#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 1:27 GMT TreeBASE (cc) 1994-2008 Study reference: Salzman S.M., Driscoll H.E., Renner T., Andre T., Shen S., & Specht C. 2014. Spiraling into History: A Molecular Phylogeny and Investigation of Biogeographic Origins and Floral Evolution for the Genus Costus. Systematic Botany, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S16238] [ The following blocks are input data for analysis step 14395 ] BEGIN TAXA; TITLE TaxaForAnalysisStep14395; DIMENSIONS NTAX=74; TAXLABELS Chamaecostus_cuspidatus_RB584184 Chamaecostus_lanceolatus_pulchriflorus_RB550388 Chamaecostus_subsessilis_RB584183 Costus_afer_M10205 Costus_aff._afer_WJK943683 Costus_aff._dubius_L920048 Costus_aff._ligularis_19980923003 Costus_aff._ligularis_20050100003 Costus_aff._ligularis_M10226 Costus_aff._phyllocephalus_BB870057 Costus_aff._phyllocephalus_M10389 Costus_aff._tappenbeckianus_20050100001 Costus_aff._tappenbeckianus_20050100002 Costus_aff._tappenbeckianus_Tva3675 Costus_aff._tappenbeckianus_WJK943697 Costus_albiflos_M9968 Costus_amazonicus_M9036 Costus_arabicus_CS98193 Costus_asplundii_R2976 Costus_barbatus_CS01256 Costus_beckii_CS99232 Costus_bracteatus_M9409 Costus_chartaceus_WJK903124 Costus_claviger_M9306 Costus_comosus_var._bakeri_19990126011 Costus_curvibracteatus_M9381 Costus_deistelii_M9298 Costus_dinklagei_TvA3549 Costus_dirzoi_19960228002 Costus_dubius_M10206 Costus_erythrophyllus_R2847 Costus_erythrothyrsus_M9317 Costus_gabonensis_M10291 Costus_geothyrsus_BS6782 Costus_glaucus_Delft46325 Costus_guanaiensis_var._guanaiensis_R2666 Costus_guanaiensis_var._macrostrobilus_CS00253 Costus_guanaiensis_var._tarmicus_KMN2811 Costus_laevis_CS01257 Costus_lateriflorus_M10331 Costus_letestui_CS02331 Costus_leucanthus_19961105001 Costus_liliaceus_M9995 Costus_lima_R3014 Costus_lima_var._scabremarginatus_BTM750400 Costus_loangensis_M10184 Costus_longibracteolatus_R3003 'Costus lucanusianus (yellow) Breteler5297 ' Costus_lucanusianus_M10000 Costus_maboumiensis_M10227 Costus_malortieanus_M9791 Costus_nitidus_M9524 Costus_osae_M9501 Costus_phaeotrichus_CS02323 Costus_pictus_WJK943691 Costus_plicatus_WJK945376 Costus_productus_R2693 Costus_pulverulentus_WJK943680 Costus_quasiappendiculatus_CS99233 Costus_ricus_R2970 Costus_scaber_R2253 Costus_spicatus_WJK027143 Costus_spiralis_M9335 Costus_stenophyllus_L750305 Costus_talbotii_20030109009 Costus_varzearum_WJK945379 Costus_villosissimus_KMN632 Costus_vinosus_M9568 Costus_wilsonii_M9507 Costus_woodsonii_CS01264 Costus_zingiberoides_BTM860001 Dimerocostus_strobilaceus_CS01272 Monocostus_uniflorus_WJK750065 Tapeinochilos_queenslandia_Davis_B68168 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M23630] TITLE Costus_CaM_131001; LINK TAXA = TaxaForAnalysisStep14395; DIMENSIONS NCHAR=818; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Chamaecostus_cuspidatus_RB584184 ?TTGG-----TG---A-A-----TG------------------------------------------ATAT--ATTATAAATCCAAAAG-TTAAAT-TTG-TCAAT--TAATGAA-GATGTAT--CATG-TGG-CAAACAGTATCTTACCAACCATAA-AA--T-GA---AAAGCAACAGGAAAGTATAAGTCTTTCT-ATTT-TTA-----CCTTTCTCA-ATA-GAACA--GGTTCT-TTCTTAAAAAAATT-GCCTGCAACTTTC-T----AAT-TATA----GTCC----TTAGTAATGTATG---------TCATACTTCTTATAAGCTATCAAACATT-GTAAAAG------------------------GTTG-----AA-GCT----------------ACAG----CAAAAGGCTCCCAGTACTCCAGTAGTATTAACA-TA-AA--TGGCTGGTTATGTAAGTG-AC---ATTTGATATTTT--GCT---TGATAAG-TATGTAGAGTCACAA-TGATTTAAGAT----TAAAAG-AT----GGACAAAAACTTGGTGCAAATTT-TAC----TATGC-----TTACT---------TATTCTTT-GG------TATCAACAGGTTGTATCACCACCAAAGAACTTGGGACTGTCATGCGTTCTCTGGGTCAGAACCCAACAGAAGCAGAATTACAGGACATGATAAATGAAGTTGATGCAGATGGT-AATGGCACAATTGACTTC-CCTGAGTTTCTTAATCTGATGGCTCGGAAAATGAAGGACACTGACTCTGA-GGAAGAGTTG Chamaecostus_lanceolatus_pulchriflorus_RB550388 ?TTGG-----TG---A-A-----TG------------------------------------------ATAT--ATTATAAATCCAAAAG-TTAAAT-TTC-TCAAT--TAATGAA-GATGTAT--CATG-TGG-CAAACAGTATCTTACCAACCATAA-AA--T-GA---AAAGCAACAGGAAAGTATTAGTCTTTCT-ATTT-TTA-----CCTTTCTCA-AGA-GAACA--GGTTCT-TTCTTAAAAAAATT-GCCTGCAACTTTC-T----AAT-TATAT----TCC----TTAGTAATGTATG---------CCATACTTCTTATAAGCTATCAAACGTT-GTAAAAG------------------------GTTG-----AA-GCT----------------ACAG----CAAAAGGCT-------CT------GTATTAACA-TA-AA--TGTTTGTTTATGTAGGTG-AC---AGTTGATATTTT--GCT---TGATAAG-TATGTACAGTCACAA-TGATTTAAGATTAT-TAAAAG-AT----GGACAAAAACTTGGTTCAAATTT-TAC----TATGC------TACT---------TATTCTTT-GG------TATCAACAGGTTGTATCACCACCAAAGAACTTGGGACTGTCATGCGTTCTCTAGGTCAGAACCCAACAGAAGCAGAATTACAGGACATGATAAACGAAGTTGATGCAGATGGT-AATGGCACAATTGACTTC-CCTGAGTTTCTTAATCTGATGGCTCGTAAAATGAAGGACACTGACTCTGA-GGAAGAATTG Chamaecostus_subsessilis_RB584183 ?TTTG-----TG---A-A-----TG------------------------------------------ATAT--ATTATAAATCCAAAAG-TTAAAT-TTG-TCAAT--TAATGAA-GATGCAT--CATG-TGG-CAAACAGTATCTTACCAACCATAA-AG--T-GA---AAAGCAACAGGAAAGTATAGGTCTTTCT-ATTT-TTA-----CCTTTCTCA-ATA-GAACA--GGTTCT-TTCTTAAAAAAATT-GCCTGCAAC-TTC-T----AAT-TATAT----TCC----TTTGTAATGTATG---------TCATACTTCTTATAAGCTATCAAACATT-GTAAAAG------------------------GTTG-----AA-GCT----------------ACAG----CAAAAGGCTCCCAGTACT-CAGTAGTATTAACA-TA-AA--TGGCTGGTTATGTAAGTG-AC---ATTTGATATTTT--GCT---TGATAAG-TATGTAGAGTCACAA-TGATTTAAGAT----TAAAAG-AT----GGACAAAAACTTGGTGCAAATTT-TAC----TATGC-----TTACT---------TATTCTTT-GG------TATCAACAGGTTGTATCACCACCAAAGAACTTGGAACTGTCATGCGTTCTCTGGGTCAGAACCCAACAGAAGCAGAATTACAGGACATGATAAACGAAGTTGATGCAGATGGT-AATGGCACAATTGACTTC-CCTGAGTTTCTTAATCTAATGGCTCGTAAAATGAAGGACACTGACTCTGA-GGAAGAGTTG Costus_afer_M10205 ?????????????????????????????TG-GGCCCTTGGC-CTTTTCATG-TCAAA--TTGTACTATTTGC----------------------TTTTT-TTA-G--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCCAGA-AATTTCGATCC----CAA---------------CCTTTGGATT--TAT-----ACCGGTCCA-ATA-CTAGA-CGG---TAGACCGGTACAAATTTGG-AGCC-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATTGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAA-GACAC???????????????????? Costus_aff._afer_WJK943683 ?TGGGATAATTTTATA-ATATA--GCATATG-AGCCA-AGACC-TTTTCCAGGTTAAAATTGGTA-TTTTTGGT---------------------TTTTT-TTA-G--CAATTTA-GAGGT-T-TTTTAAAGGA-----------------AACCAAA-AATTTTGGTTC----CAA---------------CTTTTGGATT--TAA-----TCCGGTC-A-ATA--TAAG-AGG--GTAATCCGGGTAAAATTTGGGACCA---TTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCAG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAA???????????????????????????????? Costus_aff._dubius_L920048 ????????????????????????GCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTT-----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATTGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGACTCTGA-GGAGGAACTA Costus_aff._ligularis_19980923003 ??????????????????????TTGCATCTG-AGCATTAGGCGTTTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGCAC-TTTTGATGGA-----------------AGCAAGA-AATTTTGCTCC----GAA---------------CTTTCCGATT--TGT-----ACCCGTCCA-A------GA------CTAGAC----------TCG--ACCA-GTTTTTA----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCCTTCTTGGGGAAAA-------------------------CTTCCACCCAATGCTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGCA-TTTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCAAACTCATCTG-CATAATGTATTCCGA-CAGTTTAAGAT----TACAAGTAG----TCATAAGATTTTGCCCCAAAGCTCTGCCGTCTTTGG-TAAATAACTG---------TTTTTTT----ACTCTTTTCAACAGG{CG}TGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAGAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGA{AT}GC{CG}GATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGAAGAAAG{AG}AACTGACT{CT}CCA-AGAAGAA??? Costus_aff._ligularis_20050100003 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_aff._ligularis_M10226 ?TTGG-TAAT{CT}GTTTA-ATATATTGCATCTG-AGCATTAGACGTTTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGCAC-TTTTGATGGA-----------------AGCAAGA-AATTTTACTCC----GAA---------------CTTTCCGATT--TGT-----ACCCGTTCA-A------GA------CTAGACCAGTAGA--TTCG--ACCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCATTCTTGAGGAAAA-------------------------CTTCCACCCAATGCTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGCATTTTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCGA-CAGTTTAAGAT----TACAAGTAG----TCATAAGATTTTGCCCCAAAGCTCTGCTGTCTTTGG-TAAATATCTG--------TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTCGGTACTGTGATGCGTTCTCTGGGTCAGAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGACTCCGA-AGAGGAACTA Costus_aff._phyllocephalus_BB870057 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCATTTT-CATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCAC?CTTTAGGAAAA-------------------------CTTCCACCCAATACTATTTT----------GACTGG--ACAAA--A------------------------?A?A??A?AA{AT}TTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGATT----ACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGA?ATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGA?????????????????????????????? Costus_aff._phyllocephalus_M10389 ?TTGG-CAAGCGT-TAGATATATTGC-TCTG-AGCATTAGGCGTTTTTCAAGCTCAGA-T-TGTACTATTCAC----------------------TCTTG-ATATG--CAATTAT-GATGCAC-TTGAGATGGA-----------------AGCAA---AATTTTG-TAT----TCA---------------CT-TC-GACT--TGT-----ACCGGTCCA-A------GA-C-----TAGACCGGTAG---TTTGG-ACCA--TTTTTT----AAA-----------CT----T-------GGAGGGAA----G-CCAT--------------A-C-TT-TTGAGGAAAA-------------------------CTTCCCCCCA-TGTT-TTT-----------G---GG--ACAAACGC------------------------CAGAAGCT--TTTCCCCCCATTTTTGTATAA---TTCTC-TATATT--TA-AACTCATCCG-CATAATGTACTCCGA-CAGTTCAAGAT-----ACAAG-AG----TCATAAG-TT----CCCAAA--TCTGCGGTCTGTG--AAAA-AACTG----------TTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTCGGTACTGTGATGCGTTCTCTGGGTCAGAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGAT-AAGG-C?????????????????????? Costus_aff._tappenbeckianus_20050100001 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCATTTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCAATCC----GAA---------------CTTTCAGATT--TAT-----ACCGGTCCA-A------GA-C-----TAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAA-TTTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAACGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTTGGGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAGAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGACTCCGA-GGAGGAACTA Costus_aff._tappenbeckianus_20050100002 ?????????????????????????????TG-AGCATTAGGCATTTTTCATGCTCAGA-TTTGT-CTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCAATCT----GAA---------------CTTTCGGATT--TAT-----ACCGGTCCA-A------GA------CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------GTTTCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAA-TTTTTTCCCCATTTTTGTTTAA---TTTTCCTATATG--TCTAACTCATCTG-CATAATGTATTCCCA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTTTGCGGTCTTTGG-TAAATAACTG--TTT---TTTTTTTT--GAACTCTTTTCAATAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCTGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATC????????????????????????????????????????????? Costus_aff._tappenbeckianus_Tva3675 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCATTTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCAATCT----GAA---------------CTTTCGGATT--TAT-----ACCGGTCCA-A------GA------CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTTCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAA-TTTTTTCCCCATTTTTGTTTAA---TTTTCCTATAAT--TCTAACTCATCTG-CATAATGTATTCCCA-CAGCTTAAGAT----TACAAGTAG----GCAAAAGATTTTGCTCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG---TT---TTTTTTTT-GGAACTCTTTTCAATAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGAAAGATGAAGGACACTGACTCCGA-GGAGGAACTA Costus_aff._tappenbeckianus_WJK943697 ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????AT-TTTTAA?GGA-----------------AGCAA?A-AATTTCAAT?T----GAA---------------CTTT?GGATT--TA?-----?CCGGTCCA-A------G?-?-----TAGACCGGTACAAATT?GG-AGCA-GTTTTTT----AAA-----------??----TT------GGG?GGAA----GACCAT-------------TATC?CT?TTTAGGAAAA-------------------------?TTCC?CCCAATA?T?TTT----------TG???GG--ACAAAAGA------------------------CAGTAGATTTTTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--T?TAA?TCAT?TG-CA?AATGTATTCC??-CAG?TTAAGAT----TACAAGTAG----GCATAAGATTTTTCCCCAAAGCTTTGCGGT?TTTGG-TAAATAACTG-TTTT---TTTTTTTT--GAACTCTTTTCAATAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCTGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGA?GGCTCGGAAGATGA?G????????????????????????? Costus_albiflos_M9968 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCATTTTTCATGCTCATA-GTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-CATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACCGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------CAGTATAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TGAATAACTG--------TTTTTTTT-GGAACTCGTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTAGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGCAAATGGGACAATCGACTTTTCCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_amazonicus_M9036 ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????TGCGGTCTTTGG-TAAATAACTG----T---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCA???????????????????????????????????????????????? Costus_arabicus_CS98193 ???????????????????????????TCTGGAGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCTATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTG----------------------G-TAAATAACTG----T---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGTAAGATGAAGGACACTGA????????????????? Costus_asplundii_R2976 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG----T---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAG-ACACTGATTCTGA-GGAGGAACTA Costus_barbatus_CS01256 ?????????????????????ATTGCATCCG-AGCATTAGGCATTTTTCATGCTCAGA-TTGGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACCGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATATTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGA--TGTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG----T---TTTTTTTT-GGAACTCGTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CTTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_beckii_CS99232 ?????????????????????????CATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGAGCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG----T---TTTTTTT--GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_bracteatus_M9409 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG----T---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_chartaceus_WJK903124 ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGAAGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--ATTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCCTTGG-TAAATAACTG----T---TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATC????????????????????????????????????????????? Costus_claviger_M9306 ???????????????????????TGCATCTG-AGCATTGGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGCAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG---TT---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_comosus_var._bakeri_19990126011 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA---TTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_curvibracteatus_M9381 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATGCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTACAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_deistelii_M9298 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTC-TGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACT{AC}TTTTCAACAGGCTGCATTAC{CT}ACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACAGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATTGACTTT-CC-GAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGACTCTGA-GGAGGAACTA Costus_dinklagei_TvA3549 ?TTGG-TAATTGTTTA-ATATATTGCATCCG-AGCATTAGGCATTTTTCATGCTCAGA-TTGGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACCGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATATTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAT--GTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG----T---TTTTTTTT-GGAACTCGTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_dirzoi_19960228002 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTT-----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CATCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_dubius_M10206 ?GGGG-AAAGTGT----AAATATAGCGTATG-AGCGCTTGGCGC-TTTCC-GGTTAAA-GTTGGAA-A-TTGGT---------------------TCTTC-T-AAG-CCAATTT--GAAGGAA-TTTTAAAGGG-----------------ACCAGGA-AATTTGGTTCC----CA----------------CTTTGGAATT--AAT------CCGGTTCC-ATT-CAGGA-GGG---TAG-CCGG--CCAATTTGG-GCCG-G-TTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCAG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATGACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTTCCCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAA-GACAC???????????????????? Costus_erythrophyllus_R2847 ????????????????????????????????????????????????????????????????????????C----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAG--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGT?????????????????????????????????????????????????????? Costus_erythrothyrsus_M9317 ?TTGG-TAATTGTTTA-ATATATTGCAT-TG-AGCATTGGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTCCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTC-GCGGTCTTTGG-TAAATAACTG----T---TTTTTTTT---AACTCTATTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCG??????????????????????????????????? Costus_gabonensis_M10291 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCGTTTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGCAC-TTTTGATGGA-----------------AGCAAGA-AACTTTGCTAC----GAA---------------CTTTCCGATT--TGT-----ACCCGACCA-A------GA-C-----TAGACCGGTAGA--TTC-G-ACCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCATTCTTGAGGAAAA-------------------------CTTCCACCCAATGCTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGCA-TTTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCGA-CAGTTTAAGAT----TACAAGTAG----TCATAAGATTTTGCCCCAGAGCTCTGCGGTCTTTGC-TAAATAACTG--------TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTTTGGGTCAGAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGACTCCGA-GGAGGAACTA Costus_geothyrsus_BS6782 ??????????????????????????????????????AGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATT{GT}CGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATAGT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG---TT---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_glaucus_Delft46325 ??????????????????????????????????????????????????TGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_guanaiensis_var._guanaiensis_R2666 ????????????????????????????????????????????????????????????TTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--AAAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACT-----G---TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGAAGGAGGAACTA Costus_guanaiensis_var._macrostrobilus_CS00253 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTGGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACT-----T---GTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_guanaiensis_var._tarmicus_KMN2811 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTGGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_laevis_CS01257 ?????????????????????????????????????????????????????????A-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG---TT---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_lateriflorus_M10331 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGAATTAGGCATTCTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-AATGTAT-TTTTGATGGA-----------------AGCAAGA-AATTTTGATCC----GAA---------------CTT-CAGATT--TGT-----ACCGGTCCA-A------GA-C-----TAGACCGGTACA-----------A-GTTTTTT----AAA-----------CT----TT------GGATGGAA----AACCAT-------------TATCACTCTTGAGGAAAA-------------------------CTTCCACCCAATGCTATTT----------TGACTGG--ACAAAAGA------------------------CGGTAGAA-TTTTTTCCCCATTTTTGTTTAA---TGTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGATTACATACAAGTAG----GCATAAGATTTTGCCTCAAAGCTCTGCGGTATTTGG-TAAATAACT---------TTTTTTTT-----CTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAGAATCCTACGGAAGCGGAGCTCCAGGACATGATTAATGAAGTTGATGCGGATGGC-AACGGGACAATCGACTTTCCCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGACTCCGA-GGAGGAACTA Costus_letestui_CS02331 ??????????????????????????ATCTG-AGCATTAGGCGTTTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-AATGTAT-TTTTGATGGA-----------------AGCAATA-AATTTCGATCC----GAA---------------GTTTCAGATT--TGA-----ACTGGTCCA-A-A-C-A--------CTAGACCGGTACA-----------A-GTTTTTT----AAA-----------CT----TT------GGATGGAA----AACCAT-------------TATCACTCTTGAGGAAAA-------------------------CTTCCACCCAATGCTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAATTTTTTTCTCCATTTTTGTTTAA---TTTTCCTTTATT--TCTAATTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAGGTAG----GCATAAGATTTTGCCCCAAAGCTATGCGGTATTTGG-TAAGTAACTG--TTT---TTTTTTTT--{GT}CTCTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAGAATCCTACGGAAGCAGAGCTCCAGGACATGATAAATGAAGTTGATGCAGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAA-GACAC???????????????????? Costus_leucanthus_19961105001 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG---TT---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_liliaceus_M9995 ?TTGG-TAATTGTTTA-ATATATTGCATTTG-AGAATTAGGCATTCTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-AATGTAT-TTTTGATGGA-----------------AGCAAGA-AATTTTGATCC----GAA---------------CTT-CAGATT--TGT-----ACCGGTCCA-A------GA-C-----TAGACCGGTACA-----------A-GTTTTTT----AAA-----------CT----TT------GGATGGAA----AACCAT-------------TATCACTCTTGAGGAAAA-------------------------CTTCCACCCAATGCTATTT----------TGACTGG--ACAAAAGA------------------------CGGTAGAA-TTTTTTCCCCATTTTTGTTTAA---TGTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGATTACATACAAGTAG----GCATAAGATTTTGCCTCAAAGCTCTGCGGTATTTGG-TAAATAACT----------TTTTTTT-----CTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAGAATCCTACGGAAGCGGAGCTCCAGGACATGATTAATGAAGTTGATGCGGATGGC-AACGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGACTCCAA-GGAGGAACTA Costus_lima_R3014 ?TTGG-TAATTGTATA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAT--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_lima_var._scabremarginatus_BTM750400 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--ATTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_loangensis_M10184 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGACGTTTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGCAC-TTTTGATGGA-----------------AGCAAGA-AATTTTACTCC----GAA---------------CTTTCCGATT--TGT-----ACCCGTTCA-A------GA-C-----TAGACCAGTAGA--TTC-G-ACCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCATTCTTGAGGAAAA-------------------------CTTCCACCCAATGCTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGCATTTTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCGA-CAGTTTAAGAT----TACAAGTAG----TCATAAGATTTTGCCCCAAAGCTCTGCTGTCTTTGG-TAAATATCTG--------TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTCGGTACTGTGATGCGTTCTCTGGGTCAGAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGACTCCGA-AGAGGAACTA Costus_longibracteolatus_R3003 ?TTGG-TAATTGTTTA-ATATATTGCATCCG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAACTCTGCGGTCTTTGG-TAAATAACTG---TT---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA 'Costus lucanusianus (yellow) Breteler5297 ' ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTCTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACCCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAA--ATTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACAGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATTGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGACTCTGA-GGAGGAACTA Costus_lucanusianus_M10000 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTCTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACCCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAA--ATTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACAGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATTGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGACTCTGA-GGAGGAACTA Costus_maboumiensis_M10227 ?TTGG-TAATTGTTTA-ATATATTGCATCCG-AGCATTAGGCATTTTTCATGCTCAGA-TTGGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACCGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAT--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG---------TTTTTTT-GGAACTCGTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTAGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_malortieanus_M9791 ??????????????????????????????????????????????????GGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACA???G??G?A{CG}C---TTTTTT----?A?-----------?TT---T?------??A????A----?A????-------------T??C?CTCTT--G?A?AA-------------------------?????CCCCC?CA?TATTT----------TT???G?--G?AAAA?A------------------------AAAAAGAAA-TTTTT??CCCTTTTT-TT???TTTTTTT??TAT?TT--T?????TCATC?G-?AT??TGT???CCAA-C?G???AAGA?----?AC?AG???----??A?AA??TTT?CCC??A?AT?TC?G?C?T?T?T??-?AAA?A??TT--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGA?????????????????????????????? Costus_nitidus_M9524 ?????????????????????????????????????????????????????????????TGTACTATTTGC----------------------TCCTC-TTATG--CAATTAT-GATGGAT-TTTTAATGGA-----------------AGCAAGA-AATTTCCATCC----CCA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAAA-CGG--GTAGACCGGTACAAATGCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA-----ACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCCCCCAATACTATTT----------TGACTGG--ACAAAAAA------------------------AAGTAAAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGGATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGG-CTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACA-GCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_osae_M9501 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTT-GATCC----CCA---------------CTTT{CT}GGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--GTAGACCGGTACAAATT{CT}GG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCCCCCCATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCCTTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG---TT---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_phaeotrichus_CS02323 ????????????????????????????CTG-AGCATTAGGCATTTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCAATCT----GAA---------------CTTTCGGATT--TAT-----ACCGGTCCA-A------GA------CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTTCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------CAGTAGAATTTTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAA{GT}GTATTCCCC-CAGCTTAA{AG}AT----TACAAGTAG----GCATAAAATTTTGCCCCAAAGCTTTGCGGTCTTTGG-TAAATAACTGTTTTT---TTTTTTTT--GAACTCTTTTCAATAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCTGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGA?????????????????????????????????????????? Costus_pictus_WJK943691 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAAA-CGG--CTAGACCGGAACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CATCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_plicatus_WJK945376 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CGA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG----T---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_productus_R2693 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------GTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_pulverulentus_WJK943680 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATGCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_quasiappendiculatus_CS99233 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTGGGCA-TTTTCATGCTCAGA-TTTGAACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG---------TTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_ricus_R2970 ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GATT--TAT-----ACTGGTCCA-ATA-CCTGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_scaber_R2253 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTTGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_spicatus_WJK027143 ????????????????????????GCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGC{AT}CCGCG{GT}T{CT}TTTGG-{AT}AAATAACTG---TT---TTTTTTT----AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGA-GA??????????????????????????? Costus_spiralis_M9335 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCTATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG---TT---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_stenophyllus_L750305 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GATCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCC{AC}CCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--ATTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTACCCCAAAGCT{CT}TGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGA?????????????????????????????? Costus_talbotii_20030109009 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCGTTTTTAATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-AATGTAT-TTTTGATGGA-----------------AGCAAGA-AATTTCGATCC----GAA---------------CTTCCAGATT--TGT-----AGCGGTCCA-A------GA-C-----TAGACCGGTACA-----------A-GTTTTTT----AAA-----------CT----TT------GGATGGAA----AACCAT-------------TATCACTCTTGAGGAAAA-------------------------CTTCCACCCAATGCTATTT----------TGACTGG--ACAAAAGA------------------------CGGTAGAA-TTTTTTCCCCATTTTTGTTTAA---TTTTTCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTATTTGG-TAAATAACTG--------TTTTTTTT-----CTCTTTTCAACAGGCTGTATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAGAATCCTACGGAAGCGGAGCTCCAGGACATGATAAATGAAGTTGATGCGGATGGC-AACGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGAAAGATGAAGGACACTGACTCCGA-GGAGGAACTA Costus_varzearum_WJK945379 ????????????????????????GCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGCAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG----T---TTTTTTTT---AACTCGTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGA?????????????????????????????? Costus_villosissimus_KMN632 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGC-----------------------------------------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG---TT---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_vinosus_M9568 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG----T---TTTTTTTT---AACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_wilsonii_M9507 ????????????????????????????CTG-AGCATTGGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCTCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_woodsonii_CS01264 ?TTGG-TAATTGTTTA-ATATATTGCATCTG-AGCATTAGGCA-TTTTCATGCTCAGA-TTTGTACTATTTGC----------------------TCTTC-TTATG--CAATTAT-GATGTAT-TTTTAATGGA-----------------AGCAAGA-AATTTCGATCC----CAA---------------CTTTCGGATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCATCTG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Costus_zingiberoides_BTM860001 ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????ATT--TAT-----ACTGGTCCA-ATA-CTAGA-CGG--CTAGACCGGTACAAATTCGG-AGCA-GTTTTTT----AAA-----------CT----TT------GGATGGAA----GACCAT-------------TATCACTCTTTAGGAAAA-------------------------CTTCCACCCAATACTATTT----------TGACTGG--ACAAAAGA------------------------AAGTAGAA--TTTTTCCCCATTTTTGTTTAA---TTTTCCTATATT--TCTAACTCAT{CT}TG-CATAATGTATTCCAA-CAGCTTAAGAT----TACAAGTAG----GCATAAGATTTTGCCCCAAAGCTCTGCGGTCTTTGG-TAAATAACTG--------TTTTTTTT-GGAACTCTTTTCAACAGGCTGCATTACTACCAAGGAGCTTGGTACTGTGATGCGTTCTCTGGGTCAAAATCCTACGGAAGCGGAGCTCCAGGATATGATAAATGAAGTTGATGCGGATGGC-AATGGGACAATCGACTTT-CCTGAGTTTCTCAATCTGATGGCTCGGAAGATGAAGGACACTGATTCTGA-GGAGGAACTA Dimerocostus_strobilaceus_CS01272 ??????????????????????????????????????????TCTTTT--TGTTTGAACTTTGAATT-------------------GAGTTTGGG-CT-CATGATGTTCAATGATGGA-GTGGACCCTAATTGATCG---TTCTTTTTCT-ACCATGTTAGTTT-GATCC-------------------------TCGG-TTT-T-------TC-ATCACA--TA-GATGATTGGTTAT-TTCTTGTAGAGATT--GAATTA---TTCTT----AAAACATAT---G-CT-GCATT------GGATG-AATTTT--CCTTG-T--------GCTAAC------TAAGAAAA-----------------------------------------TTTTCAA------TGACT-------------------------------------A-T-GAA---GA-TCCTCAAGCTTG--------------------AA---AACTCTTCAGCCACAATTTATTT-AC-CAGTTT-----------CAAGTAGCTATGGAGAAAATTTCA-TGTATTGCT--AC---------A-AATTAAGGG--TTTAA-TTTTCCTATGGAA----TTCCTACAGGCTGCATCACGACCAAGGAGCTTGGAACTGTGATGCGTTCTTTGGGTCAGAACCCTACTGAAGCAGAACTGCAGGATATGATAAATGAGGTTGATGCTGATGGA-AATGGAACAATCGACTTC-CCTGAATTTCTTAACTTAATGGCTCGCAAGATGAAGGATACTGATTCTGA-GGAGGAGCTA Monocostus_uniflorus_WJK750065 TTGGG-----------------------------------------------CTCA-----TG----ATGT-----------TCAA-TG-ATGGA----G-TGGA-CCTAATTGA----------------------TC?TTCTTTTTCTA-CCATGTTAGTTT-GA--------------------------TCTCGG-T---TTT-----TC-ATCACATA?ATG--G-TTGGTT?T-TTCT?GTAGAGATT--GAATTA---TTCTT----AAAA----------C---------------AT------------ATGCT----------------GCATTGATGAA------------------------------------------TTTTCA----TTGTG-CT------AA----------------------------CT-AAGAA-AA-TTTTC-AATG-AA---TA----TGTAGATCC-TCAAGCT---TGA-AAACT-C-TTCAGCCACAATTTATTTACCAGT---TTCAAGTAGCTATGGAGAAAATTTCA-TGTATTGCT--AC---------A-AATTAAGGG--TTTAATTTTCCTAT-GGAA----TTCCTACAGGCTGCATCACGACCAAGGAGCTTGGAACTGTGATGCGTTCTTTGGGTCAGAACCCTACTGAAGCAGAACTGCAGGATATGATAAATGAGGTTGATGCTGATGGA-AATGGAACAATCGACTTC-CCTGAATTTCTTAACTTAATGGCTCGCAAGATGAAGGATACTGATTCTGA-GGAGGAGCTA Tapeinochilos_queenslandia_Davis_B68168 ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GAGA-TTT--ATT-----------------------C-TTAGTATTAATATGAATGACTGGT-----TATGTA----GG--CT---CCCC------TTT-GAT---ATTTTATTTGATAAG-TATGTAGAGTCA--CA----------ATGG----------TTG-----------------AAGATT---AAAAGATGGGCAAAAACTTGGTCCAAATTGTT----CC-ATATTATTT---ATTCTTT----TGGTATCAACAGGCT---------------GTAT---CACTACAA-AAGACTGGTTATGTAGGCTCCC---GTTTGATATTTT-----ATTTGATAAG-TATGTAGAGTCACAA-TGGTT---GAT----TAAAAG-GT----GGACAAAAATTTGGTCCAAATT------G--TT-CCATA--TTA------TT---TATTCTTTTGG------TGTCAACAGGCTGTATCACCACAAAAGAACTTGGGACTGTCATGCGTTCTCTGGGGCAGAACCCAACAGAAGCAGAATTACAGGACATGATAAACGAAGTTGACGCAGATGGT-AATGGCACAATTGACTTT-CCTGAGTTTCTTAATCTGATGGCTCGCAAAATGAAGGACACTGACTT?????????????? ; END; [ The following blocks are output data for analysis step 14395 ] BEGIN TREES; TITLE Costus_CaM_131001_ML; LINK TAXA = TaxaForAnalysisStep14395; TREE ML_tree_of_Costus_CaM = [&R] (Chamaecostus_lanceolatus_pulchriflorus_RB550388:0.010379,(Chamaecostus_subsessilis_RB584183:0.006251,Chamaecostus_cuspidatus_RB584184:0.001712):0.002523,(Tapeinochilos_queenslandia_Davis_B68168:0.03995,((Monocostus_uniflorus_WJK750065:0.057447,Dimerocostus_strobilaceus_CS01272:0.013637):0.104011,((Costus_lucanusianus_M10000:0.0,'Costus lucanusianus (yellow) Breteler5297 ':0.0):0.0,(Costus_deistelii_M9298:0.0,(Costus_aff._dubius_L920048:0.0,(Costus_aff._phyllocephalus_BB870057:9.72E-4,(((Costus_afer_M10205:0.004759,(Costus_dubius_M10206:0.030686,Costus_aff._afer_WJK943683:0.021663):0.014613):0.009349,((Costus_aff._tappenbeckianus_Tva3675:0.0041,(Costus_aff._tappenbeckianus_WJK943697:0.004545,(Costus_aff._tappenbeckianus_20050100002:0.001792,Costus_phaeotrichus_CS02323:0.00177):0.0):0.001754):0.003563,(Costus_aff._tappenbeckianus_20050100001:0.001106,(((Costus_aff._phyllocephalus_M10389:0.03342,Costus_gabonensis_M10291:0.004079):8.7E-4,(Costus_aff._ligularis_19980923003:0.008775,(Costus_aff._ligularis_M10226:0.0,Costus_loangensis_M10184:0.0):0.005361):0.001242):0.010626,(Costus_letestui_CS02331:0.012507,(Costus_talbotii_20030109009:0.004849,(Costus_lateriflorus_M10331:0.0,Costus_liliaceus_M9995:0.001668):0.005937):0.001857):0.002803):0.004854):0.001609):0.002058):0.002727,(((((Costus_chartaceus_WJK903124:0.00239,(Costus_lima_var._scabremarginatus_BTM750400:0.0,Costus_stenophyllus_L750305:0.001676):0.0):8.0E-4,(Costus_leucanthus_19961105001:0.0,Costus_glaucus_Delft46325:0.0):0.0):0.0,((Costus_guanaiensis_var._tarmicus_KMN2811:0.0,(Costus_erythrothyrsus_M9317:0.001687,Costus_quasiappendiculatus_CS99233:8.04E-4):0.0):0.0,(Costus_claviger_M9306:8.22E-4,(Costus_guanaiensis_var._macrostrobilus_CS00253:8.02E-4,(Costus_wilsonii_M9507:8.3E-4,Costus_ricus_R2970:0.00216):0.0):0.0):0.0):7.99E-4):0.0,(((Costus_dirzoi_19960228002:0.0,Costus_pictus_WJK943691:0.001609):8.03E-4,((Costus_nitidus_M9524:0.006616,(Costus_malortieanus_M9791:0.013964,(Costus_osae_M9501:2.9E-5,Costus_amazonicus_M9036:0.0):0.00104):0.001604):0.002154,(Costus_curvibracteatus_M9381:8.02E-4,Costus_pulverulentus_WJK943680:0.0):0.0):7.98E-4):0.0,((Costus_guanaiensis_var._guanaiensis_R2666:0.001777,(Costus_laevis_CS01257:0.0,((Costus_vinosus_M9568:0.0,(((Costus_plicatus_WJK945376:7.99E-4,Costus_zingiberoides_BTM860001:0.0):1.0E-6,(Costus_arabicus_CS98193:9.04E-4,Costus_spiralis_M9335:0.0):8.0E-4):0.0,(Costus_longibracteolatus_R3003:0.001602,(Costus_varzearum_WJK945379:8.54E-4,(Costus_albiflos_M9968:0.004305,(Costus_maboumiensis_M10227:0.0,(Costus_barbatus_CS01256:8.21E-4,Costus_dinklagei_TvA3549:0.0):0.002401):0.002409):0.002567):8.54E-4):0.0):0.0):0.0,(Costus_villosissimus_KMN632:0.0,((Costus_comosus_var._bakeri_19990126011:0.0,Costus_beckii_CS99232:8.28E-4):0.0,(Costus_bracteatus_M9409:0.0,((Costus_productus_R2693:8.03E-4,Costus_spicatus_WJK027143:8.63E-4):0.0,(Costus_scaber_R2253:8.02E-4,(Costus_asplundii_R2976:0.0,Costus_geothyrsus_BS6782:8.46E-4):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0,(Costus_woodsonii_CS01264:0.0,Costus_aff._ligularis_20050100003:0.0):0.0):0.0):0.0):0.0,(Costus_erythrophyllus_R2847:2.33E-4,Costus_lima_R3014:0.001172):0.001045):0.001685):6.41E-4):8.16E-4):8.12E-4):0.003265):0.054685):0.116131):0.039129); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr76998] END;