#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 1:27 GMT TreeBASE (cc) 1994-2008 Study reference: Salzman S.M., Driscoll H.E., Renner T., Andre T., Shen S., & Specht C. 2014. Spiraling into History: A Molecular Phylogeny and Investigation of Biogeographic Origins and Floral Evolution for the Genus Costus. Systematic Botany, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S16238] [ The following blocks are input data for analysis step 14393 ] BEGIN TAXA; TITLE TaxaForAnalysisStep14393; DIMENSIONS NTAX=74; TAXLABELS Chamaecostus_cuspidatus_RB584184 Chamaecostus_lanceolatus_pulchriflorus_RB550388 Chamaecostus_subsessilis_RB584183 Cheilocostus_globosus_CS02351 Costus_afer_M10205 Costus_aff._afer_WJK943683 Costus_aff._dubius_L920048 Costus_aff._ligularis_19980923003 Costus_aff._ligularis_20050100003 Costus_aff._phyllocephalus_BB870057 Costus_aff._phyllocephalus_M10389 Costus_aff._tappenbeckianus_20050100001 Costus_aff._tappenbeckianus_20050100002 Costus_aff._tappenbeckianus_WJK943697 Costus_albiflos_M9968 Costus_allenii_M9563 Costus_amazonicus_M9036 Costus_arabicus_CS98193 Costus_asplundii_R2976 Costus_barbatus_CS01256 Costus_beckii_CS99232 Costus_bracteatus_M9409 Costus_chartaceus_WJK903124 Costus_claviger_M9306 Costus_comosus_var._bakeri_19990126011 Costus_curvibracteatus_M9381 Costus_deistelii_M9298 Costus_dinklagei_TvA3549 Costus_dirzoi_19960228002 Costus_dubius_M10206 Costus_erythrocoryne Costus_erythrophyllus_R2847 Costus_erythrothyrsus_M9317 Costus_gabonensis_M10291 Costus_geothyrsus_BS6782 Costus_glaucus_Delft46325 Costus_guanaiensis_var._guanaiensis_R2666 Costus_guanaiensis_var._macrostrobilus_CS00253 Costus_guanaiensis_var._tarmicus_KMN2811 Costus_laevis_CS01257 Costus_lasius_M9155 Costus_lateriflorus_M10331 Costus_letestui_CS02331 Costus_leucanthus_19961105001 Costus_liliaceus_M9995 Costus_lima_var._scabremarginatus_BTM750400 Costus_loangensis_M10184 Costus_longibracteolatus_R3003 'Costus lucanusianus (yellow) Breteler5297 ' Costus_maboumiensis_M10227 Costus_malortieanus_M9791 Costus_montanus_R2972 Costus_nitidus_M9524 Costus_osae_M9501 Costus_phaeotrichus_CS02323 Costus_pictus_WJK943691 Costus_plicatus_WJK945376 Costus_productus_R2693 Costus_pulverulentus_WJK943680 Costus_quasiappendiculatus_CS99233 Costus_ricus_R2970 Costus_scaber_R2253 Costus_spectabilis_WJK976118 Costus_spicatus_WJK027143 Costus_stenophyllus_L750305 Costus_talbotii_20030109009 Costus_varzearum_WJK945379 Costus_villosissimus_KMN632 Costus_vinosus_M9568 Costus_woodsonii_CS01264 Costus_zingiberoides_BTM860001 Dimerocostus_strobilaceus_CS01272 Monocostus_uniflorus_WJK750065 Tapeinochilos_queenslandia_Davis_B68168 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M23627] TITLE 'Costus_trnLF 131001 3'; LINK TAXA = TaxaForAnalysisStep14393; DIMENSIONS NCHAR=1180; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Chamaecostus_cuspidatus_RB584184 ????????????????????????????????????????????????????CTTCCAATTCCAGTG---ACC-CTGGTGTTC-GGGTGGG-AATCCTGAG-GAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAGAATTAGAATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGAAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAATTGATTTCATAATCGAATATTCAATTATGAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCAGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTTT--ATC-------AGTGGTTCAGTTCAAACAAA-AT-----TGACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCATAGTCCATATCATTATCCTTAT--------ATTA????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Chamaecostus_lanceolatus_pulchriflorus_RB550388 ????????????????????????????????????????????????????????????????????AAACC-CTGGAATTTAAAATGGGCAATCCTGAGCCAAATCC------TATTTTGAAAAAACAAAGG------TTTATAAAACTAGAATTAGAATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGATCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATTCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAATTGATTTCATAATCGAATATTCAATTATGAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCAGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATCTATCC-TCTTTTTTTT---ATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATTATTCATAGTCCATATCATTATCCTTATATTAGGATATTAGGAAA--------CTACTTTT-AGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGG????????????????????????????????????????????? Chamaecostus_subsessilis_RB584183 ??????????????????????????????????????????????????AACTTCCAAATTCAGAG-AAACC-CTGGAATTTAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAGAATTAGAATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATACGTCTCTAAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATATG----AATATGAAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAATTGATTTCATAATCGAATATTCAATTATGAAATAATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCAGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTTT--ATC-------AGTGGTTCAGTTCAAACAAA-AT-----TGACTATCTTTCTCATTCACCCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCATAGTCCATATCATTATCCTTAT--------ATTAGGAAA--------CTACTTTT-AGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-C?????????????????????????????? Cheilocostus_globosus_CS02351 ?????????????????GCTTT-A-GTGGGG-AAACCCGCT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAGCAAAGG------TTTATAAAACTAG------AATAGATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGACCTACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT------------AATATGAAATATGAATAATATGAATGTTATAATATAATATATGAAT--GTTATT-AATA-TATGAATGT-----TATAATAT-----------AATATGAAAAATTCAGAAT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATC----TTTT------CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAAGATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATGATCCTTATATTAG--TATTAGGAAAATTTTTGACTACTTTTGAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGGTA-GAGCAGAGG Costus_afer_M10205 ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????AAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGA???????????????????????????????????????????????????????????????????????????????? Costus_aff._afer_WJK943683 ??????????????????CTTT-A--TGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG??????????????????????????? Costus_aff._dubius_L920048 ?????????????????GCTTT-A-GTGGG--AAACCC-CT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA???????????????????????????????????????????????????????????????? Costus_aff._ligularis_19980923003 ??????????????????????????????????????????????????AACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CTCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATG??????????????????????????????????????? Costus_aff._ligularis_20050100003 ???????????????????????????????????????CT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CTCTT-TAATTGACATAGACAC????????????????????????????????????????????????????????????????????????????? Costus_aff._phyllocephalus_BB870057 ?????????????????????????????????????CACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATAC?TACTGAC?TATCAAACGATTA---ATGACCGGAATCCAT----ATATATA-----------TAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATA-G----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCG?GAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTT-CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTGGACTACTTTTTAGT-----------------------------CTCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CA????????????????? Costus_aff._phyllocephalus_M10389 ??????????????TGAGCTTT-A-GTGTGG-AA-CCCGCT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCCAT----ATATATA---------------TAGTTAT---------AATATGAA-------------------------------------------------------------------------------TGT-----TATAAT-TGAATGTTCT--AATATGAAAAATGAAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTTCTTTAATAATAG-----TCTATTATTAAATCATTCATTC------TTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAA-------CGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTTAATCATTCACAGTCC-----------CTTAT--------ATGAGTCACATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGGTA-GA??????? Costus_aff._tappenbeckianus_20050100001 ????????????????????????????????????????????????????????CAAATTCAGAG-AAACC-CTGGAATTTAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGAAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTCATAATCGAATATTCAATTATGAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAAT??????????????????????????????????? Costus_aff._tappenbeckianus_20050100002 GGACTTGATTGGATTGAGCTTT-A-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATATAGAATTAGTATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTCATAATCGAATATTCAATTATGAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGGTA-GAGCAGAGG Costus_aff._tappenbeckianus_WJK943697 ??????????????????????????TGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTTAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG---T--AATAAAT-AGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGAAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AG-GGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGGTA-GAGCAG-GG Costus_albiflos_M9968 ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCG{CG}AATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCC--------------------------------------GTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-T???????????????????????????????????????????????????????????????????????????????????????????? Costus_allenii_M9563 ?????????????????GCTTT-A-GTGGGG--AACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGGTTTATATTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCTACAGTTGGTA-GAGCAGAGG Costus_amazonicus_M9036 ?????????????????GCTTT-A-GTGGGGTAAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTA--AATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCTACAGTTGGTA-GAGCAGAGG Costus_arabicus_CS98193 ?GACTTGATTGGATTGAGCTTT-A-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-?TGGAATTAAAAATGGGCAATC-TGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCA???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Costus_asplundii_R2976 ??????????????????????????????????????????????????????????????????????????????????????????????????GAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTATATTA--ATATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-T???????????????????????????????????????????????????????????????????????????????????????????? Costus_barbatus_CS01256 ????????????????????????????????????????????????????CTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCAC??????????????????????????????????????????????? Costus_beckii_CS99232 ?GACTTGATTGGATTGAGCTTT-A-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCATAG-AAACC-CTGGAATTAAAAATGGGCAATC-TGAGCCAAATCCT-----TATTTTGAGAAAA{CT}AAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACGGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CTCTT-T?ATTGACATAGAC?C?AGTAC?TT??C??-----?AA?GATGC?CAGGAAATGAAATGGT-CGGG-?TAGCT-CA?TTGG???????????? Costus_bracteatus_M9409 ??????????????????????????????????????????AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGGTTTATATTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCCCTCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAAAAT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-T-ATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAA???????????????????????????????????? Costus_chartaceus_WJK903124 ?????????????????GCTTT-A-CTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAGTAAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTT-CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAA-GGT-CGGGCATAGCT-CAGTTGGTA-GAGCAGAGG Costus_claviger_M9306 ???????????????????????????????????????????????GGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGTGCGGG-ATAGCT-CAGTTGGTAAGAG?????? Costus_comosus_var._bakeri_19990126011 ?????????????????????????????????????CGCT-AAG-TGGTAACTTCCAAATTCAGAG-AAACCACTGGAATTCAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATAGTTA----------------------T----------------------------------------------------------------------AATATGAATGT-----TATAAT-TGAATGTTCT--AATATGAAAAATTCAGATA-TATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATAGAATATGATATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTTT-CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGTCAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCT-CA????????????????? Costus_curvibracteatus_M9381 ?????????????????GCTTT-A-GTGGGG--AACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCTACAGTTGGTA-GAGCAGAGG Costus_deistelii_M9298 ?????????????????GCTTT-A-GTGGGG--AACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCACAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAGACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAA{AG}------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGAC{AT}ACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAG-T-CAG-TGGTA-GAGCAGAG? Costus_dinklagei_TvA3549 ????????????????????????????????????????T-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGC?ATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAAT???????????????????????????????????????? Costus_dirzoi_19960228002 ?????????????ATGAGCTTT-A-GTGTGG--AACCCGCT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATGAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATA----GTTAT---------AATATGAA-------------------------------------------------------------------------------TGT-----TATAAT-TGAATGTTCT--AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATATCATATTCTATTATTAAATCATTCATTC------TTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCG?GAGGGTTCAAGTCCCTC??TCCCCAATAAAAAGCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTTT-CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGTCAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCT-CA????????????????? Costus_dubius_M10206 ?????????????????????????????????AACCCACT-{AT}AG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAA{GT}GAAAT??????????????????????????????????? Costus_erythrocoryne ??????????????????????????TGGGG-AAACCCACT-AAGCTGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAA???????????????????????????????????? Costus_erythrophyllus_R2847 ????????????????????????????????????CCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCC{GT}GA{CG}CCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CAG???????????????? Costus_erythrothyrsus_M9317 ??????????????TGAGCTTT-A-GTGTGG-AAACCCGCT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTCAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATAGTTA----------------------T----------------------------------------------------------------------AATATGAATGT-----TATAAT-TGAATGTTCT--AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATATCATATTCTATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTT--CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGTCAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCT-CAG???????????????? Costus_gabonensis_M10291 ??????GATTGGATTGAGCTTT-A-GTGTGG-AAACCCGCT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATAGTTA----------------------T----------------------------------------------------------------------AATATGAATGT-----TATAAT-GGAATGTTCT--AATATGAAAAATTAAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTTCTTTAATAATAGAATATTCCATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAA-------CGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCC-----------CTTAT--------ATTAGTCACATTTTTTACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCT-CA????????????????? Costus_geothyrsus_BS6782 ????????????????????????????????????????????????GTAACTTCCAAATTCAGAG-AAACC-CTGGAATGAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CGTAAATAATAGAGA--GGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGGTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGACAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATA----GTTA------------------T----------------------------------------------------------------------AATATGAATGT-----TATAAT-TGAATGTTCT--AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATAGAATATGATATTATTAAATCATTCATTC------TTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAAAACCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTT--CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAAAGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTC----------TCCTTAT--------ATTAGTCAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAAT??????????????????????????????????? Costus_glaucus_Delft46325 ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????TATTT-GAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATAGTTA----------------------T----------------------------------------------------------------------AATATGAATGT-----TATAAT-TGAATGTTCT--AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATAGAATATGATATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTCTTTATCC-TCTTTTTTTT--CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGTCAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGG?A?-AGCA?AG? Costus_guanaiensis_var._guanaiensis_R2666 ??????????????????CTTT-A-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGCACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCA-AGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACGTCCTAAGCATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTTTCATTCCCTC-ATTCTTTCCCAAATGGATACGCGAACTAAAATCCT-GGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCTCCAGTTGGTAAGAGCAGTGG Costus_guanaiensis_var._macrostrobilus_CS00253 ????????????????????????????????????????????G-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTCAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATAGTTA----------------------T----------------------------------------------------------------------AATATGAATGT-----TATAAT-TGAATGTTCT--AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATATCATATTCTATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTT--CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCT-----TGGATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGTCAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCTC??????????????????? Costus_guanaiensis_var._tarmicus_KMN2811 ??????????????????????????TGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAG------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGC-ACAGTTGGTA-GAGCAGAGG Costus_laevis_CS01257 ?????????????????GCTTT-A-GTGGGGTAAACCC-CT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGACCTACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCTACAGTTGGTA-GAGCAGAGG Costus_lasius_M9155 ??????????????????????????TGGGG--AACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGTTATAATATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAG?????????????????????? Costus_lateriflorus_M10331 ????????TTGG---GGGCTTT-TGGTGGGG-GAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTTTAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTATAATATGAATAATATGAAT-------------ATA-------------------------------------------------TGAATAATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTT---CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTGTGACTACTTTTTAGT-----------------------------CCCTTTTAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-AAAGCTTCAGTTT-TA-GA??????? Costus_letestui_CS02331 ??????????????????CTTT-A-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATGAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TGACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTAGAATGAGAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGGTA-GAG?????? Costus_leucanthus_19961105001 ????????????????????????????????????????????????????CTTCCAAATTCAGAG-AAACC-CTGGAATTTAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATATAATATAATATGCAAAATTCA{AG}AGT-TAT-TGTGA----ATCC?TTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCC{AC}GAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGT?GACTTTAGAAATCG{GT}GAGGGTTCAAGTCCCTC{CT}ATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTTTCATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTA?TATCTTTCTCATTCACT{CT}TATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACC?GT?CAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAA????????????????????????????????????????? Costus_liliaceus_M9995 ???????????GATTGAGCTTT-A-GTGGGG-AAACCCACT-AAG-TG-TA-CTTCCAAAT-CAGAG-AAACC--T-GAATGAAAA{AT}T-GGCAAT-CTGAGCCAAATCCT-----TATTTTGAGAAA-CAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TG{AG}AAGCTGTT{CT}TAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TGACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCC???????????????????????????????????????????????????????????????????????????????????????????????? Costus_lima_var._scabremarginatus_BTM750400 ???????????????????????A-GTGTGG-AA-CCCGCT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATGAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATA----GTTAT---------AATATGAA-------------------------------------------------------------------------------TGT-----TCTAAT-TGAATGTTCT--AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATAGAATATGATATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTT--CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGTCAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCT-CAGT??????????????? Costus_loangensis_M10184 ?GACTTGATTGGATTGAGCTTT-A-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTTAAAATGGGCAATC-TGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTTTCATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTA{AG}GAAAATTTTTGACTACTTTTTAGT-----------------------------CTCTT-TAATTGACATAGACACAAGT????????????????????????????????????????????????????????????????????????? Costus_longibracteolatus_R3003 GGACTTGATTGGATTGAGCTTT-A-GTG{GT}GG-AAACCCGCT-AAG-TGGTAACTTCCAAAT?CAGAG-AAACC-CTGGAATGAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATA----GTTAT---------AATATGAA-------------------------------------------------------------------------------TGT-----TATAAT-TGAATGTTCT--AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATAGAATATGATATTATTAAATCATTCATTC------TTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAA------CGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTTT-CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGTCAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCT-CA?TTGGTA-GAGCAGAGG 'Costus lucanusianus (yellow) Breteler5297 ' ?????????????????GCTTT-A-GTGGGG--AACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACTAATGAAGCTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCACAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAGACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAG------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGAC{AT}ACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATGGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAA???????????????????????????????????? Costus_maboumiensis_M10227 ?????TGATTGGATTGAGCTTT-AG-TGGGG-?A?CC-ACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATGAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTTTCATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGGTA?????????? Costus_malortieanus_M9791 ?????????????????????????????????????????????????????????????????AG-AAACC-CTGGAATGAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATA----GTTAT---------AATATGAA-------------------------------------------------------------------------------TGT-----TATAAT-TGAATGTTCT--AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATAGAATATGATATTATTAAATCATTCATTC------TTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTT--CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTGAT--------ATTAGTCACATTTTTTACTACTTTTTAGT-----------------------------CCCTT-TAATTGGCATAGACACAAGTAC??????????????????????????????????????????????????????????????????????? Costus_montanus_R2972 ??????????????????????????TGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAGTAAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAATCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAAGG---CGGG-ATAG?????????????????????? Costus_nitidus_M9524 ?GACTTGATTGGA-TGAGCTTT-A-GTGTGG-AAACC-G?T-AAG-TGGTAACTTCCAA-TTCAGAG-AAACC-CTGGAATGAAAAA{GT}GG-CAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATAGTTA----------------------T----------------------------------------------------------------------AATATGAATGT-----TATAAT-TGAATGTTCT--AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATAGAATATGATATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTT--CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGTCAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAA?????????????????????????????????????????? Costus_osae_M9501 ????????????????????????????????????????????????????CTTCC?AATTCAGAG-AAACC-CTGGAATTAA?AATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTAT?TACCTAATATGTACGTATACATACTGAC?TATC?AACGATTA---ATGACCGGAATCCAT----ATATATA-----------TAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AA?AT-----?ATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTT-CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTT{CT}TCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATG??????????????????????????????????????? Costus_phaeotrichus_CS02323 ?????????????????GCTTT-A-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCCAT----ATATATA--GAATTAGTATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTT---CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTG????????????? Costus_pictus_WJK943691 ?????????????????GCTTT-A-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGTTATAATATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTT-CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGGTA-GAGCAGAGG Costus_plicatus_WJK945376 ?????????????????GCTTT-A-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTTAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGAAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCTACAGTTGGTA-GAGCAGAGG Costus_productus_R2693 ????????????????????????????????????????T-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTCAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAGAGGAACGTTGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATA----GTTAT---------AATATGAA-------------------------------------------------------------------------------TGT-----TATAAT-TGAATGTTT---AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATATCATATTCTATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTT--CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGTCAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGG????????????????????????????????? Costus_pulverulentus_WJK943680 ?????????????????GCTTT-A-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTTAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGAAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCTACAGTTGGTA-GAGCAGAGG Costus_quasiappendiculatus_CS99233 ?????????????????????????????????????????????????????????????????????????????????TAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTT-CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTT{CT}TCATTCACTCTATTCTTTC?CAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-C?????????????????????????????? Costus_ricus_R2970 ?????????TGGATTGAGCTTT-A-GTGGGG-AAACCCACT-AAG-T{GT}GTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAATCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CA????????????????? Costus_scaber_R2253 ??????????????????????????????????????ACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTT-CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTT{CT}TCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATA??????????????????????? Costus_spectabilis_WJK976118 ??????????????????CTTTTA-GTGGGG-AAACCCACT-AAG-TGGTAACTTCCAAATTCAG---AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCTTATTTTATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAAAACAAAAACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCT-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTCAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATTATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGTCCCTTTAATTGACTTGACTACTTTTTAGTCCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAG?????????????????????? Costus_spicatus_WJK027143 ??????????????????????????????G-GAACCCGCT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTCAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGG--CATAAATAA--GAGAG?GGAACG?TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATAC?TACTGACATATCAAACGATTAATCATGACCGGAATCC------ATATATA---------TATA----GTTAT---------AATATGAA-------------------------------------------------------------------------------TGT-----TATAAT-TGAATGTTCT--AATATGAAAAATTCAGA-TATATAAGCGAGAGGAACGTTTCCAATAGAAGTTTCTTTAATAATAGAATATGATATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTGATAGTCAGAGGAAAATCCGTCGACTTTAGAAATCG?GAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTCTTTATCC-TCTTTTTTTTT-CATCAGTGGTTAGTGGTTCAGTTCAAACAAA-ATTGACTTTACTATCTTTCTCATTCACTCTATT?TTTCACAAATGGAT-C-CGAACTCAAATCCTTGG-----ATCTTATCCCAATTTGGATAGATACAATACCTGTACAAATGAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAG?CAAATTTTTGACTACTTTTGAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCT-CAG???????????????? Costus_stenophyllus_L750305 ??????????????????CTTTTA-GTGGGG-AAACCCACTGAAG-TGGTAACTTCCAAATTCAGAATAAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG---T--AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTT-CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCTCCAGTTGGTAGGAGCAGAGG Costus_talbotii_20030109009 ?????????????????GCTTT-A--TGGGG--AACCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTCAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATATATAGTTAT---------AATATGAAT------------AATATGAA-TA----TAATA---------------------------------TGAATAATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTTT-CATC-------AGTAGTTCAGTTCAAACAAA-AT-----TGACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTATATTAGG-TATTAGGAAAATTTTTGCCTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGGTA-GAGCAGAGG Costus_varzearum_WJK945379 ??????????????????????????????????????????????TGGTAACTTCCAAATTCAGAGTAAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGGTA-GAG?????? Costus_villosissimus_KMN632 ??????????????????CTTTTA-GTGGGG-AAACCCACT-AAGCTGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGCATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAATGGT-CGGG-ATAGCT-CAGTTGGTA-G???????? Costus_vinosus_M9568 ???????????????????????????????????CCCACT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGC?ATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTA---ATGACGGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTT--CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CTCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCATAGGAAATGAAATGGT-CGGG-ATAGCT-CAGTT?????????????? Costus_woodsonii_CS01264 ??????????????????CTTTTA-GTGGGG-AAACCCACT-AA--TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTG-GCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATATGTACGTATACATACTGACATATCAAACGATTA---ATGACCGGAATCC------ATATATA---------TATAATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCA-GTCCCTCTATCCCCAATAAAAAGCCCATTTTACTTCCTAAGTATTTATCC-TCTTTTTTTTT-CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACAGGAAATGAAAGGG--CGGG-ATAGCT-CAGTTGGTA-GAGCGGAGG Costus_zingiberoides_BTM860001 ??????TGATTGGATGAGCTTT-A-GTG{GT}GG-GAACC-ACT-AAG-TGGT?ACTTCCAAATTCAGAG-AAACC-CTGGAATT{AC}AAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTGGGTAGTTGGAATCCGTCTCTCA{AC}AATGACAGAAAAGATATTCCTATATACCTAATATG{CT}{AC}CGTAT{AC}CATACTGACATATCA{AG}ACGATTA---ATGACCGGAATCC------ATA{CT}{AC}TA---------TAT{AC}ATTAGTTAT---------AATATGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATAT-AATAT-----AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATT{AC}TTAAATC{AC}TTCATTCC{AG}GA{AG}TTTGAT{AT}{GT}{AG}TCTTTTGAAA------AACTAAGT{AC}ATCGGACGAGAATAA{AG}GAT{AC}GAGTCCCATT{CT}{CT}ACATGTCAATACCGACAACAATGAAAT{CT}TAT{AG}G{AT}AAGAGGAAAATC{CT}{GT}TCGACTTT{AG}G{AG}AA{GT}{CG}{GT}TGAGGGTCC{AT}AGTCCCTCTATCCCCAA{CT}AAAAAGCCCATTTTACTTCCTAAG{CT}ATCTAT{CT}C-T{CT}?TTTTTTTTTCATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTT{CT}TCATTC{AC}{AC}T{CT}{CT}ATTCTTT{CT}ACAAA{AT}GGAT-C-{CG}GAACTAAAATCC{AT}{AT}G{CG}CTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCAC?GGAAATGAAATGGT-CGGG-ATAGCT???????????????????? Dimerocostus_strobilaceus_CS01272 ??????????????????????????????????????GCT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAAACAAAGG------TTTATAAAACTAGAATTAGAATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCCATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCCATAATTATATATA---------TATAATTAGTTAT----TGAATAATATGAATTAGTTATTGAATAATATGAA-------------------------------------TTAGTTATTGAATAATATGAATGT-----TATAATAT-----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAATTTATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCAGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTT---ATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTTCATATCATTATCCTTAT--------ATTAGGAAA-TT-------A---------------------------------------CTTT-TAGT????????????????????????????????????????????????????????????????????????????????????????? Monocostus_uniflorus_WJK750065 ???????????????????????????????????????????AG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTTAAAATGGGCAATCCTGAGCCAAATCCTTATTTT-TTTTGAGAAAACAAAGG------TTTATAAAACTAGAATTAGAATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCCATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCCAT----ATATATA---------TATAATTAGTTAT-------------TGAAT----------------------------------------------------------------------AATATGAATGT-----TATAATA-G----------AATATGCAAAATTCAGAGT-TAT-TGTGA----ATCCATTCCAATAGAAATTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCAGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATCC-TCTTTTTTTT---ATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAAC------AATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATTATTATCCTTAT--------ATTAGGAAA-TT-------ACTTTT-AGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATAAAATGGT-C?????????????????????????????? Tapeinochilos_queenslandia_Davis_B68168 ?????????????????GCTTT-A-GTGGGT-AA-CCCGCT-AAG-TGGTAACTTCCAAATTCAGAG-AAACC-CTGGAATTAAAAATGGGCAATCCTGAGCCAAATCCT-----TATTTTGAGAAA?CAAAGG------TTTATAAAACTAG------AATAAATAAGGATAGGTGCA---------GAGA-CTCAA---TGGAAGCTGTTCTAACGAATGAAGTTGAC-TACGTTTCGTTG-GTAGTTGGAATCCGTCTCTCAAAATGACAGAAAAGATATTCCTATATACCTAATACGTACGTATACATACTGACATATCAAACGATTAATCATGACCGGAATCCATAT--ATATATA----ATTAG----ATTAGTTAT---------AATATGAAT------------AATATGAA-T---------------GTTATAATATAAT---------------------ATATGAATGT-----TATAATAT-----------AATATGAAAAATTCAGAAT-TAT-TGTGA----ATCCATTCCAATAGAAGTTGATTTAATAATCGAATATTCAATTATTAAATCATTCATTCCAGAGTTTGATAGATCTTTTGAAA------AACTAAGTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAATAAAAAGCCCATTTGACTTCCTAAGTATTTATC----TTTT------CATC-------AGTGGTTCAGTTCAAACAAA-AT-----TTACTATCTTTCTCATTCACTCTATTCTTTCACAAATGGAT-C-CGAACTAAAATCCTTGGCTTGGATCTTATCCCAATTTGAATAGATACAATACCTGTACAAATAAACATATATGGGCAAAGAATCTCTATTATTGAATCATTCACAGTCCATATCATTATCCTTAT--------ATTAGGAAAATTTTTGACTACTTTTTAGT-----------------------------CCCTT-TAATTGACATAGACACAAGTACTTTACTA------GAATGATGCACGGGAAATGAAATGGT-CGGG-ATAGCA-CAGTTGGTA-GAGCAGAGG ; END; [ The following blocks are output data for analysis step 14393 ] BEGIN TREES; TITLE Costus_trnLF_131001_ML; LINK TAXA = TaxaForAnalysisStep14393; TREE ML_tree_of_Costus_trnLF = [&R] (Costus_malortieanus_M9791:0.011137,Costus_nitidus_M9524:0.0,(Costus_lima_var._scabremarginatus_BTM750400:0.002441,(Costus_longibracteolatus_R3003:0.0,(Costus_geothyrsus_BS6782:0.016191,((Costus_comosus_var._bakeri_19990126011:0.002712,Costus_glaucus_Delft46325:0.002697):0.0,(Costus_spicatus_WJK027143:0.007486,((Costus_productus_R2693:0.002575,(Costus_dirzoi_19960228002:0.006123,(Costus_erythrothyrsus_M9317:0.0,Costus_guanaiensis_var._macrostrobilus_CS00253:0.0):0.0):0.0):0.006149,((Costus_gabonensis_M10291:0.007124,Costus_aff._phyllocephalus_M10389:0.007692):0.004132,((Cheilocostus_globosus_CS02351:0.011587,Tapeinochilos_queenslandia_Davis_B68168:0.005345):0.003265,((Monocostus_uniflorus_WJK750065:0.009763,Dimerocostus_strobilaceus_CS01272:0.012596):0.010117,(((Costus_talbotii_20030109009:0.012354,(Costus_letestui_CS02331:0.0,Costus_liliaceus_M9995:0.0):0.00244):0.002405,(Costus_spectabilis_WJK976118:0.007722,(((Costus_loangensis_M10184:0.002605,(Costus_aff._ligularis_20050100003:0.0,(Costus_beckii_CS99232:0.004925,Costus_vinosus_M9568:0.002629):0.002452):0.0):0.0,(Costus_aff._ligularis_19980923003:0.0,Costus_aff._phyllocephalus_BB870057:0.00264):0.0):0.002421,(Costus_phaeotrichus_CS02323:0.0,(Costus_aff._tappenbeckianus_20050100002:0.004742,((Costus_osae_M9501:0.0,(Costus_ricus_R2970:0.002486,(Costus_afer_M10205:0.0,Costus_aff._dubius_L920048:0.0):0.0):0.0):0.0,(Costus_claviger_M9306:0.0,(Costus_arabicus_CS98193:0.0,(Costus_barbatus_CS01256:0.002767,(Costus_asplundii_R2976:0.0,(Costus_bracteatus_M9409:0.0,((Costus_maboumiensis_M10227:0.002457,(Costus_erythrocoryne:0.0,(Costus_woodsonii_CS01264:0.0,Costus_montanus_R2972:0.002581):4.0E-6):0.004928):0.0,(Costus_dinklagei_TvA3549:0.0,((Costus_lasius_M9155:0.0,(Costus_guanaiensis_var._tarmicus_KMN2811:0.0,(Costus_deistelii_M9298:0.0,'Costus lucanusianus (yellow) Breteler5297 ':0.007875):0.005):0.002458):0.0,(Costus_erythrophyllus_R2847:0.0,(Costus_varzearum_WJK945379:0.0,(Costus_allenii_M9563:0.0,(Costus_amazonicus_M9036:0.0,(Costus_curvibracteatus_M9381:0.0,(Costus_laevis_CS01257:0.0,(Costus_pictus_WJK943691:0.0,((Costus_stenophyllus_L750305:0.004863,((Costus_scaber_R2253:0.0,Costus_dubius_M10206:0.0):0.0,(Costus_aff._afer_WJK943683:0.0,(Costus_leucanthus_19961105001:0.003181,(Costus_quasiappendiculatus_CS99233:0.0,Costus_chartaceus_WJK903124:1.0E-6):1.0E-6):2.0E-6):1.0E-6):0.002807):0.0,(Costus_villosissimus_KMN632:0.0,(Costus_albiflos_M9968:0.0,(Costus_guanaiensis_var._guanaiensis_R2666:0.011003,Costus_zingiberoides_BTM860001:0.014925):0.005916):0.0):0.005462):0.003603):0.001919):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.002642):0.0):0.0):0.00262):0.0):0.0,(Costus_lateriflorus_M10331:0.022221,((Costus_aff._tappenbeckianus_20050100001:0.0,(Chamaecostus_lanceolatus_pulchriflorus_RB550388:0.020858,(Chamaecostus_cuspidatus_RB584184:0.03204,Chamaecostus_subsessilis_RB584183:0.011589):0.00532):0.011534):0.005454,(Costus_plicatus_WJK945376:0.0,(Costus_pulverulentus_WJK943680:0.0,Costus_aff._tappenbeckianus_WJK943697:0.0):0.0):0.0):0.002477):0.002713):0.005261):0.002723):0.041665):0.022023):0.004892):0.0):0.004549):0.0):0.0):0.0); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr76991] END;