#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 20, 2025; 13:49 GMT TreeBASE (cc) 1994-2008 Study reference: Guatimosim E., Firmino A.L., Bezerra J.L., Pereira O.L., Barreto R., & Crous P.W. 2015. Steps towards a phylogenetic reappraisal of Parmulariaceae and Asterinaceae (Dothideomycetes). Persoonia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S17355] [ The following blocks are input data for analysis step 15847 ] BEGIN TAXA; TITLE TaxaForAnalysisStep15847; DIMENSIONS NTAX=32; TAXLABELS Apiosporina_collinsii_CBS_118973 Apiosporina_morbosa_Dimosp Asterina_cestricola_TH_591 'Asterina chrysophylli VIC_42823' Asterina_fuchsiae_TH_590 'Asterina melastomatis VIC_42822' Asterina_phenacis_TH_589 'Asterina siphocampyli PpMP_1324' Asterina_sp_MFLU13_0619 Asterina_sp_MFU13_0485 Asterina_weinmanniae_TH_592 Asterina_zanthoxyli_TH_561 Asterotexis_cucurbitacearum_PMA_M_0141224 'Asterotexis cucurbitacearum VIC_24814' Aulographum_hederae_CPC_21373 Aulographum_hederae_MFLUCC_13_0001 'Batistinula gallesiae VIC_42514' Gibbera_conferta_CBS_191_53 'Inocyclus angularis VIC_39747' 'Inocyclus angularis VIC_39748' 'Inocyclus angularis VIC_39749' 'Lembosia abaxialis VIC_42825' Lembosia_albersii_MFLU13_0377 'Parmularia styracis VIC_42447' 'Parmularia styracis VIC_42450' 'Parmularia styracis VIC_42587' Phaeotrichum_benjaminii_CBS_541_72 'Prillieuxina baccharidincola VIC_42817' Saccharomyces_cerevisiae_DAOM_216365 Trichodelitschia_bisporula_CBS_262_69v2 Venturia_inaequalis_CBS_176_42 Venturia_populina_CBS_256_38_ ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M30655] TITLE Parmulariaceae_and_Asterinaceae_Supplementary; LINK TAXA = TaxaForAnalysisStep15847; DIMENSIONS NCHAR=539; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Apiosporina_collinsii_CBS_118973 ??????AGT-ACGGCGAGTGAAGCGGC-ACAGCTCAAATTTGAAATCTC----------CGCCCGAGTTGTAATTTGTAGA-GGAT-GCTTC-GGGTGAAGCCGCGGTCCAAGTCCCTTGGAACAGGACGTCAGAGAGGGTGAGAACCCCGTACCTGGCCGCCGG-TGCCCCCCGCTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATTGGTGGTAAATTCCATCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCGGCCAGACTTGCCCGCGGTTGCTCAGCCCGCCT-TT--T-GGCGG--GTGCACTCT--TCCGCGGTCAGGCCAGCATCGGTTCGGGCGGCCGGAGAAAGGCGTCGGGAACGTGGCC--------------------------TCCCCAATGCGGCCAGCCCGGACCGAGGTTCGCGCTCT? Apiosporina_morbosa_Dimosp ????????TAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTA----------CGCCCGAGTTGTAATTTGTAGA-GGAT-GCTTC-GGGTGAAGCCGCGGCCCAAGTCCCTTGGAACAGGACGTCGTAGAGGGTGAGAGCCCCGTACCTGGCCGCCGG-TGCCCCCCGCTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATTGGTGGTAAATTCCATCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCGGCCAGACTTGCCCGCGGTTGCTCAGCCCGCCC-TC--T-GGCGG--GTGCACTCT--TCCGCGGTCAGGCCAGCATCGGTTCGGGCGGCCGGATAAAGGCTCCGGGAACGTAGCC--------------------------TCCCTAATGCGGCCAGCCCGGACCGAGGTTCGCGCTCT? Asterina_cestricola_TH_591 TGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCCCCC---GGGCCCGAGTTGTAATTTGCAGA-GGAT-GCTTC-GGGGCGGGCCCCGTCCCGAGTCCCTTGGAACAGGGCGCCGCAGAGGGTGAGGGCCCCGTACACGGCCGGACG--CCCGCCCCGTGCGAAGCTCCTTCGACGAGTCGAGCTGTTTGGGAATGCAGCTCCAAACGGGAGGTATATTCCTCCCAAGGCTAAATACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGGTGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTTGCGGCCAGACCTGGTGGCGGTTGCTCAGCCGGTCCCTC--GGGGCCG--GCGCACTCT--TCCGCCACCTGGCCAGCATCGGTCCGGGCGGCCGGACAAAGGCCGGGGGAACGTGGCCCCCGC--GCGGGGTGTTATAGCCCCCGGCACAATACGGCCAGCCCGGACCGAGGACAGCGT?-?? 'Asterina chrysophylli VIC_42823' ????????????G?CGAGTGAAGCGGCAACAGCTCAAATTTGAAATCCGGCGCCCCCGGCGTCCGAGTTGTGATTTGCAGA-GGGT-GGCTCGGGC-CCGTCCCCCGTCCAAGTCCCCTGGAACGGGGCGTCGCGGAGGGTGAGAACCCCGTATGCGACGGGGAG--ACGTGCCCGTACGAGCCCCCTCCGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAGTGGGAGGTAAATTCCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACGACCAGACTCGGGTGCGGGTGCTCAACCTCTCC-----------G--GTGCA-TCG--CCCGCGCCCGGGCCAGCATCGATTCGGGCGGTCGGATAAAGGCCCCGGGAACGTGGCTCCCCTC-GGGGAGTGTTATAGCCCGGGGCGTAATGCGACCCGCCCCGGATCGAGGACCGCGTTCG Asterina_fuchsiae_TH_590 TGCCTCAGTAACCGCGAGTGAAGCGGCAACAGCTCAAA-TTGAAATCTGGCCCC----GGGCCCGAGTTGTAATTTGCAGA-GGAT-GCTTC-GGGGCGGCCCCCGGTCCAAGTCCCTTG-AACAGG-CGTC-TAGAGGGAGAGGACCC-GTACACGACCGG-CG--TCCGCCCCGTGCGAA-CTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAACGGGAGGTATATTCCTCCCAA-GCTAAATACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA-CACTTTGGAAA-A-AGTGAAAAAGTACGTGAAATTATTGAAAGGGAAGCGTCTGCGGCCAGACCTGGTGGCGGTTGCTCAGCCGGTCCTTC--GGGGCCG--GCGCACTCT--TCCGCCACCTGGCCAGCATCGGTTTGGGCGGCCGGACAAAG{GT}CCTCGGGAACGTGGCCCCCTC--GCGGGGTGTTATAGCCCTTGGCACAATGCG?????????????????????????-?? 'Asterina melastomatis VIC_42822' TGCCCTAGTAACGGCGAGTGAAGCGGCAGCAGCTCAAATTTGAAATCCGGCGCCCCCGGCGCCCGAGTTGTAATTTGTAGA-GGGT-GGCTCGGGC-CCGT-CCCCGTCCAAGTCCCCTGGAACGGGGCGTCGTGGAGGGTGAGAATCCCGTACGCGGCGGGGCG--ACGTGCCCGTGTGAGCCCCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTCCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTCAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACGATCAGACTCGGGCGCGGGTGCTCAACCCAACC----------GG--GTGCA-TCG--CCCGCGCCCGGGCCAGCATCGGCTCGGGCGGCCGGATGAAGGCCCCGGGAACGTGGCTCCTCTC-GGGGAGTGTTATAGCCCGGGGCGCAACGCGGCCCGCCCGGACCGAGGACCGCGTT-CG Asterina_phenacis_TH_589 TGCCTCAGTAACGGCGAGTGAAGCGGCAGCAGCTCAAATTTGAAATCTGGCCCCCC---GGCCCGAGTTGTAATTTGCAGA-GGAT-GCTTC-GGGGCGGGCCCCGGCCCGAGTCCCTTGGAACAGGGCGCCGTAGAGGGTGAGGGCCCCGTACACGGCCGGACG--TCCGCCCCGTGCGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAACGGGAGGTATATTCCTCCCAAGGCTAAATACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTTGCGGCCAGACCTGGTGGCGGTTGCTCAGCCGGTCCTTC--TGGGCCG--GCGCACTCT--TCCGCCACCTGGCCAGCATCGGTTCGGGCGGCCGGATAAAGGTTGGGGGAACGTGGCCCCCTC--GCGGGGTGTTATAGCCCCCTTCACAATGCGGCCCGCCCGGACCGAGGACAGCGTT-CG 'Asterina siphocampyli PpMP_1324' TGCCTCAGTAACGGCGAGTGAAGCGGCAGCAGCTCAAATTTGAAATCTGGCCCCC----GGCCCGAGTTGTAATTTGCAGA-GGAT-GCTTC-GGGGCGGGCCCCGGCCCGAGTCCCTTGGAACAGGGCGCCGTAGAGGGTGAGGGCCCCGTACACGGCCGGACG--CCCGCCCCGTGCGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAACGGGAGGTATATTCCTCCCAAGGCTAAATACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTCAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTTGCGGCCAGACCTGGTGGCGGTGGCTCAGCCGGCCCCTC--TGGGCCG--GCGCACTCC--TCCGCCACCCGGCCAGCATCGGTTCGGGCGGCCGGATAAAGGCCGGGGGAACGTGGCCCCCTC--GCGGGGTGTTATAGCCCCCGGCACAATGCGGCCCGCCCGGACCGAGGACAGCGGT-CG Asterina_sp_MFLU13_0619 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCTTTTGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAACGGGAGGTATATTCCTCCCAAGGCTAAATACCGGCCGGAGACCCATAGCGCACAAGTAGAGTGATAGAAAGATGAAAAGCACTTTGGAAAAAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTAGGCGGCCAGACCCGGTGGCGGTTGCTCAGCCGGTCCCCCCGGGGGCCG--GCGCATTCT--TCCGCCACCTGGCCAGCATCGGTTGGGGTGCCCGGACAAAGGCCCTGGGAACGTGGCCCCCCTCGCGGGGGTGTTATAGCCCGGGGCATAACGCGGCCCGCCCGGACCGAGGACAGCGTTC-G Asterina_sp_MFU13_0485 ----------------------------------------------------------------GAGTTGTAATTTGGAGA-GGAT-GCCTC-GGGGTCGTCTCCGGCCTAAGTTCCTTGGAACAGGACGTCGTAGAGGGTGAGAATCCCGTACGCGGCCGGGTG--CCTTCCCCGTGTGAGGCTCCTGCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTATATTTCTCCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTTGCGGCCAGACTTGATGGCGGTTGCTCAGCCGGTCTCT-----GCCCG--GTGCACTCT--TCCGTCGTCAGGCCAGCATCAGTTTGGGCGGCCGGATAAAGGCTTTGGGAACGTGGCTCCTC-----GGAGTGTTATAGCCCTTTGCACAATACGGCCCGCCCGGACTGAGGACAGCGTTC-G Asterina_weinmanniae_TH_592 ???????????CGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCCCC----GGGCCCGAGTTGTAATTTGCAGA-GGAA-GCTTC-GGGGTGGCCCCCGGTCCAAGTCCCTTGGAACAGGGCGTCGTAGAGGGTGAGGATCCCGTACACGGCCGGACG--TCCGCCCCGTGCGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAACGGGAGGTATATTCCTCCCAAGGCTAAATATTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGTCTGCGGCCAGACCTGGCGACGGCGGCTCAGCCGGCCCCTC--GGGACCG--GCGCACTCC--GCCGTCGCCTGGCCAGCATCGGTTCGGGCGGCTGGACAAAGGCCCGGGGAACGTGGCCCCTTC--GGGAGGTGTTATAGCCCCGGGCACAATGCAGCCCGCCCGGACCGAGGACAGCGTT-CG Asterina_zanthoxyli_TH_561 TGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAGATTTGAAATCCGGCCCCCA---GGCCCGAGTTGTAATCTGCAGA-GGAT-GCTTC-GGGGCGGCCCCCGGTCCAAGCCCCTTGGAACAGGGCGTCGTAGAGGGTGAGGATCCCGTCCACGGCCGGGCG-GACCGCCCCGTGCGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAACGGGAGGCATATTCCTCCCAAGGCTAAATACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTCGAAAGGGAAGCGTCTGCGGCCAGACCTGGTGGCGGTTGCTCAGCCGGCCCTTC--GGGGCCG--GCGCACTCT--CCCGCCACCTGGCCAGCATCGGTCCGGGCGGCCGGACAAAGGCCCCGGGAACGTGGCCCCCTC--GCGGGGTGTTATA?CCCGGGGCACAATGCGGCCCGCCCGGACCGAGGACAGCGTC-CG Asterotexis_cucurbitacearum_PMA_M_0141224 TGCCCCAGTAACGGCGAGTGAAGCGGCAGCAGCCCAAATTTGAAATCTGGCCCC----GGACCCGAGTTGTAATTTGAAGA-GGAT-GCTTC-GGTCGCGCACCCGGCCCAAGTCCCTTGGGACAGGGTGCCGCAGAGGGTGAGAGTCCCGTACGCGGCCGGGTG--CCGCGCCCATGCGAAGCTCCCTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAGCGGGAGGTATATTCCTTCCAAGGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAGGATGAAAAGCACTTTGGAAAGAGAGTGAAACAGTACGTGAAATTGTTGAAGGGGAAGCGTTTGCGGCCAGACCCGGCGGCGGTGGCTCAGCCGGTCA-GT----GCCCG--GTGCACTCC--TCCGCCGCCAGGCCAGCATCAGCTCGGGCGGCCGGACAAAGGCGACGGGAACGTGGCCCCTCTC-GGGGGGTGTTACAGCCCGTCGCACAATACGGCCAGCCTGGGCTGAGGACAGCGTT-CG 'Asterotexis cucurbitacearum VIC_24814' TGCCCTAGTAACGGCGAGTGAAGCGGCAGCAGCCCAAATTTGAAATCTGGCCCCC---GG-CCCGAATTGTAATTTGGAGA-GGAT-GCTTCGGTC-GCGCACCCGGCCCAAGTCCCTTGGGACAGGGTGCCGCAGAGGGTGAGAGTCCCGTACGCGGCCGGGTG--CCGCGCCCATGCGAAGCTCCCTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGCGGGAGGTATATTCCTTCCAAGGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAGGATGAAAAGCACTTTGGAAAGAGAGTGAAACAGTATGTGAAATTGTTGAAGGGGAAGCGTTTGCGGCCAGACCTGGCGGCGGTGGCTCAGCCGGTCG-CT----GACCG--GTGCACTCC--TCTGCCGCCAGGCCAGCATCAGCTCGGGCGGCCGGACAAAGGCGATGGGAACGTGGCCCCTCCC-GGGGGGTGTTACAGCCCGTCGCACAATACGGCCAGCCTGGGCTGAGGACAGCGTT-CG Aulographum_hederae_CPC_21373 TGCCTCAGTAACGGCGAGTGAAGCGGCAATAGCTCAATTTTGAAATCTAGCACCTCTGGTGTTCGAGTTGTAATTTGTAGA-AGAT-GTTCC-CGAGTTTACCTTGGTCTATGTTCCTTGGAACAGGTCGTCATAGAGGGTGAGAATCCCGTATGTGGCCGAGTG--TACTCTCGATGTGGGACT-CTTCGTCGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTAGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTCCGGAAGGGGGGTCAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGATTGCATCTGGG----------------------GACTT--GTGAACCTT--------TTGCTGGCAGTTTTGTTTTCGGTAGCCAGTT-AACATGCCATCAATGTAGCTCCCTC---GGGAGTGTTATAG--GGTGGTCTAATGTGGCTTATTGTGAGCGAAACTGCCGTAATG Aulographum_hederae_MFLUCC_13_0001 TGCCTCAGTAACGGCGAGTGAAGCGGCAATAGCTCAATTTTGAAATCTAGCACCTCTGGTGTTCGAGTTGTAATTTGTAGA-AGAT-GTTCC-CGAGTTTACCTTGGTCTATGTTCCTTGGAACAGGTCGTCATAGAGGGTGAGAATCCCGTATGTGGCTGAGTG--TACTCTCGATGTGGGACT-CTTCGTCGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTAGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTCCGGAAGGGGGGTCAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGATTGCATCTGGG----------------------GACTT--GTGAACCTT--------TTGCTGGCAGTTTTGTTTTCGGTAGCCAGTT-AACATGCCATCAATGTAGCTCCCTC---GGGAGTGTTATAG--GGTGGTCTAATGTGGCTTATCGTGAGCGAAACTGCCGTAATG 'Batistinula gallesiae VIC_42514' TGCCCCAGTAACGGCGAGTGAAGCGGCAGCAGCTCAAATTTGGAATCTGGCGCCCCCGGCGCCCGAGTTGTAATTTGCAGA-GGGC-GGCCCGGGT-CTGCACCCCGTCCAAGTCCCCTGGAACGGGGCGTCGTAGAGGGTGAGAATCCCGTACGCGGCGGGGCG--GCGGGCCCGCGTGGGCCCCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAATTGGGAGGTAAATTCCTTCTAAAGCTAAGTACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTCAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACGATCAGACTCGGGCGCGACCGCTCAGCCGGTCCATC--A-GACCG--GTGCA-TCG--GCCGCGCCCGGGCCAGCACCGGCTCGGGCGGTCGGATAAAGGCTCCGGGAACGTAGCTCCCCAC-GGGGAGTGTTACAGCCCGGGGCGCAATGCGACCCGCCCGGGCCGAGGACCGCGCT-CG Gibbera_conferta_CBS_191_53 ??????????????????????GCGGCAACAGCTCAAATTTGAAATCTA----------CGCCCGAGTTGTAATTTGTAGA-GGAT-GTTTC-GGGTGAAGCCACGGTCCAAGTCCCTTGGAACAGGACGTCATAGAGGGTGAGAACCCCGTACCTGGCCGTCGG-TGCCCCCCGCTGTGAAACTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATTGGTGGTAAATTCCATCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCGGCCAGACTTGCCCGCGGTTGCTCATCCCGCCT-TT--T-GGCGG--GTGCACTCT--TCCGCGGTCAGGCCAGCATCGGTTTGGGCGGTCGGATAAAGGCGCTGGGAACGTGGCC--------------------------TCCCCAATGCGGCCAGCCCGGACCGAGGTTCGCGCTTTG 'Inocyclus angularis VIC_39747' TGCCTCAGTAACGGCGAGTGAAGCGGCAGCAGCTCAAATTTGAAATCTGGCA-----CCCGCCCGAGTTGTAATTTGGAGA-GGAC-GCCTTGGGGGCCGGCCCCGGTCCAAGTCCCTTGGAACAGGACGCCGCGGAGGGTGAGAGTCCCGTATGCGGCCGGGTG--CCGTCCCCGCGCAAGGCTCCTTCGACGAGTCGAGCTGTTTGGGAATGCAGCTCCAAACGGGAGGTATATTCCTTCTAAGGCTAAATACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAGAGTACGTGAAATTGCTGAAAGGGAAGCGTTTGCGGCCAGACTTGACCGCGGTTGCTCAGCCGGTCCACT----GCCCG--GCGCACTCT--TCCGCGGTCAGGCCAGCATCAGTTCGGGCGGCCGGAGGAAGGCTCCGGGAACGTAGCCCCCC-----GGGGTGTTATAGCCCGCTGCACAACACGGCCCGCCCGGACTGAGGACAGCGCC-TG 'Inocyclus angularis VIC_39748' TGCCTCAGTAACGGCGAGTGAAGCGGCAGCAGCTCAAATTTGAAATCTGGCA-----CCCGCCCGAGTTGTAATTTGGAGA-GGAC-GCCTTGGGGGCCGGCCCCGGTCCAAGTCCCTTGGAACAGGACGCCGCGGAGGGTGAGAGTCCCGTATGCGGCCGGGTG--CCGTCCCCGCGCAAGGCTCCTTCGACGAGTCGAGCTGTTTGGGAATGCAGCTCCAAACGGGAGGTATATTCCTTCTAAGGCTAAATACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAGAGTACGTGAAATTGCTGAAAGGGAAGCGTTTGCGGCCAGACTTGACCGCGGTTGCTCAGCCGGTCCACT----GCCCG--GCGCACTCT--TCCGCGGTCAGGCCAGCATCAGTTCGGGCGGCCGGAGGAAGGCTCCGGGAACGTAGCCCCCC-----GGGGTGTTATAGCCCGCTGCACAACACGGCCCGCCCGGACTGAGGACAGCGCC-TG 'Inocyclus angularis VIC_39749' TGCCTCAGTAACGGCGAGTGAAGCGGCAGCAGCTCAAATTTGAAATCTGGCA-----CCCGCCCGAGTTGTAATTTGGAGA-GGAC-GCCTTGGGGGCCGGCCCCGGTCCAAGTCCCTTGGAACAGGACGCCGCGGAGGGTGAGAGTCCCGTATGCGGCCGGGTG--CCGTCCCCGCGCAAGGCTCCTTCGACGAGTCGAGCTGTTTGGGAATGCAGCTCCAAACGGGAGGTATATTCCTTCTAAGGCTAAATACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAGAGTACGTGAAATTGCTGAAAGGGAAGCGTTTGCGGCCAGACTTGACCGCGGTTGCTCAGCCGGTCCACT----GCCCG--GCGCACTCT--TCCGCGGTCAGGCCAGCATCAGTTCGGGCGGCCGGAGGAAGGCTCCGGGAACGTAGCCCCCC-----GGGGTGTTATAGCCCGCTGCACAACACGGCCCGCCCGGACTGAGGACAGCGCC-TG 'Lembosia abaxialis VIC_42825' TGCCCTAGTAACGGCGAGTGAAGCGGCAGCAGCTCAAATTTGAAATCCGGCGCCCCCGGCGCCCGAGTTGTAATTTGTAGA-GGGT-GGCTCGGGC-CCGT-CCCCGTCCAAGTCCCCTGGAACGGGGCGTCGTGGAGGGTGAGAATCCCGTACGCGGCGGGGCG--ACGTGCCCGTGTGAGCCCCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTCCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTCAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACGATCAGACTCGGGCGCGGGTGCTCAGCCCCACC----------GG--GTGCA-TCG--CCCGCGCCCGGGCCAGCATCGGTTCGGGCGGCCGGATGAAGGCCCCGGGAACGTGGCTCCTCTC-GGGGAGTGTTATAGCCCGGGGCGCAACGCGGCCCGCCCGGACCGAGGACCGCGTT-CG Lembosia_albersii_MFLU13_0377 ----------------------------------------------------------------------------------------------------------GCACAGGTTCCCTTGAACGGGACGCCGCAGAGGGTGAGAGCGCCATCCGCGTCCGGGCG--CATTCGCCGCGAGAGGCTCCTTCGACGAGTGGAGTTATTTGTGAGTGCAGCTCCAAGCGGGAGGTATATTCCTTTTAAAGCTAAACACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATTGAAAGATGAAAAGCACTCTGGAAAGAGAGTGAAACAGTACGTGAAATAGTTGAAAGGGAAGCGTTTGCCGCCAGACTGGACGGCGCCCGCTCGGCCGGCCCTCC--GGGGCCG--GCGCACTCG--GGCGTCGCCGGGCCAGGGTCGGTTTGGGCGGCCGGACAAAGGCGCGGGGAACGTGGCTCCCT---CGGGAGTGTTACAGCCCCGCGCGCAACGCGGCCAGCCCGGACCGAGGACCGCGTTCTG 'Parmularia styracis VIC_42447' TGCCTTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCGGGCGC-----AAGTCTGAATTGTAGTTTGTAGGTGGAT-GGTTCGAGT-GCGTTCCCGTCGAAAGTCCCCTGGAACAGGGCGTCGCAGAGGGTGAGAATCCCGTTCGCGACGGGGCG--ATGTGCTCGTGTGAGCCTCCATTGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAAGGGGAGGTAAATTCCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGAACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACGACCAGACTCGGGTATGGTTGCTCAGGCCATCT-AT--T-GGTGG--TTGTA-TCG--GCCGTACCCGGGCCAGCATCGGTTCTGGCGGCGGGAGAAAAGCGGCGGGAACGTGGCTCCCTT---GGGAGTGTTATAGCCCGCCGTGCAATGCCGCCAGTCGGGACCGAGGACCGCGTT-CG 'Parmularia styracis VIC_42450' TGCCTTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCGGGCGC-----AAGTCTGAATTGTAGTTTGTAGGTGGAT-GGTTCGAGT-GCGTTCCCGTCGAAAGTCCCCTGGAACAGGGCGTCGCAGAGGGTGAGAATCCCGTTCGCGACGGGGCG--ATGTGCTCGTGTGAGCCTCCATTGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAAGGGGAGGTAAATTCCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGAACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACGACCAGACTCGGGTATGGTTGCTCAGGCCATCT-AT--T-GGTGG--TTGTA-TCG--GCCGTACCCGGGCCAGCATCGGTTCTGGCGGCGGGAGAAAAGCGGCGGGAACGTGGCTCCCTT---GGGAGTGTTATAGCCCGCCGTGCAATGCCGCCAGTCGGGACCGAGGACCGCGTT-CG 'Parmularia styracis VIC_42587' TGCCTTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCGGGCGC-----AAGTCTGAATTGTAGTTTGTAGGTGGAT-GGTTCGAGT-GCGTTCCCGTCGAAAGTCCCCTGGAACAGGGCGTCGCAGAGGGTGAGAATCCCGTTCGCGACGGGGCG--ATGTGCTCGTGTGAGCCTCCATTGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAAGGGGAGGTAAATTCCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGAACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACGACCAGACTCGGGTATGGTTGCTCAGGCCATCT-AT--T-GGTGG--TTGTA-TCG--GCCGTACCCGGGCCAGCATCGGTTCTGGCGGCGGGAGAAAAGCGGCGGGAACGTGGCTCCCTT---GGGAGTGTTATAGCCCGCCGTGCAATGCCGCCAGTCGGGACCGAGGACCGCGTT-CG Phaeotrichum_benjaminii_CBS_541_72 TGCCTTAGTA-CGG-GAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGG---------CGTCCGAGTTGTAATTTGTAGA-GGAT-GCTTC-AGGCGCGGCGCCGACCGAAGTTCTTTGGAACAGGACGTCAGAGAGGGTGAGAACCCCGTATGCGTTCGGCGCGCAGTTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTAAATTCCATCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTCGTCCGCGGGGGTATCGTTCGCCG-TC--A-GGCGGGCGTATACGCC--TCCGCGGCCGGGCCAGCATCGGTTTGGGCGACCGGATAAAGGCCCTAGGAATGTGACC--------------------------CTCCTAATGCGGCCAGCCTGGACCGAGGTCCGCGCTTCG 'Prillieuxina baccharidincola VIC_42817' TGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCCGGCGCCCTCGGCGCCCGAGTTGTAATTTGTAGA-GGGT-GGCCCGGGT-CCGT-CCCCGTCTAAGTCCCCTGGAACGGGGCGTCGTAGAGGGTGAGAATCCCGTATGCGACGGGGCG--ACGTACCCGTGTGGGCCCCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTCCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACGACCAGACTCGGGTGCGGGTGCTCAACCACTCC-----------G--GTGCA-TCG--CCTGTGCCCGGGCCAGCATCGGTTCGGGCGGTCGGATAAAGGCTCCGGGAACGTAGCTCCCCTC-GGGGAGTGTTATAGCCCGGGGCGCAATGCGGCCCGCCCGGACCGAGGACCGCGTT-CG Saccharomyces_cerevisiae_DAOM_216365 TGCCTTAGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGTACCTTCGGTGCCCGAGTTGTAATTTGGAGA-GGGCAACTTT-GGGGCCGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTGTGGCGAGGAGTG---CGGTTCTTTGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCTCTGCTCCT-TG--T-GGGTA--GGGGAATCTCGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCA-TAGGAATGTAGCTTGCCTC---GGTAAGTATTATAGCCTGTGGGAATACTGCCAGCTGGGACTGAGGACTGCGACGTA Trichodelitschia_bisporula_CBS_262_69v2 ??CCTTAGTAACGGCGAGTGAAGCGGCAATAGCTCAAATTTGAAATCGGG---------CGTCCGAGTTGTAATTTGTAGA-GGAT-GCTTC-AGACACGGCGTCGGCCGAAGTTCTTTGGAACAGGACGTCATAGAGGGTGAGAACCCCGTATGTGTTCGACGTGCAGTTGTCTATGTGAAGCTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTCCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCGATCAGACTCGTCCGTAGAGGTAGCGTTCGCCG-TC--A-GGCGGGCGTATACGCC--TCTACGGCCGGGCCAGCATCGGTTTGGGCGACCGGATAAAGGCCCTAGGAATGTGGCC--------------------------CTCTTAATGCGGCCAGCCCGGACCGAGGTCCGCGCTTCG Venturia_inaequalis_CBS_176_42 ???CTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTA----------AGCCCGAGTTGTAATTTGCAGA-GGAT-GTTTC-GGGTGAAGCCACGGTCCAAGTCCCTTGGAACAGGACGTCATAGAGGGTGAGAACCCCGTACCTGGCCGTCGG-TGCCCCCCGCTGTGAAACTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATTGGTGGTAAATTCCATCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCGGCCAGACTTGCCCGCGGTTGCTCAGCCCGCCT-TT--T-GGCGG--GTGCACTCT--TCCGCGGTCAGGCCAGCATCGGTTTGGGCGGTCGGATAAAGGCGTCGGGAACGTGGCC--------------------------TCCCCAATGCGGCCAGCCCGGACCGAGGTTCGCGCTTT? Venturia_populina_CBS_256_38_ ?????????AACGGCGAGTGAAGCGGCAACAGCTCAGATTTGAAATCTA----------AGCCCGAGTTGTAATTTGCAGA-GGAT-GTTTC-GGGTGAAGCCACGGTCCAAGTCCCTTGGAACAGGACGTCATAGAGGGTGAGAACCCCGTACCTGGCCGTCGG-TGCCCCCCGCTGTGAAACTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATTGGTGGTAAATTCCATCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCGGCCAGACTTGCCCGCGGTTGCTCAGCCCGCCT-TT--T-GGCGG--GTGCACTCT--TCCGCGGTCAGGCCAGCATCGGTTTGGGCGGTCGGATAAAGGCGTCGGGAACGTGGCC--------------------------TCCCCAATGCGACCAGCCCGGACCGAGGTTCGCGCTTT? ; END; [ The following blocks are output data for analysis step 15847 ] BEGIN TREES; TITLE Parmulariaceae_and_Asterinaceae_Supplementary; LINK TAXA = TaxaForAnalysisStep15847; TREE supp_tree = [&R] (Saccharomyces_cerevisiae_DAOM_216365:0.4822926381456511,(((('Asterina melastomatis VIC_42822':0.007107421658280502,'Lembosia abaxialis VIC_42825':0.002883355031836431):0.02411800180546936,('Prillieuxina baccharidincola VIC_42817':0.01615331271278384,'Batistinula gallesiae VIC_42514':0.09131222097432799):0.01634174307871383,'Asterina chrysophylli VIC_42823':0.08223412982401196):0.03396901186720854,('Parmularia styracis VIC_42447':0.001454067753478064,'Parmularia styracis VIC_42450':0.001436357458536059,'Parmularia styracis VIC_42587':0.001517145322906554):0.1623430984567711):0.07580693798463838,(((('Asterotexis cucurbitacearum VIC_24814':0.02613301663150842,Asterotexis_cucurbitacearum_PMA_M_0141224:0.009707728687311934):0.1112341865579096,((Asterina_cestricola_TH_591:0.02142026991422994,(Asterina_phenacis_TH_589:0.01331467872006209,'Asterina siphocampyli PpMP_1324':0.01615891379992717):0.007568988189300868):0.02020655993848674,Asterina_weinmanniae_TH_592:0.05302251113701061,Asterina_zanthoxyli_TH_561:0.03470168337882598,Asterina_fuchsiae_TH_590:0.02328067566621239,Asterina_sp_MFLU13_0619:0.07944832986162126):0.05596162328262621):0.0284266021998037,('Inocyclus angularis VIC_39747':0.001458664877732456,'Inocyclus angularis VIC_39748':0.001504515557040742,'Inocyclus angularis VIC_39749':0.001475825842651778):0.08400400639387147):0.02464875666045542,Asterina_sp_MFU13_0485:0.03671779155872757,Lembosia_albersii_MFLU13_0377:0.246565568801827):0.04235068942316076,(Aulographum_hederae_MFLUCC_13_0001:0.003095663094470176,Aulographum_hederae_CPC_21373:0.004144538912784549):0.4497731403195871):0.04564455723501767,(((Apiosporina_collinsii_CBS_118973:0.01016797376661278,(Gibbera_conferta_CBS_191_53:0.00745454290308894,(Venturia_inaequalis_CBS_176_42:0.001572664853778229,Venturia_populina_CBS_256_38_:0.006232153107671918):0.006785727111264937):0.01648644175745988):0.008575276049245942,Apiosporina_morbosa_Dimosp:0.01885809547758345):0.05725624941332553,(Phaeotrichum_benjaminii_CBS_541_72:0.01412047853709031,Trichodelitschia_bisporula_CBS_262_69v2:0.0535122475239601):0.1284881457511942):0.03153494229451076); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr86651] END;