#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 20, 2025; 2:15 GMT TreeBASE (cc) 1994-2008 Study reference: Coleman A. 2001. Biogeography and Speciation in the Pandorina/Volvulina (Chlorophyta) Superclade. Journal of Phycology, 37: 836-851. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S758] [ The following blocks are input data for analysis step 1197 ] BEGIN TAXA; TITLE TaxaForAnalysisStep1197; DIMENSIONS NTAX=38; TAXLABELS Chlamydomonas_reinhardtii Gonium_pectorale_Russ Pandorina_colemaniae_U2578 Pandorina_morum_A118 Pandorina_morum_A128 Pandorina_morum_A138 Pandorina_morum_A154 Pandorina_morum_A160 Pandorina_morum_A164 Pandorina_morum_BARB Pandorina_morum_CHILE Pandorina_morum_Kiev Pandorina_morum_MONG Pandorina_morum_Mad Pandorina_morum_Noz3923 Pandorina_morum_U1730 Pandorina_morum_U2327 Pandorina_morum_U2328 Pandorina_morum_U853 Pandorina_morum_U857 Pandorina_morum_U865 Pandorina_morum_U869 Pandorina_morum_U871 Pandorina_morum_U874 Pandorina_morum_U879 Pandorina_morum_U881 Pandorina_morum_U882 Paulschulzia_pseudovolvox_U165 Volvulina_boldii_U1761 Volvulina_boldii_U2186 Volvulina_compacta_NIES583 Volvulina_compacta_Nozaki Volvulina_pringsheimi Volvulina_steinii_Arg Volvulina_steinii_Chile Volvulina_steinii_U1525 Volvulina_steinii_U1531 Yamagishiella_unicocca_U2428 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2368] TITLE Pandorina_Volvulina_ITS_Fig._3; LINK TAXA = TaxaForAnalysisStep1197; DIMENSIONS NCHAR=811; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Chlamydomonas_reinhardtii AATCTA--TCACAATCCACA------------CCGCGAACTAACAC---TGTTGGCCT----CCGTCTGT-GTAAAA--------------------------------------GCAAACGGGC-CAGGTC-TGGGCGCAATGT---------------AAAAGTTACGCCTGGCCTGGGTTGCC--GCAA-------------------------------------------------GGCATCGGTCTC----TTATACTAACC----AACCAACACCAAA--CCAAAACTAAATTAAAA---CCGAGTATCTAGCTTAGAGCTA---GTGCTCAC--TAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCATATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCCCTACTCCAACATACACTT--GTGTGTTTGGAGCAAGAGCGGACCTGGCTGTCTCGGTGTTTGA----------TTTTCGGATCAGACGCCGGGTCAGCTGAAGT--ACAGAGGTT--GAT--GCATGGACCCGC---TTA------TGGGCCTCTACTGGGTAGG-CAACTCG----TTGCTA-----ATGCTTTAGTAGATGGCTT---GGAGC--TGTGCT----TGTCGACCCAAAC-CAGGAA---CTTTGGCCCT--GTGC-CG-AAGCAAACCCCTATTTTC Gonium_pectorale_Russ AATCTA--TCACAATCCACAA-----------CCGTGAACCGTAC----TGTTGGCCT----CTCAATGGGCTT---------------------------------------GCCTGTTGAGGC-TAG---TTGTGAGCTTAGTTT-------------GCGCTTCGCTCATGGCTAGGTCGTGGCTAGGGCATTTT--------------------------------ATGCATCTAGCTGCGTCGGTC-------TTTACTAACC----AACCAACACCAAACCAAACTAAAATAAAAA-----CCGAGCGTACAGCTTAGAGCTGT---CGCTCAC--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCATATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCTCTCCCTCCCT----------GGTGTGGGTATGAGAACGGATCTGGCTGTCTCGGCAATCAC------------------TTGATTGCCGGGTCAGCTGAAGT--GCAGAGGTT--GAT--GCATGGACCCGC---TAA------TGGGCCTCTACTGGGTAGG-CAATTCG----TTGCTA-----ATGCTTTAGTAGATGGCTT---GGGAC--TGTGCC----TGTTGACCCAAAC-CAGGAA---CTCAGCCTC---GTGCTGAG---CAAACCCCTATTTTC Pandorina_colemaniae_U2578 AATCTA--TCAA--ACCACACTT--------TACGTGAACCATCTA---TGTTGGCCAT---CTGTGTGTGCCTAAG----------------------------------AAACACACATGGAT-TGGAT--TAGGGTCTGAGC------------------AATCGGACCTAATCCAGCTGTTGGATAGCTGCTGCTG-------------------------CAAACTACAGCTGTCTGGCATCGGC--------CTTGCCAACCC---TACCAACACCAAACATTAAACAAATCAATA-----ATGGATGCATGGCTTAGAGCTGT--GTGTTCAA--CAACCAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCATATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCGCTCACAGTTA---------------------CACTGTGTGCGGACCTGACTGTCTCATCACAATC------------------ACTTGTGATGGGTCAGTTGAAGTGTGCAGCTGTT--GGT--ACATGGACCCGC---TAA------TGGGCCTCTACTGGGTAGG-CAATCT-----TTGCTA----CATGCTTTAGTAGATGGCTT--AGGATCCTTGTG------TGCTGACACAAAG-CAGGAA--TA--TGCATCC--GTGCAT---ATCAAATCAC-TTTTCC Pandorina_morum_A118 AATCTA--TCAA--ACCACAC-----------CTGTGAACCATCTA---TGTTGGCCAT---CTGTACGCCTTC---------------------------------------GGGTGTACAGAT-TGGGC--TGTGTCCGATT-----------------AATTTTGGATGTAGCCCAGGCGTCAGCTCCTGCC---------------------------------TCTGGCTGGAGCCGGCTTCGGCC-------CTTACTAACCC---AACCAACACCAAACCAAATATCTAATACAAA----TCGAATGCATGGCTTAGAGCTGT--GAATTCAC---AACAAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCACCCTAATATCCCTA--------------GGGATTCTAGTGTGGACCTGACCGTCTCAGCATGAG------------------CAATCATGCTGGGTTGGTTGAAGTTTGCAGCTGCT--GAT--ACATGGACCCGC---TAA------CGGGCCTCTACTGGGTAGG-CAATCTT----TTGCTA----CATGCTTTAGTAGACGGCTT--AGGATCCTTGTG------TATTGGCACAAAG-CAGGAA--TAC-TGGCTT---GTCCGG-----TACTCATCCTTTTTC Pandorina_morum_A128 AATCTA--TCAA--ACCACAC-----------CTGTGAACCATCTA---TGTTGGCCAT---CTGTACGCCTTC---------------------------------------GGGTGTACAGAT-TGGGC--TGTGTCCGATT-----------------AATTTTGGATGTAGCCCAG-CGTCTGCTCCTGCC---------------------------------TCTGGCTGGAGCCGGCTTCGGCC-------CTTACTAACCC---AACCAACACCAAACCAAATATCTAATACAAA----TCGAATGCATGGCTTAGAGCTGT--GAATTCAC---AACAAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCTTCAGCGTCGGGTA-AAAACTCACCCTAATATCCCTA--------------GGGATTCTAGTGTGGACCTGACCGTCTCAGCATGAG------------------CAATCATGCTGGGTTGGTTGAAGTTTGCAGCTGCT--GAT--ACATGGACCCGC---TAA------TGGGCTTCTACTGGGTAGG-CAATCTT----TTGCTA----TATGCTTTAGTAGACGGCTT--AGGATCCTTGTG------TATTGGCACAAAG-CAGGAA--TAC-TGGCTT---GTCCGG-----TACTCATCCTTTTTC Pandorina_morum_A138 AATCTA--TCAA--ACAACACTTAT------TACGTGAACTACCTA---TGTTGGCTATGTACTGTACAGCTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTACATTA--CAT-GGCCG-----TTTTACTAACCCT--TACCAACACCAAAACCTTTAAACAATTAA------TAGAATGCATGGCTTAGAGCTGT--GCGTTCAA-CGAACAAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCGCACTAAATCACCATGTGT-----------ATGGTTGTGTGCGGATCTGACCGTCTCAGCTATGTGTTCT-------------ACATATGGCTGAGTTGGTTGAAGTGTGCAGCTGTT---AT--ACATGGTCCCGT---TATA-----TGGGCCTCTACTGGGTAGG-CAATTCG----TTGCTGC--AAATGCTTAAGTAGATGGCTTCTAGGGAC--CGTA------TTATGACACAGCAACAGGAAT--------------------------ATCACCTTTTATCC Pandorina_morum_A154 AATCTA--TCAA--ACAACACAT--------TACGTGAACCATTCTA--TGTCGGCTGT---CTGGAGCATGTGTGT------------------------------AATGCATGTTCTCTAGAT-TGGAA---GGACTTTTAGTAGGATGT?TTACACATCCTGAATAAGTACTTCCAGGTGCTAAATGTACG-----------------------------------TCTGTACACTTTGGCATGGGCCCT----TTTTGCTAACCTTTACACCAACACACCAAAGTACATTTAAATACAA--CTGAGAGTGTATGGCTTAGAGCTGT--GCATTCGCCTTAACCAAT-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGGACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCTTCAGCGTCGGGTA-AAAATTCGTACACATATATATCCCTT--------GGTATATATGGATGCGGACCTGACTGTCTCAGCATGCATAC----------------ATGTGTGCTGGGTCAGTTGAAGTATGCAGCTGTC--AA---ACATGGACCCAT---TAAA-----TGGGCCTCTACTGGGTGGG-CAATGTTTA--TTGTTGCTACAAAGCTTTAGTAGATGGCTT--AGGACCCATGTAT-----ATACGACACAGCATCAGGAAA----------------------ACAAGACACCTTTTATCC Pandorina_morum_A160 AATCTATATCAA--TCCACACTATA-----ACACGTGAACTAATGACC-CGTTGGCCTT---CCACCGTTGGTGCTGTTTAA---------------------TATGACAGCACTGGTGGTGGAATTAGCG--TGGAATTAGAAAT---------------------AATTCTACGCTAGCCGTCAGTTGTGCCTCTGTGCAAATGCATGCATCTTTTGCATGCATGAGCACATGTGCTCTGGCTTCGGCCTTAT-AATTTACTAACC----AACCAACACCAAAAAATAAATTCAATTTTA-TACATAATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCGCCAAAATTACTTTTACTAA----TTAGTAATTGCGGTGTGGAACTGACTCTCCCGTGTGGGTTTT------------AATTAATTCACGCGGGTTAGTTGAAGTTTTCAGTTGCT--GCA--ACATGGACCCGT---TTAA-----TGGGCCTCTACTGGGTAGG-CAGTTTTAA--TTGCTA----CATGCTTTAGTAGACGGCTT--AGGGTT--TATGACCTT-TGCTGGCACAAAC-CAGGAAA-------------------------ATTTAACCTTTTTTC Pandorina_morum_A164 AATCTA--TCAAAATCCATACCACAT-TATACCTGTGAACCTAAAT---CGTTGGCCAG---CAATCTTTTCTTGATGCTTTGCTCCT--------------AGGAGTGAACAGAGAGGATTGTT-TGGGGG-GCGTGTGT-----------------------CATGCATTTCCCCTAGGCGTTCATGCATTGG------------------------------CTGTCGCCATTGCATGGGCCTCGGCCGTTC--TCTGTCTAACT------CCA-CACCAAAC-TTAAACCAACCATAAA----CCGACTGTATGGCACAGTGCCGT--ATTGTCAA--CAACCTA--GACAACTCTCAACAACGGATATCTAGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCCTGTTGTGCACACTCT-------GTTGTTCACACATGCGCGGAACTGGCTGTCTCAGCATATATTT----------------GTATATGCTGGGTCAGCTGAAGTATGCAGCTGTT--GAT--GCATGGACCCGC---TATA-----CGGGCCTCTACTGGGTAGG-CAATTGAGT--TTGCTG---TCATGCTTTAGTAGATGGCCT--AGGATC--TGTGCT------TCAGCACGAAA-CAGGAAACACCGACTG-----GTCGGTGTACAACTA-TACTTTATCC Pandorina_morum_BARB AATCTA--TCAAA-TCCACACAC---------ATGTGAACCTTCAA---TGTTGGCCAT---CTAGTGGAGAGCGTGTGTGTGTGTGTGTGTGTC?CACGCACACGCACACCCCCCCCATTAGAT-TGGGATCCGTACACAGC--------------------ACGTGCACGGGTTCTAGGCGTTTGTCGTACATCAGCC-----------------------AGCTTCTGCTGTACGGCAGGCATCGGCCC------TTAACTAACTTC--AACCAACTCTTAACTGAAGAAACTAACAA------CTGACAGTACGGCTAAGAGTCTT--ACTGTCGA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCCACCACATTCCCATC--AATCTGCGGAATGTGTTTCTGGCGGAACTGACTGTCTCGGCACGTGTTTTTT---------GCAAACACAGGCCGGGTCGGTTGAAGTTTTCAGCTGCT--GAC--ACATGGACCCGC---TCAA-----TGGGCCTCTACTGGGTAGG-CAATTAACC--TTGCTACA--AATGCTTTAGTGGATGGCTT--TGGATCCATGGCTG----TGTCAGCACACAAACAGGA----ACATGC-ACACCTTGCATG-----ATCTTCTTTTTTCC Pandorina_morum_CHILE AATCTATATCAA--TCCACATTTTACT--TACCCGCGAACCAATGACC-CGTTGGCCTT---CCATGTACGTATTGTTTTGGTT---------------AATATCAACAAAGTACGTATGTGGAATTGGTAC-GAAAGTGTTGAAATAT----------------ATACTTTTGCACCAGCCGTCAGTGTATTAATATTGTGTACGA-----------CAAGTACGCAATTTTATTGCATTGGCTTCGGCCTTATTAATTAACTAACC----AACCAACACCAAAACTAATATTACTAATAATTACATAATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCAAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCATGCCTCATTAATTATTTAA-----TTAACTAATGAGCACATGGAACTGACTATCCCTTGTGTTATATTT--------AATTATATAGCACGTGGGTTAGTTGAAGTTTGCAGCTGCT--GCA--TCATGGACCCGT---TAAA-----TGGGCCTCTACTGGGTAAGGCAGTTTTTAA-TTGCTCT---AATGCTTTAGTAGATGGCTT--GGGGCT--TATGCTTGTGTGCCGGCACAAAC-CAGGAAT---------TAATATTTTAATATTAATAATATTCTTTTTC Pandorina_morum_Kiev AATCTA--TCAA--ACCACACCT---------TTGTGAACTAACCA---TGTTGGCCAT---TCGTGCCTTT--------------------------------------------GGCACGGAT-CGGAT--TGGGGGTTTGAAG-------------CAATTCAAACACTCAGCCCGGCTGTCGTTGCAGGG---------------------------------TCTTTTCCCTCAGCGGCATCGGCCTC-----TTTGCTAAC-------CCAACACCAAACCAAACCTAAATTACAAA----CCGAATGCATGGCTTAGAGCTGT--GTGTTCAA-AGAACCAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAACCTCGCTCTACACTCACCCATCT------GGTGTGTGTGCATGAGCGGACCTGACTGTCTCAGCACGGTGT--------------CAAAGCTGTGCTGGGTCGGTTGAAGTTTGCAACTGTT--GGT--ACATGGACCCGC---TAAA-----TGGGCCTCTACTGGGTAGG-CAACTCGT---TTGCTC----TATGCTTTAGTAGACGGCTT--AGGATTCATGT-TA----TGCCAGCACGAAG-CAGGAAT----GCGCCTT---GTGTGCATC---AAAACCCTTTTTCT Pandorina_morum_MONG AATCTATATCAA--TCCACATTTTACT--TACCCGCGAACCAATGACC-CGTTGGCCTT---CCATGTACGTATTTTTTTGGTT---------------AATATCAACAAAGTACGTATGTGGAATTGGTAC-GAAAGTGTTGAAATAT----------------ATACTTTTGCACCAGCCGTCAGTGTATTAATATTGTGTACGA-----------CAAGTACGCAATTTTATTGCATTGGCTTCGGCCTTATTAATTAACTAACC----GACCGACACCAAAACTAATATTACTAATAATTACGTAATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCAAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCATGTCTCATAAATTATTTAA-----TTAACTAATGAGCACATGGAACTGACTATCCCTTGTGTTATATTT--------AACTATATAGCACGTGGGTTAGTTGAAGTTTGCAGCTGCT--GCA--TCATGGACCCGT---TAAA-----TGGGCCTCTACTGGGTAAGGCAGTTTTTAG-TTGCTCT---AATGCTTTAGTAGATGGCTT--GGGGTT--TATGCTTGTGTGCCGGCACAAAC-CAGGAAT---------TAATATTTTTATATTAATAATATTCTTTTTC Pandorina_morum_Mad AATCTATATCAA--TCCACATCTTTTT---ACATGCGAACCTATGACC-CGTTGGCCTT---CCTGCCGTACTC-----------------------------------TACGTACGGTTTGGAATTGACAC-AGATCTATTGTAACAG----------------ACAGAACTATGTCAGCCGTCAGCGTATG--------------------------------CTCCTTTGCATATGCTGGCTTCGGCCTTA--AATTTACTAACC----AACCAACACCAAA-CTAA--TTACTAATCATTACGTAATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAAGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCGTCATATATTTTC-----------------TATGTGACGTGGAACTGACTTTCCCTTGTTTTTTTATT--------TAATTAAAATCACACGGGTGGGTTGAAGTTTGCAGCTGCT--GCA--TCATGGACCCGT---TAA------TGGGCCTCTACTGGGTAGG-CAGTTTGAAA-TTGCTA----TATGCTTTAGTAGATGGCTT--AGGGTT--TATGCTTGTGTGCTGGCACAAAC-CAGGAAA-------------------CATTTAACCAAAATCTTTTTC Pandorina_morum_Noz3923 AATCTA--TCAA--ACCACAC-----------TTGTGAAC{CT}AACCA---TGTTGGCCAT---T{CT}{AGT}T{AG}C{AC}T{AGT}{CT}{AC}T{CT}{CT}{GT}-----------------------------------GGT{AG}{GT}G{ACT}{AG}{ACT}G{AG}AT-CGG{GT}{AT}--T{GT}{AG}GGG{CT}TT{AG}A{AGT}--------------{CT}{AT}{AT}{ACT}{ACT}{ACT}A{ACG}{ACG}C{ACT}{CGT}{AT}{AC}{AT}{AG}{CT}CCGGCTGTC{AG}TTGCAGGG-----------------------------------T{GT}{CT}TCCC{CT}CAGCGGCATCGGCC{CT}------TTTGCTAAC-------CCAACACCAAAC{AC}{AT}AACAT{AT}AA{ACT}{ACT}A{ACT}A------{CT}{CT}G{AG}A{CT}{AG}CA{AT}GGCT{AT}AGAGC{CT}?T--GTGTTCA{ACT}-ACAACCAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAA{AC}CTCGCTC{AT}A{AC}A{ACT}{ACT}{AC}{AC}{ACT}{ACT}{ACT}-----------G{GT}GTG{CT}GT{CG}{CT}A{AGT}GAGCGGA{AC}CTGACTGTCTCAG{CT}A{AC}{AGT}{CG}{CGT}------------------{AC}A{AG}C{AT}GTGCTGAGTC{AG}{AG}TTGAAGTTTGCAGCTGTT--GGT--ACATG{AG}ACCCGC---T{AC}AA-----TGGGCCTCTACTGGGTAGG-CAA{CT}{AT}CGT---TTGCTC----TATGCTT{AT}AGTAGACGGC{CT}T--AGG{AT}T{CT}--T{AG}TGT{ACT}A---TGCCA{AG}CACAAAG-CAGGAAT----GCGCC{AT}T---GTGTGCAT{CT}-----A{AC}{AC}{AC}C{CT}TTTT{CT}{CT} Pandorina_morum_U1730 AATCTA--TCA{AT}A-TCCACACA{CT}---------{AG}CGTGAACCAT{AC}{CT}----TGTTGACCAT---C{CT}GTGTG{CT}{AG}C-----------------------------------------GT{AG}CA{CT}{AG}C{AG}GAT-TGGG{AG}--TGC{ACG}{AT}GC{CT}GT{CT}-------------------A{AC}A{ACG}GCA{GT}{CT}CATCCCAGGCGTCTACGC{AG}{CT}------------------------------------C{GT}{CT}{CT}G{CT}{AG}{CT}GC{AG}TAGGCTCAGGTC-------TTAACTAACCC---AACCAAC{AT}A{CT}{CT}TAA-{CT}TTAA{ACT}{AT}{AG}AA{ACT}{ACT}{AT}A------{CT}CG{AG}{AGT}TG{CT}{AC}TGGCTAAGAGTCA{CT}--GCATTCA{AC}--{AT}AACCAA--GACAACCTTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCAC{AT}{CT}{AT}ACC{AC}{AT}{AC}CC------------------GGGTA{CT}G{AT}{CT}GTGGAACTGGCTGTCTCAGCAT{AG}{CT}{AG}{CGT}{AGT}------------------{ACT}{CG}{CG}{AC}{AT}GCTGGGTCAGCTGAAGT--{AG}CAGATGTC--{AG}AC--ACATGGACCCG{CT}---T{AT}A------TGGGCCTCTACTGGGTAGG-CAATTTA----TTGCTA----{CT}ATGCTT{AT}AGT{AG}GA{CT}GGCTT--AGGATC--TGTG{ACT}-----{CGT}GT{AG}GACACAAAA-CAGGA----GCATGCC{AT}{CT}---GTG{CT}GTGC{CT}TACA{CT}GT{AG}CCTTTT{AT}TC Pandorina_morum_U2327 AATCTATATCAA--TCCACACTTTA-----ACACGTGAACTAATGACC-CGTTGGCCTT---CCACCATTGGTGCTGTGTAA---------------------TGCAGTAATACTGGTGGTGGAATTGGCG--TGGAGTTAGAAAT-------------------AATTGCTCGCGCCAGCCGTCAGCAGGTGG?------------------------------------?GCTGCATCTGGCTTCGGCCTTT-AAATTTACTAACC----AACCAACACCTAAAAATAAATTCTAATTAA-TACATAATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCGCCAAAATTACTATTTAA------TTAGTAATGGCGGCGTGGAACTGACTCTCCCGTGTGGGTTTT------------AATTAACTCACGCGGGTTAGTTGAAGTTTTCAGTTGCT--GCA--ACATGGACCCGT---CTAA-----TGGGCCTCTACTGGGTAGG-CAGTTTTAA--TTGCTA----CATGCTTTAGTAGACGGCTT--TGGGTT--TATGACCTT-TGCTGGCACAAAC-CAGGAAA----------------------ATTACTAACCTTTTTTGC Pandorina_morum_U2328 AATCTATATCAA--TCCACACTATT-------ACGTGAACCTCTAAAT-CGTTGGCCTT---CCACCTT---------------------------------------------AACGGGTGGTA-TGGTAC-GGTATCGCTGCAAAG------------------CGATGCTGTGCTAGCCGTCAGCTGCACGGAT---------------------------------CCCGTGCAGCTGGCTTCGGCC-------TTTACTAACC----AACCAACACCTAACCAACTATAATGATAA------TCGAATGTACGGCTTAGAGTCGTTCACATTCAC--CAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCTCCAACTAA---------------------CCTTGGGTGCGGAACTGACTGTCTCATGCACGCCCT---------------GAGTGCGCATGGGTCAGTTGAAGTTTGCAGCTGCT--GCT--ACATGGACCCGC---TAA------TGGGCCTCTACTGGGTAGG-CAGTCTTGTACTTGCTA----CATGCTTTAGTAGATGGCTT--TGGATC--TGTGTTGGC---TAAGCACAAAC-CAGGAAA---------------------------CTAACCTTTTTTC Pandorina_morum_U853 AATCTATATCAA--TCCACACTTTTAT----AACGTGAACCTCAAAAC-CGTTGGCCTT---CCATAACGCGCATTTTCGGAT-----------------------------GTGCGGTGTGGAATTGGTAC-GGATGCGTGTCT--CTCG-----------CACACATGTTCGTACCAGCCGTCGATTTCATGGTTTT------------------------------GCCCATGGATTCGGCTTCGGCCTCAT--TTTTACCAACC----AACCAACACCAAAACTTAAAT-AAATT--ATTACGTAATG--CACGGCTTAGAGCCGT--ACATTCAA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACA-CTAAAAAACCT--------------GCTTTTTTGGTGTGGAACTGACTGTCTCATGTGCGCGCAC------------AAACATGCGCATGGGTTGGTTGAAGTTTGCAGCTGCT--ATT--ACATGGACCCGC---TCA------TGGGCCTCTACTGGGTAGG-CAGTTTTTAA-TTGCTA----AATGCTTTAGTAGATGGCTT--AGGATC--TGTGT----GTATTGGCACAAAC-CAGGAA-------------------------ATTAACCTTCTTTTTC Pandorina_morum_U857 AATCTA--TCAA--ACAACACATAT------TACGTGAACTACTAA---TGTTGGCTATGAGCTGTACAGCTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTGCAGTA--CAT-GGCCG-----TTTTACTAACCCT--TACCAACACCAAAAACTTTAAACAATTAA------TCGAATGCATGGCTTAGAGCTGT--ACATTCAA-TGAACTAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCATATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCGCACTACATACACATGTGT-----------ATGGTTGTGTGCGGATCTGACCGTCTCAGCTATGTGTTCT-------------ACATATGGCTGAGTTGGTTGAAGTGTACAGCTGTT---AT--ACATGGACCCGT---TATA-----TGGGCCTCTACTGGGTAGG-CAATTCG----TTGCTGC--AAATGCTTTAGTAGATGGCTTCTAGGGAC--CGTA------ATATGACACAGCAACAGGAAT--------------------------ATAACCTTTTATCC Pandorina_morum_U865 AATCTATATCAA--TCCACACATTTAT---GTACGTGAACCTATAACC-CGTTGGCCTT---CCATTTTTGCCGAATTTCGGTT---------------------------CGGCAGTTATGGAATTGACAC-AGAGTTATTGGTAACTCG--------------ATAATTCTGAGTCAGCCGTCAGAGTAAATATGCACTTG------------------------TGTGTGTTTGCTTTGGCTTCGGCCT-----TTTTACTAACC----AACCAACACCAAAAATAATTATTAAATTAAAT---ATATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACGTGTTAATTC-------------------ATTTAATACGTGGAACTGACTTTCCCTTGTGATTATTT------------ATTTATTCACATGGGTGGGTTGAAGTTTGCAGCTGCT--GCA--TCATGGACCCGT---TAC------TGGGCCTCTACTGGGTAGG-CGGTTTATAA-TTGCTA----AATGCTTTAGTAGATGGCTT--AGGGTT--TGTAT--GTGTGCTGGCACAAAC-CAGGAAA-----------------------ATTAATTTTCTTTTTTC Pandorina_morum_U869 AATCTATATCAA--TCCACACTTTTT------ATGTGAATTTTTAAA--CGTTGGCCTT---CCACCAGGGGGGGGAG--------------------------TTTCTCTCCCTCAGGGTGGAATTGGTGC-AAATTTGTTGAAATATT---------------ACAAATTTGTGCCAGCCGTCAATTGTATGGAATTTT-----------------------------CCCATACTTTTGGCTTCGGCCTAA--ATTTTACTAACC----AACCAACACCAAAAATTAATTT-AATTTAATTACGTAATG--CACGGCTTAGAGCCGT--ACATTCAA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCTAAATCTCTCCCCTGT----------GGCGTGATATATGCGGAACTGACTGTCTCATGTACACATT--------------CGTGTGTACATGGGTTGGTTGAAGTTTTCAGCTGCT--ATT--ACATGGACCCGT---TAAA-----TGGGCCTCTACTGGGTAGG-CAGTTTTTAA-TTGCTA---AAATGCTTTAGTAGATGGCTT--AGGATC--TGTGT-GGC--AATGGCACAAAC-CAGGAAA------------------------ATTAAACCCTTTTTTC Pandorina_morum_U871 AATCTA--TCAAA-TCCACACCACATATATGCCTGTGAACCTAAAT---CGTTGGCCAG---CAATCTTG----GATGCTC-GCTCCTCT-----------GTGGAGTGAACAGAGAGGATTGTT-TGGGGG-GCGTGCATTT-------------------CATATGCATTTCCCCTAGGCGTTCATGCACTGG------------------------------CTCTTGCCATTGTATGGGCTTCGGCCG-----TCTGTCTAACT------CCA-CACCAAAC-TTAAACCAACCATAAA----CCGACTGTACTGCATAGTGCCGT--ACTGTCAA--AAACCTA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCCTGTTTGT-ACACTCT-------GTTGTACACACACGTGCGGAACTGGCTGTCTCAGCATATATTT---------------------GACTGGGTCAGCTGAAGTATGCAGCTGTT--GAT--GCATGGACCCGC---TATA-----TGGGCCTCTACTGGGTAGG-CAATTGATT--TTGCTG---TCATGCTTTAGTAGATGGCCT--AGGATC--TGTGTG----TATCAGCACAAAA-CAGGAAACACCGACTC-----GTCGGTGTTCAACTATTACTTTATCC Pandorina_morum_U874 AATCTCTATCAA--TCCACACTTTTTT--TACACGTGAACCCGTAAAC-CGTTGGCCTT---CCGCCGGATTTTTTTAGAGAATTTTCAATTAA-??TAATTTAAATCAATTAATTCCGGCGGAATTGGTAC-GGCGATGTCGT---------------------ACATTTCCGTACCAGCCGTTAATTTTATGGTTTT------------------------------GCCCATAAAATTGGTTTCGGCCTTTT--TTTAACCAACC----AACCAACACCAAAA-TTAAATGAAATT--ATT---ACTAATGTACGGCTTAGAGCCGT--ACATTTAA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCATGCCTAAAAAACCGTCT---------GGTTTTTTGGAGCGTGGAACTGACTGTCTCATGTGTGTGTGT---------ATATGACACACGCATGGGTTGGTTGAAGTTTTCAGCTGCT--ATT--ACATGGACCCGC---TCA------TGGGCCTCTACTGGGTAGG-CAGTTTTACA-TTGCTAC--AAATGCTTTAGTAGATGGCTT--AGGATC--TGTGT----GTATTGGCACAAAC-CAGGAAA--------------------------CAAAACCTTTTTTC Pandorina_morum_U879 AATCTT-ATCAA--ACCACACCT--------TATGTGAACTATTTAA--TGTTGGCCAT---CTGTATTTGT---------------------------------------AAAAGAATACAGAT-TGGAA--TGGGAATG-----------------------AAAATTCTCATTCCAGCTGTTAGAGTTGG-------------------------------------TTCTCCACTCTGGCATCGGCC-------TTTGCTAACCCT--TACCAACACCTAA--TTAATAATTAATTA---TTTTCGGATGCATGGCTTAGAGCTGT--GTATTCAA--AAACCAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGGACGCAAAATGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCGCTCTCAACTATATGTTGTAATTAATATATAGTTGTTGGTGCGGACCTGACTGTCCCAGCAATTATATGTATTTATTTACATTTAAATATGCTGGGTTGGTTGAAGTGTACAGCTGTT--GGT--ACATGGACCCGC---TATA-----TGGGCCTCTACTGGGTAGG-CAATTAT----TTGCTA----AATGCTTTAGTAGATGGCTT--AGGATCCGCGTG------TGCTAACACAAAG-CAGGAA--TACGTGCCTT---GTGCATG-TATAAATACACTTTTTCC Pandorina_morum_U881 AATCTA--TCAA--ACCACAC-----------CTGTGAACCATCTA---TGTTGGCCAT---CTGTATACCTTT---------------------------------------GGGTGTACAGAT-TGGGC--TGTATCCAATT-----------------AATTTTGGGTGTAGCCCAGGCGTCAGCTCCAGCC---------------------------------TCTGGCTGGAGCCGGCTTCGGCC-------CTTACTAACCC---AACCAACACCAAACCAAATATCTAATACAAA----TCGAATACATGGCTTAGAGCTGT--GAATTCAC---AACAAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCACCCTAAAATCCCTA--------------GGGATTCTAGTGTGGACCTGACCGTCTCAGCATGAG------------------CAATCATGCTGGGTTGGTTGAAGTTTGCAGCTGCT--GAT--ACATGGACCCGC---TAA------CGGGCCTCTACTGGGTAGG-CAATTA-----TTGCTAC---CATGCTTTAGTAGACGGCTT--AGGATCCTTGTG------TATTGGCACAAAG-CAGGAA--TAC-TGGCTT---GTCCGG-----TACTCATCCTTTTTC Pandorina_morum_U882 AATCTA--TCAA--ACCACACCT---------CTGTGAAC{CT}ATA{AC}----TGTTGGCCAT---CTGTAC{CT}G{CT}-------------------------------------------AAGGTATGGAT-{CT}GGA{AGT}C-TGG{CT}{CT}T{CT}{AG}AAGCAATT----------------{CT}G{AC}G{AG}{CT}{CT}AGATC{CT}{AG}GCTGTC{AG}TC{ACT}TGAG{AG}{AG}GC{CG}{AT}{CGT}{AG}{ACT}{AC}-------------------------GC{GT}CTCTCTC{AT}T{CT}GGCATCGG{CT}C------TTATACTAACCTT--TACCAACACCAAACCTTAACAAT{AC}AATACAAC---ACGGATGCATGGCTTA{GT}A{GT}CTGT--GTGTTCAC--AAACCAAA-GATAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGTCTCAGCGTCGGGTA-AA{CT}ACTCGCTC{CT}{AG}AA{AG}CA{CT}C{AC}TT{CT}{AT}---------GGG{GT}T{AG}T{GT}GA{GT}{GT}{AT}GCGGACCTGACAGTCC{CT}AACACATGT----------------{ACT}ACAGTGTGGTGGGTCAGTTGAAGT--GTAG{AC}TGTT--GGT--ACACGGACCCG{AT}---TCA------{CT}GGGCCT{ACT}TACTGGGTAGG-CAA-T{AC}{GT}CA--TTGCTA----{AC}ATGCT{GT}TAGTAGATGGCTT--AGGAGC--TGTG------TGCTGGCAAAA---CAGGAAT--ACATGTCTT----CATGTATA-{CT}ACATACACT{CT}TTT{CT}C Paulschulzia_pseudovolvox_U165 AATCTA--TCACAATCCACAA-----------CCGTGAACCACTT----TGTTGGCCT----CCACAATCCTTC--------------------------------------GGGCTTTGTGGGC-TGGCCC-GGCCTGATTCATTTC--------------------GGGCTGGGACAGGTCCTTGGCTTCGCC---------------------------------TTGCGGCGCTGCTGGGGTCGGTCT------CTAATTAACC----AACCAACACCAAA--CCAAAACACCTAAACAAAACCTGAGTGCC-GGCTTAGAGCCG---AAGCTCAT--CAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAACCATCGAATCTTTGAACGCATATTGCGCCCGCGTCTTCGGACAAGGGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCAATACAGATCCAT-----------GTGGTTTGTCTATTGCGGACCTGGCCGTCCCGATTGATT------------------CAATTCGGTCGGGTCGGCTGAAGA--ACAGAGGTT--GAC--GCATGGACCCGA---TA-------TGGGCCTCAACTGGGTAGG-CAATTCG----TTGCTG----TATGCTTTAGTTGATGGCTT--GTGGAC--TGTGCAT---TGTCGGCCCTAAC-CAGGAA---CCAAGCCTT---GCGCTTGG---AACAAACCCATTTTC Volvulina_boldii_U1761 AATCTA--TCAA--ACCACAC-----------ATGTGAACCAAAC----TGTTGGCCAT---CTTTGGGCTGTT-------------------------------------TACGGACCAAAGAT-TGGGT--TGGTACGGGAG-----------------AAATCCTGGATCAATTCAGGCGTTGGGCCCAACAATATA------------------------------TTGTTGAGCCTGGCTCCGGCCT-----AAATACTAACCC---TACTAACTCCAAAAAATAAATCTAACAAAA----TCTGGATTCACGGCTTAGAGTCGC--ACATCCAA--CAATAAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTG-AAAACTCATGCGTGAAAACCCTGTCATATACAGGAAGTTTCCATAGCATGGACCTGACTGTCTCAGCATATT-------------------TTATATGCTGGGTCAGTTGAAGTTTGCAGTTGCT--GAT--ACATGGACCCGC---TATA-----CGGGCCTCTACTGGGTAGG-CAATGTT----TTGCTA----CATGCTTTAGTAGACGGCTT--AGGATCCTTGCG------TGTTGGCACGAAA-CATGAA--TAC-TGGATT----TCCAG---TAAATAAATCCTTTTTC Volvulina_boldii_U2186 AATCTA--TCAA--ACCACAC-----------ATGTGAACCATCT----TGTTGGCCAT---CTTTGGGCATACT----------------------------------------GCCCAAAGAT-TGGAT--TGGTACAGGAG-----------------AAATCCTGGACTAATTCAGGCGTTGGGCTCAACAATACA------------------------------TTGTTGGGCCTGGCTCCGGTCT-----AAATGCTAACCC---TACTAACTCCAAAATTTAAATCTAATAAAA----TCTGGATTCACGGCTTAGAGCCGT--ACATCCAA--CAACAAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTG-AAAACTCATGCGTGGAAACCCTGTTATA--CAGGAAGTTTCCATAGCATGGACCTGACTGTCTCAGCATATT-------------------TTATATGCTGGGTCAGTTGAAGTTTGCAGTTGCT--GAT--ACATGGACCCGC---TATA-----CGGGCCTCTACTGGGTAGG-CAATTTT----TTGCTA----CATGCTTTAGTAGACGGCTT--AGGATCCTTGTG------TGTTGGCACGAAA-CAGGAA--TAC-TGGATT----GCCAG---TAAATAAATCCTTTTTC Volvulina_compacta_NIES583 AATCTA--TCAAA-TCCACACAC---------ACGTGAACCATCC----TGTTGACCAT---CTGTGTGTGCACTTG-----------------------------------TGTGCACACAGAT-TGGGG--TGGGTGCCGTT-------------------AAAAGCATTCATCCCAGGCGTCTATGCAC------------------------------------CTCTGTGTGCATAGGCTCAGGTC-------TTTACTAACTC---AACCAACAATCTAA-CTAAATTAATAAAAA-----TCGAGTGTATGGCTAAGAGTCAT--GCATTCAC--TAACCAA--GACAACCTTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACACTACCCAACC------------------GGGTATGTTGTGGAACTGGCTGTCTCAGCATGCATT------------------AGCAAGCTGGGTCAGCTGAAGT--GCAGATGTC--AAC--ACATGGACCCGT---TAA------TGGGCCTCTACTGGGTAGG-CAATTTA----TTGCTA----TATGCTTTAGTAGATGGCTT--AGGATC--TGTGTA----AGTAGACACAAAA-CAGGA----GCATGCCTT---GTGCGTGC-TACATGTACCTTTTATC Volvulina_compacta_Nozaki AATCTA--TCAAA-TCCACACAC---------ACGTGAACCATCC----TGTTGACCAT---CTGTGTGTGCACTTG-----------------------------------TGTGCACACAGAT-TGGGG--TGGGTGCCGTT-------------------AAAAGCATTCATCCCAGGCGTCTATGCAC------------------------------------CTCTGTGTGCATAGGCTCAGGTC-------TTTACTAACTC---AACCAACAATCTAA-CTAAATTAATTAAAA-----TCGAGTGTATGGCTAAGAGTCAT--GCATTCAC--TAACCAA--GACAACCTTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACACTACCCAACC------------------GGGTATGTTGTGGAACTGGCTGTCTCAGCATGCATT------------------AGCAAGCTGGGTCAGCTGAAGT--GCAGATGTC--AAC--ACATGGACCCGT---TAA------TGGGCCTCTACTGGGTAGG-CAATTTA----TTGCTA----TATGCTTTAGTAGATGGCTT--AGGATC--TGTGTA----AGTAGACACAAAA-CAGGA----GCATGCCTT---GTGCGTGC-TACATGTAC-TTTTATC Volvulina_pringsheimi AATCTA--TCAAA-TCCACACAATA------CACGTGAACTACTA----TGTTGACCAT---CCGTGA-------------------------------------------------AAACGGAT-TGGGT--TGGAGGCAGGTTACAC-----------------TGTTTCCAGCCCAGGCGTTAGTGCCTGCATT---------------------------------CTGCAGACACTGGCTTCGGTC-------TTTTCTAACTACT-AACCAACACATAACTGAATAA-CTAAA-------TCCGAACATACGGCTAAGAGTCGA--ATGTTCAA--TAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACACGCTCAATCCATTC----------------ATGGGTATGATGCGGAACTGGCAGTCTCGGTAGCTT--------------------CGGTTGCTGGGTCTGCTGAAGTTTACAGCTGTT---GC--ACAAGGACCTTC---TA-------TGGGCCTCTACTGGGTAGG-CAAACTT----TTGCTA----AATGCTTTAGTAGATGGCTT--AGGATC---GTTG-----TGCTGACACTAAT-CAGGA----GCATGC------ATGCATGC-----AAAACCCTTTTTC Volvulina_steinii_Arg AATCTA--TCATAAACCACAC-----------ACGTGAATTATTTA---TGTTGGCCAT---CCGGGGTAAAA---------------------------------------------TCCGGGT-TGGGG--TAAATTTACCGCAA------------------GGCAAGTTTATCCTGGCTGCCGTACTACTAT------------------------------------CTAGTAGTTGGTTTCGGC--------CGTACTGCT-----AACCAACAACAAACTAAATAACTATTAAAA-----ATGGATGTACAGCATAGTGCTGT--ATATTCGC--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGGGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACTTCAACATCC--------------------CTGTTGGAGTGGAACTGACCGTCTCAGCAACTT--------------------TCGTTGCTGGGTCGGTTGAAGTTTGCAGCTGCT--GAT--ACATGGAACTGC-CGTAT------CGGGCCTCTACTGGGTAGG-CAATTAATT--TTGC--------TGC---AGTAGTTGGCTT--CGTGTC--CGTG------TGTTGGCACAAAA-CAGGA----ACATGCCTCT---GGCAC----TATCCTCTCTTTTATC Volvulina_steinii_Chile AATCTA--TCATAAACCACAC-----------ACGTGAATTACTTA---TGTTGGCCAT---CCGGGGTAAAA---------------------------------------------TCCGGGT-TGGGG--TAAATTTACCGC------------------AAGGCAAGTTTATCCTGGCTGCGTACTACTATCT------------------------------------AGTAGTACGGTTTCGGC--------CGTACTGCT-----AACCAACAACAAACTAAATAACTATTAAAA-----ATGGATGTACAGCATAGTGCTGT--ATATTCGC--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGGGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACTCCAATAATA--------------------CTGTTGGAGTGGAACTGACCGTCTCAGCAACTT--------------------TTGTTGCTGGGTCGGTTGAAGTTTGCAGCTGCT--GAT--ACATGGAACTGC-CGTATGG----CGGGCCTCTACTGGGTAGG-CAATTAATT--TTGC--------TGC---AGTAGTTGGCTT--CGTGTC--CGTG------TGTTGGCACAAAA-CAGGA----ACATGCCTCT---GGCATGC----ACCTCTC-TTTATC Volvulina_steinii_U1525 AATCTA--TCAAA-TCCACACAC---------ACGTGAATTATTC----CGTTGGCCAT---TCGAAAAGAAA-------------------------------------------TTTTCGGAT-TGGGGC-TGGGCTGTTAG---------------------CTCATCTCAGCTCTGGCTGCCATATTACTAATTC-------------------------------GTTAGTAATATAGCATCGGC--------CGTACAAACTGCC-AACCAACAACCAACAAAACAAATTAT---------ACGGATGCACGGCAGAGTGCCGT--ACATTCAC--CAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACTCCTCCTTACCAT-----------------GGGAAAGAGTGGAACTGACCGTCTCAGCACGCAATC----------------GTGTGTGCTGGGTCTGTTGAAGTTTGCAGTTGCT--GAT--ACATGGAACTGC--GTATGG----CGGGCCTCTACTGGGTAGG-CAATTAACG--TTGC--------TGC---AGTGGTTGGCTTTTACGTTC--TGTGTT----TGTCGGCACAAAA-CAGG-----ACATGCCTTT---GGCATGC----AACCCTCTTTTTTC Volvulina_steinii_U1531 AATCTA--TCAAA-TCCACACAC---------ACGTGAATTATTC----CGTTGGCCAT---TCGAAAAGAAA-------------------------------------------TTTTCGGAT-TGGGGC-TGAGGTGTTAA---------------------CTCATCTCAGCCCTGGCTGCCTTATTACTAA------------------------------CTTGTTAGTAATACCGGCATCGGCC--------ATACTAACTGCC-AACCAACAACGAACCAAAAAAATTAT---------TTGAATGCATGGCAAAGTGCCGT--ACATTCAC--CAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACTCCTCCTTACCAT-----------------GGGAACGAGTGGAACTGACCGTCTCAGCACGCAA-------------------TGTGTGCTGGGTCTGTTGAAGTTTGCAGTTGCT--AAT--ACATGGAACTGC-CGCATGG----CGGGCCTCTACTGGGTAGG-CAATTAACT--TTGC--------TGC---AGTGGTTGGCTTTTACGTTC--TGTGTT----TGTTGGCACAAAA-CAGGA----TCATGCCTTC---GGCATGC----AACCCTCTTTTTTC Yamagishiella_unicocca_U2428 AATCTA--TCATAATCCACACA----------CCGTGAAATATAAA---TGTTGGCCAC---CTGTACTGCAGT------------------------------------AATGTAGTACAGGG--TGAGGTTTGTACGAGCG-----------------CAACGCCGTGCAAGCCTCAGTCGCTGTGGGTGCATATA---------------------------CTTGTGTATGCACCTTGGCGTCGGTC-------TTAATTAACC----AACCAACACCAAACCCTAAATTAATATAAA-----TCGAGTGTTCAGCTTAGAGCTG---ACGCTCAC--TAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATA-TCGCTCATTACTCACCAT-----------GGTGAGTAACCAAGCGGAACTGGCTGTCTCGGTAAGATTAA----------------TTTTTTACCGGGTCAGCTGAAGT--GCAGATGTT--AAA--CCATGGACCCGC---TA-------TGGGCCTCTACTGGGTAGG-CAACTTG----TTGCTCA----ATGCTTTAGTAGATGGCTT--AGGGAC--TGTG-------TTTGGCACAAAG-CAGGAAT-----ATTCTTAAT----TGAGTATACCCCCTTTATTTTC ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = Pandorina_Volvulina_ITS_Fig._3) = N: 1-811; CODONPOSSET CodonPositions (CHARACTERS = Pandorina_Volvulina_ITS_Fig._3) = N: 1-811; END; [ The following blocks are output data for analysis step 1197 ] BEGIN TREES; TITLE Tb5973; LINK TAXA = TaxaForAnalysisStep1197; TREE Fig._3 = [&R] (((((Pandorina_morum_U1730,(Volvulina_compacta_Nozaki,Volvulina_compacta_NIES583)),(Volvulina_pringsheimi,Pandorina_morum_BARB)),((((Volvulina_steinii_U1531,Volvulina_steinii_U1525),(Volvulina_steinii_Chile,Volvulina_steinii_Arg)),((Volvulina_boldii_U2186,Volvulina_boldii_U1761),((Pandorina_morum_A118,Pandorina_morum_A128),Pandorina_morum_U881))),((((Pandorina_colemaniae_U2578,((Pandorina_morum_Noz3923,Pandorina_morum_Kiev),Pandorina_morum_U882)),Pandorina_morum_U879),(Pandorina_morum_A154,(Pandorina_morum_U857,Pandorina_morum_A138))),(((Pandorina_morum_U865,((Pandorina_morum_CHILE,Pandorina_morum_MONG),Pandorina_morum_Mad)),(Pandorina_morum_U2327,Pandorina_morum_A160)),((Pandorina_morum_U869,Pandorina_morum_U2328),(Pandorina_morum_U853,Pandorina_morum_U874)))))),(Pandorina_morum_U871,Pandorina_morum_A164)),Yamagishiella_unicocca_U2428,Gonium_pectorale_Russ); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr5604] END;