#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 20, 2025; 4:48 GMT

TreeBASE (cc) 1994-2008

Study reference:
Geisler J. 2001. New morphological evidence for the phylogeny of Artiodactyla, Cetacea,
and Mesonychidae. American Museum Novitates, 3344: 1-53.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S743]

[ The following blocks are input data for analysis step 1150 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep1150;
        DIMENSIONS NTAX=18;
        TAXLABELS
            Balaenoptera
            Bos_taurus
            Camelus
            Canis
            Delphinapterus
            Equus
            Hexaprotodon
            Hippopotamus
            Lama
            Odocoileus
            Orycteropus
            Ovis
            Physeter
            Rattus
            Sus
            Tayassu
            Tragulus
            Tursiops
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2318]

	TITLE Extant_Taxa_Only;
	LINK TAXA = TaxaForAnalysisStep1150;
	DIMENSIONS NCHAR=186;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4" MISSING=? GAP= -;

MATRIX
[                          10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200 ]
[                           .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         . ]
Balaenoptera       01111-2-111213111011200301101110012301140000022100?10101??3100?2?0020?2000100001??????-????????-?????????--?-?-00???????0??00000??021110?020011?201{01}1{01}----???????????????------0--??110011
Bos_taurus         11011-00011?010011001403110202{01}0012100{23}30200100100001021311300112000001000220211101?10001-0100001120001001112210000001000101111100311111112{12}21112-1313221112022101111101121313211110003111
Camelus            11011-00010001011100240011110110122200??000000110011002121110021000110210002020?0?1000?01-000000112000100011221000000000010110121031?110002221102?1313{01}21??2032101101001121313211011001011
Canis              ?1011-00010001001000120011010100112200{23}2000010101000001000100000201101010011100100100001001000100010002?21100?000000{01}00?010000010011011000100010200000021002000010000000121110{01}10000000000
Delphinapterus     01111-2-111113111010111301101101-10111310000100000010100?0300011?012002001000011?0?0???????????????????????????????????????000000-021110002001??100010------------------------------1100??
Equus              01011-0{01}1011000111010410010201100121000200111121111100013112002100{01}1100000210212001?20-10??1001010?000100111200110010100110111110031111101212110101313201212020010010000021313220011000000
Hexaprotodon       0?{01}???2-??110?01110010031??201100132013300001110?01100101032000110110000101110020030011100010001110000100-10021000010000020000010031011011222110201110121?010320111110001210100100121?20??
Hippopotamus       0101??2-??110?0111001003110201100032013300001110001101{12}010330001{12}011000010100002003001111-10000?011000100-101210000100000{02}00001100310110012211102011112210020220111110001211100100121120??
Lama               1?0???00010?0?0{01}1100240011120210123100??0000101100000121211101110?01?02{01}00220{12}0?0?1000?01-{01}0000?112000100??122?0000000000101111210311110002221102?13131211120321011110011213??2110100010??
Odocoileus         10011-01011001011000011311020101022200{12}3021010010010202{01}2102110121000000002201011?1?10001-01000{01}1120001000112210000000000201111?00211110112121112?131322111{12}022101121101121313221110??31??
Orycteropus        -0?0002-001000000-----?--0-?000000010001000000110000000030120021000100010022020?1??????01-????????????1????????????????????0000100300000010000001100101011011000100000000100100100110?????
Ovis               10011-00011001?11000021301020101022100{12}302001001001011213112101120000000002101111?1?10001-0100001120001001112210000000000101?11100211111102121112?1313121112032101121101121313221012003111
Physeter           01111-2-111?13111010211301101210--2101?400001{02}??00010100?03000???0120020010000011?-?--??-------?---------??-?-?------------00-000-02111000200???0?0010------------------------------1100??
Rattus             1100000101001100100110?3011002?0010100{12}020001001100100000010??30{12}1000000000101010?3????01-???????0?00020{12}?11??1110?11??0110000010010001000000000201010201201000011??000000001000000000{01}0??
Sus                01011-2-1100010111002200010202200010--34?210111000000010310310320101000000011202003001121-100010111000100-11{01}00000011000010100110021111111202110211111121002032001101000121111020012000011
Tayassu            01011-2-11100101110?121001020120{12}030--320001111100100010312000110101000010001002001101101-010010110000100-10000000?110000101001100311111112221102112121?10020320111010001221120210100000??
Tragulus           10001-00000001011100241011?10101023100000?0000010010002000{01}200002?001000001101011?1110?01-1000{01}?010000100101221000000000010110110021?110102{01}2111201212{12}2121203210111111112111221111{02}0031??
Tursiops           01111-2-111213111011211301101211020101?{12}0000??100001010???3000?1?0120020?1??0??1???????????????????????????????00???????0??00??00-021110?020011?000011-------------------------0--??110011
;
END;

[ The following blocks are output data for analysis step 1150 ]
BEGIN TREES;
      TITLE Tb5926;
      LINK TAXA = TaxaForAnalysisStep1150;
      TREE Fig._10A = [&R] (Orycteropus,(Rattus,(Canis,(((Hippopotamus,Hexaprotodon)Hippopotamidae,((Sus,Tayassu)Suina,(Equus,((Lama,Camelus)Camelidae,(Tragulus,((Odocoileus,Ovis),Bos_taurus))Ruminantia)Neoselenodontia))),(Balaenoptera,(Physeter,(Tursiops,Delphinapterus))Odontoceti)Cetacea))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr3828]


END;