#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on November 15, 2026; 4:14 GMT TreeBASE (cc) 1994-2008 Study reference: Schielke A., Ibrahim V., Czogiel I., Faber M., Schrader C., Dremsek P., Ulrich R.G., & Johne R. 2015. Hepatitis E virus antibody prevalence in hunters from a district 1 in Central 2 Germany, 2013: a cross-sectional study providing evidence for the benefit of 3 protective gloves during disembowelling of wild boars. BMC Infectious Diseases, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S18364] [ The following blocks are input data for analysis step 17104 ] BEGIN TAXA; TITLE TaxaForAnalysisStep17104; DIMENSIONS NTAX=22; TAXLABELS Hepatitis_E_virus_Au1_AF279123 'Hepatitis E virus Ch-T11 AF151962' 'Hepatitis E virus HE-JA10 AB360348' 'Hepatitis E virus HEV-US1 AF060668' Hepatitis_E_virus_It1_AF110390 Hepatitis_E_virus_Liver_KP127667 Hepatitis_E_virus_Liver_KP127668 Hepatitis_E_virus_Liver_KP127670 Hepatitis_E_virus_Mexican_M74506 Hepatitis_E_virus_Muscle_KP127669 Hepatitis_E_virus_Osh_205_AF455784 'Hepatitis E virus SAR-55 M80581' Hepatitis_E_virus_WB69_KF303500 'Hepatitis E virus rat/R63/DEU/2009 R63 GU345042' Hepatitis_E_virus_wbGER155_FJ748528 Hepatitis_E_virus_wbGER27_FJ705359 Swine_hepatitis_E_virus_Arkell_AY115488 Swine_hepatitis_E_virus_BB02_FJ998008 Swine_hepatitis_E_virus_NLSW20_AF336290 Swine_hepatitis_E_virus_NLSW22_AF336291 Swine_hepatitis_E_virus_NLSW97_AF336296 Swine_hepatitis_E_virus_No._570_swJ570_AB073912 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M34003] TITLE 'HEV-alignment-Schielke-2015'; LINK TAXA = TaxaForAnalysisStep17104; DIMENSIONS NCHAR=148; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 ] [ . . . . . . . . . . . . . . . ] Hepatitis_E_virus_Au1_AF279123 GGGACAGTTATTCTACTCCCGCCCTGT{CT}GTCTCAGCCAATGGCGAGCCGACTGTTAAATTATATACATCTGTAGAGAATGCGCAGCAGGACAAGGGGATTGCCATCCCACATGATATAGATCTGGGCGACTCTCGTGTGGTGATCCAG 'Hepatitis E virus Ch-T11 AF151962' TGGTCAGTTGTTTTATTCCCGCCCCGTCGTCTCGGCCAATGGCGAGCCGACAGTGAAACTTTACACCTCAGTCGAGAATGCTCAGCAGGATAAAGGGATTGCTATTCCACATGACATTGATCTTGGTGAGTCCCGAGTTGTTATCCAA 'Hepatitis E virus HE-JA10 AB360348' GGGTCAACTGTTTTACTCCCGCCCTGTTGTCTCGGCCAATGGCGAGCCAACAGTAAAGTTATATACATCTGTTGAGAATGCGCAGCAAGATAAGGGCATTACCATCCCACACGATATAGATCTGGGTGACTCCCGTGTGGTTATTCAG 'Hepatitis E virus HEV-US1 AF060668' GGGTCAACTGTTTTACTCCCGCCCTGTTGTCTCGGCCAATGGCGAGCCAACAGTAAAGTTATACACATCTGTTGAGAATGCGCAGCAAGACAAGGGCATCACCATTCCACACGACATAGATTTAGGTGACTCCCGTGTGGTTATCCAG Hepatitis_E_virus_It1_AF110390 GGGTCAACTGTTCTACTCCCGCCCTGTCGTCTCAGCCAATGGCGAGCCGACTGTCAAGTTATACACATCTGTTGAGAATGCACAGCAGGATAAGGGGATAGCTATTCCACATGACATAGATTTGGGCGACTCTCGTGTGGTGATCCAG Hepatitis_E_virus_Liver_KP127667 GGGTCAACTGTTCTACTCCCGCCCCGTTGTCTCGGCCAATGGCGAGCCGACAGTAAAGCTATATACATCTGTTGAGAATGCGCAGCAGGACAAGGGGATTACCATCCCACACGATATAGATTTGGGCGACTCTCGTGTAGTCATTCAG Hepatitis_E_virus_Liver_KP127668 GGGTCAACTGTTCTACTCCCGCCCCGTTGTCTCGGCCAATGGCGAGCCGACAGTAAAGCTATATACATCTGTTGAGAATGCGCAGCAGGACAAGGGGATTACCATCCCACACGATATAGATTTGGGCGACTCTCGTGTAGTCATTCAG Hepatitis_E_virus_Liver_KP127670 GGGCCAATTGTTTTACTCCCGCCCTGTTGTCTCGGCCAATGGCGAGCCAACTGTAAAGTTATATACATCTGTTGAGAATGCGCAGCAGGATAAGGGCATTGCCATACCACATGATATAGATCTGGGTGACTCCCGTGTGGTTATCCAG Hepatitis_E_virus_Mexican_M74506 CGGGCAACTGTTTTATTCCCGCCCGGTTGTCTCAGCCAATGGCGAGCCAACCGTGAAGCTCTATACATCAGTGGAGAATGCTCAGCAGGATAAGGGTGTTGCTATCCCCCACGATATCGATCTTGGTGATTCGCGTGTGGTCATTCAG Hepatitis_E_virus_Muscle_KP127669 GGGTCAACTGTTCTACTCCCGCCCCGTTGTCTCGGCCAATGGCGAGCCGACAGTAAAGCTATATACATCTGTTGAGAATGCGCAGCAGGACAAGGGGATTACCATCCCACACGATATAGATTTGGGCGACTCTCGTGTAGTCATTCAG Hepatitis_E_virus_Osh_205_AF455784 GGGTCAATTGTTTTACTCCCGTCCTGTCGTCTCAGCCAATGGCGAGCCGACTGTTAAACTGTACACCTCCGTCGAGAATGCACAGCAGGATAAGGGTATTGCCATACCGCATGATATAGACTTAGGGGACTCTCGTGTGGTTATCCAG 'Hepatitis E virus SAR-55 M80581' TGGCCAGCTGTTCTACTCTCGCCCCGTCGTCTCAGCCAATGGCGAGCCGACTGTTAAGCTGTATACATCTGTGGAGAATGCTCAGCAGGATAAGGGTATTGCAATCCCGCATGACATCGACCTCGGGGAATCCCGTGTAGTTATTCAG Hepatitis_E_virus_WB69_KF303500 GGGTCAACTGTTCTACTCCCGCCCCGTTGTCTCGGCCAATGGCGAGCCGACAGTAAAGCTATATACATCTGTTGAGAATGCGCAGCAGGACAAGGGCATTACCATCCCACACGATATAGATCTGGGTGACTCCCGTGTAGTCATTCAG 'Hepatitis E virus rat/R63/DEU/2009 R63 GU345042' AGGGCAGCTGTTTTACGGCCGCCCTCAGGTGTCTGAGAACGGTGAGCCCTCTGTCAAACTCTACACCTCTGTTGAGGCCGCCCAATTAGACCAAGGTGTGACAATACCTCATGATATAGACCTAGGGTTGTCGACTGTCACACTGCAA Hepatitis_E_virus_wbGER155_FJ748528 GGGTCAACTGTTCTACTCCCGCCCTGTTGTCTCGGCCAATGGCGAGCCAACAGTAAAGTTGTATACATCTGTCGAGAATGCGCAGCAAGACAAGGGCATTACCATCCCACACGATATAGATTTGGGTGACTCCCGTGTGGTTATTCAG Hepatitis_E_virus_wbGER27_FJ705359 GGGACAGTTATTTTACTCCCGCCCTGTCGTCTCAGCCAATGGCGAGCCGACTGTCAAGTTATACACATCTGTAGAGAATGCGCAGCAGGATAAAGGGATCGCTATCCCACATGATATAGATCTGGGTGACTCCCGTGTGGTCGTCCAA Swine_hepatitis_E_virus_Arkell_AY115488 GGGTCAACTGTTCTACTCCCGCCCTGTTGTCTCAGCCAATGGCGAGCCAACCGTAAAGTTATATACATCTGTCGAGAATGCACAGCAAGATAAGGGCATTACCATCCCGCATGATATAGACTTGGGGGACTCCCGTGTGGTTATCCAG Swine_hepatitis_E_virus_BB02_FJ998008 GGGACAGTTGTTCTACTCCCGCCCTGTCGTTTCGGCCAATGGCGAGCCGACTGTTAAATTATATACATCTGTAGAGAATGCACAGCAAGATAAGGGGATTGCCATCCCGCATGACATAGATCTGGGTGACTCTCGTGTGGTGATCCAG Swine_hepatitis_E_virus_NLSW20_AF336290 AGGCCAGCTATTTTACTCCCGTCCGGTTGTCTCAGCCAATGGCGAGCCGACTGTTAAGTTATACACCTCCGTCGAGAATGCACAGCAGGATAAGGGCATTGCTATACCGCATGATATAGATTTGGGAGATTCCCGTGTGGTTATTCAG Swine_hepatitis_E_virus_NLSW22_AF336291 GGGTCAATTGTTTTACTCCCGCCCTGTTGTCTCGGCCAATGGCGAGCCAACAGTAAAGTTGTATACATCTGTTGAGAATGCGCAGCAAGATAAGGGCATCACCATTCCACATGATATAGATCTTGGTGACTCCCGTGTGGTTATTCAG Swine_hepatitis_E_virus_NLSW97_AF336296 AGGTCAATTGTTTTACTCCCGCCCGGTTGTCTCAGCCAATGGCGAGCCGACTGTTAAGTTGTACACCTCTGTCGAGAATGCACAGCAGGACAAGGGCATTGCTATACCACACGATATAGATCTAGGGGATTCTCGTGTGGTTATACAA Swine_hepatitis_E_virus_No._570_swJ570_AB073912 GGGTCAGCTCTTCTACTCCCGCCCTGTCGTCTCGGCCAATGGCGAGCCGACTGTAAAGTTGTATACATCTGTTGAGAATGCACAGCAGGATAAAGGCATCACCATCCCGCACGATATAGATCTTGGTGACTCCCGTGTGGTTATTCAG ; END; [ The following blocks are output data for analysis step 17104 ] BEGIN TREES; TITLE 'HEV-alignment-Schielke-2015'; LINK TAXA = TaxaForAnalysisStep17104; TREE 'PHYLIP 1+' = [&U] ((Swine_hepatitis_E_virus_Arkell_AY115488:0.05542,(Hepatitis_E_virus_Liver_KP127670:0.02714,(Swine_hepatitis_E_virus_NLSW22_AF336291:0.02724,('Hepatitis E virus HEV-US1 AF060668':0.03798,('Hepatitis E virus HE-JA10 AB360348':0.01147,Hepatitis_E_virus_wbGER155_FJ748528:0.02351)174:0.00555)88:0.00106)214:0.01816)84:0.01012),((Swine_hepatitis_E_virus_No._570_swJ570_AB073912:0.06173,(Hepatitis_E_virus_WB69_KF303500:0.00809,(Hepatitis_E_virus_Liver_KP127668:0.0,(Hepatitis_E_virus_Muscle_KP127669:0.0,Hepatitis_E_virus_Liver_KP127667:0.0)983:0.0)995:0.01954)969:0.05218)67:0.00379,((Hepatitis_E_virus_It1_AF110390:0.05402,(Hepatitis_E_virus_wbGER27_FJ705359:0.06845,(Hepatitis_E_virus_Au1_AF279123:0.02801,Swine_hepatitis_E_virus_BB02_FJ998008:0.0373)694:0.01636)344:0.00864)409:0.01417,((Hepatitis_E_virus_Osh_205_AF455784:0.0648,(Swine_hepatitis_E_virus_NLSW20_AF336290:0.06483,Swine_hepatitis_E_virus_NLSW97_AF336296:0.05609)385:0.00823)280:0.01773,(('Hepatitis E virus Ch-T11 AF151962':0.12315,'Hepatitis E virus rat/R63/DEU/2009 R63 GU345042':0.41782)124:0.00432,('Hepatitis E virus SAR-55 M80581':0.08669,Hepatitis_E_virus_Mexican_M74506:0.10714)298:0.00918)93:0.00856)366:0.01931)477:0.0198)160) [%setBetweenBits = impossible unrooted = on ]; [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr91469] END;