#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on March 28, 2024; 15:16 GMT TreeBASE (cc) 1994-2008 Study reference: Crous P.W., Groenewald J.Z., & Hill C. 2002. Cylindrocladium pseudonaviculatum sp. nov. from New Zealand, and new Cylindrocladium records from Vietnam. Sydowia, 54: 23-33. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S905] [ The following blocks are input data for analysis step 1511 ] BEGIN TAXA; TITLE TaxaForAnalysisStep1511; DIMENSIONS NTAX=33; TAXLABELS Cylindrocladium_candelabrum_STE_U_1674 Cylindrocladium_flexuosum_STE_U_2536 Cylindrocladium_floridanum_ATCC_18882 Cylindrocladium_gordoniae_STE_U_3136A Cylindrocladium_gracile_PC_551197 Cylindrocladium_gracile_STE_U_1586 Cylindrocladium_gracile_STE_U_623 Cylindrocladium_graciloideum_STE_U_1153 Cylindrocladium_hawksworthii_MUCL_30866 Cylindrocladium_insulare_STE_U_3199 Cylindrocladium_insulare_STE_U_3211 Cylindrocladium_insulare_STE_U_3219 Cylindrocladium_insulare_STE_U_616 Cylindrocladium_insulare_STE_U_768 Cylindrocladium_insulare_STE_U_954 Cylindrocladium_mexicanum_STE_U_927 Cylindrocladium_naviculatum_STE_U_627 Cylindrocladium_naviculatum_STE_U_628 Cylindrocladium_parasiticum_CBS_190.50 Cylindrocladium_pauciramosum_STE_U_3207 Cylindrocladium_pauciramosum_STE_U_416 Cylindrocladium_pauciramosum_STE_U_972 Cylindrocladium_pseudogracile_AR_2677 Cylindrocladium_pseudonaviculatum_STE_U_3399 Cylindrocladium_pseudonaviculatum_STE_U_3570 Cylindrocladium_pseudonaviculatum_STE_U_3613 Cylindrocladium_quinqueseptatum_STE_U_516 Cylindrocladium_scoparium_ATCC_38227 Cylindrocladium_scoparium_ATCC_46300 Cylindrocladium_scoparium_STE_U_1720 Cylindrocladium_scoparium_STE_U_1722 Cylindrocladium_spathulatum_ATCC_62616 Fusarium_subglutinans_NRRL_22016 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M388] TITLE 'beta-tubulin'; LINK TAXA = TaxaForAnalysisStep1511; DIMENSIONS NCHAR=560; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .] Cylindrocladium_candelabrum_STE_U_1674 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCATCGCTTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAT--CATGA-CGAGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTTT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTACCC-TTCTCAACT-CCGACCAAA-TTCT-CACGAC-GAGATTCACTGACAGTTGTCCAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACTCGAAGCACTCCC-TT-GACCGAGA-AGCACAA---T-CCGACTCACACCA---TCATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_flexuosum_STE_U_2536 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCGCTCCGACGACAA--CAAA-GCCGTAGCCTC-ACGAA--TATGG-CGAGATAC-C-AGA--ACAAGATTGCTAACCATGT-GCTTATTTCT-CGATTATAGGTCCACCTCCAGACCGGCCAGTGCGTAAGTACTC-TTCTCAACT-CCAACAAAA-TTCT-CATGAC-GAGATTTACTGACGGTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGAGCACTCCC-TT-GATCGAGA-AACATAA---A-CAAACTCACAC------CATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_floridanum_ATCC_18882 GCGTGCCTTTGTTGCTGCCCCTGAGCGTACCCCGCCGACCCGGTTTCCACCGCTTCGACAACAA--CAAA-GCTCGATGGCT-TCAAG--CACAA-TGCGATAT-T-GGAGGACAAGGTTGCTAACTATCGTTTTTCTCTCT-CAATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGATAGTTCCCAACTTCAAAAAAAAAATCT-ACCGTG-AAGATTGACTGACACTTATGGCT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTTTGGCGAGCACGGCCTCGACAGCAATGGTGTCTACAACGGTACCTCCGACCTCCAGTTGGAGCGTATGAACGTCTACTTCAACGAGGTATGTGGTCAAATT---GCAACA---TCGC-TTTGG-CGAGAATATAGAGCCAG-CA--CTCACAC------CATCT--AGGCTTCCGGCAACAAGTATGTCCCTCGCGCTGTCCTCGTCGAT-TTGAGCCCGGT-CCATGGATGCCGTCCGTGCCGGCCCTTT-GGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_gordoniae_STE_U_3136A GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGTCCCGGTTTCCACCGCTTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-CGAGATAT-C-AGG--ACGAGATTGCTAACCGTGT-GCTTCTTTCT-CAATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-CTCTCAACT-CCAACAAAA-TTAT-CACGAC-GAGATTCGCTGACAGTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAATGTCTACTTCAACGAGGTATGTG---AAAACCACGTGGTGCAACCCCCTT-GGCCGAGA-AGCACAA---G-CAAACTGACAC-AC---CATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCCTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_gracile_PC_551197 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCGCTCCGACGACAA--CAAA-GCCACAGCCTC-ACGAA--CATGG-CGAGATAT-C-AGA--ACAAGATTGCTAACCATGT-CCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGAT-ATTCTCAACT-CCAACAAAA-TTCT-CACGAC-GAGATTCACTGACATTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGAGCACTCCC-TT-GATCGAGA-AGCACAA---G-CAAACTCACAC-AC---CATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGTCCCGACAACTT Cylindrocladium_gracile_STE_U_1586 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCGCTCCGACGACAA--CAAA-GCCGCAGCCTC-ACGAA--CATGG-CGAGATAT-C-AGA--ACAAGATTGCTAACCATGT-CCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGAT-ATTCTCAACT-CCAACAAAA-TTCT-CACGAC-GAGATTCACTGACATTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGAGCACTCCC-TT-GATCGAGA-AGCACAA---G-CAAACTCACAC-AC---CATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGTCCCGACAACTT Cylindrocladium_gracile_STE_U_623 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCGCTCCGACGACAA--CAAA-GCCGCAGCCTC-ACGAA--CATGG-CGAGATAT-C-AGA--ACAAGATTGCTAACCATGT-CCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGAT-ATTCTCAACT-CCAACAAAA-TTCT-CACGAC-GAGATTCACTGACATTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGAGCACTCCC-TT-GATCGAGA-AGCACAA---G-CAAACTCACAC-AC---CATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGTCCCGACAACTT Cylindrocladium_graciloideum_STE_U_1153 ACGTGCCTTGGTTGCTGCCCCTGATTCTACCCCGCCGTCCCGGTTTCCACCGCTTCGACGAAAA--CAAG-GCCGCAGCCTC-AAGAA--CATGA-CGAGATAT-C-AGA--ACAAGATTGCTGACCATGT-GCTTCTTTCT-CAATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TTCTCAACT-CCAACAAAA-TTCT-CGCGGC-CAGATTCGCTGACAGTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACA-GA-GTAC-TTCGTTTG-TCGGGA-AGATCAA---G-CGAACTCACAC-AC---CATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGTCCCGACAACTT Cylindrocladium_hawksworthii_MUCL_30866 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACCTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAACT-CCAACAAAA-TTCT-CACGAC-CAGATTCACTGACAGTTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGTGTACTCAC----G-CCGAGA-GGCACAA---G-CAAACTGACAC------TATGT--AGGCTTCTGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_insulare_STE_U_3199 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACCTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAACT-CCAACAAAA-TTCT-CACGAC-CAGATTCACTGACAGTTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGTGTACTCAC-AC-G-CCGAGA-GGCACAA---G-CAAACTGACAC------CATGT--AGGCTTCTGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_insulare_STE_U_3211 GCGTGTGTTCGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACCTCGA---CAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCATGT-GCTTCTTTCT-CGATTGTAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAGCT-CCAAGAAAA-TTCT-CACGAC-CGGATTCACTGACAGTTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACACTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGTGTACTCAC-TC-G-CCGATA-GGCACAA---G-CAAACTGACAC------CATGT--AGGCTTCTGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGTCCCGACAACTT Cylindrocladium_insulare_STE_U_3219 GCGTGTGTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACCTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAACT-CCAACAAAA-TTCT-CACGAC-CAGATTCACTGACAGTTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGTGTACTCAC-AC-G-CCGAGA-GGCACAA---G-CAAACTGACAC------CATGT--AGGCTTCTGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_insulare_STE_U_616 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACCTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCCTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAACT-CCAACGGAA-TTCT-CACGAC-CAGATTCACTGACAGTTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAATCACGCGGTGTACTCAC-AC-G-CCGAGA-GGCACAA---G-CAAACTGACAC------CATGT--AGGCTTCTGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTTCGCCCCGACAACTT Cylindrocladium_insulare_STE_U_768 ACGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACCTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAACT-CCAACAAAA-TTCT-CACGAC-CAGATTCACTGACAGTTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCGCGCGGTGTACCCAC-AC-G-CCGAGA-GGCACAA---G-CAAACTGACACC-------TGT--AGGCTTCTGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTT-CGCCC-GACAACTT Cylindrocladium_insulare_STE_U_954 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACCTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCGTCT-GCTTCTTTCT-CGACTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAACT-CTAACAAAA-TTCT-CACGAC-CAGATTCACTGACAATTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTGTGTG---AAAACCGCGCGGTGTACTCAC-AC-G-CCGAGA-GGCACAA---G-CAAACTGACAC------CATGT--AGGCTTCTGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_mexicanum_STE_U_927 GCGTGCCTTTGTTGCTGCCCCTGGTTCTACCCCGCCGTCCCGGTTTCCACCGCTACAACGACAA--CAAA-GCCGCAGCCTCGAC-AA--CATGAGCAAGATAT-C-AGG--ATATGATGGCTAACCGTGT-GTTTCTTCCT-CAATTCTAGGTTCACCTCCAGACCGGTCAGTGCGTAAGTACTC-CTTGCAACT-CCAACAA-CTTTCT-CACGGCCATGAT-CGCTGACAGACGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTA---AAAACCGCTCCAAGAAATTTC-TTTG-TCGGGA-CGCCCAA---A-CAAACTCACA------TCATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCTGGTCCCTTCGGTCAGCTCTTCCGTCCCGACAACTT Cylindrocladium_naviculatum_STE_U_627 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGACCCGAATTCTGCCGCCTCGACAACAA--CAAA-GCCCGACAACC-TCGAG--CGTGA-TGTGACATAG-GGG-AACAAGTTTGCTGACCATGT-GCTTTTT----CAATTCTAGGTTCACCTCCAGACCGGTCAGTGCGTAAGTATTTAATC-CGACT-CCAG-AA---TTCGTCGTGAT-GAGATTTGCTGAC-CTTGGTGGACAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTCTACAACGGCACCTCTGAGCTCCAGCTCGAGCGCATGAACGTCTACTTCAACGAGGTAGGTAGTGGG------CTAGCACACCCA--TTTG-TCAAGAAA----CATTGAACAAACTGACAGACCGCAACCGCACAGGCTTCCGGCAACAAGTATGTCCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAGCTCTT??????????????? Cylindrocladium_naviculatum_STE_U_628 GCGTGCCTTTGTTGTTGCCCCTGATTCTACCCCGCCGACCCGAATTCTGCCGCCTCGACAACAA--CAAA-GCCCGACAACC-TCGAG--CGTGA-TGTGACATAG-GGG-AACAAGTTTGCTGACCATGT-GCTTTTT----CAATTCTAGGTTCACCTCCAGACCGGTCAGTGCGTAAGTATTTAATC-CGACT-CCAG-AA---TTCGTCGTGAT-GAGATTTGCTGAC-CTTGGTGGACAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTCTACAACGGCACCTCTGAGCTCCAGCTCGAGCGCATGAACGTCTACTTCAACGAGGTAGGTAGTGGG------CTAGCACACCCA--TTTG-TCAAGAAA----CATTGAACAAACTGACAGACCGCAACCGCACAGGCTTCCGGCAACAAGTATGTCCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_parasiticum_CBS_190.50 GCGTGCCTTTGTTGCTGCCCCTGAGCGTACCCCGCCGCCCCGGTTTCGACCGCTTCGACAACAA--CAAA-GCTGGACGACC-CCAAG--CACGA-TGTGATAT-C-GGAGGACAAGGTTGCTGACTAT-----TTCTTTCT-CAATTCTAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGATCATTC-CAGCTTCCAAAAA-----CT-GCCCTG-GGGATTCACTAACA-TTGGCGATCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTTGACAGCAATGGTGTCTACAACGGTACCTCCGACCTCCAGTTGGAGCGCATGAACGTCTACTTCAACGAGGTATGTGGTTAAAAC---AAAACG--CTCGC-CT-GGTCGAAAAACTTGTGC--A-CAAACTCACAC------GATAC--AGGCTTCCGGCAACAAGTATGTCCCTCGAGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAACTCTTCCGTCCCGACAACTT Cylindrocladium_pauciramosum_STE_U_3207 GCGTGTGTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCGCTTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAT--CATAA-CGAGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTACTC-TTCTCAACT-CCAACAAAA-TTCT-CACGAC-GAGATTCACTGACAGTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACTCGAAGCACTCCC-TT-GACCGAGA-AGCACAA---G-CCAACTCACACCA---TCATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_pauciramosum_STE_U_416 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCGCTTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAT--CATAA-CGAGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTACTC-TTCTCAACT-CCAACAAAA-TTCT-CACGAC-GAGATTCACTGACAGTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACTCGAAGCACTCCC-TT-GACCGAGA-AGCACAA---G-CCAACTCACACCA---TCATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_pauciramosum_STE_U_972 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCGCTTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAT--CATAA-CGAGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTACTC-TTCTCAACT-CCAACAAAA-TTCT-CACGAC-GAGATTCACTGACAGTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACTCGAAGCACTCCC-TT-GACCGAGA-AGCACAA---G-CCAACTCACACCA---TCATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_pseudogracile_AR_2677 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCGCTTCGACAACAA--CAAA-GCCGCTGCCTC-ACGAA--CATGG-CAAGATAT-C-AGA--ACAAGATTGCTAACCGTTT-GCTTCTTTTT-CGATCATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGATC-TTCTCAACT-CCAACAAAA-TTCT-CACGAC-AAGATTCACTGACAGTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGCCTCGACAGCAATGGTGTCTACGCCGGTACCTCCGAACTCCAGCTGGAGCGTATGAACGTCTACTTCAACGAGGTACGTG---AAAACCACACGGAGTACTCCCGTT-G-CCCAGA-AGCACAA---G-CAAACTCACAC-A---TCATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGTCCCGACAACTT Cylindrocladium_pseudonaviculatum_STE_U_3399 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCTGCCGCCCCGACGACAA--CAAACGCTCGGCGACC-GCGAG--CAGGA-TGTGATGTAC-GGG--ACACGATTGCTGACCATTT-GCTTCCTTTT-CAATTATAGGTTCACCTTCAGACCGGTCAGTGCGTAAGTGCTCAATC-CGACT-ACAG-AA---TCCGCCGTGCC-ACAATGCGCTGACACTTCTCAA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGCCTCGACAGCAATGGTGTCTACGCTGGTACCTCTGAGCTCCAGCTCGAGCGCATGAGCGTCTACTTCAACGAGGTATGTAGTATAA--CTCGCGTTGAAAGCAC----G--CAAGAAACCCGAACTGA-CTGACTGACCC-TC--CTCCACC-AGGCTTC-GGCAACAAGTATGTACCCCGTGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTTTTCCGCCCCGACAACTT Cylindrocladium_pseudonaviculatum_STE_U_3570 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCTGCCGCCCCGACGACAA--CAAACGCTCGGCGACC-GCGAG--CAGGA-TGTGATGTAC-GGG--ACACGATTGCTGACCATTT-GCTTCCTTTT-CAATTATAGGTTCACCTTCAGACCGGTCAGTGCGTAAGTGCTCAATC-CGACT-ACAG-AA---TCCGCCGTGCC-ACAATGCGCTGACACTTCTCAA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGCCTCGACAGCAATGGTGTCTACGCTGGTACCTCTGAGCTCCAGCTCGAGCGCATGAGCGTCTACTTCAACGAGGTATGTAGTATAA--CTCGCGTTGAAAGCAC----G--CAAGAAACCCGAACTGA-CTGACTGACCC-TC--CTCCACC-AGGCTTCCGGCAACAAGTATGTACCCCGTGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTTTTCCGCCCCGACAACTT Cylindrocladium_pseudonaviculatum_STE_U_3613 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCTGCCGCCCCGACGACAA--CAAACGCTCGGCGACC-GCGAG--CAGGA-TGTGATGTAC-GGG--ACACGATTGCTGACCATTT-GCTTCCTTTT-CAATTATAGGTTCACCTTCAGACCGGTCAGTGCGTAAGTGCTCAATC-CGACT-ACAG-AA---TCCGCCGTGCC-ACAATGCGCTGACACTTCTCAA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGCCTCGACAGCAATGGTGTCTACGCTGGTACCTCTGAGCTCCAGCTCGAGCGCATGAGCGTCTACTTCAACGAGGTATGTAGTATAA--CTCGCGTTGAAAGCAC----G--CAAGAAACCCGAACTGA-CTGACTGACCC-TC--CTCCACC-AGGCTTCCGGCAACAAGTATGTACCCCGTGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTTTTCCGCCCCGACAACTT Cylindrocladium_quinqueseptatum_STE_U_516 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGACCCGGTTTCCACCGCTTCGACGACAA--CAAA-GCCGCAACATC-ATGAA--CAAGA-CGAGATAT-C-GGA--ACAAGATTGCTAACCATGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-CTCTCGA-TTCCAAATATG-TTCT-CATGAC-AAGATTCACTGACAGTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTTTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGCG--AAAAACCATGCC-TGCGCTCGC-TTTG-TCGAAAAAGCACAA---G-CAAACTGACAC-AC---CATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_scoparium_ATCC_38227 GGGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACATCGACGAAAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAACT-CCAACAAAA-TTCT-CACGAC-CGGATTCACTGACAGTTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGTGTACTCAC-AC-G-CCGAGA-GGCACAA---G-CAAACTGACAC------CATGT--AGGCTTCTGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_scoparium_ATCC_46300 GCGTGCCTTGGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACATCGACGAAAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAACT-CCAACAAAA-TTCT-CACGAC-CGGATTCACTGACAGTTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCCACGAGGTATGTG---AAAACCACGCGGTGTTCTCAC-AC-G-CCGAGA-GGCACAA---G-CAAACTGACACCA------TGT--AGGCTTCTGGCAACAAGTTCCGTCCTTGTGCTGTCGTCGTCGATCTTGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_scoparium_STE_U_1720 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACATCGACGAAAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAACT-CCAACAAAA-TTCT-CACGAC-CGGATTCACTGACAGTTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGTGTACTCAC-AC-G-CCGAGA-GGCACAA---G-CAAACTGACAC------CATGT--AGGCTTCTGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_scoparium_STE_U_1722 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCACATCGACGAAAA--CAAA-GCCGCAGCCTC-ACGAA--CATGA-TGTGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-TT--CAACT-CCAACAAAA-TTCT-CACGAC-CGGATTCACTGACAGTTATCGA-CAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGTGTCTACGCTGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACGCGGTGTACTCAC-AC-G-CCGAGA-GGCACAA---G-CAAACTGACAC------CATGT--AGGCTTCTGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Cylindrocladium_spathulatum_ATCC_62616 GCGTGCCTTTGTTGCTGCCCCTGATTCTACCCCGCCGCCCCGGTTTCCACCGCTTCGACGACAA--CAAA-GCCGCAGCCTC-ACGAT--CATGA-CGAGATAT-C-AGA--ACAAGATTGCTAACCGTGT-GCTTCTTTCT-CGATTATAGGTCCACCTCCAGACCGGTCAGTGCGTAAGTACTT-TTCTCAACT-CCAACAAAA-TTCT-CACGAC-GAGATTCACTGACAGTTGTCGAT-AGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATTTCTGGCGAGCACGGCCTCGACAGCAATGGCGTCTACGCCGGTACCTCCGAGCTCCAGCTCGAGCGTATGAACGTCTACTTCAACGAGGTATGTG---AAAACCACTCGAAGCACTCCC-TT-GGCCGAGA-AGCACAA---G-CCAACTCACAC-AC--TCATGT--AGGCTTCCGGCAACAAGTTCGTTCCTCGCGCTGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGTCAGCTCTTCCGCCCCGACAACTT Fusarium_subglutinans_NRRL_22016 GCGTTGAGTTTATGGTGCCCCTGATTCTACCCCGCTGGGC-GGTGG-CA--GCTC-AACGACAATGCACG-ATAGCTAGCA--GCTTTAA-ATAC-CTTC-TGT-CAAGA--TGAAGAA-GCTAATCAGAT--CTTTTCTCTGCGAT---AGGTTCACCTCCAGACCGGTCAGTGCGTAAGTGCTC-ATCGCTTCC-TCGAC--GTCGCAT--GTGGG-G-GA--TGCTCAC-GATGTTTATCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAAACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTCTACAACGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTATGCT---TTAA-CAGTCAATGCCAA-GAATT---CC---------CAA---G-----CTCACAC------AAC-T--AGGCCTCTGGCAACAAGTATGTTCCCCGAGCCGTCCTCGTCGATCTTGAGCCTGGTACCATGGACGCCGTCCGAGCTGGTCCCTTCGGTCAGCTCTTCCGTCCCGACAACTT ; END; [ The following blocks are output data for analysis step 1511 ] BEGIN TREES; TITLE Tb6287; LINK TAXA = TaxaForAnalysisStep1511; TREE Fig._8 = [&R] (Fusarium_subglutinans_NRRL_22016,(((((((Cylindrocladium_candelabrum_STE_U_1674,(Cylindrocladium_pauciramosum_STE_U_972,Cylindrocladium_pauciramosum_STE_U_3207,Cylindrocladium_pauciramosum_STE_U_416)Cylindrocladium_pauciramosum),Cylindrocladium_spathulatum_ATCC_62616),(Cylindrocladium_pseudogracile_AR_2677,(Cylindrocladium_mexicanum_STE_U_927,Cylindrocladium_graciloideum_STE_U_1153))),(Cylindrocladium_flexuosum_STE_U_2536,(Cylindrocladium_gracile_PC_551197,Cylindrocladium_gracile_STE_U_1586,Cylindrocladium_gracile_STE_U_623)Cylindrocladium_gracile)),(Cylindrocladium_gordoniae_STE_U_3136A,Cylindrocladium_quinqueseptatum_STE_U_516)),((((Cylindrocladium_insulare_STE_U_768,Cylindrocladium_insulare_STE_U_954)Cylindrocladium_insulare,(Cylindrocladium_scoparium_ATCC_46300,Cylindrocladium_scoparium_ATCC_38227,Cylindrocladium_scoparium_STE_U_1720,Cylindrocladium_scoparium_STE_U_1722)Cylindrocladium_scoparium,Cylindrocladium_insulare_STE_U_616,Cylindrocladium_insulare_STE_U_3199,Cylindrocladium_insulare_STE_U_3219),Cylindrocladium_hawksworthii_MUCL_30866),Cylindrocladium_insulare_STE_U_3211)),((Cylindrocladium_floridanum_ATCC_18882,Cylindrocladium_parasiticum_CBS_190.50),((Cylindrocladium_pseudonaviculatum_STE_U_3570,Cylindrocladium_pseudonaviculatum_STE_U_3613,Cylindrocladium_pseudonaviculatum_STE_U_3399)Cylindrocladium_pseudonaviculatum,(Cylindrocladium_naviculatum_STE_U_628,Cylindrocladium_naviculatum_STE_U_627)Cylindrocladium_naviculatum)))Cylindrocladium); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4047] END;