#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 20, 2025; 11:39 GMT

TreeBASE (cc) 1994-2008

Study reference:
Fisher M., Koenig G., White T., & Taylor J. 2002. Molecular and phenotypic description
of Coccidioides posadasii sp. nov., previously recognized as the non-California
population of Coccidioides immitis. Mycologia, 94(1): 73-84.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S834]

[ The following blocks are input data for analysis step 1371 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep1371;
        DIMENSIONS NTAX=10;
        TAXLABELS
            Coccidioides_immitis_BA_CA
            Coccidioides_immitis_M_CA
            Coccidioides_immitis_SD_CA
            Coccidioides_posadasii_AZ_NCA
            Coccidioides_posadasii_M1_NCA
            Coccidioides_posadasii_M2_NCA
            Coccidioides_posadasii_M3_NCA
            Coccidioides_posadasii_SA_NCA
            Coccidioides_posadasii_SD_NCA
            Coccidioides_posadasii_TX_NCA
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M273]

	TITLE 'Cocci deltamu^2';
	LINK TAXA = TaxaForAnalysisStep1371;
	DIMENSIONS NCHAR=1;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -;

MATRIX
Coccidioides_immitis_BA_CA        ?
Coccidioides_immitis_M_CA         ?
Coccidioides_immitis_SD_CA        ?
Coccidioides_posadasii_AZ_NCA     ?
Coccidioides_posadasii_M1_NCA     ?
Coccidioides_posadasii_M2_NCA     ?
Coccidioides_posadasii_M3_NCA     ?
Coccidioides_posadasii_SA_NCA     ?
Coccidioides_posadasii_SD_NCA     ?
Coccidioides_posadasii_TX_NCA     ?
;
END;

[ The following blocks are output data for analysis step 1371 ]
BEGIN TREES;
      TITLE Tb6147;
      LINK TAXA = TaxaForAnalysisStep1371;
      TREE Fig._3 = [&R] (Coccidioides_posadasii_SA_NCA,(Coccidioides_posadasii_SD_NCA,((Coccidioides_posadasii_TX_NCA,(((Coccidioides_posadasii_M1_NCA,Coccidioides_posadasii_M3_NCA),((Coccidioides_immitis_SD_CA,Coccidioides_immitis_M_CA),Coccidioides_immitis_BA_CA)Coccidioides_immitis),Coccidioides_posadasii_M2_NCA)),Coccidioides_posadasii_AZ_NCA)))Coccidioides;
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr5644]


END;