#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 13, 2024; 16:47 GMT TreeBASE (cc) 1994-2008 Study reference: Simmons M., Randle C., Freudenstein J., & Wenzel J. 2002. Limitations of Relative Apparent Synapomorphy Analysis (RASA) for measuring phylogenetic signal. Molecular Biology and Evolution, 19(1): 14-23. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S795] [ The following blocks are input data for analysis step 1270 ] BEGIN TAXA; TITLE TaxaForAnalysisStep1270; DIMENSIONS NTAX=20; TAXLABELS Acorus Alstroemeria Anigozanthus Canna Catopsis Curculigo Eriocaulon Flagellaria Gymnostachys Nypa Oryza Piper Saruma Smilax Symplocarpus Tacca Trillium Vellozia Veratrum Xanthorroea ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M198] TITLE rbcL_characters_for_first_and_second_codon_positions; LINK TAXA = TaxaForAnalysisStep1270; DIMENSIONS NCHAR=932; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Acorus ?TGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGACCGTGTGGGACAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGTTGAGACTCGATCCCCGCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTCTTTTGGCGAGCTTTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAGAGGCCATGGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCATTATGCGAAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCCTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTCTCGGAGATAATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTTTCCGTGCTCGGGGATCAGTTGCAATCCGCTTACGAAATTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAAGACCAATATCGGAGCTGAATGAG???????????????????????????????????????????????? Alstroemeria GCGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGATACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGAACGTATGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGTTGAGACTCGATCCCCGCTATCAAACTTCAGGCCCCCAGGATCAGTGACGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGCGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCCTTTAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGTCCATATATCAGATAATACGGGGTTACGCAAACAGTTGCTATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATTATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTTTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGGAGCAGGATGAGCCGACTGCGCGCTGGAGTTGAAGAATAATTGATTGACCGCGAAAGGGA Anigozanthus GCGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGACCGTCTGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGTTGAGATTCGATCCACTCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCATTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCATCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATAATGAAAGACGAGCGGGATTTTTACCAGATGCTTCATCCGGGTCTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTTTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGATGAATATCGGAGCGCAATGAGCCGACTGCGCGCTGGAGTTGAAGAATAATTGATTGACCGTGAAACTGA Canna GTGGTTAAGCGGGTAAGATAAATTACTATAACCCGATACAGTAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACGATGACGGTGTGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCTTCGGCCTCGCTGAGACTCGATCCCCGCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAAATGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTCGCGAGCATTTAATCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATTATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATAATGAAAGACGAGCGGGATTCTTACCAGATGGTTCATCCGGGTATCCGTGCTCAGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGATGTGCAAAGGTGCTTGAGCTGGTCAG??GAAGAGGCGGACTGCCATAGGAAGAATATCGGAGCAGAATGAGCCTACTGCGC?????????????????????????????????????? Catopsis ??GGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGAGTGTACAATGACCGTGTGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCACTCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAATTTAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTGTTTTGGCGAGCATTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCATTTGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATTATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTATCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGGCGAATATCGGAGCAGAATGAGCCGACTGCGCGCTGGAGTTGAAGAATAATTGATTGACCGTGAAACTGA Curculigo GTGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGAGCGTATGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCCCGCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCATTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGATTGGAGAATATAAAGGCGCTGGCAGGATTGGGTCCATATATCAGATATTACGGGGTTACGCAAACACTTGCATTATGCGGAAAGGTTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAGTCAGGGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATAATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTTTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACATGGCACCTGGGAAGCCCGGGCGTGCAAAGGTGCTCGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAAAATATCGGAGCAGAATGAGCCGACTGCGCGCTGGAGTTGAAGAATAATTGATAGAGAGTGAAACCGA Eriocaulon GCGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCGCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACATTGACCGTGTGGGAGAAACATAATGCTAATGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCTTCGGCCTCGTTGAGATTCGATCCCCGCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGTTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCATTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGTCCATGTATCAGATAATACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATTATGAAAGACGGCCGGGATTTTTACCAGATGGTTCATCCGGGTATCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTCGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGCGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGGAGCTGAATGAG???????????????????????????????????????????????? Flagellaria GTGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGACCGTGTGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCACTCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCTTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCCTTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATCTAAAGGCACTGGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTCTGAAGCAAAAACAGGATCATTCGGTCTGCAAGCATCGATTCGGGGGACAGTCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATTATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTCTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGCAGCTGAATGAGCCGACTGCGCGCTGGAGTTGAAGCATAATTGATTGCCCGTGAACATGA Gymnostachys ?CGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTAAAATGAGCCTGTGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCTTCGGCCTCGCTGAGACTCGATCCCCGCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTCTTTTGGCGAGCTTTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGCCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCTATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATAATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTCTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTCGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGGAGCAGAATGAGCCGACTGCGCGCTGGAGTTGAAGAATAATTGATTG????????????? Nypa GCGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGAACGTGTGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCCCTCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGACGAGCATTAAAGCCAACGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCATTTGCAGGATTGGGTCCATATATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGGGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATTATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTATCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTTTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGGAGCAGAATGAGCCGACTGCGCGCTGGAGTTGAAGAATAATTGATT?????????????? Oryza GTGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGACCGTGTGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCCCACTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCTTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCTGTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTGTTTTGGCGAGCATTAAATCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTTTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAATTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATTATGAAAGACGGCCGGGATTTTTACCAGATGGTTCATCCGGGTATCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTTTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGCGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGTCGCTGAATGAGCCGACTGCGCGCTGGAATTGAAGCATAATTGATTGACCGTGAAACTGA Piper GTGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGACCGTGCGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGATTCGATCCACTCTAATAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCATTAAAGCGAGCGAACGGGAATAAGGCATACTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGCCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTCTCGGAGATTATGAAAGACGAGCGGGATTATTACCAGATGGTTCTTCCGGGTCTCCGTGCTCGGGGATCAGTTGCAATCCTCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGCAGGAAGAATATCGGAGCAGAATG?????????????????????????????????????????????????? Saruma GTGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACTTGCACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGACCGTGCGGGAGAAGCATTATGCTAGTGCTACCCTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCCCGCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCATTAAATCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTTTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTCTCGGAGATTATGAAAGACGAGCGGGATTATTACCAGATGGTTCCTCCGGGTCTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAAAGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAGTATCGGAGCGCAATGAGCCGACTGCGCGCTGGAATTGAAGAATAATTGATTGAGCATGAACTTTA Smilax GTGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGAAGGTATGGGAGAGACATTATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGATTCGATCCACGCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCCTTTAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTCTCGGAGATTGTGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTTTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGGCGCTGAATGAGCCGACTGCGCGCTGGAGTTGAAGAATAATTGATTGACCGTGAAACTGA Symplocarpus GTGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACGCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGAGCATGTGGGAGAAACATTATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCTTCGGCCTCGCTGAGACTCGATCCCCGCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCATTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGACCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCATCGGACGTGTGGAACTGAGGGACGGGATACTTGGTTGTGATTTTCGGAGATAATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTCTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTCGAGCTGGTCAGCCGAAGAGGCGGACTGCGTGAGGAACAATATCGGAGCAGAATGAG???????????????????????????????????????????????? Tacca GTGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTAGCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTAACGTAAAGGCGTGTACAATGAAGGTGCGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCACTCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTGTTTTGGCGAGCCTTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGCCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTCTCGGAGATAATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTATCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGGAGCAGAATGAGCCGACTGCGCGCTGGAGTTGAAGAATAATTGATTAACCGTGAACCTGA Trillium GCGGTTAAGCGGGTAAGATAAATTACTATAACCCGATAACCCAAGAACGAATTTGCGCTTCGGTGCCCCACCGGGTCCGCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGAAGGTGCGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCCCGCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCATTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGCTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTCTCGGAGAGTGTTTAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTCTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGGAGCTGAATGAGCCGACTGCGCGCTGGAGTTGAAG????????????????????????? Vellozia ???????????GGTAAGATAAATTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGAAGGTGTGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCGTTCTAATAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCTTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTTTTTTGGCGAGCATTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGCCCATGTATCAGATACTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCATCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTCTCGGAGATTATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTCTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAACATATCGGAGCAGAATGAGCCGACTGCGCGCTGGAGTTGAAGAATAATTGATTGACCGTGAAATTGA Veratrum ??????????????????????TTTCTATAACCCGATAAAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGTAAAGGCGTGTACAATGAAGGTGTGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCACTCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTGTTTTGGCGAGCATTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCCATTGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCTTCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTCTCGGAGATTATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTCTCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGGAGCTGAATGAGCCGACTGCGCGCTGGAGTTGAAGCATAATTGATTGACCGTGAAAATGA Xanthorroea GTGGTTAAGCGGGTAAGATAAGTTACTATAACCCGATAGAACAAGAACGAATTTGCGCTTCGGTACCCCACCGGGTCCCCGAGAGCGGGCGCGTGCGCGATCTCACGGACTGACACGTTGACGAGGCTACAGCTGACGCAAAGGCGTGTACAATGAGCGTGTGGGAGAAACATAATGCTAGTGCTACCTTGACTTTGAGAGGTCGTACAAATTTACTCATGTGGAAGTTTGGTTAAGCCTCGGCCTCGCTGAGACTCGATCCCCTCTATCAAACTTCAGGCCCCCAGGATCAGTGAAGGAAATTAAAATAGGCGCCCTTTGGTGACATAACCAATTGGTTTCGCAAAATAGGAGGCGTTAGATGCTCGGGGGCTGATTACAAGAGAGAAAGTAATCCACCTTATCGTGAGGACGTTGTTTTGGCGAGCATTAAAGCCAGCGAACGGGAATAAGGCATATTAAGCACGCGGACTGGAGAATATAAAGGCGTTTGCAGGATTGGGTCCATGTATCAGATATTACGGGGTTACGCAAACAGTTGCCATATGCGGAAAGGCTCTCTCAATCACGGCATCAGCGTATGAAGCAAAAACAGGATCATTCGGTCTGCAAGCATCGATTCGGGGGACAATCAGCGGACGTGTGGAACTGAGGGACGGAATACTTGGTTGTGATTTTCGGAGATTATGAAAGACGAGCGGGATTTTTACCAGATGGTTCATCCGGGTATCCGTGCTCGGGGATCAGTTGCAATCCGCCTACGAATTTGGGAGATCGTCTCATTGGGGGGACTTGGCACCTGGGAAGCCCGGGCGTGCAACGGTGCTTGAGCTGGTCAGCCGAAGAGGCGGACTGCCGGAGGAAGAATATCGGAGCTGACTGAGCCGACTGCGCGCTGGAGTTGAAGCATAATTGATTGACCGTGAAAATGA ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = rbcL_characters_for_first_and_second_codon_positions) = N: 1-932; CODONPOSSET CodonPositions (CHARACTERS = rbcL_characters_for_first_and_second_codon_positions) = N: 1-932; END; [ The following blocks are output data for analysis step 1270 ] BEGIN TREES; TITLE Tb6046; LINK TAXA = TaxaForAnalysisStep1270; TREE Fig._x = [&R] (Saruma,(((((((Piper,Vellozia),Tacca),((Trillium,Smilax),Veratrum)),(((Alstroemeria,Nypa),((Xanthorroea,Flagellaria),(Eriocaulon,Oryza))),Catopsis)),Anigozanthus),(Acorus,Curculigo),(Gymnostachys,Symplocarpus)),Canna)); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr3927] END;