#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 21, 2025; 11:39 GMT TreeBASE (cc) 1994-2008 Study reference: Conran J. 1989. Cladistic analysis of some net-veined Lilliaflorae. Plant Systematics and Evolution, 168: 123-141. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S227] [ The following blocks are input data for analysis step 166 ] BEGIN TAXA; TITLE TaxaForAnalysisStep166; DIMENSIONS NTAX=19; TAXLABELS Alstroemeria Asparagus Convallaria Dioscoreaceae Geitonoplesium Herreria Luzuriaga Peliosanthes Petermannia Philesia Phormium Ripogonum Ruscus Smilax Stemonaceae Taccaceae Tricyrtis Trillium Uvularia ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M554] TITLE Appendix_2; LINK TAXA = TaxaForAnalysisStep166; DIMENSIONS NCHAR=46; FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -; MATRIX [ 10 20 30 40 ] [ . . . . ] Alstroemeria 1000001111000000011111000000011000101010100101 Asparagus 1101110??1???0111???00010000000000011110110?01 Convallaria 1001110111110101100000010001100000111010110111 Dioscoreaceae 01011000000100011???000001000111000??000010100 Geitonoplesium 00011111111110110???00001110000010011110110101 Herreria ?0110101111101111???00000?0000?000?11110010101 Luzuriaga 1001111110111111000000001000001011111011010110 Peliosanthes 10001101111100111???00010000010000111010110101 Petermannia 00111001000010011???00000000111100000010000100 Philesia 000110000001000??????1000001101100011010010000 Phormium 1101110??1???11??11100010000001000111001010?00 Ripogonum 00110000000000011???0000000000100001?001011000 Ruscus 1101110??1???1111???00010000000000011110110?00 Smilax 011110000000000111??00000001100001011000010100 Stemonaceae 000?100000???0011???0000000000?0010??0000?1000 Taccaceae 10000000000100011???00000110010100000010100100 Tricyrtis 100000000000010??????001000001?0001??010000?00 Trillium 1000100001000000011110000001101000001000011100 Uvularia 1001110111110101111111110000001110111010011111 ; END; [ The following blocks are output data for analysis step 166 ] BEGIN TREES; TITLE Tb4946; LINK TAXA = TaxaForAnalysisStep166; TREE Fig._2A = [&R] ((((Trillium,(Alstroemeria,Tricyrtis))Liliales,((Philesia,(Petermannia,(Taccaceae,Dioscoreaceae))),(Smilax,(Stemonaceae,Ripogonum)))Dioscoreales),(Uvularia,((Peliosanthes,Convallaria),(((Luzuriaga,Geitonoplesium),Herreria),(Phormium,(Asparagus,Ruscus)))))Asparagales)); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4326] END; BEGIN TREES; TITLE Tb4946; LINK TAXA = TaxaForAnalysisStep166; TREE Fig._2B = [&R] (((Tricyrtis,Alstroemeria),Trillium),(((Philesia,Smilax),((Stemonaceae,Ripogonum),(Petermannia,(Taccaceae,Dioscoreaceae)))),((Luzuriaga,Geitonoplesium),(Herreria,((Peliosanthes,(Convallaria,Uvularia)),(Phormium,(Asparagus,Ruscus))))))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4327] END;