#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 21, 2025; 11:41 GMT TreeBASE (cc) 1994-2008 Study reference: Mwenje E., Wingfield B.D., Coetzee M., & Wingfield M.J. 2003. Molecular characterisation of Armillaria species from Zimbabwe. Molecular Ecology, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S958] [ The following blocks are input data for analysis step 1620 ] BEGIN TAXA; TITLE TaxaForAnalysisStep1620; DIMENSIONS NTAX=13; TAXLABELS Armillaria_fuscipes_CMW2717 Armillaria_fuscipes_CMW2740 Armillaria_fuscipes_CMW3164 Armillaria_fuscipes_CMW3167 Armillaria_fuscipes_ZimP7 Armillaria_fuscipes_ZimZ2 Armillaria_heimii_CMW3152 Armillaria_heimii_CMW3173 Armillaria_heimii_CMW3955 Armillaria_sp._Zim40 Armillaria_sp._Zim55 Armillaria_sp._Zim56 Armillaria_sp._ZimZ1 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M479] TITLE 'IGS-1'; LINK TAXA = TaxaForAnalysisStep1620; DIMENSIONS NCHAR=1239; FORMAT DATATYPE=Standard SYMBOLS= "A C G T 0 1 2 3 4 5" MISSING=N GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Armillaria_fuscipes_CMW2717 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACG-ATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACTGTGTGTTGGGCGTACATGCTGGGCTGGTTGAGGGCGGGGAATGTAACCTATGCGCTCATAAACAGCATGTTGAATGGAGGGGTATGGATCCAAGCGTATTGT-------------ATATACGGTGTATGGAGTGCGGGTATACAGAAGAGAAGAGTATACAGTGCAGTACACAGTATATATATATATATATTATGTAATCTACATGACTTGGACTTGGACTTGTACTTGGACTTGGATCTTGGGTC----------TTGGGTTGAAATCA------------------------CCAAAGACAATGCAAGGAA-------------------------GCTAGTAGACAAGACGAC-------------------------------AAGTAAGCTACCAGGCAGACTTGTGAGTCTTGAGAGCTTGTACGCATCTCTTAGTTGGCGCGCATAGAGTCTTTGGACTTGGGACTTGGACACCCAATGGATTGCGGACTTGGACAGAATTGCAAGCTGCATTGA-GCGCTCGTACGCAT-GCATGCCTTACTTGTCTTGCA-----AGCTGCATCCATG--ACTTGCCCTCAAGCAAATG--CATTGAATGCGTCGACTTGCAAGCTAGTGTTGCGCATATTATGCATGTCTTACTTGCATTTCGCTAGTTAGCACATTGAC-TTGCAAGC---CAAGTTACGCTAGTTAGTTAGACAACCTTGGTTTGACTTTGGCAAATGCGTTCACTTGCAAGCTTAGTTGGACTATGATTTCGTGCATTGAAATACAAGTCAACATGCTAGCTAGCACTTCACGAATGGAACTTGGTTTATAG---CAAGTATGCCACCTATAGCCAAGTACGAAAGCATTGACTTGCAAGCTAAGCTTCGTTGGATTCTCTATTAGTTACATCTACTTGGACTATGGCTGACAGGCAAAAAGCAAAGGGGGACTTGTTGGCAGAATTGAACTTTTTCTTCGTTTACAGCGTGCACCGTGTGCCGTGCTGGGTCAGACTTAATGCCATGTT------------------------ACTATCAAAAACCACAGCACCCAGGATTCCCGCA-TGGTCC-CCCACCGTGGTA101111000000111100110111110111111111111101111100 Armillaria_fuscipes_CMW2740 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACG-ATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACTGTGTGTTGGGCGTACATGCTGGGCTGGTTGAGGGCGGGGAATGTAACCTATGCGCTCATAAACAGCATGTTGAATGGAGGGGTATGGATCCAAGCGTATTGT-------------ATATACGGTGTATGGAGTGCGGGTATACAGAAGAGAAGAGTATACAGTGCAGTACACAGTATATATATATATATATTATGTAATCTACATGACTTGGACTTGGACTTGTACTTGGACTTGGATCTTGGGTC----------TTGGGTTGAAATCA------------------------CCAAAGACAATGCAAGGAA-------------------------GCTTGTAGACAAGACGAC-------------------------------AAGTAAGCTACCAGGCAGACTTGTGAGTCTTGAGAGCTTGTACGCATCTCTTAGTTGGCGCGCATAGAGTCTTTGGACTTGGGACTTGGACACCCAATGGATTGCGGACTTGGACAGAATTGCAAGCTGCATTGA-GCGCTCGTACGCAT-GCATGCCTTACTTGTCTTGCA-----AGCTGCATCCATG--ACTTGCCCTCAAGCAAATG--CATTGAATGCGTCGACTTGCAAGCTAGTGTTGCGCATATTATGCATGTCTTACTTGCATTTCGCTAGTTAGCACATTGAC-TTGCAAGC---CAAGTTACGCTAGTTAGTTAGACAACCTTGGTTTGACTTTGGCAAATGCGTTCACTTGCAAGCTTAGTTGGACTATGATTTCGTGCATTGAAATACAAGTCAACATGCTAGCTAGCACTTCACGAATGGAACTTGGTTTATAG---CAAGTATGCCACCTATAGCCAAGTACGAAAGCATTGACTTGCAAGCTAAGCTTCGTTGGATTCTCTATTAGTTACATCTACTTGGACTATGGCTGACAGGCAAAAAGCAAAGGGGGACTTGTTGGCAGAATTGAACTTTTTCTTCGTTTACAGCGTGCACCGTGTGCCGTGCTGGGTCAGACTTAATGCCATGTT------------------------ACTATCAAAAACCACAGCACCCAGGATTCCCGCA-TGGTCC-CCCACCGTGGTA101111000000111100110111110111111111111101111100 Armillaria_fuscipes_CMW3164 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACGCATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACTGTGTGTTGGGCGTACATGCTGGGCTGGTTGAGGGCGGGGAATGTAACCTATGCGCTCATAAACAGCATGTTGAATGGAGGGGTATGGATCCAAGCGTATTGT-------------ATATACGGTGTATGGAGTGCGGGTATACAGAAGAGAAGAGTATACAGTGCAGTACACAGTATATATATATATATATTATGTAATCTACATGACTTGGACTTGGACTTGTACTTGGACTTGGATCTTGGGTC----------TTGGGTTGAAATCA------------------------CCAAAGACAATGCAAGGAA-------------------------GCTNGTAGACAAGACGAC-------------------------------AAGTAAGCTACCAGGCAGACTTGTGAGTCTTGAGAGCTTGTACGCATCTCTTAGTTGGCGCGCATAGAGTCTTTGGACTTGGGACTTGGACACCCAATGGATTGCGGACTTGGACAGAATTGCAAGCTGCATTGA-GCGCTCGTACGCAT-GCATGCCTTACTTGTCTTGCA-----AGCTGCATCCATG--ACTTGCCCTCAAGCAAATG--CATTGAATGCGTCGACTTGCAAGCTAGTGTTGCGCATATTATGCATGTCTTACTTGCATTTCGCTAGTTAGCACATTGAC-TTGCAAGC---CAAGTTACGCTAGTTAGTTAGACAACCTTGGTTTGACTTTGGCAAATGCGTTCACTTGCAAGCTTAGTTGGACTATGATTTCGTGCATTGAAATACAAGTCAACATGCTAGCTAGCACTTCACGAATGGAACTTGGTTTATAG---CAAGTATGCCACCTATAGCCAAGTACGAAAGCATTGACTTGCAAGCTAAGCTTCGTTGGATTCTCTATTAGTTACATCTACTTGGACTATGGCTGACAGGCAAAAAGCAAAGGGGGACTTGTTGGCAGAATTGAACTTTTTCTTCGTTTACAGCGTGCACCGTGTGCCGTGCTGGGTCAGACTTAATGCCATGTT------------------------ACTATCAAAAACCACAGCACCCAGGATTCCCGCA-TGGTCC-CCCACCGTGGTA101111000000111100110111110111111111111101111100 Armillaria_fuscipes_CMW3167 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACG-ATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACTGTGTGTTGGGCGTACATGCTGGGCTGGTTGAGGGCGGGGAATGTAACCTATGCGCTCATAAACAGCATGTTGAATGGAGGGGTATGGATCCAAGCGTATTGT-------------ATATACGGTGTATGGAGTGCGGGTATACAGAAGAGAAGAGTATACAGTGCAGTACACAGTATATATATATATATATTATGTAATCTACATGACTTGGACTTGGACTTGTACTTGGACTTGGATCTTGGGTC----------TTGGGTTGAAATCA------------------------CCAAAGACAATGCAAGGAA-------------------------GCTTGTAGACAAGACGAC-------------------------------AAGTAAGCTACCAGGCAGACTTGTGAGTCTTGAGAGCTTGTACGCATCTCTTAGTTGGCGCGCATAGAGTCTTTGGACTTGGGACTTGGACACCCAATGGATTGCGGACTTGGACAGAATTGCAAGCTGCATTGAAGCGCTCGTACGCAT-GCATGCCTTACTTGTCTTGCA-----AGCTGCATCCATG--ACTTGCCCTCAAGCAAATG--CATTGAATGCGTCGACTTGCAAGCTAGTGTTGCGCATATTATGCATGTCTTACTTGCATTTCGCTAGTTAGCACATTGAC-TTGCAAGC---CAAGTTACGCTAGTTAGTTAGACAACCTTGGTTTGACTTTGGCAAATGCGTTCACTTGCAAGCTTAGTTGGACTATGATTTCGTGCATTGAAATACAAGTCAACATGCTAGCTAGCACTTCACGAATGGAACTTGGTTTATAG---CAAGTATGCCACCTATAGCCAAGTACGAAAGCATTGACTTGCAAGCTAAGCTTCGTTGGATTCTCTATTAGTTACATCTACTTGGACTATGGCTGACAGGCAAAAAGCAAAGGGGGACTTGTTGGCAGAATTGAACTTTTTCTTCGTTTACAGCGTGCACCGTGTGCCGTGCTGGGTCAGACTTAATGCCATGTT------------------------ACTATCAAAAACCACAGCACCCAGGATTCCCGCA-TGGTCC-CCCACCGTGGTA101111000000111100110111110111111111111101111100 Armillaria_fuscipes_ZimP7 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACG-ATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACTGTGTGTTGGGCGTACATGCTGGGCTGGTTGAGGGCGGGGAATGTAACCTATGCGCTCATAAACAGCATGTTGAATGGAGGGGTATGGATCCAAGCGTATTGT-------------ATATACGGTGTATGGAGTGCGGGTATACAGAAGAGAAGAGTATACAGTGCAGTACACAGTATATATATATATATATTATGTAATCTACATGACTTGGACTTGGACTTGTACTTGGACTTGGATCTTGGGTC----------TTGGGTTGAAATCA------------------------CCAAAGACAATGCAAGGAA-------------------------GCTAGTAGACAAGACGAC-------------------------------AAGTAAGCTACCAGGCAGACTTGTGAGTCTTGAGAGCTTGTACGCATCTCTTAGTTGGCGCGCATAGAGTCTTTGGACTTGGGACTTGGACACCCAATGGATTGCGGACTTGGACAGAATTGCAAGCTGCATTGA-GCGCTCGTACGCAT-GCATGCCTTACTTGTCTTGCA-----AGCTGCATCCATG--ACTTGCCCTCAAGCAAATG--CATTGAATGCGTCGACTTGCAAGCTAGTGTTGCGCATATTATGCATGTCTTACTTGCATTTCGCTAGTTAGCACATTGAC-TTGCAAGC---CAAGTTACGCTAGTTAGTTAGACAACCTTGGTTTGACTTTGGCAAATGCGTTCACTTGCAAGCTTAGTTGGACTATGATTTCGTGCATTGAAATACAAGTCAACATGCTAGCTAGCACTTCACGAATGGAACTTGGTTTATAG---CAAGTATGCCACCTATAGCCAAGTACGAAAGCATTGACTTGCAAGCTAAGCTTCGTTGGATTCTCTATTAGTTACATCTACTTGGACTATGGCTGACAGGCAAAAAGCAAAGGGGGACTTGTTGGCAGAATTGAACTTTTTCTTCGTTTACAGCGTGCACCGTGTGCCGTGCTGGGTCAGACTTAATGCCATGTT------------------------ACTATCAAAAACCACAGCACCCAGGATTCCCGCA-TGGTCC-CCCACCGTGGTA101111000000111100110111110111111111111101111100 Armillaria_fuscipes_ZimZ2 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACG-ATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACTGTGTGTTGGGCGTACATGCTGGGCTGGTTGAGGGCGGGGAATGTAACCTATGCGCTCATAAACAGCATGTTGAATGGAGGGGTATGGATCCAAGCGTATTGT-------------ATATACGGTGTATGGAGTGCGGGTATACAGAAGAGAAGAGTATACAGTGCAGTACACAGTATATATATATATATATTATGTAATCTACATGACTTGGACTTGGACTTGTACTTGGACTTGGATCTTGGGTC----------TTGGGTTGAAATCA------------------------CCAAAGACAATGCAAGGAA-------------------------GCTAGTAGACAAGACGAC-------------------------------AAGTAAGCTACCAGGCAGACTTGTGAGTCTTGAGAGCTTGTACGCATCTCTTAGTTGGCGCGCATAGAGTCTTTGGACTTGGGACTTGGACACCCAA{CT}GGATTGCGGACTTGGACAGAATTGCAAGCTGCATTGA-GCGCTCGTACGCAT-GCATGCCTTACTTGTCTTGCA-----AGCTGCATCCATG--ACTTGCCCTCAAGCAAATG--CATTGAATGCGTCGACTTGCAAGCTAGTGTTGCGCATATTATGCATGTCTTACTTGCATTTCGCTAGTTAGCACATTGAC-TTGCAAGC---CAAGTTACGCTAGTTAGTTAGACAACCTTGGTTTGACTTTGGCAAATGCGTTCACTTGCAAGCTTAGTTGGACTATGATTTCGTGCATTGAAATACAAGTCAACATGCTAGCTAGCACTTCACGAATGGAACTTGGTTTATAG---CAAGTATGCCACCTATAGCCAAGTACGAAAGCATTGACTTGCAAGCTAAGCTTCGTTGGATTCTCTATTAGTTACATCTACTTGGACTATGGCTGACAGGCAAAAAGCAAAGGGGGACTTGTTGGCAGAATTGAACTTTTTCTTCGTTTACAGCGTGCACCGTG-GCCGTGCTGGGTCAGACTTAATGCCATGTT------------------------ACTATCAAAAACCACAGCACCCAGGATTCCCGCA-TGGTCC-CC-ACCGTGGTA101111000000111100110111110111111111111101111100 Armillaria_heimii_CMW3152 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTAC-CATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACGAAATGTTGGACGTACATGCTGGGCTCGTTGAGGGCGGGAAATGTAACCTATGCGCTCATAAACAGCATGTTTAATGGA--------------AGCCTATGGTGTATAATATTGGTATATACGGTGTACGGAGTACGGGTATACAGAAGAG-----TATACAGTACAGTAGACAGTATATATATATATA--TTATAT-ATCTA--TGACTCGGACTTGGACTTGTACTTGGACTTGGATCTTGGATCACAATGCAAGTAAGGTAGTAGGCAATGCAACGCAAGGCTAGTAAACGACGCAAGGCAATGCAAGGATAGTAGACAATGCAAGGCAATGCAAGGCTAGTAGACAACGCAAGGC-----------------------------AAGTAAGCTAGCAGGCAGACTTGTGAG--TTGAGAGCTTGTACGCATGTCTTAGTTGGTGTGCA-------------------------------------TTGCGGACTTGG---------------GCATTGA-GGGCTTGTATGCATCGCA--CCTTA-CGGACTTGGACATTGAGGTGTATGCACGGACATTGAGGTGTATGCAC-GGACATTGAG-------------------GTGT----------ATGCA------------------------CGGACATTGAG-GTGTATGCACGCACCTTACG-----------GAC--------------------------------------------TTGGACATTGAGGGCTTGTA-----------------------------------CGCACGCACCTTACTTTGTTGGCGCAA------------------------AAAT-AAAGACTTGCAAGCTAAGCTTGATTGGACT---------------------GGAGT-------------------------------------CAGACTTGA------TATTCGT---------------------------------ACTTAATGCTATCTTGCTATCTTACTATCTT--------ACTATCAAAAACCACAGCACCCAGGATTCCCG-CGTGGTCGGCCCACCGTGGTA010001111100000011241000000410100000000010000010 Armillaria_heimii_CMW3173 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACGCATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACGAAATGTTGGACGTACATGCTGGGCTCGTTGAGGGCGGGAAATGTAACCTATGCGCTCATAAACAGCATGTTTAATGGA--------------AGCCTATTGTGTATAATATTGGTATATACGGTGTACGGAGTACGGGTATACAGAAGAG-----TATACAGTACAGTAGACAGTATATATATATATA--TTATAT-ATCTA--TGACTTGGACTTGGACTTGTACTTGGACTTGGATCTTGGATCACAATGCAAGTAAGGTAGTAGGCAATGCAACGCAAGGCTAGTAGACAACGCAAGGCAATGCAAGGATAGTAGACAATGCAAGGCAATGCAAGGCTAGTAGACAACGCAACGCAATGCAAGGCTAGTAGACAACGCAAG-GCAAGTAAGCTAGCAGGCAGACTTGTGAG--TTGAGAGCTTGTACGCATGTCTTAGTTGGTGTGCA-------------------------------------TTGCGGACTTGG---------------GCATTGA-GGGCTTGTATGCA-CGCA--CCTTAACGGACTTGGACATTGAGGTGTATGCACG---CTT--------------GGACATTGAG-------------------GTGT----------ATGCA------------------------CGGACATTGAG-GTGTATGCACGCACCTTACG-----------GAC--------------------------------------------TTGGACATTGAGGGCTTGTA-----------------------------------CGCACGCACCTTACTTTGTTGGCGCAA------------------------AAAT-AAAGACTTGCAAGCTAAGCTTGATTGGACT---------------------GGAGT-------------------------------------CAGACTTGA------TATTCGT---------------------------------ACTTAATGCTATCTTGCTATCTTACTATCTT--------ACTATCAAAAACCACAGCACCCAGGATTGCCCACGTGGTCC-CCCACCGTGGTA010001111111000010001000000410100000000010000010 Armillaria_heimii_CMW3955 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACGCATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACGAAATGTTGGACGTACATGCTGGGCTCGTTGAGGGCGGGAAATGTAACCTATGCGCTCATAAACAGCATGTTTAATGGA--------------AGCCTATTGTGTATAATATTGGTATATACGGTGTACGGAGTACGGGTATACAGAAGAG-----TATACAGTACAGTAGACAGTATATATATATATA--TTATAT-ATCTA--TGACTTGGACTTGGACTTGTACTTGGACTTGGATCTTGGATCACAATGCAAGTAAGGTAGTAGGCAATGCAACGCAAGGCTAGTAGACAACGCAAGGCAATGCAAGGATAGTAGACAATGCAAGGCAATGCAAGGCTAGTAGACAACGCAACGCAATGCAAGGCTAGTAGACAACGCAAGGCGAAGTAAGCTAGCAGGCAGACTTGTGAG--TTGAGAGCTTGTACGCATGTCTTAGTTGGTGTGCA-------------------------------------TTGCGGACTTGG---------------GCATTGA-GGGCTTGTATGCA-CGCA--CCTTA-CGGACTTGGACATTGAGGTGTATGCACGCACCTTACGGACTT------GGACATTGAG-------------------GTGT----------ATGCA------------------------CGGACATTGAG-GTGTATGCACGCACCTTACG-----------GAC--------------------------------------------TTGGACATTGAGGGCTTGTA-----------------------------------CGCACGCACCTTACTTTGTTGGCGCAA------------------------AAAT-AAAGACTTGCAAGCTAAGCTTGATTGGACT---------------------GGAGT-------------------------------------CAGACTTGA------TATTCGT---------------------------------ACTTAATGCTATCTTGCTATCTTACTATCTTACTATCTTACTATCAAAAACCACAGCACCCAGGATTCCCG-CGTGGTCC-CCCACCGTGGTA010001111111000011401000000410100000000010000011 Armillaria_sp._Zim40 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACG-ATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACGAAATGTTGGACGTACATGCTGGGCTCGTTGAGGGCGGGAAATGTAACCTATGCGCTCATAAACAGCATGTTTAATGGA--------------AGCCTATTGTGTATAATATTGGTATATACGGTGTACGGAGTACGGGTATACAGAAGAG-----TATACAGTACAGTAGACAGTATATATATATATA--TTATAT-ATCTA--TGAC------------------TTGGACTTGGATCTTGGATCACAATGCAAGTAAGGTAGTAGGCAATGCAACGCAAGGCTAGTAGACAACGCAAGGCAATGCAAGGATAGTAGACAATGCAAGGCAATGCAAGGCTAGTAGACAACGCAACGCAATGCAAGGCTAGTAGACAACGCAAC-GCAAGTAAGCTAGCAGGCAGACTTGTGAG--TTGAGAGCTTGTACGCATGTCTTAGTTGGTGTGCA-------------------------------------TTGCGGACTTGG---------------GCATTGA-GGGCTTGTATGCA-CGCA--CCTTA-CGGACTTGGACATTGAGGTGTATGCACG---CTT--------------GGACATTGAG-------------------GTGT----------ATGCA----------------CGCT----TGGACATTGAGGGTGTATGCACG---CTTG-------------GAC---ATTGAGGTGTA--TGCACGC------ACCTTACGGA----CTTGGACATTGAGGGCTTGTA-----------------------------------CGCACGCACCTTACTTTGTTGGCGCAA------------------------AAAT-AAAGACTTGCAAGCTAAGCTTGATTGGACT---------------------GGAGT-------------------------------------CAGACTTGA------TATTCGT---------------------------------ACTTAATGCTATCTTGCTATCTTACTATCTTACTATCTTACTATCAAAAACCACAGCACCCAGGATTCCCG-CGTGGTCC-CCCACCGTGGTA010000111111000010001000100000102202020010000011 Armillaria_sp._Zim55 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACG-ATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACGAAATGTTGGACGTACATGCTGGGCTCGTTGAGGGCGGGAAATGTAACCTATGCGCTCATAAACAGCATGTTTAATGGA--------------AGCCTATTGTGTATAATATTGGTATATACGGTGTACGGAGTACGGGTATACAGAAGAG-----TATACAGTACAGTAGACAGTATATATATATATA--TTATAT-ATCTA--TGACTTGGACTTGGACTTGTACTTGGACTTGGATCTTGGATCACAATGCAAGTAAGGTAGTAGGCAATGCAACGCAAGGCTAGTAGACAACGCAAGGCAATGCAAGGATAGTAGACAATGCAAGGCAATGCAAGGCTAGTAGACAACGCAACGCAATGCAAGGCTAGTAGACAACGCAAG-GCAAGTAAGCTAGCAGGCAGACTTGTGAG--TTGAGAGCTTGTACGCATGTCTTAGTTGGTGTGCA-------------------------------------TTGCGGACTTGG---------------GCATTGA-GGGCTTGTATGCA-CGCA--CCTTA-CGGACTTGGACATTGAGGTGTATGCACGCACCTTACGGACTT------GGACATTGAG-------------------GTGT----------ATGCA------------------------CGGACATTGAG-GTGTATGCACGCACCTTACG-----------GAC--------------------------------------------TTGGACATTGAGGGCTTGTA-----------------------------------CGCACGCACCTTACTTTGTTGGCGCAA------------------------AAAT-AAAGACTTGCAAGCTAAGCTTGATTGGACT---------------------GGAGT-------------------------------------CAGACTTGA------TATTCGT---------------------------------ACTTAATGCTATCTTGCTATCTTACTATCTTACTATCTTACTATCAAAAACCACAGCACCCAGGATTCCCG-CGTGGTCC-CCCACCGTGGTA010001111111000011401000000410100000000010000011 Armillaria_sp._Zim56 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACG-ATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACGAAATGTTGGACGTACATGCTGGGCTCGTTGAGGGCGGGAAATGTAACCTATGCGCTCATAAACAGCATGTTTAATGGA--------------AGCCTATTGTGTATAATATTGGTATATACGGTGTACGGAGTACGGGTATACAGAAGAG-----TATACAGTACAGTAGACAGTATATATATATATA--TTATAT-ATCTA--TGACTTGGACTTGGACTTGTACTTGGACTTGGATCTTGGATCACAATGCAAGTAAGGTAGTAGGCAATGCAACGCAAGGCTAGTAGACAACGCAAGGCAATGCAAGGATAGTAGACAATGCAAGGCAATGCAAGGCTAGTAGACAACGCAACGCAATGCAAGGCTAGTAGACAACGCAAG-GCAAGTAAGCTAGCAGGCAGACTTGTGAG--TTGAGAGCTTGTACGCATGTCTTAGTTGGTGTGCA-------------------------------------TTGCGGACTTGG---------------GCATTGA-GGGCTTGTATGCA-CGCA--CCTTA-CGGACTTGGACATTGAGGTGTATGCACGCACCTTACGGACTT------GGACATTGAG-------------------GTGT----------ATGCA------------------------CGGACATTGAG-GTGTATGCACGCACCTTACG-----------GAC--------------------------------------------TTGGACATTGAGGGCTTGTA-----------------------------------CGCACGCACCTTACTTTGTTGGCGCAA------------------------AAAT-AAAGACTTGCAAGCTAAGCTTGATTGGACT---------------------GGAGT-------------------------------------CAGACTTGA------TATTCGT---------------------------------ACTTAATGCTATCTTGCTATCTTACTATCTTACTATCTTACTATCAAAAACCACAGCACCCAGGATTCCCG-CGTGGTCC-CCCACCGTGGTA010001111111000011401000000410100000000010000011 Armillaria_sp._ZimZ1 GGGGTACTGTACGTGGTAGAGTAGCCTTGTTGCTACG-ATCCACTGAGGTTAAGCCCTTGTTCTAAAGATTTGTTCAACGAAATGTTGGACGTACATGCTGGGCTCGTTGAGGGCGGGAAATGTAACCTATGCGCTCATAAACAGCATGTTTAATGGA--------------AGCCTATTGTGTATAATATTGGTATATACGGTGTACGGAGTACGGGTATACAGAAGAG-----TATACAGTACAGTAGACAGTATATATATATATA--TTATAT-ATCTA--TGAC------------------TTGGACTTGGATCTTGGATCACAATGCAAGTAAGGTAGTAGGCAATGCAACGCAAGGCTAGTAGACAACGCAAGGCAATGCAAGGATAGTAGACAATGCAAGGCAATGCAAGGCTAGTAGACAACGCAACGCAATGCAAGGCTAGTAGACAACGCAAC-GCAAGTAAGCTAGCAGGCAGACTTGTGAG--TTGAGAGCTTGTACGCATGTCTTAGTTGGTGTGCA-------------------------------------TTGCGGACTTGG---------------GCATTGA-GGGCTTGTATGCA-CGCA--CCTTA-CGGACTTGGACATTGAGGTGTATGCACG---CTT--------------GGACATTGAG-------------------GTGT----------ATGCA----------------CGCT----TGGACATTGAGGGTGTATGCACG---CTTG-------------GAC---ATTGAGGTGTA--TGCACGC------ACCTTACGGA----CTTGGACATTGAGGGCTTGTA-----------------------------------CGCACGCACCTTACTTTGTTGGCGCAA------------------------AAAT-AAAGACTTGCAAGCTAAGCTTGATTGGACT---------------------GGAGT-------------------------------------CAGACTTGA------TATTCGT---------------------------------ACTTAATGCTATCTTGCTATCTTACTATCTTACNATCTGACTATCAAAAACCACAGCACCCAGGATTCCCG-CGTGGTCC-CCCACCGTGGTA010000111111000010001000100000102202020010000011 ; END; BEGIN SETS; CHARSET region_45 (CHARACTERS = 'IGS-1') = 1053-1058; CHARSET region_48 (CHARACTERS = 'IGS-1') = 1130-1137; CHARSET region_23 (CHARACTERS = 'IGS-1') = 711-720; CHARSET region_41 (CHARACTERS = 'IGS-1') = 916-918; CHARSET region_29 (CHARACTERS = 'IGS-1') = 780-781; CHARSET region_44 (CHARACTERS = 'IGS-1') = 1007-1043; CHARSET region_2 (CHARACTERS = 'IGS-1') = 183-195; CHARSET region_32 (CHARACTERS = 'IGS-1') = 796-798; CHARSET region_42 (CHARACTERS = 'IGS-1') = 922-945; CHARSET region_47 (CHARACTERS = 'IGS-1') = 1114-1129; CHARSET region_26 (CHARACTERS = 'IGS-1') = 746-749; CHARSET region_10 (CHARACTERS = 'IGS-1') = 437-438; CHARSET region_31 (CHARACTERS = 'IGS-1') = 793-795; CHARSET region_13 (CHARACTERS = 'IGS-1') = 495-496; CHARSET region_15 (CHARACTERS = 'IGS-1') = 582-595; CHARSET region_25 (CHARACTERS = 'IGS-1') = 742-745; CHARSET region_14 (CHARACTERS = 'IGS-1') = 532-568; CHARSET region_1 (CHARACTERS = 'IGS-1') = 159-172; CHARSET region_34 (CHARACTERS = 'IGS-1') = 803-808; CHARSET region_21 (CHARACTERS = 'IGS-1') = 679-680; CHARSET region_7 (CHARACTERS = 'IGS-1') = 326-336; CHARSET region_12 (CHARACTERS = 'IGS-1') = 466-467; CHARSET region_24 (CHARACTERS = 'IGS-1') = 726-741; CHARSET region_3 (CHARACTERS = 'IGS-1') = 231-235; CHARSET region_27 (CHARACTERS = 'IGS-1') = 770-772; CHARSET region_20 (CHARACTERS = 'IGS-1') = 672-677; CHARSET region_30 (CHARACTERS = 'IGS-1') = 782-792; CHARSET region_33 (CHARACTERS = 'IGS-1') = 799-802; CHARSET region_36 (CHARACTERS = 'IGS-1') = 812-818; CHARSET region_4 (CHARACTERS = 'IGS-1') = 269-270; CHARSET region_11 (CHARACTERS = 'IGS-1') = 439-465; CHARSET region_39 (CHARACTERS = 'IGS-1') = 835-839; CHARSET region_37 (CHARACTERS = 'IGS-1') = 819-824; CHARSET region_43 (CHARACTERS = 'IGS-1') = 981-1001; CHARSET region_35 (CHARACTERS = 'IGS-1') = 810-811; CHARSET region_18 (CHARACTERS = 'IGS-1') = 658-659; CHARSET region_8 (CHARACTERS = 'IGS-1') = 351-374; CHARSET region_46 (CHARACTERS = 'IGS-1') = 1066-1098; CHARSET region_19 (CHARACTERS = 'IGS-1') = 664-671; CHARSET region_17 (CHARACTERS = 'IGS-1') = 640-644; CHARSET region_40 (CHARACTERS = 'IGS-1') = 860-894; CHARSET region_22 (CHARACTERS = 'IGS-1') = 688-706; CHARSET region_5 (CHARACTERS = 'IGS-1') = 283-284; CHARSET region_38 (CHARACTERS = 'IGS-1') = 825-834; CHARSET region_28 (CHARACTERS = 'IGS-1') = 773-775; CHARSET region_16 (CHARACTERS = 'IGS-1') = 622-623; CHARSET region_6 (CHARACTERS = 'IGS-1') = 289-306; CHARSET region_9 (CHARACTERS = 'IGS-1') = 394-418; END; [ The following blocks are output data for analysis step 1620 ] BEGIN TREES; TITLE Tb6396; LINK TAXA = TaxaForAnalysisStep1620; TREE Fig._2 = [&R] ((((Armillaria_fuscipes_ZimZ2,((Armillaria_fuscipes_CMW2740,Armillaria_fuscipes_CMW3167),Armillaria_fuscipes_CMW3164)),Armillaria_fuscipes_ZimP7)Armillaria_Group_I,Armillaria_fuscipes_CMW2717)Armillaria_fuscipes,(((Armillaria_heimii_CMW3173,((Armillaria_sp._Zim55,Armillaria_sp._Zim56)Armillaria_Group_III,Armillaria_heimii_CMW3955)),Armillaria_heimii_CMW3152)Armillaria_heimii,(Armillaria_sp._ZimZ1,Armillaria_sp._Zim40)Armillaria_Group_II)); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr879] END;