#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 05, 2024; 11:34 GMT

TreeBASE (cc) 1994-2008

Study reference:
Wynns J.T., & Asmussen-lange C. 2014. A comparison of 16 DNA regions for use as phylogenetic
markers in the pleurocarpous moss genus Plagiothecium (Hypnales). American
Journal of Botany, 101(4): 1-18.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S15161]

[ The following blocks are input data for analysis step 12905 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep12905;
        DIMENSIONS NTAX=25;
        TAXLABELS
            Herzogiella_seligeri_Denmark
            Isopterygiopsis_muelleriana_Scotland
            Plagiothecium_cavifolium_Denmark
            Plagiothecium_cavifolium_Denmark_B
            Plagiothecium_cavifolium_Germany
            Plagiothecium_curvifolium_Denmark
            Plagiothecium_curvifolium_Germany
            Plagiothecium_denticulatum_Denmark
            Plagiothecium_denticulatum_var_obtusifolium_Germany
            Plagiothecium_draytonii_HI_USA
            Plagiothecium_euryphyllum_Yunnan_China
            Plagiothecium_handelii_Yunnan_China
            Plagiothecium_laetum_Germany
            Plagiothecium_latebricola_Denmark
            Plagiothecium_neckeroideum_Yunnan_China
            Plagiothecium_nemorale_Germany
            Plagiothecium_nemorale_Iran
            Plagiothecium_nemorale_aquatic_Germany
            Plagiothecium_piliferum_WA_USA
            Plagiothecium_platyphyllum_Finland
            Plagiothecium_ruthei_Denmark
            Plagiothecium_succulentum_Denmark
            Plagiothecium_undulatum_Denmark
            Pseudotaxiphyllum_elegans_Germany
            Taxiphyllum_sp_Yunnan_China
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M20454]

	TITLE 'trnL-F Wynns & Asmussen Lange';
	LINK TAXA = TaxaForAnalysisStep12905;
	DIMENSIONS NCHAR=461;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                                               10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460 ]
[                                                                .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         . ]
Herzogiella_seligeri_Denmark                            GCTACGGACTTAAATAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTTGTTTGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTTAGTTTTTAGATATTAAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAATTATAATTTTTTATT-------------GACATAAA-------CTTCCAGTTTATGTTACGATAAGCCAATAAAAAA---AGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Isopterygiopsis_muelleriana_Scotland                    GCTACGGACTTGAATAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGCTGATAAAGATATAAGCAATCCTGAGCCAAATTTTATTTTGTTTGAAAATG---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATAATTTTAAAATTATTTAAAATTTATTTTTTAGATATTAAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTAGAATTTTTTATT-------------GACATAAA-------CTTTTGGTTTATGTTAGGATAGGTCAATCAAAAA---AGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_cavifolium_Denmark                        GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_cavifolium_Denmark_B                      GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_cavifolium_Germany                        GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_curvifolium_Denmark                       GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATGAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTTAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAAAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAACCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_curvifolium_Germany                       GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATGAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTTAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAAAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAACCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_denticulatum_Denmark                      GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATTTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATTATAATTTTTTATTGACATAAACTGGAGG-------TTTATGTTAGGATGAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_denticulatum_var_obtusifolium_Germany     GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATTTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATTATAATTTTTTATTGACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_draytonii_HI_USA                          GCTACGGACTTAAATAATTTGAGCGTTAGTAGAAAAATTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATGAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AGATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTTAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTCTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATAAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_euryphyllum_Yunnan_China                  GCTACGGACTTAAATAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATTTTATTTTGTTCGAAAATG---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTAAAAATTATTTAAAATTTATTTTTTAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATTTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGTAGG-------TTTATGTTACGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_handelii_Yunnan_China                     GCTACGGACTTAAATAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATGAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAGATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAGTAATATTTTCAAAATTATTTAAAACTTATTTTTTAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAA-------CTTCCAGTTTATGTTAGGATAAGCCAATTAAAAA---GGCCGGAATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_laetum_Germany                            GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTCTAAAATTATTTAAAATTGATTTTTTAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAAAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAACCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_latebricola_Denmark                       GCTACGGACTTAAACAATTTGAGCTTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATGAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAAAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_neckeroideum_Yunnan_China                 GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATGAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTTAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_nemorale_Germany                          GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTTAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_nemorale_Iran                             GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTTAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_nemorale_aquatic_Germany                  GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTTAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_piliferum_WA_USA                          GCTACGGACTTAAATAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATATTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTAAAATTTATTTAAAATTTATTTTTTAGATATTAAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAA-------CTTCCAGTTTATGTTAGGATAGGCCAATCAAAAA---GGCCGGAATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_platyphyllum_Finland                      GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATTTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATTATAATTTTTTATTGACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_ruthei_Denmark                            GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATTTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTTATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATTATAATTTTTTATTGACATAAACTGGAGG-------TTTATGTTAGGATGAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_succulentum_Denmark                       GCTACGGACTTAAACAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTTAAATTATTTAAAATTGATTTTTAAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Plagiothecium_undulatum_Denmark                         GCTACGGACTTAAATAATTTGAGCGTTAGTAGGAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATGAGCAATCCTGAGCCAAATCTTATTTCGTTCGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTTAAATTATTTAAAATTGATTTTTTAGATATTCAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTAGAATTTTCTATT-------------GACATAAACTGGAGG-------TTTATGTTAGGATAAGCCAATCAAAAA---GGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Pseudotaxiphyllum_elegans_Germany                       GCTACGGACTTAAATAATTTGAGCGTTAGTAGAAAAACTTACTAAATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTCGTTTGAAAATA---AAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTTATTTTTTAGATATTAAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATACTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAAG-------TTTATGTTAGAATAAGCCAA-CAAAAA---AGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
Taxiphyllum_sp_Yunnan_China                             GCTACGGACTTAAAAATTTTGAGCGTTAGTAGAAAAACTTACTAGATGCTAGCTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATCTTATTTCGTGTAAAAATAATAAAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTTAAATTATTCAAAATTTACTTTTTAGATATGAAACGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCCTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAACTATAATTTTTTATT-------------GACATAAACTGGAAG-------TTTGTGTTAGGATAAGCCAATAAAAAAAGAAGCCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC
;
END;

[ The following blocks are output data for analysis step 12905 ]
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_10 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,(((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):1.0,((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):2.0,Plagiothecium_latebricola_Denmark:1.0):1.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,Plagiothecium_handelii_Yunnan_China:5.0):2.0,Plagiothecium_euryphyllum_Yunnan_China:6.0):1.0,Plagiothecium_piliferum_WA_USA:4.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70084]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_19 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):2.0,Plagiothecium_latebricola_Denmark:1.0):1.0,(Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,(Plagiothecium_handelii_Yunnan_China:6.0,Plagiothecium_piliferum_WA_USA:4.0):1.0):2.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70093]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_16 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):2.0,((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,(Plagiothecium_handelii_Yunnan_China:6.0,Plagiothecium_piliferum_WA_USA:4.0):1.0):2.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70090]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_7 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,(Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):2.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):1.0,Plagiothecium_handelii_Yunnan_China:6.0):1.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,Plagiothecium_piliferum_WA_USA:4.0):3.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70081]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_4 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,(Isopterygiopsis_muelleriana_Scotland:7.0,Plagiothecium_euryphyllum_Yunnan_China:6.0):7.0):2.0,(((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):2.0,Plagiothecium_latebricola_Denmark:1.0):1.0,(Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,Plagiothecium_handelii_Yunnan_China:5.0):2.0,Plagiothecium_piliferum_WA_USA:4.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70078]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_6 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):1.0,((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):2.0,Plagiothecium_latebricola_Denmark:1.0):1.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):1.0,Plagiothecium_handelii_Yunnan_China:6.0):1.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,Plagiothecium_piliferum_WA_USA:4.0):3.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70080]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_17 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,(((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):1.0,((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):2.0,Plagiothecium_latebricola_Denmark:1.0):1.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,(Plagiothecium_handelii_Yunnan_China:6.0,Plagiothecium_piliferum_WA_USA:4.0):1.0):2.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70091]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_2 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,(Isopterygiopsis_muelleriana_Scotland:7.0,Plagiothecium_euryphyllum_Yunnan_China:6.0):7.0):2.0,((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):1.0,((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):2.0,Plagiothecium_latebricola_Denmark:1.0):1.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,Plagiothecium_handelii_Yunnan_China:5.0):2.0,Plagiothecium_piliferum_WA_USA:4.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70076]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_11 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,(((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,(Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):2.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,Plagiothecium_handelii_Yunnan_China:5.0):2.0,Plagiothecium_euryphyllum_Yunnan_China:6.0):1.0,Plagiothecium_piliferum_WA_USA:4.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70085]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_5 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,(((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):2.0,((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):1.0,Plagiothecium_handelii_Yunnan_China:6.0):1.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,Plagiothecium_piliferum_WA_USA:4.0):3.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70079]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_1 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,(Isopterygiopsis_muelleriana_Scotland:7.0,Plagiothecium_euryphyllum_Yunnan_China:6.0):7.0):2.0,(((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):2.0,((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,Plagiothecium_handelii_Yunnan_China:5.0):2.0,Plagiothecium_piliferum_WA_USA:4.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70075]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_12 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,((((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):2.0,Plagiothecium_latebricola_Denmark:1.0):1.0,(Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,Plagiothecium_handelii_Yunnan_China:5.0):2.0,Plagiothecium_euryphyllum_Yunnan_China:6.0):1.0,Plagiothecium_piliferum_WA_USA:4.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70086]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_9 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):2.0,((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,Plagiothecium_handelii_Yunnan_China:5.0):2.0,Plagiothecium_euryphyllum_Yunnan_China:6.0):1.0,Plagiothecium_piliferum_WA_USA:4.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70083]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_14 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,(((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):1.0,(((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):2.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0):2.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,(Plagiothecium_handelii_Yunnan_China:6.0,Plagiothecium_piliferum_WA_USA:4.0):1.0):2.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70088]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_18 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,(((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,(Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):2.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,(Plagiothecium_handelii_Yunnan_China:6.0,Plagiothecium_piliferum_WA_USA:4.0):1.0):2.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70092]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_13 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,(((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):1.0,((((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):0.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):2.0):1.0):2.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,(Plagiothecium_handelii_Yunnan_China:6.0,Plagiothecium_piliferum_WA_USA:4.0):1.0):2.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70087]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_3 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,(Isopterygiopsis_muelleriana_Scotland:7.0,Plagiothecium_euryphyllum_Yunnan_China:6.0):7.0):2.0,((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,(Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):2.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,Plagiothecium_handelii_Yunnan_China:5.0):2.0,Plagiothecium_piliferum_WA_USA:4.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70077]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_15 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):2.0,(((Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0,Plagiothecium_latebricola_Denmark:2.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):2.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,(Plagiothecium_handelii_Yunnan_China:6.0,Plagiothecium_piliferum_WA_USA:4.0):1.0):2.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70089]


END;
BEGIN TREES;
      TITLE trnLF_Wynns_10_Jan_14;
      LINK TAXA = TaxaForAnalysisStep12905;
      TREE PAUP_8 = [&R] ((((Herzogiella_seligeri_Denmark:5.0,Isopterygiopsis_muelleriana_Scotland:13.0):1.0,(((((((Plagiothecium_cavifolium_Denmark:0.0,Plagiothecium_cavifolium_Germany:0.0,((Plagiothecium_denticulatum_Denmark:0.0,Plagiothecium_ruthei_Denmark:1.0):1.0,Plagiothecium_denticulatum_var_obtusifolium_Germany:0.0,Plagiothecium_platyphyllum_Finland:0.0):1.0,(Plagiothecium_nemorale_Germany:0.0,Plagiothecium_nemorale_Iran:0.0,Plagiothecium_nemorale_aquatic_Germany:0.0,Plagiothecium_succulentum_Denmark:0.0):1.0,Plagiothecium_cavifolium_Denmark_B:0.0):2.0,Plagiothecium_latebricola_Denmark:1.0):1.0,(Plagiothecium_curvifolium_Denmark:0.0,Plagiothecium_curvifolium_Germany:0.0,Plagiothecium_laetum_Germany:2.0):1.0):1.0,Plagiothecium_neckeroideum_Yunnan_China:0.0):1.0,(Plagiothecium_draytonii_HI_USA:3.0,Plagiothecium_undulatum_Denmark:3.0):1.0):1.0,Plagiothecium_handelii_Yunnan_China:6.0):1.0,(Plagiothecium_euryphyllum_Yunnan_China:5.0,Plagiothecium_piliferum_WA_USA:4.0):3.0):5.0):13.0,Pseudotaxiphyllum_elegans_Germany:15.0):0.0,Taxiphyllum_sp_Yunnan_China:0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70082]


END;