#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 13, 2024; 5:06 GMT TreeBASE (cc) 1994-2008 Study reference: Fewer D., Friedl T., & Budel B. 2002. Chroococcidiopsis and heterocyst differentiating cyanobacteria are each other's closest living relatives. Molecular Phylogenetics and Evolution, 23(1): 82-90.. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S851] [ The following blocks are input data for analysis step 1405 ] BEGIN TAXA; TITLE TaxaForAnalysisStep1405; DIMENSIONS NTAX=26; TAXLABELS Anabaena_NIVA2811_ALZ82797 Calothrix_PCC7102_AF132779 Chlorogloeopsis_PCC6718_AF132777 Chroococcidiopsis_029_AF279107 Chroococcidiopsis_057_AF279108 Chroococcidiopsis_123_AF279109 Chroococcidiopsis_171_AF279110 Chroococcidiopsis_CCMP1489_AJ344556 Chroococcidiopsis_PCC6712_AJ344557 Chroococcidiopsis_PCC7203_RDP Chroococcidiopsis_SAG2023_AJ344552 Chroococcidiopsis_SAG2024_AJ344553 Chroococcidiopsis_SAG2025_AJ344554 Chroococcidiopsis_SAG2026_AJ344555 Chroococcidiopsis_SAG3979_AJ344558 Dermocarpa_PCC7301_DVZ82777 Dermocarpella_SAG2984_AJ344559 Fischerella_SAG2027_AJ344560 Gloeobacter_PCC7421_AF132790 Myxosarcina_PCC7325_AJ344562 Nostoc_PCC7120_X59559 Nostoc_SAG2028_AJ344563 Phormidium_IAMM221_AB003166 Pleurocapsa_PCC7327_PMZ82810 Pleurocapsa_PCC7516_X78681 Scytonema_PCC7110_AF132781 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M300] TITLE Fig._2; LINK TAXA = TaxaForAnalysisStep1405; DIMENSIONS NCHAR=474; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Anabaena_NIVA2811_ALZ82797 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTTGTAAACCTCTTTTCTCAGGGAAGAAATGACGGTACCTGAGGAATAAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGGGTCCGCAGGTGGCATTGTTTGTCTGCTGTTAAAGAGTTTGGCTCAACCAAATAAGAGCAGTGGAAACTACAAAGCTAGAGTATGGTCGGGGCAGAGGGAATTCCTGGTGTAGCGGTGAAATGCGTAGATATCAGGAAGAACACCGGTGGCGAAGGCGCTCTGCTAG-CCAAAACTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTAGCTCGTATCGAC Calothrix_PCC7102_AF132779 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGACGAAGGCTCTTGGGTCGTAAACCTCTTTTCTCAAGGAAGATAAGACGGTACTTGAGGAATAAGCATCGGCTAA-TCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGTTTTATAAGTCTGCTGTTAAAGCGTTAGGCTCAACCTAATAAGGGCAGTGGAAACTATAAGACTAGAGTATGTTAGGGGTAGAGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGAGATTGGGAAGAACACCGGTGGCGAAAGCGCTCTGCTAGGACAATACTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTGCCCGTATCGAC Chlorogloeopsis_PCC6718_AF132777 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTTGTAAACCTCTTTTCTCAGGGAAGAAATGACGGTACCTGAGGAAGAAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGTAGGTGGTGATGCAAGTCTATTGTCAAAGCGTGCGGCTCAACCGCATAAAGGCAGTGGAAACTGTGTAACTAGAGTGCATTCGGGGCAGGGGGAATTCCTGGTGTAGCGGTGAAATGCGTAGAGATCAGGAAGAACACCGGTGGCGAAAGCGCCCTGCTAGGCTGCAACTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCTGTAAACGATGGATACTAGGCGTTGCGTGTATCGAC Chroococcidiopsis_029_AF279107 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTTGTAAACCTCTTTTCTCAGGGAAGAAATGACGGTACCTGAGGAATAAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGCATTGCAAGTCTGCTGTCAAAGCTCAGGGCTTAACCCTGAAAAGGCAGTGGAAACTGAAATGCTGGAGTGCGGTAGGGGTAAAAGGAATTCCCGGTGTAACGGTGAAATGCGTAGAAATCCGGAAAAACACCAGTGGCGAAAGCGCTCTACTAG-CCGCAACTGACACTCATGGACGAAAGCTATGGGAGCGAATGGGATTAGATACCCCAGTATTCCTAGCTGTAAACCATGGATACTAGGCGTTGAGAGTATCGAC Chroococcidiopsis_057_AF279108 GGAGGAAGCAGTGGGGAATATTCCGCAATGGGCGACGACCTCACGGAGCAATACCGCGTGATGGAGGAAGGCTGTTCGGTTGTTATCCTCTTCTCTCCTGGAGGAAATGACGGTAGCTGATGAATCATCATCGGCTGC-TCCCTCCCACCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATGGGGCGTAAAGCGTCCGCAGGTGGCATATCAAGTCTACTGTCAAAGGTCAGGGCTTAACCCTGAAAGTGCAGTGGAAACTGAAATGCTGGAGTGCGGTAGGGGTAGAGGGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAAGAACACCAGTGGCGAAAGCGCTCTACTAG-CCGCAACTGACACTCATGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTGAGAGTATCGAC Chroococcidiopsis_123_AF279109 GGAGGCAGCAGTGGGGAATATTCCGCCATGGGCGACGACCTCACGGAGCAATACCGCCTGATGGAGGAAGGCTCTTCGGTTGTTGTCCTCTTCTCTCCTGGAGGAAATGACGGTAGCTGATGAATCATCATCCCGTGC-TCCCTCCCACCAGCCGCCGTAGTACTGAGGATGCAAGCGTTATCCGGAATGATGGGGCGTAAAGCGTCCGCAGGTGGCACTTCAAGTCTACTGTCAAAGGTCAGGGCTTAACCCTGGAAGTGCAGTGGAAACTGAAATGCTGGAGTGCGGTAGGGGTAAATGGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAAGAACACCAGTGGCGAAAGCGCTCTGCTAG-CCGCAACTGACACTCATGGACGAAAGCTATGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTGAGAGTATCCAC Chroococcidiopsis_171_AF279110 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTTGTAAACCTCTTTTCTTAGGGAAGAAATGACGGTACCTGAGGAATAAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGCATTGCAAGTCTGCTGTCAAAGCTCAGGGCTCAACCCTGAAAATGCCGTGGAAACTGAAATGCTGGAGTGCGGTAGGGGTAAATGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATCCGGAAGAACACCAGTGGCGAAGCGGCTCTACTGG-CCGCTACTGACACTCAAGGTACCGAAAGCTGGGAGCCAATGGGGTTAGATACCCCTGTAGTCCTAGCCGTAAACGATGGATACTAAGCGTTGAGAGTATCGAC Chroococcidiopsis_CCMP1489_AJ344556 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTTTTGGGTTGTAAACCTCTTTTGTTAAGGAAGAAGTGACGGTACTTAACGAATCAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATCATTGGGCGTAAAGC{CG}TCCGCAG-TGGTTAATCAAGTCTGCTGTTAAAGACAGAAGCTCAACTTCTGGTCGGCGGTGGAAACTGGTGAACTAGAGTACGGTAGGGGTCGAGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGAGATTGGGAAGAACACCAGTGGCGAAGGCGCTCGACTGGGCCGTAACTGACACTCAGGGACGAAAGCTAGGGTAGCGAAAGGGATTAGATACCCCTGTAGTCTTAGCTGTAAACGATGAACACTAGGCGTTGCTTGTATCGAC Chroococcidiopsis_PCC6712_AJ344557 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTTTTGGGTTGTAAACCTCTTTTCTCAAGGAAGAAATGACGGTACTTGAGGAATCAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGTCCGCAGGTGGTAATTCAAGTCGATTGTCAAAGACCGAAGCTTAACTTCGGAAAGGCAGTGGAAACTGAATAACTAGAGTACGGTAGGGGTAGAGGGAATTTCCAGTGTAGCGGTGAAATGCGTAGAGATTGGAAAGAACACCAGTGGCGAAGGCGCTCTACTGGACCTGTACTGACACTGAGGGACGAAAGCTAGGGGAGCGAAAGGGATTAGATACCCCTGTAGTCCTAGCTGTAAACAATGGATACTAGGCGTTGCTTGTATCGAC Chroococcidiopsis_PCC7203_RDP GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTCGTAAACCTCTTTTCTCAGGGAAGAATTGACGGTACCTGAGGAATCAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGCACATCAAGTCTGCTGTCAAAGCCCCCAGCTTAACTGGGAAGAGGCGGTGGAAACTGGTGAGCTAGAGAGCAATAGGGGTAGAGGGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAAGAACACCAGTGGCGAAAGCGCTCTACTAGGTTGCAACTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTTCTCGTATCGAC Chroococcidiopsis_SAG2023_AJ344552 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTTGTAAACCTCTTTTCTCAGGGAAGAAATGACGGTACCTGAGGAATCAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGCTTATCAAGTCGATTGTCAAAGGTCCTGGCTCAACTGGGAAGAGGCAGTGGAAACTGAAAAGCTAGAGTGCGGTAGGGGTAGAGGGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAAGAACACCAGTGGCGAAAGCGCTCTACTAGGCCTGCACTGACACTCATGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTGAGAGTATCGAC Chroococcidiopsis_SAG2024_AJ344553 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTCGTAAACCTCTTTTCTCAAGGAAGAAATGACGGTACTTGAGGAATCAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGCATTTCAAGTCTGCTGTCAAAGCCCCCAGCTTAACTGGGAATCGGCAGTTGAAACTGAGAAGCTAGAGAGCAATATGGGTAGAGGGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAAGAACACCAGTGGCGAAAGCGCTCTACTAGGTTGCATCTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTGAGAGTATCGAC Chroococcidiopsis_SAG2025_AJ344554 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGC-TGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTCGTAAACCTCTTTTCTCAGGGAAGAAATGACGGTACCTGAGGAATCAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGCACATCAAGTCTGCTGTCAAAGCCCCCAGCTTAACTGGGAAGAGGCGGTGGAAACTGGTGAGCTAGAGAGCAATAGGGGTAGAGGGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAAGAACACCAGTGGCGAAAGCGCTCTACTAGGTTGCAACTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTTCTCGTATCGAC Chroococcidiopsis_SAG2026_AJ344555 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGC-TGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTTGTAAACCTCTT?TCTCAGGGAAGAAATGACGGTACCTGAGGAATCAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGCTTATCAAGTCGATTGTCAAAGGTCCTGGCTCAACTGGGAACAGGCAGTGGAAACTGAAAAGCTAGAGTGCGGTAGGGGTAGAGGGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAAGAACACCAGTGGCGAAAGCGCTCTACTAGACCTGCACTGACACTCAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTGAGAGTATCGAC Chroococcidiopsis_SAG3979_AJ344558 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGC-TGACGGAGCAATACCGCGTGAGG-AGGAAGGCTCTTGGGTCGTAA-CCTCTTTTCTCAGGGAAGAAATGACGGTACCT{AG}AGGA-TCAGCATCGGCTA--TCCGTGCCAGCAGCCGC{AGT}GTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGCACATCAAGTCTGCTGTCAAAGCCCCCAGCTTAACTGGGAAGAGGCGGTGGAAACTGGTGAGCTAGAGAGCAATAGGGGTAGAGGGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAAGAACACCAGTGGCGAAAGCGCTCTACTAGGTTGCAACTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTTCTCGTATCGAC Dermocarpa_PCC7301_DVZ82777 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTTTTGGGTTGTAAACCTCTTTTAATAAGGAAGAAGTGACGGTACTTATTGAATAAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATCATTGGGCGTAAAGCGTCCGCAGGTGGCTCATCAAGTCTGCTGTTAAAGACAGAAGCTCAACTTCTGAATGGCGGTGGAAACTGGTGAGCTAGAGTATGGTAGGGGTTGAGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAAGAACACCAGTGGCGAAGGCGCTCAACTGG-CCATAACTGACACTCAGGGACGAAAGCTAGGGTAGCGAAAGGGATTAGATACCCCTGTAGTCTTAGCTGTAAACGATGAACACTAGGCGTTGCTTGTATCGAC Dermocarpella_SAG2984_AJ344559 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTTTTGGGTTGTAAACCTCTTTTGTTAAGGAAGAAGTGACGGTACTTAACGAATCAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGTCCGCAGGTGGTCAATCGTGTCTGCTGTTAAAGACAGAAGCTCAACTTCTGAGAGGCAGTGGAAACTGGTAGACTAGAGTATGGTAGGGGTTGAGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAAGAACACCAGTGGCGAAGGCGCTCAACTGGGCCATAACTGACACTGAGGGACGAAAGCTAGGGTAGCGAAAGGGATTAGATACCCCTGTAGTCCTAGCCGTAAACGATGAACACTAGGCGTTGCTTGTATCGAC Fischerella_SAG2027_AJ344560 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTTGTAAACCTCTTTTCTCAGGGAATAAGTGAAGGTACCTGAGGAATCAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGTAGGTTGCTGTGTGTGTCTATTGTTAAAGAGTCTGGCTTAACCAGATAAAGGCGGTAGAAACTACACAGCTAGAGTGCGTTCGGGGCAGAGGGAATTCCTGGTGTAGCGGTGAAATGCGTAGAGATCAGGAAGAACACCGGTGGCGAAAGCGCTCTGCTAGGCCGCAACTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTGAGAGTATCGAC Gloeobacter_PCC7421_AF132790 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCT{AG}ACGGAGCAACGCCGCGTGGGTGATGAAGGCCCGTGGGTCGTAAAGCCCTTTTGTCAGGGACGAACTGACGGTACCTGACGAATAAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGTACGTAGGCGGCCAGCCAAGTCTGGGGTCAAAGCCCGCAGCCTAACTGCGGAAAGGCCCTGGAAACTGGTTGGCTAGAGTGCGGTAGGGGCAAGGGGAATTCCCGGTGTAGCGGTGAAATGTGGAGATATCGGGAAGAACACCAGCGGCGAAAGCGCCTTGCTGGACCGCAACTGACGCTGAGGTACGAAAGCCAGGGGAGCAAATGGGATTAGATACCCCAGTAGTCCTGGCCGTAAACGATGGACACTAGGTGTTGCGCGTATCGAC Myxosarcina_PCC7325_AJ344562 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTTTTGGGTTGTAAACCTCTTTTATTAAGGAAGAAGTGACGGTACTTAAAGAATCAGCATCGGCTAA-TCCGTGCTT-CAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATCATTGGGCGTAAAGCGTCCGCAGGTGGTCATTCAAGTCTGCTGTTAAAGACAGAAGCTCAACTTCTGAGGAGCAGTGGAAACTGGATGACTAGAGTATGGTAGGGGTTGAGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAAGAACACCAGTGGCGAAGGCGCTCAACTGGGCCATAACTGACACTCAGGGACGAAAGCTAGGGTAGCGAAAGGGATTAGATACCCCTGTAGTCTTAGCTGTAAACGATGAACACTAGGCGTTGCTTGTATCGAC Nostoc_PCC7120_X59559 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTTGTAAACCTCTTTTCTCAGGGAATAAATGAAGGTACCTGAGGAATAAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGCACTGTAAGTCTGCTGTTAAAGAGCAAGGCTCAACCTTGTAAAGGCAGTGGAAACTACAGAGCTAGAGTACGTTCGGGGCAGAGGGAATTCCTGGTGTAGCGGTGAAATGCGTAGAGATCAGGAAGAACACCGGTGGCGAAAGCGCTCTGCTAGGCCGTAACTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTGGCTTGTATCGAC Nostoc_SAG2028_AJ344563 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTCGTAAACCTCTTTTCTCAGGGAAGAAATGACGGTACCTGAGGAATAAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGCGATGTAAGTCTGCTGTTAAAGAGTCTAGCTCAACTAGATAAAAGCAGTGGAAACTACATCGCTAGAGTGCGTTCGGGGCAGAGGGAATTCCTGGTGTAGCGGTGAAATGCGTAGAGATCAGGAAGAACACCGGTGGCGAAGGCGCTCTGCTAGGCCGCAACTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTGGCTTGTATCGAC Phormidium_IAMM221_AB003166 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAAGACCGCGTGGGGGAAGAAGGCTCTTGGGTTGTAAACCCCTTTTCTCAGGGAAGAACTGACGGTACCTGAGGAATAAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAAGACGGAGGATGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGTTCGTAGGTGGCTGTTCAAGTCTGCCGTTAAAGACCGGGGCTTAACTCCGGAAAAACTGTGGAAACTGAACAGCTAGAGTATGGTAGGGGTAAGGGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAAGAACACCGGTGGCGAAGGCGCCTTACTGG-CCATAACTGACACTGAGGGACGAAAGCTAGGGGAGCGAAAGGGATTAGATACCCCTGTAGTCCTAACTGTAAACGATGGATACTAGGTGTTGCCCGTATCGAC Pleurocapsa_PCC7327_PMZ82810 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAACGCCGCGTGAGGGAGGAAGGCCTTTGGGTTGTAAACCTCTTTTGCTCGGGAAGAAGTGACGGTACCGAGCGAATCAGCCTCGGCTAA-TCCGTGCCAGCAGCCGCGGTAAGACGGAGGAGGCAAGCGTTATCCGGAATCATTGGGCGTAAAGAGTCCGTAGGTGGCAACGCAAGTCGGCGGTCAAAGACCGGAGCTTAACTCCGGAGCGGCCGTGGAAACTGCGCAGCTAGAGTCCGGTAGGGGTAGCGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGAGATTGGGAAGAACATCGGTGGCGAAAGCGCGCTACTGG-CCGGAACTGACACTGAGGGACGAAAGCTAGGGGAGCGAAAGGGATTAGATACCCCTGTAGTCCTAGCTGTAAACGATGGAAACTAGGCGTGGCTTGTATCGAC Pleurocapsa_PCC7516_X78681 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGC-TGACGGAGCAATACCGCGTGAGGGAGGAAGGCTTTTGGGTTGTAAACCTCTTTTATTAAGGAAGAAGTGACGGTACTTAAAGAATCAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATCATTGGGCGTAAAGCGTCCGCAGGTGGCTCATCAAGTCTGCTGTTAAAGACAGAAGCTCAACTTCTGAGCAGCAGTGGAAACTGGTGAGCTAGAGTATGGTAGGGGTTGAGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAAGAACACCAGTGGCGAAGGCGCTCAACTGGGCCATAACTGACACTCAGGGACGAAAGCTAGGGTAGCGAAAGGGATTAGATACCCCTGTAGTCTTAGCTGTAAACGATGAACACTAGGCGTTGCTTGTATCGAC Scytonema_PCC7110_AF132781 GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTTGTAAACCTCTTTTCTCAGGGAATAAATGAAGGTACTTGAGGAATAAGCATCGGCTAA-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCGCAGGTGGTTTATCAAGTCGGCTGTCAAAGCGTCTGGCTCAACTAGATAAGGGCAGTGGAAACTGAGAGACTAGAGTAAGGTAGGGGTAGAGGGAATTCCTGGTGTAGCGGTGAAATGCGTAGAGATCAGGAAGAACACCGGTGGCGAAAGCGCTCTGCTGGACTATTACTGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTACGCGTATCGAC ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = Fig._2) = N: 1-474; CODONPOSSET CodonPositions (CHARACTERS = Fig._2) = N: 1-474; END; [ The following blocks are output data for analysis step 1405 ] BEGIN TREES; TITLE Tb6181; LINK TAXA = TaxaForAnalysisStep1405; TREE Fig._2 = [&R] (((((((Chroococcidiopsis_029_AF279107,Chroococcidiopsis_171_AF279110),(Chroococcidiopsis_057_AF279108,Chroococcidiopsis_123_AF279109)),(Chroococcidiopsis_SAG2026_AJ344555,Chroococcidiopsis_SAG2023_AJ344552)),((Chroococcidiopsis_SAG2025_AJ344554,Chroococcidiopsis_PCC7203_RDP),Chroococcidiopsis_SAG2024_AJ344553)),(((Anabaena_NIVA2811_ALZ82797,(Calothrix_PCC7102_AF132779,Scytonema_PCC7110_AF132781)),((Fischerella_SAG2027_AJ344560,Chlorogloeopsis_PCC6718_AF132777),Nostoc_SAG2028_AJ344563)),Nostoc_PCC7120_X59559)),(((((Dermocarpa_PCC7301_DVZ82777,Pleurocapsa_PCC7516_X78681),(Myxosarcina_PCC7325_AJ344562,Dermocarpella_SAG2984_AJ344559)),Chroococcidiopsis_CCMP1489_AJ344556),Chroococcidiopsis_PCC6712_AJ344557),Pleurocapsa_PCC7327_PMZ82810)),Phormidium_IAMM221_AB003166,Gloeobacter_PCC7421_AF132790); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr5681] END;