#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 19, 2025; 22:30 GMT

TreeBASE (cc) 1994-2008

Study reference:
Meeboon J., Siahaan S.A., & Takamatsu S. 2015. Notes on powdery mildews (Erysiphales)
in Japan: IV. Phyllactinia, Parauncinula and Sawadaea. Mycoscience, 56(6):
590-596.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S16275]

[ The following blocks are input data for analysis step 14441 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep14441;
        DIMENSIONS NTAX=6;
        TAXLABELS
            Phyllactinia_mali_ex_Crataegus_AB080523
            Phyllactinia_mali_ex_Crataegus_AB080559
            Phyllactinia_mali_ex_Mespilus_AB080556
            Phyllactinia_moricola_ex_Morus_AB080540
            Phyllactinia_pyri_serotinae_ex_Aria_MUMH3511
            Phyllactinia_pyri_serotinae_ex_Pyrus_AB080521
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M23778]

	TITLE 'Phyllactinia pyri-serotinae ITS';
	LINK TAXA = TaxaForAnalysisStep14441;
	DIMENSIONS NCHAR=591;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                                         10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590 ]
[                                                          .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         . ]
Phyllactinia_mali_ex_Crataegus_AB080523           CAGAGCGTGAAGACTCTCGGCCCCCTCCCATCCATGGCGCAAGCCGGTGCGAAGGCAGGGG--AAACATGCCGGAGTCGACCCTCCCACCCGTGTCGATGTTATCTCCTGTTGCTTTGGTGGGCCGGGGGCCGCCTAGCGGACCCCGCTGGCCCTGCGAGGGGCTAGAGCGTGCCTGCCAGAGAAAATTTTGACAA-TCGTTTGATTGGAGGAAGTCTGAGCA-GCCCCAGTGGGGGAACACACAATTTAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCAAAACAACCCCTCAAGCCAGTCTGGCTTGGTCTTGGGGTCCGCCCGCGGCTGTGCGGCGGCCCTTAAATCCAGTGGCGGTACCGGTAGTGCTCTCCGCGTAGTCACGATCTCGCGATAGGGTGGCGCTGGATCCAGCCAGAAGACGA?GACGCCGCCCCTGTGCGGTGCCTTCTTTCA-ATGG
Phyllactinia_mali_ex_Crataegus_AB080559           CAGAGCGTGAAGACTCTCGGCCCCCTCCCATCCATGGCGCAAGCCGGTGCGAAGGCAGGGGG-AAACATGCCGGAGTCGACCCTCCCACCCGTGTCGATGTTATCTCCTGTTGCTTTGGTGGGCCGGGGGCCGCCTAGCGGACCCCGCTGGCCCTGCGAGGGGCTAGAGCGTGCCTGCCAGAGAAAATTTTGACAA-TCGTTTGATTGGAGGAAGTCTGAGCA-GCCCCAGTGGGGGAACACACAATTTAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCAAAACAACCCCTCAAGCCAGTCTGGCTTGGTCTTGGGGTCCGCCCGCGGCTGCGCGGCGGCCCTTAAATCCAGTGGCGGTACCGGTAGTGCTCTCCGCGTAGTCACGATCTCGCGATAGGGTGGCGCTGGATCCAGCCAGAAGACGACGACGCCGCCTT-GTGCGGTGCCTTCTTTCA-ATGG
Phyllactinia_mali_ex_Mespilus_AB080556            CAGAGCGTGAAGACTTT-GGCCCCCTCCCATCCATGGCGCAAGCCGGTGCGAAGGCAGGGGG-AAACATGCCGGAGTCGACCCTCCCACCCGTGTCGATGTTATCTCCTGTTGCTTTGGTGGGCCGGGGGCCGCCTAGCGGACCCCGCTGGCCCTGCGAGGGGCTAGAGCGTGCCTGCCAGAGAAAATTTTGACAA-TCGTTTGATTGGAGGAAGTCTGAGCA-GCCCCAGTGGGGGAACACACAATTTAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCAAAACAACCCCTCAAGCCAGTCTGGCTTGGTCTTGGGGTCCGCCCGCGGCTGCGCGGCGGCCCTTAAATCCAGTGGCGGTACCGGTAGTGCTCTCCGCGTAGTCACGATCTCGCGATAGGGTGGCGCTGGATCCAGCCAGAAGACGACGACGCCGCCTTTGTGCGGTGCCTTCTTTCA-ATGG
Phyllactinia_moricola_ex_Morus_AB080540           CTGAGCGTGAAGACTCTCGGTCCCCCGCCCCATTGG-TGCAAGCCAGTGCGAGGGGGG-----AGCATGGCCGGAGTCGACCCTCCCACCCGTGTCGATAAAAACGTCTGTTGCTTTGGTAGGCCGGGGCCCGCCTGGCGGATCCCGCTGGCCTTTGAT--GGCTGGAGCGTGCCTGCCAGAGAAA-GTTGGACAA-TCGTGTGATT-GATGAAGTCTGAGCAA---CC-AAGTGGGAAA------TT-AGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCAAAACAACCCCTCAAGTCGCTCTGGCTTGGTCTTGGGGCCCGCCCGCGACAGCGTGGCGGCCCTTAAATCTAGTGGCGGTGCCGGTGGTGCTCTCCGTGTAGTCACGTTCTCGCGACAGGGCAGCACTGGACCCAGCCAAAA--GACA-AC-C-TG-TGCGTCTGTCGCACGCTATCT-ATGG
Phyllactinia_pyri_serotinae_ex_Aria_MUMH3511      -----CGTGAAGACTCTCGGGCCCCCCA--GCCATGGCGCAAGCCAGTGCGGCGAGGGGGGGGAATCATGCCGGAGTCGACCCTCCCACCCGTGTCGATGTTATCTCCTGTTGCTTTGGTGGGCCGGGGGCCGCCTAGCGGACCCCGCTGGCCCTGCGC-GGGCTAGAGCGTGCCTGCCAGAGAAA-TCTTGACAACTCGTTTGATTTGAGGAAGTCTGAGCAA-CCCCAGTGGGGGAACACACAATTTAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCAAAACAACCCCTCAAGCCAGTCTGGCTTGGTCTTGGGGTCCGCCCGCGGCTGCGCGGCGGCCCTTAAAGCCAGTGGCGGTACCGGTAGTGCTCTCCGCGTAGTCACGATCTCGCGGCAGGGTGGCACTGGATCCAGCCAGAAGACGATGACGCCGCCCTCGGTGCGGTGTCTGTTTCACATGG
Phyllactinia_pyri_serotinae_ex_Pyrus_AB080521     CTGAGCGTGAAGACTCTCGGGCCCCCCC--GCCATGGCGCAAGCCAGTGCGGCGAGGGGGGCGAATCATGCCGGAGTCGACCCTCCCACCCGTGTCGATGTTATCTCCTGTTGCTTTGGTGGGCCGGGGGCCGCCTAGCGGACCCCGCTGGCCCTGCGC-GGGCTAGAGCGTGCCTGCCAGAGAAA-TCTTGACAA-TCGTTTAATTTGAGGAAGTCTGAGCAAGCCCCCATGGGCGAACACACAATTTAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCAAAACAACCCCTCAAGCCAGTCTGGCTTGGTCTTGGGGTCCGCCCGCGGCTGCGCGGCGGCCCTTAAAGCCAGTGGCGGTACCGGTAGTGCTCTCCGCGTAGTCACGATCTCGCGGCAGGGTAGCACTGGATCCAGCCAGAAGACGATGACGCCGCCTTCGGTGCGGTGTCTGTTTCA-ATGG
;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions (CHARACTERS = 'Phyllactinia pyri-serotinae ITS') = 
		N: 1-591;
CODONPOSSET  CodonPositions (CHARACTERS = 'Phyllactinia pyri-serotinae ITS') = 
		N: 1-591;
END;
[ The following blocks are output data for analysis step 14441 ]
BEGIN TREES;
      TITLE 'Phyllactinia pyri-serotinae ITS';
      LINK TAXA = TaxaForAnalysisStep14441;
      TREE Fig._5 = [&R] (Phyllactinia_moricola_ex_Morus_AB080540,((Phyllactinia_pyri_serotinae_ex_Aria_MUMH3511,Phyllactinia_pyri_serotinae_ex_Pyrus_AB080521),(Phyllactinia_mali_ex_Crataegus_AB080523,Phyllactinia_mali_ex_Mespilus_AB080556,Phyllactinia_mali_ex_Crataegus_AB080559)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr77167]


END;