#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 31, 2025; 21:17 GMT TreeBASE (cc) 1994-2008 Study reference: Shivas R.G., Tan Y., & Grice K.R. 2013. Phyllosticta spp. on orchids (Orchidaceae), introducing Phyllosticta speewahensis (Phyllostictaceae, Ascomycota) from northern Australia. Sydowia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S14213] [ The following blocks are input data for analysis step 11433 ] BEGIN TAXA; TITLE TaxaForAnalysisStep11433; DIMENSIONS NTAX=17; TAXLABELS Diaporthe_gulyae_BRIP58044 Guignardia_bidwellii_CBS111645 Guignardia_gaultheriae_CBS477_70 Phyllosticta_bifrenariae_CBS128855 Phyllosticta_brazilieniae_CBS126270 Phyllosticta_capitalensis_CBS128856 Phyllosticta_citriasiana_CBS120486 Phyllosticta_citribraziliensis_CBS100098 Phyllosticta_citricarpa_CBS127454 Phyllosticta_citrichinaensis_CBS130529 Phyllosticta_hostae_CGMCC3_14986 Phyllosticta_hubiensis_CGMCC3_14986 Phyllosticta_ilicis_aquifolii_CGMCC3_14358 Phyllosticta_kerriae_MAFF240047 Phyllosticta_schimae_CGMCC3_14354 Phyllosticta_speewahensis_BRIP58044 Phyllosticta_styracicola_CGMCC3_14985 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M17022] TITLE Phyllosticta_spp._on_orchids; LINK TAXA = TaxaForAnalysisStep11433; DIMENSIONS NCHAR=794; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=- GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Diaporthe_gulyae_BRIP58044 CTGGAA----------------------------------------------CGCGCCTCGGCGCACCCAGAAAC--------------CCTTTGTGAACTTATACCCATACTGTTGCCTCGGCGCAGGCCGGCCT-TTTTCGACAAAGGC--------CCCCTGG-----------AGACAGGGAGCAGCCCG---------CCGGCGGCCAACCAAAC-TC---TGTTTCTATAGTGAATCTCTGAGTAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGCTGCTTGGT-ATTGGGCGACGTCCGCTGCCGGACGCGCCTGGAAGACC-TCGGCGACGGCGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCTGGCTTGGTGATGGGGCACTGCCTGTGAAAGGGCAGGCCCTGAAATCTAGTGGCGAGCTC---GTAGTAGTAACAT-TCTCGCTTTGGAGGA-CTGGGCGTTGGC-CGCCGGACAATC----------GCCCAC-TCGCTTCGCCGCCAGGACCCCGAGC---GTAGTAGTT--ACATCTCGCTCTGGAAGGCCCTGGCGGTGCCCTGCCGTTAAACC----------GCCATTTTCACCCCTCC-------CATCTCT-----TGGTG--GGGTCGG--GCTGCGCT----AA Guignardia_bidwellii_CBS111645 CTGAAATTGGTAA----TTCTCGAAAGGATCGAGTACGCCC----GGC----CGTCAAAAGCCGGGCCGAAAGAGC----CCTTCTCA-CCCTTGTGTAC---GTAGTAGTA--ACATCTCGCTTTGGAGCG-CCGGGCGACGGC-CGCCGGACAACC----------GCCGCC-TCGCC-----CTTTTGCGCGTTCGGCAACATTGCCTA-AAGCGGCC--GT------CATTTTT-----TGGTG--GGGTCGG--GCTGCGCT----AAGCTGCTTTGGTGCGTTCGGCAACATCGCCCA-AAGCAGCA--TT----------------CCTGCGCA-CCA----CTTCACTTTG-----GTCGGAC--------AA--CATTTTGCT--AAACCTCTCTCAGGA----CTTCACATCA-----GTCGCAA------------CATTCTGCT--AACGCCCTCGCAGGA---GTCGCATCGCAACGCAA--CACTCTGCT--AACGCCCTCGCAGGACCTCGCCTCG-----GTCGCATCGCAACGCAA--CACTTTGCT--AACGCCCTCGCAGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Guignardia_gaultheriae_CBS477_70 CTGAAC-TAGTAA----TTCTCTGAAAGGTCGCCGGTACCC----GGTCCCCCCTAAACAAGGGGGCCGGGGAAGGTC--CTCTCACA-CCCTTGTGTAC-----CCTACCACGTTGCTTTGGCG--GGCCGACCCGGTTTCGACCCGGGCGGCCGGCGCCCCCAGCCCTC--G-CGGGGCCAGGA--CGCCGGGCCAAG-----TCTACCATGTTGCTTTGGCG--GGCCGACCCGGTTTTGACCCGGGCGGTCGGCGCCCCCAGCCTAGTCT-CTAGGCCAGGA--CGCCTGGCTAAG-----CTTACCATGTTGCTTTGGCG--GGCCGACCCGGTTTCGACCCGGGCGGCCGGCGCCCCCAGCCCTC----ACCGGCCAGGA--CGTCAGGCTAAGCGCCCGCCAGTATACAAAAC-TCAAGCGATTATCTTGTGAAGTCCTGACGTTATCAT-TCAATTGATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGTGCCCGCCAGTATACAAAAC-TCCAGCGATTATTCTGTGTAGTCCTGAGAAT-TCAT-TTAATGAAATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCGCCCGCCAGTATACAAAAC-TCCAGCGATTATTTCGTGCAGTTCTGATAAA-TTAT-TCAATTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGC Phyllosticta_bifrenariae_CBS128855 CTGAAA-ATGTAA--TCATTCTAAGGAGACTTGCGGGTGGGCTTCGGCCCCCTGCATC----------------------CCTTACCA-CCCTTGTGTA-GTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCCGCTGTCAGACGCGCCTGGAAGACC-TCGGCGACGGCGTCTCAGCCTCGAGC---GTAGTAGTAAAATATCTCGCTTTGGAGGA-GGGGACGACGGC-CGCCGGACAATC----------GCCGTC-TCGCT--------GTAGTAGTAAAATATCTCGCTTTGGAGGG-TGGGGTGGCGGCTTGCCGGACAACC----------GCCCAC-TCGCTTCGCCCGAGGGG-------CATTTTT-----TGGTG--GGGTCGG--GCTGCGCT----AGGCTGCTTTGGCGC--TCGGTTACATGACCCG-ATGCAGCA-TTTCGAGGCG-------CATTTTT-----TGGTG--GGGTCGG--GCTGCGCT----AAGCTGCTTTGGTGCGTTCGGCAACATCGCCCA-AAGCAGCA--TTGTTGCGCCCGACGGTCGTCCTGCGCACTCA----CCTCA-TTCG-----GTCGCAC-------AAA--CTTTTTGCT--AACGCCCTCGCAGGA------------------CCTGCGCA-CCA----CTTCACTTTG-----GTCGCAC--------AA--CATTTTGCT--AACGCCCTCCCAGGA----------------------------------------- Phyllosticta_brazilieniae_CBS126270 CTGAAT-TAGTAA---TTCTACCAAAGGACCTCTAGTACCG----GGGCCCCCGTAAAAAGGGACCGCGGGAACGGGA--CTCCGACACCCCATGTGTACCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGCCTCAGCCTCGAGC---GTAGTAGTA--ACATCTCGCTTTGGAGGA-CTGGGTGCTGGC-CGCCGGACAACC----------GCCGTC-TCGCT-----GTCTCGGCCTCGAGC---GTAGTAGTAAAACATCTCGCTTTGGAGTG-CTGGGCGACGGCTTGCCGGACAACC----------GCCGCC-TCGCC-----CGAGGGG-------CATTTTT-----TGGTG--GGGTCGG--GCTGCGCT----AGGCTGCTTTGGCGC--TCGGTTACATGACCCG-ATGCAGCA-TTTCGAGGGG-------CATTTTT-----TGGTG--GGGTCGG--GTTGCGCT----AGGCTGCTTTGGCGC--TCGGTTACATGGCCCG-ATGCAGCA-TTTGTTGCGCCCGACGGTCGTCCTGCGCACTCA----CCTCA-TTCG-----GTCGCAC-------AAA--CTTTTTGCT--AACGCCCTCGCAGGATGCGCACGCA----CTTCACATCA-----GTCGCAA------------CATTCTGCT--AACGCCCTCGCAGGA------------------CCTGCGCA Phyllosticta_capitalensis_CBS128856 CTGAAATGTAATAACTTCTATTGAAAGGTTCCAGAGTAGG------------CGCTACAA----CGCCGAAATGA-----CCTTCTCA-CCCTTGTGTA-CATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCCGCTGCCGGACGCGCCTCGAAGACC-TCGGCGACGGCGTCCTAGCCTCGAGC---GTAGTAGTAAAATATCTCGCTTTGGAGTG-CTGGGCGACGGC-CGCCGGACAATC----------GCCCAC-TCGCT-----GCCTCAGCCTCGAGCGTAGTAGTAGTAACATATCTCGCTTTGGAGCG-CTGGGCGACGGC-CGCCGGACAACC----------GCCGCC-TCGCC-----CGAGGGG-------CATTTTC-----TGGTG--GGGTCGG--GCTGCGCT----AAGCTGCTTTGGCGC--TCGGTTATATGACCCG-ATGCAGCATTTTCGAGGGG-------CATTTTT-----TGGTG--GGGTCGG--GTTGCGCT----AGGCTGCTTTGGCGC--TCGGTTACATGGCCCG-ATGCAGCA-TTTTTTGCGCCCGACCG Phyllosticta_citriasiana_CBS120486 CTGAAATACGTAA-----TCCTGAAAGGTAATGGAAGGGGA----GGC----CGTAAAAAAGCCGCCCAACCTA------CCTTCACA-CCCTTGTGTA-CATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCTGCTGTCAGACGCGCCTGGAAGACC-TCGGCGACGGCGTCTCAGCCTCGAGC---GTAGTAGTAAAATATCTCGCTTTGGAGGAGGGAGGCGCTGGC-CGCCGGACAATC----------GCCCAC-TCGCT-----GTTCCAGCCTCGAGC---GTAGTAGTGAAATATCTCGCTTTGGAGGA-GGGGGCGACGGCTTGCCTGACAACC----------GCCCAC-TCGTCTCGTCTGAGGGG-------CATTTTTTTGGGTGGTG--GGGTCGGGCGCTGCGCT----AAGCTGCTTTGGCGCGTTCGGCAACATCGCCCA-AAGCAGC-----TGCTCA--------CCTCACCTCG-----GTCGCATCGCAGCGAAA--AATTCCGCT--AACGCCCTCGCAGGATGCGCA-TCACCCGCTTCACTTTGTGATCGTCG--C--------AA--CATTCAGCT--AACGCCCTCGCAGGA--------CCACTTGT-----GTCGCAC--------AA--CATTTT Phyllosticta_citribraziliensis_CBS100098 CTGAAA-ATGTAA--TAAACCCTTCAGGTTTTGGAAGGGGG----AGC----CGTCAAAAGCTCCCCTGGTACAT-----GCCTCAC--CCCTTGTATA-CATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCCGCTGCCGGACGCGCCTCGAAGACC-TCGGCGACGGCATTCCAGCCTCGAGC---GTAGTAGTAAAATATCTCGCTTTGGAGGA-TGGGGTGACGGCTTGCCGGACAACC----------GCCCAC-TCGCT------------CATTTTC-----TGGTG--GGGTCGG--GCTGCGCT----AAGCTGCTTTGGCGC--TCGGTTATATGACCCG-ATGCAGCATTTTTGAGGGG-------CATTTTT-TGGGTGGTG--GGGTCGGGCGCTGCGCT----AAGCTGCTTTGGCGCGTTCGGCAACATCGCCCA-AAGCAGC-----TTTGCGCCCGACCGACACTCTGCTCA--------CCTCACCTCG-----GTCGCATCGCAGCGAAA--AATTCCGCT--AACGCCCTCGCAGGATTTGCGCCCGGCCATGGTCCTGCGCA-TCACCCGCTTCACTTTGTGATCGTCG--C--------AA--CATTCAGCT--AACGCCCTCGCAGGA--AACGCCCTCCC Phyllosticta_citricarpa_CBS127454 CTGAAATACGTAA------TCCTGAAAGGTGATGGAAGGGA----GGC----CTTAAAAAAGCCGCCCGACCTA------CCTTCACA-CCCTTGTGTA-GTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCCGCCGTCGGACGCGCCTCGAAGACC-TCGGCGACGGCGTCTCAGCCTCGAGC---GTAGTAGTAAAATATCTCGCTTTGGAGGAGGGGGGCGCTGGC-CGCCGGACAATC----------GCCCAC-TCGCT-----ACACCAACTCTACCACTTTGAACCCTATCAAACACCCTCCTGCCGAAAAGAACTGTCAAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phyllosticta_citrichinaensis_CBS130529 CTGAAA-ATGTAA--T-AACCCTCAAGGTTTTGGAAGGGAG----AGC----CGTCAAAAGCTCTCCTGGTACAT-----GCCTCACA-CCCTTGTGTA-GGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCCGCTA--GGACGCGCCTGGAAGACC-TCGGCGACGGCGTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCCGCTGCCGGACGCGCCTCGAAGACC-TCGGCGACGGCATTCCAGCCTCGAGC---GTAGTAGTAAAATATCTCGCTTTGGAGGA-TGGGGTGACGGCTTGCCGGACAACC----------GCCGTT-TCGCT------------CATTTTT-----GGGTGGTGGGTCGGGCGCTACGCT----AAGCTGCTTTGGCGCCTTCGGCAACATGGCCCA-AAGCAGC------------CATTTTT-----TGGTG--GGGTCGG--GCTGCGCT----AGGCTGCTTTGGCGCGTTCGGCAATATCGCCCG-AAGCAGCA--TT-------CATTTTT-----TGGTG--GGG----------CGCT----AAGCTGCTTTGGCGC--TCGGTTACATGGCCCG-ATGCAGCA-TTTTGCTCA--------CCTCACCTCG-----GTCGCATCGCAACGAAA--AATTTCGCT--AACGCCCTCGCAGGATGCTCA--------CCTCACCTCG-----GTCGCATCGCAACGCAA--CACTCTGCT--AA Phyllosticta_hostae_CGMCC3_14986 CTGAAA-ATGTAA--T-AACCTTAAAGGACCTAGAA-GGGG----AGC----CGTAAAAAAGCTCCCTGGACAGC-----CTTTCACA-CCCTTGTGTA------TCTACCCTGTTGCTTTGGCG--GGCCGACCCGGTTTTGACCCGGGCGGCCGGCGCCCCCAGCCCAG--CAATGGGCCAGGA--CGTCTG-CTAAG-----TCTACCATGTTGCTTTGGCG--GGCCGACCCGGTTTCGACCCGGGCGGCCGGCGCCCCCAGCCTAGTCTCCTAGGCCAGGA--CGCCCGGCTAAG-----TCTACCATGTTGCTTTGGCG--GGTCGACCCGGTTCCGACCCGGGCGGCCGGTGCCCCCAGCCTAGTCTTCTAGGCCAGGA--CGCCTGGCTAAGTGCCCGCCAGTATACAAAAC-TCTAGCGATTATTTTGTGTAGTCCTGAGAAT-TTAT-TCAATAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGTGCCCGCCAGTATACAAAAC-TCCAGCGATTATTTTGTGTAGTCCTGAGAAT-TTAT-TCAATAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGTGCCCGCCAGTATACAAAAC-TCCAGCGATTATTTTGTGTAGTCCTGAGAAT-TTAT-TCAATAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGTCATTAAAAC-CTCAAGCTCTGCTTGGT-ATTG Phyllosticta_hubiensis_CGMCC3_14986 CTGAACTTAGTAA------TTCTGAAAGGTAGCCGGTAAGG----GACCCCCCTAAACAAGGGGCCCCTGAAGGTC----CTCTCACACCCCTTGTGTAC-----CTTACCATGTTGCTTTGGCG--GGCCGACCCGGTTTCGACCCGGGCGGCCGGCGCCCCCAGCCCAG---ACTGGGCCAGGA--CGCCCGGCTAAG-----CTTACTGCGTTGCTTCGGCG--GGCCGACCCGGTTTCGACCCGGGCGGCCGGCGGTACCAGCCTCT----CGGGGCCAGGATGCGTCCGGTTACGCGCCCGCCAGTATACAAAACTTCCAGCGATTATTGGGTGCAGTCCTGATGAATTTAT-TCAATGAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGTGCCCGTCA--ATGGAAAAC-TCTAGCGATTATTTCATGCAGTCCTGATGAA-TTAT-TCAATTAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGCATTCCGGTCCGCTGCCGGACGCGCCTCGAAGACC-TCGGCGATGGCCTGCTTGGT-ATTGGGCGTCGTCTGCTGCCAGACGCGCCTGGAAGACC-TCGGCGACGGC--GTAGTAGTA--ACATCTCGCTTTGGAGTG-CTAGGCGTTGGC-CGCCGGACAATC----------GCCGTT-TCGCT-----------CATC Phyllosticta_ilicis_aquifolii_CGMCC3_14358 CTGGAATTAGTAA----TTCATTGAAAGATCCTTAGTACAGCGTTGGTCCCCCTAAAAAGGCGCCACTGGAAAAGGCTTCTCTTCACACCCCTTGTGTAC-----CTCACTATGTTGCTTTGGCG--GGTCGACCTGGTTCCGACCCAGGCGGCCGGCGCCCCCAGCCTTA----ACTGGCCAGGA--CGCCCGGCTAAG-----CTTACCATGTTGCTTTGGCG--GGCCGACCCGGTTTCGACCCGGGCGGCCGGCGCCCCCAGCCCCT--CACCGGGCCAGGA--CTCCCGGCTAAGTGCCCGCCAGTATACAAAAC-TCAAGAATTCATTTTGTGAAGTCCTGATATA-TCAT-TTAATTGATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCGCCCGCCAGTATACAAAAC-TCCAGCGATTATTACGTGTAGTCCTGATTATATTAT-TCAATTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCAACGTCCGCTGCCGGACGTGCCTTGAAGACC-TCGGCGACGGCGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCCGCTGTCGGACGCGCCTCGAAGACC-TCGGCGACGGCGTTCCAGCCTCGAGC---GTAGTAGTAAAATATCTCGCTTTGGAGGA-TGGGGCGACGGCTTGCCGGACAACC----------GCCCTC-TCGC Phyllosticta_kerriae_MAFF240047 CTGAAA-ATGTAA--TAAACCCTTCAGGTTTTGGAAGGGGG----AGC----CGTCAAAAGCTTCCCTGGTACAT-----GCCTCAC--CCCTTGTATA------TCTACCACGTTGCTTTGGCG--GGCCGACCCGGTTTTGACCCGGGCGGTCGGTGCCCCCAGCCTAGTTT-ATGGGCCAGGA--CGCCTGGCTAAG-----TCTACCACGTTGCTTTGGCG--GGCCGACCCGGTTTCGACCCGGGCGGCCGGCGCCCCCAGCCTAG--TTCTAGGCCAGGA--CGCCCGGCCAAGTGCCCGCCAGTATACAAAAC-TCAAGCGATTATTTTGTGTAGTCCTGAGAAT-TCAT-TTAATGAAGTAAAACTTTCAACAACGGATCTCTTGGTTCTGGTGCCCGCCAGTAAACAAAAC-TCCAGCGATTATTTTGTGTAGTCCTGAGAAT-TTAT-TCAATGAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCCGCTGCCGGACGCGCCTGGAAGACC-TCGGCGACGGCGAGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGT-ATTGGGCGACGTCCGCTGCCGGACGCGCCTCGAAGACC-TCGGCGACGGC----------TGGT Phyllosticta_schimae_CGMCC3_14354 CCGG------------------------------------------------CCCAAAGAAC------------------CTCTCTCA-CCCTTGTGTAC-----TCTACCACGTTGCTTTGGCG--GGCCGACCCGGTTTCGACCCGGGCGGCCGGCGCCCCCAGCCTAG--TTCTAGGCCAGGA--CGCCCGGCTACG-----CCTACCACGTTGCTTTGGCG--GGCCGACCCGGTTTCGACCCGGGCGGCTGGGACCCCCCCTCCC-----CCGGG--AGGA--CGTCCGGCTACGTGCCCGCCAGTAAACAAAAC-TCCAGCGATTATTTTGTGTAGTCCTGAGAAT-TTAT-TCAATAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGTGCCCGCCAGTAGACAAAAC-TCGACGAATGAAT---TGTAGTCCTGATACA-TCAT-TTAATTGATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCTGCTGTCAGACGCGCCTGGAAGACC-TCGGCGACGGCGGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGT-ATTGGGCGACGTCTGCTATTAGACGCGCCTGGAAGACC-TCGGC Phyllosticta_speewahensis_BRIP58044 CTGAAA-ATGTAA--T-AACTTTAAAGGACCTGGAAGGGGG----AGC----CGTAAAAAAGCTCCCTGGACAGC-----CTTTCACA-CCCTTGTATA------TCTACCCTGTTGCTTTGGCG--GGTCGACCCGGTTCCGACCCGGGCGGCCGGCGCCCCCAGCCTAGT-TTCTAGGCCAGGA--CGCCTGGCTAAGTGCCCGCCAGTATACAAAAC-TCCAGCGATTATTTCGTGTAGTCCTGAAAAT-TTAT-TCAATACATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGCATTCCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGATTTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGCATTCCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGT Phyllosticta_styracicola_CGMCC3_14985 CTGAAATACGTAAACTCTTCTTGAAAGGATCGAGTA---------GGCTGGCCCTCAAAAGCTGGCCGAAAGAGC-----CCTTCCCA-CCCTTGTGTAC-----CTTACCACGTTGCTTTGGCG--GGCCGACCCGGTTTCGACCCGGGCGGCCGGCGCCCCCAGCCCTC----GCGGGCTAGGA--CGCCCGGCTAAGCGCCCGCCAGCGTACAAAAC-TCAAGCGATTATTTTGTGAAGTCCTGATATA-TCAT-TCAATTGATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCG---GTAGTAGTAACAT-TCTCGCTTTGGAGTG-CTGGGCGTTGGC-CGCCGGACAATC----------GCCCTC-TCGCT------GGGTCGG--GCTGCGCT----AAGCTGCTTTTGCGCGTTCGGCAACATTGCCTA-AAGCGGCC--GT--CATTTTT-----TGGTG--GGGTCGG--GCTGCGCT----AGGCTGCTTTGGCGCGTTCGGCAATATCGCCCG-AAGCAGCA--TT--AGTGCGGGTGCGG--GGTGCGCTTATCAGGCCGCTT----------------ATCTCCCACACGCAAAACCCT----CCTCACCTCG-----GTCGCATCGCAACGAAA--AATTTCGCT--AACGCCCTCGCAGGA-----CCTCACCTC ; END; [ The following blocks are output data for analysis step 11433 ] BEGIN TREES; TITLE Phyllosticta_spp._on_orchids; LINK TAXA = TaxaForAnalysisStep11433; TREE Imported_tree_0 = [&R] (Diaporthe_gulyae_BRIP58044:0.70199577,(Phyllosticta_capitalensis_CBS128856:0.0,(Phyllosticta_ilicis_aquifolii_CGMCC3_14358:0.01663159,(((Phyllosticta_bifrenariae_CBS128855:0.05418339,Phyllosticta_brazilieniae_CBS126270:0.02181587)0.5560:0.02192842,((Guignardia_gaultheriae_CBS477_70:0.03589287,Phyllosticta_hubiensis_CGMCC3_14986:0.04826432)0.3710:0.0,(Phyllosticta_schimae_CGMCC3_14354:0.03698545,(Guignardia_bidwellii_CBS111645:0.03615974,Phyllosticta_styracicola_CGMCC3_14985:0.01582328)0.5020:0.00560004)0.9830:0.0313714)0.0900:0.007815)0.1360:0.02735595,((Phyllosticta_citriasiana_CBS120486:0.00595592,Phyllosticta_citricarpa_CBS127454:0.01061496)1.0000:0.02911097,((Phyllosticta_hostae_CGMCC3_14986:0.02364945,Phyllosticta_speewahensis_BRIP58044:0.02947683)0.5350:0.00802772,(Phyllosticta_citrichinaensis_CBS130529:0.03067836,(Phyllosticta_citribraziliensis_CBS100098:0.01419859,Phyllosticta_kerriae_MAFF240047:0.01091322)0.9250:0.00598862)0.4330:0.00983696)0.6550:0.01841624)0.4810:0.02266812)0.1030:0.0)0.6280:0.07824273)0.0000:0.51545093); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr63496] END;