#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 17, 2024; 2:57 GMT TreeBASE (cc) 1994-2008 Study reference: De errasti A., De beer Z.W., Rajchenberg M., Coetzee M., Wingfield M.J., & Roux J. 2014. Ceratocystis decorticans sp. nov. associated with dying Nothofagus in Patagonia. Mycologia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S16456] [ The following blocks are input data for analysis step 14809 ] BEGIN TAXA; TITLE TaxaForAnalysisStep14809; DIMENSIONS NTAX=27; TAXLABELS Ceratocystis_adiposa_AF043606 Ceratocystis_bhutanensis_AY528960 Ceratocystis_coerulecens_AY214001 Ceratocystis_decorticans_BAFC4488 Ceratocystis_decorticans_BAFC4489 Ceratocystis_decorticans_BAFC4490 Ceratocystis_decorticans_BAFC4491 Ceratocystis_decorticans_BAFC4493 Ceratocystis_decorticans_BAFC4494 Ceratocystis_douglasii_U75626 Ceratocystis_fagacearum_FJ347031 Ceratocystis_inquinans_EU588588 Ceratocystis_laricicola_AF043600 Ceratocystis_microbasis_EU588594 Ceratocystis_moniliformis_AF043597 Ceratocystis_moniliformopsis_AY528999 Ceratocystis_norvegica_DQ318209_T Ceratocystis_oblonga_EU245021 Ceratocystis_omanensis_DQ074743 Ceratocystis_polonica_AF043601 Ceratocystis_savannae_GU078454 Ceratocystis_sp._BAFC4492 Ceratocystis_sublaevis_FJ151430_ Ceratocystis_sumatrana_EU588590 Ceratocystis_tribiliformis_AY529004 Ceratocystis_virescens_AF043603 Thielaviopsis_ceramica_EU245022_ ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M24400] TITLE Ceratocystis_decorticans_ITS; LINK TAXA = TaxaForAnalysisStep14809; DIMENSIONS NCHAR=418; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Ceratocystis_adiposa_AF043606 CCATTTGTGAACATAC-CTATCTT----------TACTGCTT-TGGCGTGGTCCTTC-----------GGGATTGTGCCGGTAGTATTTACAA---ACTC-TTTTAAT-TTCTAGAGAATT---ATTCATTGCTGAGTTGCATTTAAC--AAATAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCTGTC-------AAGCGGGCCGCCGAAATGCATCGGCTGTAGTATTTGCAGCTTCCCTGCGTAGTA Ceratocystis_bhutanensis_AY528960 CCATTTGTGAATTTAC-CAAACAT---------GAACTGCAT-CGGCGGGTCT--------------------CCCGCCAGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGATTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGCATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_coerulecens_AY214001 CCATATGTGAACATAC-CTTTTT-----------AGCTGCTT-TGGCAGGCTTGGGTTTGAAAAAAACAAGT--CTGCCGGCAGTATATAAAAAACACTCTTTAATAT-TTCTAGAGAATTTATTTTCATTGCTGAGTGGCAT-TAACATAATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCGTCTTTTTTGTTTGCGGGCCGCCGAAATGCATCGGCTGTTATATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_decorticans_BAFC4488 CCATTTGTGAACTTAC-CTTCTTG----------TACTGCTT-TGGTGGAACTCTTTT----------GGGGTTTCGCCGGTAGTATTTAAAA---ACTC-TTTATAT-TTCTATAGAATT---ATTCATTGCTGAGTTGCATTTAATA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAGCAGTATTCTGCTAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCGTT--------ATGCGGGCCACCGAAATGCATCGGCTGTAGTATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_decorticans_BAFC4489 CCATTTGTGAACTTAC-CTTCTTG----------TACTGCTT-TGGTGGAACTCTTTT----------GGGGTTTCGCCGGTAGTATTTAAAA---ACTC-TTTATAT-TTCTATAGAATT---ATTCATTGCTGAGTTGCATTTAATA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAGCAGTATTCTGCTAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCGTT--------ATGCGGGCCACCGAAATGCATCGGCTGTAGTATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_decorticans_BAFC4490 CCATTTGTGAACTTAC-CTTCTTG----------TACTGCTT-TGGTGGAACTCTTTT----------GGGGTTTCGCCGGTAGTATTTAAAA---ACTC-TTTATAT-TTCTATAGAATT---ATTCATTGCTGAGTTGCATTTAATA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAGCAGTATTCTGCTAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCGTT--------ATGCGGGCCACCGAAATGCATCGGCTGTAGTATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_decorticans_BAFC4491 CCATTTGTGAACTTAC-CTTCTTG----------TACTGCTT-TGGTGGAACTCTTTT----------GGGGTTTCGCCGGTAGTATTTAAAA---ACTC-TTTATAT-TTCTATAGAATT---ATTCATTGCTGAGTTGCATTTAATA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAGCAGTATTCTGCTAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCGTT--------ATGCGGGCCACCGAAATGCATCGGCTGTAGTATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_decorticans_BAFC4493 CCATTTGTGAACTTAC-CTTCTTG----------TACTGCTT-TGGTGGAACTCTTTT----------GGGGTTTCGCCGGTAGTATTTAAAA---ACTC-TTTATAT-TTCTATAGAATT---ATTCATTGCTGAGTTGCATTTAATA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAGCAGTATTCTGCTAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCGTT--------ATGCGGGCCACCGAAATGCATCGGCTGTAGTATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_decorticans_BAFC4494 CCATTTGTGAACTTAC-CTTCTTG----------TACTGCTT-TGGTGGAACTCTTTT----------GGGGTTTCGCCGGTAGTATTTAAAA---ACTC-TTTATAT-TTCTATAGAATT---ATTCATTGCTGAGTTGCATTTAATA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAGCAGTATTCTGCTAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCGTT--------ATGCGGGCCACCGAAATGCATCGGCTGTAGTATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_douglasii_U75626 CCATATGTGAACATAC-CCTTTT-----------AGCTGCTT-TGGCAGGCTTGG------TAAAAACAAGT--CTGCCGGTAGTATATAAAAAA-ACTCTTTAATAT-TTCTACAGAATTTA-TTTCATTGCTGAGTGGCATAAAACATAATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCATC--------TTGCGGGCCGCCGAAATGCATCGGCTGTTATATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_fagacearum_FJ347031 CCATTTGTGAACATAC-CATTTTTTTTTCTCTAATACTGCTT-TGGCAGGGACTTCTTTCTTCAGGGGATGTTTCTGCCAGTAGTATTTACAA---ACTCTTTTTAAT-TTCTAGAGAATT---ATTCATTGCTGAGTTGCATTTAACA-AAATAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAGCAGTATTCTGCTAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCCTTGCTTGGTGTTGGAGGACCCCGCTTGTCAC---AAGCGGGCCACCGAAATGCATCGGCTGTAGTATTTGCAGCTTCCCTGCGTAGTA Ceratocystis_inquinans_EU588588 CCATTTGTGAATTTAC-CAAACAT---------GAACTGCAT-CGGCGGGTCT--------------------CCCGCCAGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGAATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_laricicola_AF043600 CCATATGTGAACATAC-CTTTTTT----------AGCTGCTT-TGGCAGGTCTTG------GTAAAACAAGT-CCTGCCGGTAGTATTTAGAAAA-ACTCTTTAATAT-TTCTAGAGAATTTATATTCATTGCTGAGTGGCAT-TAACATAATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCA-GCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCATC--------TTGCGGGCCGCCGAAATGCATCGGCTGTTGAATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_microbasis_EU588594 CCATTTGTGAATTTAC-CAAACAT---------GAACTGCAT-CGGCGGGTCT--------------------CCCGCCAGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGAATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_moniliformis_AF043597 CCATTTGTGAATTTCCACAAACAT--------CGAACTGCGATTGGCGGGTCTCC------------------CCGCCCGGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGCATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_moniliformopsis_AY528999 CCATTTGTGAATTTAC-CAAACAT---------GAACTGCATATGGCGGGTCT--------------------CCCGCCAGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTATGCTTGGTGTTGGAGGACCTGTGCTAT------GCGCGGGCCTCTGAAATGTATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_norvegica_DQ318209_T CCATTTGTGAACATAC-CTTTTCT---------GTACTGCTT-TGGCAGATGTCTTC-----------GGATGTCTGCCGGTAGTATTTACAA---ACTC-TTTTAAT-TTCTAGAGAATT---ATTCATTGCTGAGTTGCATTTAAC--AAATAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAGCAGTATTCTGCTAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTTCGCTTGGTGTTGGAGGTCCCGCTGTCAC-----AAGCGGGCCGCCGAAATGCATCGGCTGTAGT-TCAAGAGCTTCCCTGCGTAGTA Ceratocystis_oblonga_EU245021 CCATTTGTGAATTTAC-CAAACAT---------GAACTGCAT-TGGCGGGGTCTC------------------CCCGCCGGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGCATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_omanensis_DQ074743 CCATTTGTGAATTTAC-CAAACAT---------GAACTGCAT-TGGCGGGTCT--------------------CCCGCCGGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTACCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCACTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGCATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_polonica_AF043601 CCATATGTGAACATAC-CTTTTTT----------AGCTGCTT-TGGCAGGTCTTG------GTAAAACAAGT-CCTGCCGGTAGTATTTAGAAAA-ACTCTTTAATAT-TTCTAGAGAATTTATATTCATTGCTGAGTGGCAT-TAACATAATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCA-GCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCATC--------TTGCGGGCCGCCGAAATGCATCGGCTGTTGAATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_savannae_GU078454 CCATTTGTGAATTTAC-CAAACAT---------GAACTGCAT-TGGCGGGGTCTC------------------CCCGCCGGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGCATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_sp._BAFC4492 CCATTTGTGAACTTAC-CTTCTTG----------TACTGCTT-TGGTGGAACTCTTTT----------GGGGTTTCGCCGGTAGTATTTAAAA---ACTC-TTTATAT-TTCTATAGAATT---ATTCATTGCTGAGTTGCATTTAATA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAGCAGTATTCTGCTAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTGTTGGAGGACCCGCGTT--------ATGCGGGCCACCGAAATGCATCGGCTGTAGTATTTGCAGCTTCCCTGTGTAGTA Ceratocystis_sublaevis_FJ151430_ CCATTTGTGAATTTAC-CAAACAT---------GAACTGCATACGGCGGGTCT--------------------CCCGCCAGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGTATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_sumatrana_EU588590 CCATTTGTGAATTTAC-CAAACAT---------GAACTGCAT-CGGCGGGTCT--------------------CCCGCCAGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGAATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_tribiliformis_AY529004 CCATTTGTGAATTTAC-CAAACAT---------GAACTGCATACGGCGGGTCT--------------------CCCGCCAGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGTATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA Ceratocystis_virescens_AF043603 CCATATGTGAACATAC-CTATT------------AGCTGCTT-TGGCAGGCTTGG-------TAACACAAGT--CTGCCGGTAGTATTTTAAA---ACTCTTTTTTTTATTCTAAAGAATT---ATTCATTGCTGAGTGGCAT-TAACATAATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCCGCTTGGTGTTGGAGGACCTGTTGTTTT-----CAACAGGCCACCGAAATGCATCGGCTGTTATACTTGCAGCTTCCCTGTGTAGTA Thielaviopsis_ceramica_EU245022_ CCATTTGTGAATTTAC-CAAACAT---------GAACTGCAT-CGGCGGGTCT--------------------CCCGCCAGCAGTACTCTTGA---ACTCGTTTTTA---TATAAAGAATTT--ATTCATTGCTGAGTAGCATTTTATA-AATGTATTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCAGCAGTACTCTGCTGGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGCTCTGCTTGTTGTTGGAGAGCCTGTGCTAT------GCGCGGGCCTCTGAAATGCATCGGCTGTGTTACATGCAGTTTCCCTGTGTAGTA ; END; [ The following blocks are output data for analysis step 14809 ] BEGIN TREES; TITLE ITS_Ceratocystis_decorticates_ML_bootstrap; LINK TAXA = TaxaForAnalysisStep14809; TREE ITS = [&U] ((((Ceratocystis_moniliformopsis_AY528999:0.004642,((Ceratocystis_bhutanensis_AY528960:0.002817,(Thielaviopsis_ceramica_EU245022_:0.0,((Ceratocystis_sublaevis_FJ151430_:0.0,Ceratocystis_tribiliformis_AY529004:0.0)0.6500:0.0,(Ceratocystis_microbasis_EU588594:0.0,(Ceratocystis_inquinans_EU588588:0.0,Ceratocystis_sumatrana_EU588590:0.0)0.2200:0.0)0.6500:0.002795)0.2900:0.002794)0.0200:0.0)0.5700:0.002932,(Ceratocystis_omanensis_DQ074743:0.00566,(Ceratocystis_moniliformis_AF043597:0.014696,(Ceratocystis_savannae_GU078454:0.0,Ceratocystis_oblonga_EU245021:0.0)0.9400:0.00866)0.2100:0.0)0.4000:0.002682)0.5400:0.010353)1.0000:0.162198,(Ceratocystis_decorticans_BAFC4491:0.0,(Ceratocystis_decorticans_BAFC4494:0.0,(Ceratocystis_decorticans_BAFC4490:0.0,(Ceratocystis_decorticans_BAFC4488:0.0,(Ceratocystis_decorticans_BAFC4493:0.0,(Ceratocystis_sp._BAFC4492:0.0,Ceratocystis_decorticans_BAFC4489:0.0)0.1400:0.0)0.0400:0.0)0.0200:0.0)0.0000:0.0)0.0900:0.0)0.9900:0.027424)0.6000:0.021302,(Ceratocystis_fagacearum_FJ347031:0.026498,(Ceratocystis_adiposa_AF043606:0.023943,Ceratocystis_norvegica_DQ318209_T:0.036743)0.2900:0.00316)0.8900:0.032098)0.8200:0.011672,(Ceratocystis_virescens_AF043603:0.053244,((Ceratocystis_coerulecens_AY214001:0.005546,Ceratocystis_douglasii_U75626:0.009489)0.9600:0.009373,(Ceratocystis_polonica_AF043601:0.0,Ceratocystis_laricicola_AF043600:0.0)0.9900:0.012495)0.7400:0.009798)0.8200:0.030915); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr78266] END;