#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 10, 2024; 12:55 GMT TreeBASE (cc) 1994-2008 Study reference: Chen S.F., Morgan D., Hasey J., Anderson K., & Michailides T.J. 2013. Phylogeny, morphology, distribution, and pathogenicity of Botryosphaeriaceae and Diaporthaceae from English walnut in California. Plant Disease, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S14888] [ The following blocks are input data for analysis step 12651 ] BEGIN TAXA; TITLE TaxaForAnalysisStep12651; DIMENSIONS NTAX=83; TAXLABELS Botryosphaeria_dothidea_10_117 Botryosphaeria_dothidea_10_1172 Botryosphaeria_dothidea_160_208 Botryosphaeria_dothidea_160_2082 Botryosphaeria_dothidea_48_113 Botryosphaeria_dothidea_48_1132 Botryosphaeria_dothidea_CMW7780 Botryosphaeria_dothidea_CMW8000 Diplodia_cupressi_CBS_168_87 Diplodia_cupressi_CBS_261_85 Diplodia_mutila_95_223 Diplodia_mutila_95_2232 Diplodia_mutila_CBS_112553_AY573219 Diplodia_mutila_CBS_230_30_DQ458869 Diplodia_scrobiculata_CBS_109944 Diplodia_scrobiculata_CBS_113423 Diplodia_seriata_11_219 Diplodia_seriata_11_2192 Diplodia_seriata_16 Diplodia_seriata_163_220 Diplodia_seriata_163_2202 Diplodia_seriata_CBS_112555 Diplodia_seriata_CBS_119049 Dothio_sarmentorum_CBS_115038 Dothio_sarmentorum_IMI_63581b Dothiorella_iberica_221 Dothiorella_iberica_CBS_113188 Dothiorella_iberica_CBS_115041 Fusicoccum_fabicercianum_CMW27094 Fusicoccum_fabicercianum_CMW27121 Fusicoccum_ramosum_CMW26167 Guignardia_philoprina_CMW7063 Lasiodiplodia_citricola_61_206 Lasiodiplodia_citricola_61_2062 Lasiodiplodia_citricola_IRAN1521C_GU945339 Lasiodiplodia_citricola_IRAN1522C_GU945340 Lasiodiplodia_parva_CBS_456_78_EF622063 Lasiodiplodia_parva_CBS_494_78_EF622064 Lasiodiplodia_pseudotheobromae_CBS_116459 Lasiodiplodia_pseudotheobromae_CBS_447_62 Lasiodiplodia_theobromae_CBS_124_13 Lasiodiplodia_theobromae_CBS_164_96 Neofusicoccum_andinum_CBS117453_PD252 Neofusicoccum_arbuti_CBS_116131_PD282 Neofusicoccum_arbuti_PD281_GU251283 Neofusicoccum_mediterraneum_18_222 Neofusicoccum_mediterraneum_18_2222 Neofusicoccum_mediterraneum_3_175 Neofusicoccum_mediterraneum_3_1752 Neofusicoccum_mediterraneum_34_169 Neofusicoccum_mediterraneum_34_1692 Neofusicoccum_mediterraneum_9_157 Neofusicoccum_mediterraneum_9_1572 Neofusicoccum_mediterraneum_CBS_121718_PD312 Neofusicoccum_mediterraneum_PD9_GU251312 Neofusicoccum_nonquaesitum_29_167 Neofusicoccum_nonquaesitum_29_1672 Neofusicoccum_nonquaesitum_PD484_GU251295 Neofusicoccum_nonquaesitum_PD90_GU251289 Neofusicoccum_parvum_177_215 Neofusicoccum_parvum_177_2152 Neofusicoccum_parvum_184 Neofusicoccum_parvum_209 Neofusicoccum_parvum_211 Neofusicoccum_parvum_6_214 Neofusicoccum_parvum_6_2142 Neofusicoccum_parvum_84_178 Neofusicoccum_parvum_84_1782 Neofusicoccum_parvum_CMW9080_AY236887 Neofusicoccum_parvum_CMW9081_AY236888 Neofusicoccum_ribis_CMW7772_AY236877 Neofusicoccum_ribis_CMW7773_AY236878 Neofusicoccum_viticlavatum_STE_U5041 Neofusicoccum_viticlavatum_STE_U5044 Neofusicoccum_vitifusiforme_32_109 Neofusicoccum_vitifusiforme_32_1092 Neofusicoccum_vitifusiforme_STE_U5050 Neofusicoccum_vitifusiforme_STE_U5252 Neoscy_dimidiatum_CBS499_66 Neoscy_novaehollandiae_CMW26169 Neoscy_novaehollandiae_CMW26170 Neoscytalidium_dimidiatum_114 Neoscytalidium_dimidiatum_CBS_204_33 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M19803] TITLE File_2_Botryosphaeriaceae_TEF; LINK TAXA = TaxaForAnalysisStep12651; DIMENSIONS NCHAR=354; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Botryosphaeria_dothidea_10_117 AGTTCGAGAAGG--------TAAGCACACATTTT----CTGTGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCACTCTCTGGTGAGGGGCAATTT-CTTGGTGGGGCT-GGCC-CGCGCTAAGCCTCGTTTGGTCTTCGGCAAAATCTCCGCATCT-GGATTTTTT---GTGACCGGCGTGC---------GACCGACGCGAACACCCCTCACCAACGC------TTCCAGCCACTCACGTTCGTCTATGCGACCATATGCTAACCACCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Botryosphaeria_dothidea_10_1172 AGTTCGAGAAGG--------TAAGCACACATTTT----CTGTGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCACTCTCTGGTGAGGGGCAATTT-CTTGGTGGGGCT-GGCC-CGCGCTAAGCCTCGTTTGGTCTTCGGCAAAATCTCCGCATCT-GGATTTTTT---GTGACCGGCGTGC---------GACCGACGCGAACACCCCTCACCAACGC------TTCCAGCCACTCACGTTCGTCTATGCGACCATATGCTAACCACCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Botryosphaeria_dothidea_160_208 AGTTCGAGAAGG--------TAAGCACACATTTT----CTGTGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCA--CTCTGGTGAGGGGCAATTT-CTTGGTGGGGCT-GGCC-CGCGCTAAGCCTCGTTTGGTCTTCGGCAAAATCTCCGCATCT-GGATTTTTT---GTGACCGGCGTGC---------GACCGACGCGAACACCCCTCACCAACGC------TTCCAGCCACTCACGTTCGTCTATGCGACCATATGCTAACCACCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Botryosphaeria_dothidea_160_2082 AGTTCGAGAAGG--------TAAGCACACATTTT----CTGTGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCA--CTCTGGTGAGGGGCAATTT-CTTGGTGGGGCT-GGCC-CGCGCTAAGCCTCGTTTGGTCTTCGGCAAAATCTCCGCATCT-GGATTTTTT---GTGACCGGCGTGC---------GACCGACGCGAACACCCCTCACCAACGC------TTCCAGCCACTCACGTTCGTCTATGCGACCATATGCTAACCACCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Botryosphaeria_dothidea_48_113 AGTTCGAGAAGG--------TAAGCACACATTTT----CTGTGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCACTCTCTGGTGAGGGGCAATTT-CTTGGTGGGGCT-GGCC-CGCGCTAAGCCTCGTTTGGTCTTCGGCAAAATCTCCGCATCT-GGATTTTTT---GTGACCGGCGTGC---------GACCGACGCGAACACCCCTCACCAACGC------TTCCAGCCACTCACGTTCGTCTATGCGACCATATGCTAACCACCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Botryosphaeria_dothidea_48_1132 AGTTCGAGAAGG--------TAAGCACACATTTT----CTGTGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCACTCTCTGGTGAGGGGCAATTT-CTTGGTGGGGCT-GGCC-CGCGCTAAGCCTCGTTTGGTCTTCGGCAAAATCTCCGCATCT-GGATTTTTT---GTGACCGGCGTGC---------GACCGACGCGAACACCCCTCACCAACGC------TTCCAGCCACTCACGTTCGTCTATGCGACCATATGCTAACCACCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Botryosphaeria_dothidea_CMW7780 AGTTCGAGAAGG--------TAAGCACACATTTT----CTGTGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GGATTTGCCTTA----TCA--CTCTGGTGAGGGGCAATTT-CTTGGTGGGGCT-GGCC-CGCGCTAAGCCTCGTTTGGTCTTCGGCAAAATCTCCGCATCT-GGATTTTTT---GTGACCGGCGTGC---------GACCGACGCGAACACCCCTCACCAACGC------TTCCAGCCACTCACGTTCGTCTATGCGACCATATGCTAACCACCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Botryosphaeria_dothidea_CMW8000 AGTTCGAGAAGG--------TAAGCACACATTTT----CTGTGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCA--CTCTGGTGAGGGGCAATTT-CTTGGTGGGGCT-GGCC-CGCGCTAAGCCTCGTTTGGTCTTCGGCAAAATCTCCGCATCT-GGATTTTTT---GTGACCGGCGTGC---------GACCGACGCGAACACCCCTCACCAACGC------TTCCAGCCACTCACGTTCGTCTATGCGACCATATGCTAACCACCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Diplodia_cupressi_CBS_168_87 AGTTCGAGAAGG--------TAAGAGGCTTTTT------CCGCCCCTGCCCG--------------------------TGTGCGGTGCCGCTGCGCA--------CAGCCCGTCTTATCTCCCG--CCCCGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTT-----GCGACCGGCGTCA---------GGCCGATGCG----CCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Diplodia_cupressi_CBS_261_85 AGTTCGAGAAGG--------TAAGAGGCTTTTT------CCGCCCCTGCCCG--------------------------TGTGCGGTGCCGCTGCGCA--------CAGCCCGTCTTATCTCCCG--CCCCGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTT-----GCGACCGGCGTCA---------GGCCGATGCG----CCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Diplodia_mutila_95_223 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCCGCTCCCGCACG--------------------------TGTGCAGTGCTGCTGCTGCTGCTGCTGCTGCTGCGCTTATCTGCCG--CCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTT-----GCGACCGGTGTGA---------GGCCGATGCG---CCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Diplodia_mutila_95_2232 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCCGCTCCCGCACG--------------------------TGTGCAGTGCTGCTGCTGCTGCTGCTGCTGCTGCGCTTATCTGCCG--CCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTT-----GCGACCGGTGTGA---------GGCCGATGCG---CCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Diplodia_mutila_CBS_112553_AY573219 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCCGCTCCCGCACG--------------------------TGTGCAGTGCTGCTGCTGCTGCTGCTGCTGCTGCGCTTATCTGCCG--CCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTT-----GCGACCGGTGTGA---------GGCCGATGCG---CCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Diplodia_mutila_CBS_230_30_DQ458869 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCCGCTCCCGCACG--------------------------TGTGCAGTGCTGCTGCTGCTGCTGCTGCTGCTGCGCTTATCTGCCG--CCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTT-----GCGACCGGTGTGA---------GGCCGATGCG---CCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGT Diplodia_scrobiculata_CBS_109944 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCTGCTCCCGCACTG-------------------------CGTGCA---------------------CAGCCCACCTTATCGCTCG-------GTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGGTTTTT----GCGACCGGCGGCA---------GGCCGATGCG----CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACA-GGAAGCCGCCGAGCTCGGTAAGGGT Diplodia_scrobiculata_CBS_113423 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCTGCTCCCGCACTG-------------------------CGTGCA---------------------CAGCCCACCTTATCGCTCG-------GTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGGTTTTT----GCGACCGGCGGCA---------GGCCGATGCG----CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACA-GGAAGCCGCCGAGCTCGGTAAGGGT Diplodia_seriata_11_219 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCCGCTCCCGCACTG-------------------------CGTGCA---------------------CAGCCCACCTTATCGCTCG-------GTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTTT----GCGACCGGCGTCA---------GGCCGATGCG----CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACA-GGAAGCCGCCGAGCTCGGTAAGGGT Diplodia_seriata_11_2192 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCCGCTCCCGCACTG-------------------------CGTGCA---------------------CAGCCCACCTTATCGCTCG-------GTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTTT----GCGACCGGCGTCA---------GGCCGATGCG----CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACA-GGAAGCCGCCGAGCTCGGTAAGGGT Diplodia_seriata_16 AGTTCGAGAAGG--------TAAGAGCATTTTT-----CCCGCTCCCGCACTG-------------------------CGTGCA---------------------CAGCCCACCTTATCGCTCG-------GTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTTT----GCGACCGGCGTCA---------GGCCGATGCG----CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACA-GGAAGCCGCCGAGCTCGGTAAGGGT Diplodia_seriata_163_220 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCTGCTCCCGCACCG-------------------------CGTGCA---------------------CAGCCCACCTTATCGCTCG-------GTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTTT----GCGACCGGCGTCA---------GGCCGATGCG----CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACA-GGAAGCCGCCGAGCTCGGTAAGGGT Diplodia_seriata_163_2202 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCTGCTCCCGCACCG-------------------------CGTGCA---------------------CAGCCCACCTTATCGCTCG-------GTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTTT----GCGACCGGCGTCA---------GGCCGATGCG----CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACA-GGAAGCCGCCGAGCTCGGTAAGGGT Diplodia_seriata_CBS_112555 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCCGCTCCCGCACTG-------------------------CGTGCA---------------------CAGCCCACCTTATCGCTCG-------GTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTTT----GCGACCGGCGTCT---------GGCCGATGCG----CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACA-GGAAGCCGCCGAGCTCGGTAAGGGT Diplodia_seriata_CBS_119049 AGTTCGAGAAGG--------TAAGAGGATTTTT-----CCCGCTCCCGCACTG-------------------------CGTGCA---------------------CAGCCCACCTTATCGCTCG-------GTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTAAACCTCGTCTGAGC-TCGGCAAACTGGCCGCACTT-GGTTTTTT----GCGACCGGCGTCT---------GGCCGATGCG----CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACA-GGAAGCCGCCGAGCTCGGTAAGGGT Dothio_sarmentorum_CBS_115038 AGTTCGAGAAGG--------TAAGAAACTTTTCC----------------------------------------------------GCTCCTTCACACCCACCTGACATTTGCCTTG----TCG--CTCTGGTGAGGGGCATTTTCGATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGCTTCGGCAAAATCTCCACATTT-GATTTTTCCTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGCGCGTCCCTCACCAAAAAC-----TTTGAGCCACTCA-----------GCGATCAGCTGCTAATGCCTGCTGCA----GGAAGCCGCCGAGCTCGGTAAGGGT Dothio_sarmentorum_IMI_63581b AGTTCGAGAAGG--------TAAGAAACTTTTCC----------------------------------------------------GCTCCTTCACACCCACCTGACATTTGCCTTG----TCG--CTCTGGTGAGGGGCATTTTCGATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGCTTCGGCAAAATCTCCACATTT-GATTTTTCCTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGCGCGTCCCTCACCAAAAAC-----TTTGAGCCACTCA-----------GCGATCAGCTGCTAATGCCTGCTGCA----GGAAGCCGCCGAGCTCGGTAAGGGT Dothiorella_iberica_221 AGTTCGAGAAGG--------TAAGAAACTTTTTT----------------------------------------------------GCTCCTTCACACCCACCTGACATTTGCCTCG----TCG--CTCTGGTGAGGGGCATTTTCGATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGCTTCGGCAAAATCTCCACATTT-GATTTTTCCTTTGCGCCCGGTGTCA---------CCCCGATGCGCGCGTCCCTCACCAAAAAC-----TCTGAGCCACTCA-----------GCGATCAGCTGCTAATGCCTGCTGCA----GGAAGCCGCCGAGCTCGGTAAGGGT Dothiorella_iberica_CBS_113188 AGTTCGAGAAGG--------TAAGAAACTTTTTT----------------------------------------------------GCTCCTTCACACCCACCTGACATTTGCCTCG----TCG--CTCTGGTGAGGGGCATTTTCGATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGCTTCGGCAAAATCTCCACATTT-GATTTTTCCTTTGCGCCCGGTGTCA---------CCCCGATGCGCGCGTCCCTCACCAAAAAC-----TCTGAGCCACTCA-----------GCGATCAGCTGCTAATGCCTGCTGCA----GGAAGCCGCCGAGCTCGGTAAGGGT Dothiorella_iberica_CBS_115041 AGTTCGAGAAGG--------TAAGAAACTTTTTT----------------------------------------------------GCTCCTTCACACCCACCTGACATTTGCCTCG----TCG--CTCTGGTGAGGGGCATTTTCGATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGCTTCGGCAAAATCTCCACATTT-GATTTTTCCTTTGCGCCCGGTGTCA---------CCCCGATGCGCGCGTCCCTCACCAAAAAC-----TCTGAGCCACTCA-----------GCGATCAGCTGCTAATGCCTGCTGCA----GGAAGCCGCCGAGCTCGGTAAGGGT Fusicoccum_fabicercianum_CMW27094 AGTTCGAGAAGG--------TAAGCACGCTTTTT----CTATGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCACTCTCTGGTGAGGGGCAATTT-CTTGGTGGGGCT-GGCC-CGCGCTAAGCCTCGTTTGGTCTTCGGCAAAATCTCCGCATCT-GGATTTTTT---GTGACCGGCGTGC---------GACCGACGCGAACACCCCTCACCAATGC------TTCCAGCCACTCACGTCCGTCTGTGCGACCATATGCTAACCGCCGCCACAACA-GGAAGCCGCTGAGCTTGGCAAGGGT Fusicoccum_fabicercianum_CMW27121 AGTTCGAGAAGG--------TAAGCACGCTTTTT----CTATGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCACTCTCTGGTGAGGGGCAATTT-CTTGGTGGGGCT-GGCC-CGCGCTAAGCCTCGTTTGGTCTTCGGCAAAATCTCCGCATCT-GGATTTTTT---GTGACCGGCGTGC---------GACCGACGCGAACACCCCTCACCAATGC------TTCCAGCCACTCACGTCCGTCTGTGCGACCATATGCTAACCGCCGCCACAACA-GGAAGCCGCTGAGCTTGGCAAGGGT Fusicoccum_ramosum_CMW26167 AGTTCGAGAAGG--------TAAGCACACTTTTT----CTATGCCT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCA--CTCTGGTGAGGGGCAATTT-CTTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTTGGCCTTCGGCAAAATCTCCGCATCT-GGATTTTTTTTGGAGGCCGGCGTGC---------GACCGACGCGAACACCCCTCACCAACGC------ATCCAACCACTCACGTTCGCCGATGCGACCATACGCTAACCACCGCCACAACA-GGAAGCCGCCGAGCTCGGCAAGGGT Guignardia_philoprina_CMW7063 AGTTCGAGAAGG--------TAAGAACAGCCACTCCTTTGATACCCAGATCGTGCGGCGTCTCGCATCTCACACCTGGCATTCTGTGCCCCT?T-----------TACCCCTCCTCAAAAATCAATTTTTTTTGTGGCCCTTTTT----AGTGGGGCCACAAC-CCCGCCAGAGTTC---------TCGATAGCATCTCAA----------------------------------------GGAAGGCACG---------------------------------------------------------CGCTGACAGTC-CCAAAATA-GGAAGCCGCCGAACTCGGTAAGGGT Lasiodiplodia_citricola_61_206 AGTTCGAGAAG---------TGAGTGAAGATTTTC---CCCAACCCCGCTTGGC------------------------TCTGCAGCGCTGCGGCGCA--------CAGTCCGCCCTA----TCG--CTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTA-GCCTCGTCTGGGT-TCGGCAAAATGACCGCACTTGGGTTTTTTT---GCGACCGGCGTCT---------GGCCGACGCG---CCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTACCGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGT Lasiodiplodia_citricola_61_2062 AGTTCGAGAAG---------TGAGTGAAGATTTTC---CCCAACCCCGCTTGGC------------------------TCTGCAGCGCTGCGGCGCA--------CAGTCCGCCCTA----TCG--CTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTA-GCCTCGTCTGGGT-TCGGCAAAATGACCGCACTTGGGTTTTTTT---GCGACCGGCGTCT---------GGCCGACGCG---CCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTACCGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGT Lasiodiplodia_citricola_IRAN1521C_GU945339 AGTTCGAGAAG---------TGAGTGAAGATTTTC---CCCAACCCCGCTTGGC------------------------TCTGCAGCGCTGCGGCGCA--------CAGTCCGCCCTA----TCG--CTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTA-GCCTCGTCTGGGT-TCGGCAAAATGACCGCACTTGGGTTTTTTT---GCGACCGGCGTCT---------GGCCGACGCG---CCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTACCGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGT Lasiodiplodia_citricola_IRAN1522C_GU945340 AGTTCGAGAAG---------TGAGTGAAGATTTTC---CCCAACCCCGCTTGGC------------------------TCTGCAGCGCTGCGGCGCA--------CAGTCCGCCCTA----TCG--CTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTA-GCCTCGTCTGGGT-TCGGCAAAATGACCGCACTTGGGTTTTTTT---GCGACCGGCGTCT---------GGCCGACGCG---CCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTACCGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGT Lasiodiplodia_parva_CBS_456_78_EF622063 AGTTCGAGAAG---------TGAGTGAAGATTTTC---CCCAACCCCGCCTGGC------------------------TCTGCAGCGCTGCGGCGCA--------CAGTCCGCCTTA----TCG--CTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTA-GCCTCGTCTGGGT-TCGGCAAAATGACCGCACTT-GGTTTTTTT---GCGACCGGCGTCT---------GGCCGACGCG---CCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTACCGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGTAAGGGT Lasiodiplodia_parva_CBS_494_78_EF622064 AGTTCGAGAAG---------TGAGTGAAGATTTTC---CCCAACCCCGCCTGGC------------------------TCTGCAGCGCTGCGGCGCA--------CAGTCCGCCTTA----TCG--CTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTA-GCCTCGTCTGGGT-TCGGCAAAATGACCGCACTT-GGTTTTTTT---GCGACCGGCGTCT---------GGCCGACGCG---CCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTACCGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGTAAGGGT Lasiodiplodia_pseudotheobromae_CBS_116459 AATTCGAGAAG---------TTCGTGATTTCCCCCCCTCCCAACCCCGCTTGGC------------------------TCTGTAGCGCTGCGGCGCA--------CAGTCCGCCTTA----TCG--CTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTA-GCCTCGTCTGGGT-TCGGCAAAATGACCGCACTT-GGTTTTTTT---GCGACCGGCGTCT---------GGCCGACGCG---CCTCCCCACTAGCGAAAAATGCTCTGGCCACTCATGTACCGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGTAAGGGT Lasiodiplodia_pseudotheobromae_CBS_447_62 AATTCGAGAAG---------TTCGTGATTTCCCCCCCTCCCAGCCCCGCTTGGC------------------------TCTGTAGCGCTGCGGCGCA--------CAGTCCGCCTTA----TCA--CTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTA-GCCTCGTCTGGGT-TCGGCAAAATGACCGCACTT-GGTTTTTTT---GCGACCGGCGTCT---------GGCCGACGCG---CCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTACCGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGTAAGGGT Lasiodiplodia_theobromae_CBS_124_13 AGTTCGAGAAGGTCCGTGCACGCATGTCGTTTTTTAACCCCTCTCGACTTCGGC------------------------GCTGCAGCGCTGCGGCGCA--------CAGTCCGCCTTA----TCG--CTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTA-GCCTCGTCTGGGT-TCGGCAAAATGACCGCACTT-GGTTTTTTT---GCGACCGGCGTCT---------GGCCGACGCG---CCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTACCGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGTAAGGGT Lasiodiplodia_theobromae_CBS_164_96 AGTTCGAGAAGGTCCGTGCACGCATGTCGTTTTTTAACCCCTCTCGACTTCGGC------------------------GCTGCAGCGCTGCGGCGCA--------CAGTCCGCCTTA----TCG--CTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC-CGCGCTA-GCCTCGTCTGGGT-TCGGCAAAATGACCGCACTT-GGTTTTTTT---GCGACCGGCGTCT---------GGCCGACGCG---CCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTACCGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGTAAGGGT Neofusicoccum_andinum_CBS117453_PD252 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-ACACGC---------------------GCTGGGTTCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTCCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-TGCGCTAAGCCTTGTTTGGGC-TCGGCAAAATCTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAATGGCCATC---CCA-GGAAGCCGCCGAGCTCGGCAAGGGT Neofusicoccum_arbuti_CBS_116131_PD282 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-ACACGC---------------------GCTGGGTTCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTCCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GACC-TGCGCTAAGCCTTGTTTGGGC-TCGGCAAAATCTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAATGGCCATC---CCA-GGAAGCCGCCGAGCTCGGCAAGGGT Neofusicoccum_arbuti_PD281_GU251283 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-ACACGC---------------------GCTGGGTTCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTCCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GACC-TGCGCTAAGCCTTGTTTGGGC-TCGGCAAAATCTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAATGGCCATC---CCA-GGAAGCCGCCGAGCTCGGCAAGGGT Neofusicoccum_mediterraneum_18_222 AGTTCGAGAAGG--------TAAGAAAGCTTTTC----CTTCCGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-CGCGCTAAGCCTTGTTTGTGCTTCGGCAAAATCTCCACATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAC-------TCACAGCCGCACGT----------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_mediterraneum_18_2222 AGTTCGAGAAGG--------TAAGAAAGCTTTTC----CTTCCGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-CGCGCTAAGCCTTGTTTGTGCTTCGGCAAAATCTCCACATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAC-------TCACAGCCGCACGT----------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_mediterraneum_3_175 AGTTCGAGAAGG--------TAAGAAAGCTTTTC----CTTCCGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-CGCGCTAAGCCTTGTTTGTGCTTCGGCAAAATCTCCACATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAC-------TCACAGCCGCACGT----------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_mediterraneum_3_1752 AGTTCGAGAAGG--------TAAGAAAGCTTTTC----CTTCCGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-CGCGCTAAGCCTTGTTTGTGCTTCGGCAAAATCTCCACATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAC-------TCACAGCCGCACGT----------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_mediterraneum_34_169 AGTTCGAGAAGG--------TAAGAAAGCTTTTC----CTTCCGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-CGCGCTAAGCCTTGTTTGTGCTTCGGCAAAATCTCCACATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAC-------TCACAGCCGCACGT----------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_mediterraneum_34_1692 AGTTCGAGAAGG--------TAAGAAAGCTTTTC----CTTCCGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-CGCGCTAAGCCTTGTTTGTGCTTCGGCAAAATCTCCACATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAC-------TCACAGCCGCACGT----------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_mediterraneum_9_157 AGTTCGAGAAGG--------TAAGAAAGCTTTTC----CTTCCGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-CGCGCTAAGCCTTGTTTGTGCTTCGGCAAAATCTCCACATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAC-------TCACAGCCGCACGT----------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_mediterraneum_9_1572 AGTTCGAGAAGG--------TAAGAAAGCTTTTC----CTTCCGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-CGCGCTAAGCCTTGTTTGTGCTTCGGCAAAATCTCCACATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAC-------TCACAGCCGCACGT----------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_mediterraneum_CBS_121718_PD312 AGTTCGAGAAGG--------TAAGAAAGCTTTTC----CTTCCGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-CGCGCTAAGCCTTGTTTGTGCTTCGGCAAAATCTCCACATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAC-------TCACAGCCGCACGT----------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGCAAGGGT Neofusicoccum_mediterraneum_PD9_GU251312 AGTTCGAGAAGG--------TAAGAAAGCTTTTC----CTTCCGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-CGCGCTAAGCCTTGTTTGTGCTTCGGCAAAATCTCCACATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAC-------TCACAGCCGCACGT----------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGCAAGGGT Neofusicoccum_nonquaesitum_29_167 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-ACACGC---------------------GCTGGGTTCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-TGCGCTAAGCCTTGTTTGGGC-TCGGCAAAATCTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCAACCAGACGCTAATGGCCATC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_nonquaesitum_29_1672 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-ACACGC---------------------GCTGGGTTCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-TGCGCTAAGCCTTGTTTGGGC-TCGGCAAAATCTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCAACCAGACGCTAATGGCCATC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_nonquaesitum_PD484_GU251295 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-ACACGC---------------------GCTGGGTTCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-TGCGCTAAGCCTTGTTTGGGC-TCGGCAAAATCTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCAACCAGACGCTAATGGCCATC---CCA-GGAAGCCGCCGAGCTCGGCAAGGGT Neofusicoccum_nonquaesitum_PD90_GU251289 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-ACACGC---------------------GCTGGGTTCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-GGCC-TGCGCTAAGCCTTGTTTGGGC-TCGGCAAAATCTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCAACCAGACGCTAATGGCCATC---CCA-GGAAGCCGCCGAGCTCGGCAAGGGT Neofusicoccum_parvum_177_215 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACGGCCCTC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_parvum_177_2152 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACGGCCCTC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_parvum_184 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACGGCCCTC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_parvum_209 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACGGCCCTC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_parvum_211 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACGGCCCTC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_parvum_6_214 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACAGCCATC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_parvum_6_2142 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACAGCCATC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_parvum_84_178 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCG{CT}TAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACAGCCATC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_parvum_84_1782 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCG{CT}TAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACAGCCATC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_parvum_CMW9080_AY236887 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACAGCCATC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_parvum_CMW9081_AY236888 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC--------------GCTGGGTGCCAGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTTGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACAGCCATC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_ribis_CMW7772_AY236877 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGCGCTGGGTGCTGGGTGCTGGGTGCTGGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTCGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CACCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACGGCCATC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_ribis_CMW7773_AY236878 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGCGCTGGGTGCTGGGTGCTGGGTGCTGGGTGCTGGGTTCCCGCACT--------CAATTTGCCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAAGCCTCGTTCGGGC-TCGGCAAAATGTCCGCATCT-GGTTTTTTT---GCGACCGGCGTGC---------GACCGAAGCG--CACCCCTCGCCAG----------ACACGCCACGCATGT--------GCGACCAGACGCTAACGGCCATC---CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_viticlavatum_STE_U5041 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC-------------------ACGCCGGGTACTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCCGTGAGGGGCATTTT-GTTGGTGGGGTA-GGCC-CGCGCTAAGCCTCGTTTGTGCTTCGGCAAAATCTCCGCATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAT-------TCGCAGCCACACGTGT--------GCGACCGGACGCTGACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_viticlavatum_STE_U5044 AGTTCGAGAAGG--------TAAGAAAGTTTTTC----CTTCCGCT-GCACGC-------------------ACGCCGGGTACTGGGTTGCCGCACT--------CAATTTGTCTTA----TCG--CTTCCGTGAGGGGCATTTT-GTTGGTGGGGTA-GGCC-CGCGCTAAGCCTCGTTTGTGCTTCGGCAAAATCTCCGCATCT-GGTTTTTT----GCGACCGGCGTGC---------GACCGAAGCG--CGCCCCTCGCCAGAT-------TCGCAGCCACACGTGT--------GCGACCGGACGCTGACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_vitifusiforme_32_109 AGTTCGAGAAGG--------TAAGAAAGTTTTTC--------CGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCGCT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-AGCC-CGCGCTAAGCCTCGTTTGCGCTTCGGCAAAATCTCCGCATCT-GGTTTTTT----GCGACCGGCGTGC---------GGCCGAAGCG--CGCCCCTCGCCAGAC-------TCGCAGCCACACATGT--------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_vitifusiforme_32_1092 AGTTCGAGAAGG--------TAAGAAAGTTTTTC--------CGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCGCT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-AGCC-CGCGCTAAGCCTCGTTTGCGCTTCGGCAAAATCTCCGCATCT-GGTTTTTT----GCGACCGGCGTGC---------GGCCGAAGCG--CGCCCCTCGCCAGAC-------TCGCAGCCACACATGT--------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_vitifusiforme_STE_U5050 AGTTCGAGAAGG--------TAAGAAAGTTTTTC--------CGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCGCT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-AGCC-CGCGCTAAGCCTCGTTTGCGCTTCGGCAAAATCTCCGCATCT-GGTTTTTT----GCGACCGGCGTGC---------GGCCGAAGCG--CGCCCCTCGCCAGAC-------TCGCAGCCACACATGT--------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neofusicoccum_vitifusiforme_STE_U5252 AGTTCGAGAAGG--------TAAGAAAGTTTTTC--------CGCT-GCACGC-------------------ACGCTGGGTGCTGGGTTGCCGCGCT--------CAATTTGTCTTA----TCG--CTTCGGTGAGGGGCATTTT-GGTGGTGGGGTC-AGCC-CGCGCTAAGCCTCGTTTGCGCTTCGGCAAAATCTCCGCATCT-GGTTTTTT----GCGACCGGCGTGC---------GGCCGAAGCG--CGCCCCTCGCCAGAC-------TCGCAGCCACACATGT--------GCGACCGGACGCTAACGACCA-----CCA-GGAAGCCGCCGAGCTCGGTAAGGGT Neoscy_dimidiatum_CBS499_66 AGTTCGAGAAGG--------TAAGCAAACTTTTTTCCGCCACCACT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCG--CTTGGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCA-GGATTTTTT---GCGACCGGCGTGC---------GACCGACACG--CGCCTCCTAGCGTCGC------TTGCAGCCACTCACGTCCGCCCGCGCAATCAGATGCTAACCGACACCATAACA-GGAAGCCGCTGAACTCGGCAAGGGT Neoscy_novaehollandiae_CMW26169 AGTTCGAGAAGG--------TAAGCAAACTTTTTTCCGCCACCACT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCG--CTTGGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAGGCCTCGTTCGGTCCTCGGCAAAATCTCCGCATCA-GGATTTTTT---GCGACCGGCGTGC---------GACCGACACG--CGCCTCCTAGCGTCGC------TTGCAGCCACTCACGTTCGCCCGCGCGATCAGATGCTAACCGCCACCATAACA-GGAAGCCGCTGAACTCGGCAAGGGT Neoscy_novaehollandiae_CMW26170 AGTTCGAGAAGG--------TAAGCAAACTTTTTTCCGCCACCACT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCG--CTTGGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAGGCCTCGTTCGGTCCTCGGCAAAATCTCCGCATCA-GGATTTTTT---GCGACCGGCGTGC---------GACCGACACG--CGCCTCCTAGCGTCGC------TTGCAGCCACTCACGTTCGCCCGCGCGATCAGATGCTAACCGCCACCATAACA-GGAAGCCGCTGAACTCGGCAAGGGT Neoscytalidium_dimidiatum_114 AGTTCGAGAAGG--------TAAGCAAACTTTTTTCCGCCACCACT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCG--CTTGGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCA-GGATTTTTT---GCGACCGGCGTGC---------GACCGACACG--CGCCTCCTAGCGTCGC------TTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAACCGCCACCATAACA-GGAAGCCGCTGAACTCGGTAAGGGT Neoscytalidium_dimidiatum_CBS_204_33 AGTTCGAGAAGG--------TAAGCAAACTTTTTTCCGCCACCACT-GCACGT--------------------------GTGCTGGGTTCCTGCGCC--------GAATTTGCCTTA----TCG--CTTGGGTGAGGGGCATTTT-GGTGGTGGGGTT-GGCC-CGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCA-GGATTTTTT---GCGACCGGCGTGC---------GACCGACACG--CGCCTCCTAGCGTCGC------TTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAACCGCCACCATAACA-GGAAGCCGCTGAACTCGGCAAGGGT ; END; [ The following blocks are output data for analysis step 12651 ] BEGIN TREES; TITLE File_2_Botryosphaeriaceae_TEF; LINK TAXA = TaxaForAnalysisStep12651; TREE PAUP_1 = [&R] (Guignardia_philoprina_CMW7063:0.541303015,((((Lasiodiplodia_theobromae_CBS_164_96:1.0E-8,Lasiodiplodia_theobromae_CBS_124_13:1.0E-8):0.06359716,((Lasiodiplodia_pseudotheobromae_CBS_116459:0.0036409,Lasiodiplodia_pseudotheobromae_CBS_447_62:0.00741538):0.04586654,((Lasiodiplodia_parva_CBS_456_78_EF622063:1.0E-8,Lasiodiplodia_parva_CBS_494_78_EF622064:1.0E-8):0.00359915,(Lasiodiplodia_citricola_61_2062:1.0E-8,(Lasiodiplodia_citricola_61_206:1.0E-8,(Lasiodiplodia_citricola_IRAN1522C_GU945340:1.0E-8,Lasiodiplodia_citricola_IRAN1521C_GU945339:1.0E-8):1.0E-8):1.0E-8):0.00769112):0.01697705):0.00941843):0.11484105,(((Diplodia_cupressi_CBS_168_87:1.0E-8,Diplodia_cupressi_CBS_261_85:1.0E-8):0.0305793,(Diplodia_mutila_95_2232:1.0E-8,(Diplodia_mutila_95_223:1.0E-8,(Diplodia_mutila_CBS_112553_AY573219:1.0E-8,Diplodia_mutila_CBS_230_30_DQ458869:1.0E-8):1.0E-8):1.0E-8):0.0528802):0.0075659,((Diplodia_scrobiculata_CBS_113423:1.0E-8,Diplodia_scrobiculata_CBS_109944:1.0E-8):0.01513248,((Diplodia_seriata_163_220:1.0E-8,Diplodia_seriata_163_2202:1.0E-8):0.00967418,(Diplodia_seriata_16:0.00412325,((Diplodia_seriata_CBS_112555:1.0E-8,Diplodia_seriata_CBS_119049:1.0E-8):0.00828746,(Diplodia_seriata_11_219:1.0E-8,Diplodia_seriata_11_2192:1.0E-8):0.0):1.0E-8):0.00266386):1.0E-8):0.03990101):0.0319449):0.21096337,(((Dothio_sarmentorum_IMI_63581b:1.0E-8,Dothio_sarmentorum_CBS_115038:1.0E-8):0.01016816,(Dothiorella_iberica_221:1.0E-8,(Dothiorella_iberica_CBS_115041:1.0E-8,Dothiorella_iberica_CBS_113188:1.0E-8):1.0E-8):0.0072363):0.22157344,(((Neoscytalidium_dimidiatum_114:1.0E-8,((Neoscy_dimidiatum_CBS499_66:0.00778753,Neoscytalidium_dimidiatum_CBS_204_33:1.0E-8):1.0E-8,(Neoscy_novaehollandiae_CMW26170:1.0E-8,Neoscy_novaehollandiae_CMW26169:1.0E-8):0.00775614):0.00386164):0.0973404,(Fusicoccum_ramosum_CMW26167:0.03719275,((Fusicoccum_fabicercianum_CMW27094:1.0E-8,Fusicoccum_fabicercianum_CMW27121:1.0E-8):0.02527325,(Botryosphaeria_dothidea_160_2082:1.0E-8,(Botryosphaeria_dothidea_160_208:1.0E-8,(Botryosphaeria_dothidea_CMW8000:1.0E-8,(Botryosphaeria_dothidea_CMW7780:0.00385759,(Botryosphaeria_dothidea_48_1132:1.0E-8,(Botryosphaeria_dothidea_48_113:1.0E-8,(Botryosphaeria_dothidea_10_117:1.0E-8,Botryosphaeria_dothidea_10_1172:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.01031064):0.00733949):0.07204204):0.06799165,(((Neofusicoccum_viticlavatum_STE_U5044:1.0E-8,Neofusicoccum_viticlavatum_STE_U5041:1.0E-8):0.0329325,((Neofusicoccum_vitifusiforme_32_1092:1.0E-8,(Neofusicoccum_vitifusiforme_32_109:1.0E-8,(Neofusicoccum_vitifusiforme_STE_U5252:1.0E-8,Neofusicoccum_vitifusiforme_STE_U5050:1.0E-8):1.0E-8):1.0E-8):0.01899041,((Neofusicoccum_mediterraneum_CBS_121718_PD312:1.0E-8,Neofusicoccum_mediterraneum_PD9_GU251312:1.0E-8):0.00411097,(Neofusicoccum_mediterraneum_34_1692:1.0E-8,(Neofusicoccum_mediterraneum_34_169:1.0E-8,(Neofusicoccum_mediterraneum_9_1572:1.0E-8,(Neofusicoccum_mediterraneum_9_157:1.0E-8,(Neofusicoccum_mediterraneum_18_2222:1.0E-8,(Neofusicoccum_mediterraneum_18_222:1.0E-8,(Neofusicoccum_mediterraneum_3_175:1.0E-8,Neofusicoccum_mediterraneum_3_1752:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.02381158):0.0):0.04024423,(((Neofusicoccum_andinum_CBS117453_PD252:1.0E-8,(Neofusicoccum_arbuti_CBS_116131_PD282:1.0E-8,Neofusicoccum_arbuti_PD281_GU251283:1.0E-8):0.00423939):0.0042027,((Neofusicoccum_nonquaesitum_PD484_GU251295:1.0E-8,Neofusicoccum_nonquaesitum_PD90_GU251289:1.0E-8):0.0,(Neofusicoccum_nonquaesitum_29_167:1.0E-8,Neofusicoccum_nonquaesitum_29_1672:1.0E-8):0.00422238):0.00430121):0.0298157,((Neofusicoccum_ribis_CMW7772_AY236877:1.0E-8,Neofusicoccum_ribis_CMW7773_AY236878:1.0E-8):0.00830291,((Neofusicoccum_parvum_209:1.0E-8,(Neofusicoccum_parvum_211:1.0E-8,(Neofusicoccum_parvum_184:1.0E-8,(Neofusicoccum_parvum_177_215:1.0E-8,Neofusicoccum_parvum_177_2152:1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00419262,(Neofusicoccum_parvum_CMW9081_AY236888:1.0E-8,(Neofusicoccum_parvum_CMW9080_AY236887:1.0E-8,(Neofusicoccum_parvum_6_214:1.0E-8,(Neofusicoccum_parvum_6_2142:1.0E-8,(Neofusicoccum_parvum_84_178:1.0E-8,Neofusicoccum_parvum_84_1782:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00405769):0.00828864):0.0068211):0.02210824):0.0843179):0.05407632):2.311E-5):0.541303015); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr68978] END;