACTT--------ACTCGTTGAGCTAATTCG---TTAAAAAATTA-----------------TTTATTATTT-----TAACTT------AGTAGTTGGTATAT-CAATAATTTATTCCT------AGTAGTCATTACAATACAACGGATAAGTT------------------------------------TTTAGTAGATGATTGGACGGGGATAAAGAGAGAGTCCAATTTTTAGCGCTGACTCCAGCAACAATGTGAATCGTAATTAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodiella_lateralis GACTTATTAAATGAATTGAGCCTTAGTTTAAGAACTTACTAAGTGATAGCTCTCAGATTCAGGGAAACCTTAATGGAAGGGGTAGGTAATCCTGAGCCAAATCCTGCCTCT-----TAAGCAAGTGACGGCAGCGGGATAGGTGCAGAGACTCGATGGGAGCCATCCCAATGAAC---GATCTCCTTACGACC----AATAC--TTTTTTTCATTGTTCATAATATT---CATATAATAAA--TCCTTCATTATAAAAAAAA---------TCATTTTAATATTTTGTTTAATTCATTACTTATAATAATG----GGAAGGAATTA-GAAATACTATTGGACGTGACTCATACTAAGTAGACG----------TAATTTATACTAAAGGATTTGTTG---------------------------------------AATCATACTATGAGTCCGATTGATACTAAC----GAGTAGG-------------ACTCGTCGAGCCGATT--------AAAAATTA---------------------TTATTT----GTCACTTAGTAGTAGTAGTTGGTATAT-TAATAATTTATTTCT------AGTGGTTATTACA---CAACGGATAAGTT------------------------------------TTTAGTAGATGATTGTACAGGGATAAAGAGAGAGTCCGGTTTTTAGTGCTGATTCTAGCAACAATGTGAATCGTAGTTAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodiella_pendulina GACTTA---AATGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAGCCTTAATGGAAGAAGTAGGTGATCCTGAGCCAAATCCC----GC-----TAAGCAAATAG-GGCAGCAGGATAGGTGCAGAGACTCGATGGGAGCCATCCCAATGAAC---GATCTTCTTACG-CC----AATAC--TCTTTTT-ATTGTTCATAATATT---CATGTAATAAA--TTTTTAATAAAAAAAC------------TTATTTGAATATTTTGTTTAGTCCATTACTTATAAAATTG----GGAAGGAATTA-GAAATACTATTGAGCATAATTCAATTTAAGTAAACG----------TAATTCATACTAAAGAACTTG------------------------------------------AATTATACTGTGAATTCAATCGATACTGAT----GGGAAGGGAGAT--------ACTTGCCAAGCCAATTTG---TTTAAAT-TTA-----------------TTGATTATTT----GTCACTT------AGTAGTTGATATAG-CAATAATCTATTCCT------AGTAGTTAATACAATACAACGGAGAAGTT------------------------------------TTTAGTAGATGATTGGACAGGGATAAAGGGAGAGTCCGGTTCTTAGTGCTGATCCTAGCAACAATGTGAATCGTAGTTAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodium_alpinum GACTTG---ATTGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTCTCAAATTCAGGGAAACCTTAGTGGAAGGAATAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGC------GGGATAGGTGCAGAGACTCGATGGGAGCCATCCTAATGAAT---GATCTTCTTCCGACC----AATAC--TGTTGT---------ATCATATT---CATTTAATAAA--TTCTTCATAAGAAAAAAAAA--------CTCTGTGAATATTATATTTAATCCATTCCTTATAAGAAAG----------AATTA-GAAATATTA--------------------TTGGATG----------TAAATCATACTAAACAACTTG------------------------------------------AATCATTTTATGGGTCCG------ACTAAT----AAGGAGATACTT---------------GAGCCAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCACTT------AGTAGTTAGTATATACAATAATTCTTGAT-------AGTAGTTATTACAATACAACGGATAAGTT------------------------------------TTTAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGGTTTTCAGTGCTGATCCCAGCAACAATGTGAATCGTAGTTAAAAGAAAATTCGTTGGCTTTATAGAACGTGAG Lycopodium_annotinum ---TTG---ATTGAATTGAGC-TTAGTTTACGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTAGAAGGAATAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGC------GGGATAGGTGCAGAGACTCGATGGAAGCCATCCTAATGAAT---GATCTTCTTCCGACC----AATAC--TGTTGT---------ATCATATT---CATGTAATAAA--TTCTTCATAAAAAAAAAAAAA-------CTCTGTGAATATTATGTTTAATCCATTCCTTATAAGAAAG----------AATTA-TAAATACTA--------------------TTGGATG----------TAAATCGTACTAAACAACTTG------------------------------------------AATCATTTTATGGGTCCG------ACTAAT----AAGGAGATACTT---------------GAGCAAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCACTT------AGTAGTTAGTATAT-CAATAATTTTTTTT-------AGTAGTTATTACAATACAACGAATAAGTT------------------------------------TTAAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGGTTTTCAGTGCTGATCTCAGCAACAATGTGAATCGTAGTTAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodium_casuarinoides GACTTG---ACTGATTTGAGCCTTAGTTTAGGAACTGACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTAGAAGAAATAGGCGATCCTGAGCCAAATCCT----GTTTAGTTTAGCAAAAGAC------AGGATAGGTGCAGAGACTCGATGGGAGCTATCCTAATGAATAATGATCTTATTACAACC----AATAC--TGTTGT---------ATAATATT---GACGTAAGAAA--TTATTAATATAAAAAA------------CTCTGTGAATAGTATATTTAATCCATTTATTATAAGAAAGAAAT------AATTA-AACATACTA--------------------TTGTATG----------TAAATCATACTAAAGAACGTA------------------------------------------AATCATTTTATAGGTGCA------AATAAT----AAGGATATACTT---------------GATCCAATTAAAAATTAAAAAATGC-----------------TTTATTATTT----GTTACTT------ATTATTTAGTATAT----TAATTTTTTTT-------AGTAATTATTACAATACAACAGATAAGCT------------------------------------TTGATTAGATGATTAAACAAGGATAAAGATAGAGTCCAGTTTTCAGTGCTGATCGCAGCAACAATGTGAATAGTAGTAAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodium_clavatum GACTTG---ATTGAATTGAGCCTTAGTTTAGGAAC?TACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTAGAAGGAATAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGC------GGGATAGGTGCAGAGACTCGATGGGAGCCATCCTAATGAAT---GATCTTCTTCCGACC----AATGC--TGTTGT---------ATCATATT---CATGTAATAAA--TTCTTCAAAAAAAAAAAA----------CTCTGTGAATATTATGTTTAATCCATTCCTTATAAGAAAG----------AATTA-AAA-TACTA--------------------TTGAATG----------TAAATCATACTAAACAACTTG------------------------------------------AATCATTTTCTGGGTCCA------ACTAAT----AAGGAGATACTT---------------GAGCCAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCACTT------AGTAGTTAGTATAT-GAATAATTTTTTTTT------AGTAGTTATTACAATACAACGGATAAGTT------------------------------------TTAAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGGTTTTCAGTGCTGATCCCAGCAACAATGTGAATCGTAGTTAAAAGAAAATCCGTTGGCTTTATAGACCGTGAG Lycopodium_deuterodensum GACTTG---ATTGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTAGAAGGAATAGGCAATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGC------GGGATAGGTGCAGAGACTCGATGGGAGCCATCCTAATGAAT---GATCTTCTTCCGACC----AATAC--TGTTGT---------ATCATATT---CATGTAATAAA--TTATTCATAAAAAAAA------------CTCTGTGAATATTATGTTTAATCCATTTCTTATAAGAAAG----------AATTA-AAAATACTA--------------------TTGTATG-------TAATAAATCATACTAAACAATTTG------------------------------------------AATCATGTTAGGGGTCCA------ACTAAT----AAGGAGATATTT---------------GAGCCAATTCAAAATTTTAAAATTA-----------------TTTATTATTT----GTCACTT------AGTAGTTAGTATAT-CAATAATTTTTTTTTA-----AGTAGTTATTACAATACAACAGATAAGTT------------------------------------TTTAGTAGATGATTAGACGAGGATAAAGATAGAGTCCAGTTTTCAGTGCTGATCCCAGCAACAATGTGAATCGTAGTAAA??????????????????????????????? Lycopodium_fastigiatum GAATTG---ATTGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTGGAAGGAATAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAGTGGC------GGGATAGGTGCAGAGACTCGATGGGAGCCATCCTAATGAAT---GATCCTCTTCCGACC----AATAT--TGTTGT---------ATCATATT---CATGTAATAAA--TTCTTCATAAAGAAAAAAAAAAAAAAAACTCTGTGAATATTCTATTTAATCCATTTCTTATAAGAAAG----------AATTA-AAAATACTA--------------------TTGTATG-------TAATAAATAATACTAAACGATTTG------------------------------------------AATCATGTTATAGGTCCG------ACTAAT----AAGGAGATACTCCTTAT----------GAGTCAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCACTT------AGTAGTTAGTATAT-CAATAATTTTTTTA-------AGTAGTTATTACAATACAACAGATAAGTT------------------------------------TTTAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGGTTTTCAGTGCTGATCCTAGCAACAATGTGAATAGTAGTAAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodium_jussiaei ---TTG---ATTGAATTGAGC-TTAGTTTAGGAACTTACTAAATGATAGCTTTCAAATTCAGGGGAACCTTAGTGGAAGGAACAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGCGG--GCGGGATAGGTGCAGAGACTCGATGGAAGCCATCCTAATGAAT---GATCTTCTTCCGACC----AATAC--TGTTGT---------ATAATATT---CATGTAATAAA--TTATTCATAAAAAAAAAAAAAAAAA---CTCTGTGAATATTATGTTTAATCTATTCCTTATAAGAAAG----------AATTA-GAAATACTA--------------------TTGGATG----------TAAATCATACTAGACAATTTG------------------------------------------AATCATGTTATGGGTCCG------ACTAATTGATAAGGAGATACTT---------------GAGCCAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCAATT------AGTAGTTAGTATAT-CAATAATTTTAAAA-------AATAGTTATTACAATACAACGGATAAGTT------------------------------------TTTAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGATTTTCAGTGCTGATCCCAGCAACAATGTGAATCGTAGTAAAAAGAAAATTCGTTGGCTTTATAAACCGTGAG Lycopodium_magellanicum GACTTG---ATTGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTGGAAGGAATAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAGTGGC------GGGATAGGTGCAGAGACTCGATGGGAGCCATCCTAATGAAT---GATCCTCTTCCGACC----AATAT--TGTTGT---------ATCATATT---CATGTAATAAA--TTCTTCATAAAGAAAAAAAAAAAAAAA-CTCTGTGAATATTCTATTTAATCCATTTCTTATAAGAAAG----------AATTA-AAAATACTA--------------------TTGTATG-------TAATAAATAATACTAAACGATTTG------------------------------------------AATCATGTTATAGGTCCG------ACTAAT----AAGGAGATACTCCTTAT----------GAGTCAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCACTT------AGTAGTTAGTATAT-CAATAATTTTTTTA-------AGTAGTTATTACAATACAACAGATAAGTT------------------------------------TTTAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGGTTTTCAGTGCTGATCCTAGCAACAATGTGAATAGTAGTAAAAAGAAAATTCGTTGGCTTTATAAACCGTGAG Lycopodium_obscurum -------------------------------GAACTTACTAAATGATAGCTTTCAAATTCAGGGAAACCTTAGTAGAAGGAATAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGC------GGGATAGGTGCAGAGACTCGATGGGAGCCATCCTAATGAAT---AATCTTCTTCCGACC----AATAC--TGTTGT---------ATAATATT---CATGTAATAAA--TTATTCATAAAAAAAAAAAAAAAAAAA-CTCTGTGGATATTATGTTTAATCCATTCCTTATAAGAAAG----------AATTA-GAAATACTA--------------------TTGGATG----------TAAATCATACTAAACAATTTG------------------------------------------AATCATGTTATGGGTCCG------ACTAATTAATAAGGAGATACTT---------------GAGCCAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCAATT------AGTAGTTAGTATAT-CAATAATTTTTTCA-------AGTAGTTATTACAATACAACGGATAAGTT------------------------------------TTTAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGGTTTTCAGTGCTGATCCCAGCAACAATGTGAATCGTAGTAAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodium_scariosum GACTTG---ATTGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGGAACCTTAGTAAAAGGAACAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGCGG--GCGGGATAGGTGCAGAGACTCGATGGAAGCCATCCTAATGAAT---GATCTTCTTCTGACC----AATAC--TGTTGT---------ATAATATT---CATGTAATAAA--TTATTCATTAAAAAAAAA----------ATCTGTGAATATTATGTTTAATCTATTCCTTATAAGAAAG----------AATTA-TAAATACTA--------------------TTGGATG----------TAAATCATACTAGACAATTTG------------------------------------------AATCATGTTATGGGTCCG------ACTAATTGATGAGGAGATACTT---------------GAGCCAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCAATT------AGTAGTTAGTATAT-CAATAATTTTTTGTA------AATAGTTATTACAATACAACGGATAAGTT------------------------------------TTTAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGATTTTCAGTGCTGATCCCAGCAACAATGTGAATCGTAGTAAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodium_vestitum GAATTG---ATTGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTAGAAGGAATAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGC------GGGATAGGTGCAGAGACTCGATGGGAGCCATCCTAATGAAT---GATCTTCTTCCGACC----AATGC--TGTTGT---------ATCATATT---CATGTAATAAA--TTCTTCAAAAAAAAAAA-----------CTCTGTGAATATTATGTTTAATCCATTCCTTATAAGAAAG----------AATTA-GAA-TACTA--------------------TTGAATG----------TAAATCATACTAAACAACTTG------------------------------------------AATCATTTTATGGGTCCA------ACTAAT----AAGGAGATACTT---------------GAGCCAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCACTT------AGTAGTTAGTTTAT-GAATAATTTTTTTTT------AGTAGTTATTACAATACAACGGATAAGTT------------------------------------TTAAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGGTTTTCAGTGCTGATCCCAGCAACAATGTGAATCGTAGTTAAAAGAAAATCCGTTGGCTTTATAGACCGTGAG Lycopodium_volubile GACTTG---ATTGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTTTCAGATTCAGGGAAACCTTAGTAGAAGGAATAGGTGATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGC------GGGATAGGTGCAGAGACTCGATGGGAGCCATCCTAATGAAT---GATCTTCTTCCGACC----AATAT--TGTTGT---------ATCATATT---CATGTAATAAA--TTCTTCATAAAAAAAAA-----------CTTTGTGAATATTATGTTTAATCCATTTCTTATAAGAAAG----------AATTA-AAAATACTA--------------------TTGTATT-------TAATAAATAATACTAAACAATTTG------------------------------------------AATCATGTTATAGGTCCG------ACTAAT----AAGGAGATACTT---------------GAGCCAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCACTT------AGTAGTTAGTATAT-CAATAATTTTTTTA-------AGTAGTTATTACAATACAACAGATAAGTT------------------------------------TTTAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGGTTTTCAGTGCTGATCCTAGCAACAATGTGAATAGTAGTAAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG Lycopodium_wightianum GACTTG---ATTGAATTGAGCCTTAGTTTAGGAACTTACTAAATGATAGCTCTCAAATTCAGGGAAACCTTAGTGGAAAGAATAGGCGATCCTGAGCCAAATCCT----GT-----TTAGCAAATGGC------GGGATAGGTGCAGAGACTCGATGGGAGCCATCCTAATGAAT---GATCTTCTTCCGACC----AATAC--TGTTGT---------ATCATATT---CATTTAATAAA--TTCTTCATAAGAAAAAAAAAA-------CTCTGTGAATATTATATTTAATCCATTCCTTATAAGAAAG----------AATTA-GAAATATTA--------------------TTGGATG----------TAAATCATACTAAACAACTTG------------------------------------------AATCATTTTATGGGTCCG------ACTAAT----AAGGAGATACTT---------------GAGCCAATTCAAAATTCGAAAATTA-----------------TTTATTATTT----GTCACTT------AGTAGTTAGTATATACAATAATTCTTGAT-------AGTAGTTATTACAATACAACGGATAAGTT------------------------------------TTTAGTAGATGATTAGACGAGGATAAAGATAGAGTCCGGTTTTCAGTGCTGATCCCAGCAACAATGTGAATCGTAGTTAAAAGAAAATTCGTTGGCTTTATAAACCGTGAG Phylloglossum GACTTG---ATTTAATTGAGCTTTAGTTTGGAAACTTACTGAGTGATAGCTTTCATATTCGGGGAAACCTTAGTAGAAGGGGTAGGCGATCCTGAGCCAAATCCTTCCTGT-----CTATAAAATGGCAA----AGGATAGGTGCAGAGACTCGATGGGGGCCATCCTAGTGACT---AATTGTCTTCCAACTAACTAATACTGTGTTGT---------ATCATATT---CATGT---AAA--TCCTT-----------------------------------------------------------------------GTAGTTC-AAAAGACTA--------------------TTGGTAGGCAGCA----TAAACCATATTGAAAAACTTA------------------------------------------AATTATGCTGTGGGTCC-----------------AAGTAGACACTTGATC-----------GAGTCCATTCAAAATGC-AAAATCA-----------------TTTATTATTTTTATGTCACTA------GGTAATTATTATCT-AAATATTTTTTATATTCCTC-AGTAGTTATTGCAATACAATGGATAAGTT------------------------------------TATAGTAGGTGATTAG-CGAGGATAAAGGTAGAGTCCAGTTTTCAGTGCTGATCCCAGCAACGATGTGAATCGTAGTAAAAAGAAAATTCGTTGGCTTTATAGACCGTGAG ; END; [ The following blocks are output data for analysis step 1071 ] BEGIN TREES; TITLE Tb5847; LINK TAXA = TaxaForAnalysisStep1071; TREE Fig_1 = [&R] (((Huperzia_hippuridea,Huperzia_campiana),Huperzia_selago,Phylloglossum)'Huperzia-Phylloglossum',((((((Lycopodium_magellanicum,Lycopodium_fastigiatum)Sect._Magellanica,Lycopodium_volubile),(((Lycopodium_alpinum,Lycopodium_wightianum)Sect._Complanata,(Lycopodium_annotinum,(Lycopodium_clavatum,Lycopodium_vestitum)Sect._Lycopodium)),(Lycopodium_obscurum,(Lycopodium_jussiaei,Lycopodium_scariosum)Sect._Diphasium))),Lycopodium_deuterodensum),Lycopodium_casuarinoides)Lycopodium,((Lycopodiella_alopecuroides,Lycopodiella_inundata)Sect._Lycopodiella,(((Lycopodiella_cernua,(Lycopodiella_glaucescens,Lycopodiella_pendulina))Sect._Campylostachys,Lycopodiella_lateralis),Lycopodiella_caroliniana))Lycopodiella)); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr5540] END;