#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 13, 2025; 20:53 GMT TreeBASE (cc) 1994-2008 Study reference: Cossard G., Sannier J., Sauquet H., Damerval C., Ronse de craene L., Jabbour F., & Nadot S. 2016. Subfamilial and tribal relationships of Ranunculaceae: evidence from eight molecular markers. Plant Systematics and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S18509] [ The following blocks are input data for analysis step 17580 ] BEGIN TAXA; TITLE TaxaForAnalysisStep17580; DIMENSIONS NTAX=39; TAXLABELS Aconitum_anthora Aconitum_lycoctonum Aconitum_napellus Actaea_cordifolia Actaea_racemosa Actaea_simplex Adonis_vernalis Anemone_bracteata Anemone_hepatica Anemone_nemorosa Anemone_pulsatilla Aquilegia_atrata Aquilegia_chrysantha Aquilegia_ecalcarata Asteropyrum_cavaleriei Callianthemum_anemonoides Caltha_leptosepala Ceratocephala_falcata Clematis_apiifolia Consolida_regalis Coptis_quinquefolia Delphinium_cheilanthum Delphinium_pictum Dichocarpum_stoloniferum Eranthis_cilicica Eranthis_hyemalis Ficaria_verna Glaucidium_palmatum Hydrastis_canadensis Isopyrum_thalictroides Nigella_damascena Nigella_sativa Paraquilegia_anemonoides Ranunculus_repens Semiaquilegia_adoxoides Thalictrum_aquilegiifolium Thalictrum_minus Trautvetteria_carolinensis Xanthorhiza_simplicissima ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M34691] TITLE Ranunculaceae_CYC1; LINK TAXA = TaxaForAnalysisStep17580; DIMENSIONS NCHAR=384; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Aconitum_anthora AGACTGTCACTTGAAATCGCTCACAGATTCTTTATGGTTCAAGATATGCTTCGTTTCGATAAAGCAAGTAAA---ACAGTTGAATGGTTGTTAACAAAGTCACAGGAGGCAATTGATGACCTTACTACAACT---GTGTCC---ATGACAAAGCCAAGCTGCACAGGAAGTGCCAAAAGTACTGTGTCCTCTACTTCAGAGTGTGAAGCTGTCTCT------------------ACCGAC------GAATATCTTCAGGTACTCAACTTATCC---AACCTCAAATCT---TCG------TCAGGGATCGGTAAAGCCAGAAGGACTAGACAA---ATATGTAAACCCACATGTAAACTCGCCGCAAAGGAATCTAGAGATAAG Aconitum_lycoctonum -GGCTCTCTTTTGATATCGCCCGTAGGTTCTTTAGGGTTCAAGACATGCTTGGGTTCGATAAAGCTAGCAAA---ACCGTGGAATGGCTGTTGATAAAGTCCGAGGCAGCCATCAATGAGCTCTCGAGTAGT---GTGTCC---CAGCCGAAACTCAGCTTCACGGGAAGTGTCAAGAGTCCG---TCGTCCACTTCGGAGTGTGAAGTGGTATCTAGAATTGATGAGATGGTGACCGAT------GAATACCTTCAGCTGGTGAACATGTAC---AGTGGGAAATCC---TCG------ACGGGCGTTGGGAAAGAGAGGAAAGCTAGACAA---GCGCGCAAACCTACATTCAATCCTCTTTCCAAAGAATCCAGGGCGAAG Aconitum_napellus AGGCTGTCTTTTGATATCGCCCGTAGGTTCTTTAGGGTTCAAGACATGCTTGGGTTTGATAAAGCTAGCAAA---ACCGTGGAATGGCTGTTGATAAAGTCCATGGCTGCCATCAATGAGCTCTCTAGTAGT---GTGTCC---CAGCCGAAACTCAGCTTCACAGGTAGCGTCAAGAGTCCG---TCGTCCACTTCGGAGTGTGAAGTGGTATCTAGAATCGATGAGGTGGGGACCGAT------GAATATCTTCAGCTGGTGAACATATCC---AATGGGAAATCC---TCG------ACGGGCGTTGGGAAAGAGAGGAAAGCTAGACAA---ACCCGTAAAGCTACATTCAATCCACTTTCCAAAGAATCCAGGGCGAAG Actaea_cordifolia AGACTGTCACTCGATATTGCCCGTAGGTTCTTTAAGGTTCAAGACATGCTTGGCTATGATAAAGCTAGCAAA---ACGGTTGAATGGCTCTTAACAAAGGCGAAAGAGGCCATCAATGAGCTTTCTAGAAGT---TTCGCC---CAGTCGAAGCTTAGCTGCACTGGAAGTGACAACAGTGGG---TCATCTATTTCGGAGTGTGAAGTAGTATCTGGGATTGATGAAATGGCCACTGAT------GAATATCTTCAGCAAGTAGACACATCT---AGTGGAAAATCA---TCG------CTGGACATTGCCAAAGAAAAAAGAACTAGGAAA---ACGCGCAAAGCTACATTCAATCCCCTGGCGAAAGATTCTAGGGCAAAA Actaea_racemosa AGACTGTCACTCGATATTGCCCGTAGGTTCTTTAAGGTTCAAGACATGCTTGGCTATGATAAAGCTAGCAAA---ACGGTTGAATGGCTCTTAACAAAGGCGAAAGAGGCCATCAATGAGCTTTCTAGAAGT---TTCGCC---CAGTCGAAGCTTAGCTGCACTGGAAGTGACAACAGTGGG---TCATCTATTTCGGAGTGTGAAGTAGTATCTGGGATTGATGAAATGGCCACTGAT------GAATATCTTCAGCAAGTAGACACATCT---AGTGGAAAATCA---TCG------CTGGACATTGCCAAGGAAAAAAGAACTCGGCAA---ACGCGCAAAGCTACATTCAATCCCCTGGCGAAAGATTCTAGGGCAAAA Actaea_simplex AGACTGTCACTCGATATTGCCCGTAGGTTCTTTAAGGTTCAAGACATGCTTGGCTATGATAAAGCTAGCAAA---ACGGTTGAATGGCTCTTAACAAAGGCGAAAGAGGCCATCAATGAGCTTTCTAGAAGT---TTTGCC---CAGTCGAAGATTAGCAGCACTGGAAGTGACAACAGTGGG---TCATCTATTTCAGAGTGTGAAGTAGTATCTGGGATTGATGAAATGGCCACTGAT------GAATATCTTCAGCAAGTAGACACATCT---AGTGGAAAATCA---TCA------CTGGACATTTCCAAAGAAAAAAGAACTAGGCAA---ACGCGCAAAGCTACATTCAATCCCCTGGCGAAAGATGCTAGGGCAAAA Adonis_vernalis AGACTGTCGCTTGATATTGCGCGTAGGTTCTTTATGGTTCAAGACATGCTTGGTTTTGATAAAGCTAGTAAA---ACTGTGGAATGGTTGTTAACAAAGTCGAAGGCAGCAATCATAGAGCTCTCAAGGATT---GCATCA---CAGTCGAAGGTGAGCTGCACTGGGAGTGTCAAAAGTGTA---TCGTCTGCTTCGGAGTGTGAGGTGGTATCTGGGATTGATGAAATGACTACTGAT------GAGCATCTACAACAAGTGAGTATATCC---AATGGGAAACCA---TCT------CCGGGGGATGGAAAAGAGAGAAGAAGTAGACAA---ACGCGTAAAGCTACATTCAATCCCCTTGCAAAGGAATCTAGGGCAAAG Anemone_bracteata AGATTGTCGCTCGACATTGCCCGTAGATTTTTCATGGTTCAGGACATGCTTGGTTTTAATAAAGCTAGCAAA---ACCGTTGAGTGGCTTTTGGTACGGTCAAAGACGGCAATCAAAGAGCTTTCTGCAGGT---GTAGCT---CACTCAAAGGTAAGCTGTGCCGGAAGTGTTAAAAGTGTG---TCATTTTCTTCAGAATGTGAAGTGTTATCTGGGTATGATGAAATGGCTACGGAT------GAA------------GTGAACGTTTCC---GGTGGAGATCCGGCCTCA------ACAGGTATTTGCAAGGAGAAAAGAATTAGGAAA---TGTCGTACAGCTGCAATTAATCCCCTTGCTAAGGAATCCAGGACAAAA Anemone_hepatica AGACTGTCGCTCGACATTGCCCGTAGATTCTTCTTGGTTCAGGACATGCTTGGTTTTGATAAAGCTAGCAAA---ACTGTTGAGTGGCTTTTGGTACAGTCAAAAGTGGCAATCAAAGAGCTCGTTGCTGGT---GTCTCT---CAATCAAAGCTTAGCTGCACTGGAAGTGTCAAGAGTGTG---TCATCTTCTTCGGAATGTGAGGTGTTATCTGGGTATGATGAAATGGCAGCGGGT------GAATATCTTCAGCAAGAGAACATATCC---GGTGGAAACCCC---TCG------TCCGGTATTTCCAAGGAGAAAAGAATTAAAAAA---ACTCGTAAAGCTGCACTTAATCCCGTTGCCAAGGAATCCAGGAAAGTG Anemone_nemorosa AGATTGTCGCTTGACATTGCCCGTAGATTCTTCATGGTTCAAGACATGCTTGGTTTTGATAAAGCTAGCAAA---ACTGTTGAGTGGCTTTTGGTACAATCAAAAGCCGCAATTAAAGAGCTCTCATCAGAT---GTGTCT---CAATCAAAGGTCAGCAGCGCCGGTAGTGTCAAAAGTGTG---TCATCTTCTTCAGAATGTGAAGTCGTATCCGGGAATGACGAAATGGCAACAGAT------GAA------------GTGAACATCTCC---GGTGGAGACCCGGCCTCT------TCCAGAATTTGCAAGGAGAAGAGAGCTAGGAAA---AGCCGTAAAGCTGCACTTAATCCCCTTGCTAAGGAATCTAGGACAATA Anemone_pulsatilla AGATTATCGCTTGACATTGCCCGTAGATTCTTCATGGTTCAGGACATGCTTGGGTTTGATAAAGCTAGCAAA---ACGGTTGAGTGGCTTTTGGTTCAGTCAAAGACTGCAATCAGCGAGCCCTCTGCAGGT---GTGGCT---CAATCA------------------------AAAAGTGTG---TCATCTTCTTCAGAATGCGAAGTGATATCAGGGAATGTTGAAATGGCTGCAGAT------GAA------------GTGAACATCTCCTCCGGTGGGGACCCGTCCTCA------TCCGGTATGTCCAAGGAGAAAAGAATTAGGAAA---AGCCGGAAAGCGACACTCAACCCCATTGCTAAGGAGTCCAGGACAAAA Aquilegia_atrata AGGCTCTCACTCGATATTGCCCGCAGGTTCTTTATGGTTCAAGACATGCTTGGTTTTGATAAAGCTAGTAAA---ACAGTCGAATGGCTACTAACAAAGTCAAAGGAAGCAATCAAGGAGCTGTCTAGAAGT---GTATCCCATCACTCAAAGCTTAGCTGCACCGGAAGTGTGAAGAGTGTA---TCATCTGCTTCTGAGTGTGAAGTGGTATCTGGGATTGAT------ACCACTGAT------GAATATCTTCAGCAAGTGAACATGTCC---AGTGAGAAATCC---TCA------GGAGGCGTAGTAAAAGAACGAAGAACTAAACAA---ACACGTAAAGCTACATTCAATCCCCTTGCAAAAGAATCAAGGGCAAAG Aquilegia_chrysantha AGGCTCTCACTCGATATTGCCCGCAGGTTCTTTATGGTTCAAGACATGCTTGGTTTTGATAAAGCTAGTAAA---ACAGTCGAATGGCTACTAACAAAGTCAAAGGAAGCAATCAAGGAGCTGTCTAGAAGT---GTATCCCATCAGTCAAAGCTTAGCTGCACCGGAAGTGTGAAGAGTGTA---TCATCTGCTTCTGAGTGTGAAGTGGTATCTGGGATTGATTACATGACCACTGAT------GAATATCTTCAGCAAGTGAACATGTCT---AGTGAGAAATCC---TCA------GGAGGCGTAGTAAAAGAACGAAGAACTAAACAA---ACACGTAAAGCTACATTCAATCCCCTTGCAAAAGAATCCAGGGCAAAG Aquilegia_ecalcarata AGGCTCTCACTCGATATTGCCCGCAGGTTCTTTATGGTTCAAGACATGCTTGGTTTTGATAAAGCTAGTAAA---ACAGTCGAATGGCTACTAACAAAGTCAAAGGAAGCAATCAAGGAGCTGTCTAGAAGT---GTATCCCATCAGTCAAAGCTTAGCTGCACCGGAAGTGTGAAGAGTGTA---TCATCTGCTTCTGAGTGTGAAGTGGTATCTGGGATTGATTACATGACCACTGAT------GAATATCTTCAGCAAGTGAACATGTCC---AGTGAGAAATCC---TCA------GGAGGCGTAGTAAAAGAACGAAGAACTAAACAA---ACACGTAAAGCTACATTCAACCCCCTTGCAAAAGAATCAAGGGCAAAG Asteropyrum_cavaleriei AGACTGTCCCTCGACATTGCCCGTAGGTTCTTTATGGTTCAAGACATGCTTGGTTTCGACAAAGCTAGCAAA---ACAGTCGAATGGCTGTTAATCAAGTCCAATGCCGCGATCAATGAGCTCTCTAGGAGT---GTGTCC---AAGTCGAAGCTAAGCTACACCGGAAGTTTGAAGAGTGTG---TCCTCTACTTCGGAATGTGAAGTAGTATCTGGGACTGATGAGATGGCTACGGAT------GAATACTCTCAGCACGCGAGCATATCCTGCAGTGGGAACCCC---TCT------CCCGGCATTGTCAAAGAGAGACGGACTAGACAA---ACGCGTAAAGCTACATTCAATCCACTTGCAAAGGAATCTAGGGCAAAG Callianthemum_anemonoides AGACTGTCCCTCGACATTGCCCGTAGGTTCTTTATGGTTCAAGACATGCTTGGTTTCGACAAAGCTAGCAAA---ACAGTCGAATGGCTGTTAATCAAGTCCAATGCCGCGATCAATGAGCTCTCTAGGAGT---GTGTCC---AAGTCGAAGCTAAGCTACACCGGAAGTCTGAAGAGTGTG---TCCTCTACTTCGGAATGTGAAGTAGTATCTGGGACTGATGAGATGGCTACGGAT------GAATACTCTCAGCACGCGAGCATATCCTGCAGTGGGAACCCC---TCT------CCCGGCATTGTCAAAGAGAGACGGACTAGACAA---ACGCGTAAGGCTACATTTAATCCCCTTGCAAAGGAATCTAGGGCAAAG Caltha_leptosepala AGACTCTCCCTAGACATTGCTAGGAGGTTTTTCATGGTTCAAGATATGCTTGGTTATGATAAAGCTAGCAAA---ACAGTTGAATGGTTGTTAGGGCAGTCTAAAATGGCCATCAAAGAGTTGTCTAGAAGT---GTGTCA---AAGTCCAAGATTAGTTGCAGTGGAAGTGTGAAGAGTGTG---TCATCAACTTCGGAATGCGAAGTAGTCTCTGGGGTGGAAGAAATGGAGCAAAAG------------------------------TCC---------------------------------TGCAAATTAGAGAGAAGGGCAAGACAG---ACGCGTAAAGCTACATTCAATCCTCTTGCTAAAGAGTCTAGGGCAAAA Ceratocephala_falcata AGGCTATCACTTGATATTGCGAGACGATTCTTCATGGTTCAAGATATGCTTGGGTTTGATAAAGCAAGCAAG---ACGGTTGAATGGCTTCTAACAAAGTCCAAAGAAGCAATCAAGGAGCTTACAAATTCT------------CAACCAAAGGTTAGCTGCACA---------AGCACTGTC---TCCTCTACTTCTGAATGTGAAGTAGTTTCTGAATTTGCC------------------------------GAAAAAAAAAATATTGCTTCAAATGGAAAGCCG---TTG------TTGGAGGTAACTAAAGAGAGGCGCACTAGACAA---ATTCGTAAAGCTACATTTAATCCACTGGCGAAAGAGTCAAGGACAAAG Clematis_apiifolia AGATTGTCGCTAGACATTGGCCGTAGGTCCTTTAAGGTTCAGGACATGCTCGGCTTTGATAAAGGTAGCAAA---GCTGTAGAATGGCTCCTGGTGCGGTCGGAAGCAGCAATCAATAAGCTCTATGCAGGT---GTGTCA---CAATCA------AATTGCACCGGAAGTGTAAAGAGCGTG---TCGTCTACTTCGGAATGTGAAGTGGTATCTGGGTACGACGAAATGGCTACAGAT------GAATATCTTCAGCAAGTGAACATCTCC---GGTGAAAACCCC---TCA------TCCGGTATATCCAAGGAGAAAAGAACTAAGAAA---TCTCGTAAAGCTGCAGTTAATCCACTTGCCAAGGAATCCAGGAAAATA Consolida_regalis AGGCTGTCTTATGATATCGCCGTTAAGTTCTTTAAGCTTCAGGATATTCTTGGCTTTGACAAAGCCAGCAAA---ACTGTTGGATGGCTGTTGAAAAAGTCCCAGGACGCCATCGATGAGCTCACTAGTAGC---GTGTCC---CAGCCGAAGCTCAGCTGCACAGGATGTATCAAGAGCTTG---TCATCTGCTTCAGATTCTGAAGTGATATCTACAACTGATGAGATGCCTACTGAT------GAT---CCTCAGCAAGTGAACACATCC---AATGGGAGATCC---TCATCCTCGCCGGGCATTGGGAAAGAGAGGAAAGCTAGGCAA---ACGCGCAAAGCTACATTCTATCCCCTTTCCAAAGAATCCAGGGAGAAG Coptis_quinquefolia AGACTGTCACTCGATATTGCTCGTAGGTTTTTTGCTCTTCAAGATATGCTTCGTTTTGATAAAGCGAGCAAA---ACGGTTGAATGGCTGCTAACAAAGTCGAAGGCAGCAATCAAGGAGCTCTCAAAAATT---GTGTAC---GAGGAAAAGCTTAGTAGCATTGGTAGTGTCAAGAGTGCA---TCGTCTGCTTCCGAGTGTGAAGTAGTATCCGGAATTGATGAGATGGTCAACAAT------GAAAATCTAGAGCAAGTGAACATCTCC---AGTGGAGGACCC---TTG------TCCAGCATTTCCAAAGAAAAAAGAACTAGACAA---ACACGAAAAGCTACATTTCATCCCCTTGCGAAGGAATCTAGGGCAAAG Delphinium_cheilanthum AGGCTGTGTTATGATATCGCCATTAAGTTCTTCAAGCTTCAAGATATGCTTGGCTTTGACAAAGCTAGCAAA---ACTGTTGGATGGCTGTTGACAAAATCCCAGGCAGCCATCAATGAGCTCACT---AGT---ATGTCC---CAGCCAAAACTCAGCTGCACAGGAAGTTTCAAGAGTGTG---TCGTCTACTTCTGAGTGCGATGTGGTATCTATAGTTGATGAGATGCCTACTGAT------GAC---ACTCAGCAAGTGAACATATCC---AGCGGTAGATCC---TCG------CCGGGCATTGGGAAAGAGAGGAAAGCTAGACAA---ACACGCAAAGCTACATTCTATCCTCTTTCGAAAGAATCCAGGGAGAAG Delphinium_pictum AGGCTGTCTTTTGATATCGCGCGTAGGTTCTTTATGGTTCAAGATATGCTTGGCTTTGATAAAGCTAGTAAA---ACTGTGGAATGGCTTTTGACAAAGTCGAAGGAGGCCATCAGTGAGCTGTCCGGTAAT---GTGTCC---CAGCGGAAAAGCAGCTGCACGGGAAGTGTCAAGAGCTTG---TCGTCTACTTCAGAGTGTGAAGTGGTATCTAGAATCGAAGAGATGACCACCGAT------GATTATCTGCAGCAAGTGAATATATCA---AGTGGGAGATCC---TCG------CCGTGCATTGGGAAAGAGAGGAAAGCTAGACAA---ACGCGTAAAGCTACATTTAATCCCCTAGCCAAAGAATCGAGGGAGAAG Dichocarpum_stoloniferum AGGCTCTCACTTGATATTGCCCGCAGATTCTTTATGGTTCAAGACATGCTTGGTTTTGATAAAGCTAGTAAA---ACGGTGGAATGGCTACTAACAAAGTCGAAGGAACCAATCAAGGATCTGTCTAGAAGT---GTATCC---CTGTCAAAGCTTAGCTGCACCGGAAGTGTGAAGAGTGTG---TCATCTGCTTCGGAGTGTGAAGTGGTATCTGGGAATGATTACATTAGCACTGAT------GAATATCTTCATCAAGTGAACATCGCT---AGTGGGAAATCG---GCCTTAGGAAGCAGCCTAGTAAAAGAAGGAAGAACTAAACAA---ACACGTAAAGCTACATTCAACCCCCTTGCAAAAGAATCAAGGGCAAAG Eranthis_cilicica AGACTGTCACTCGATATTGCCCGTAGGTTCTTTAAGATTCAAGACATGCTTGGCTTTGATAAAGCTAGCAAA---ACGGTGGAATGGCTCTTAACAAAGGCGAAAACAGCAATAAATGAGCTCTCTACAAAT---CTCGCA---CCCTCGAAGCTTAGCTGCACGGTAAGTGACAACAGTGGG---TCATCTATTTCGGAATGTGAAGTAGTATCTGGGATTGATGAGATGGCCACTGAT------GAT---CTTCAGAAAGTAGAGACATCC---ACTGGAAAATCA---TCG------CCGGATATTGCCAAAGAAAAAAGAACTAGACAA---ACACGCAAAGCTGCATTCAATCCCCTGGCGAAAGAATCTAGGGCAAAG Eranthis_hyemalis AGACTGTCACTCGATATTGCCCGTAGGTTCTTTAAGATTCAAGACATGCTTGGCTTTGATAAAGCTAGCAAA---ACGGTGGAATGGCTCTTAACAAAGGCGAAAACAGCAATAAATGAGCTCTCTACAAAT---CTCGCA---CCCTCGAAGCTTAGCTGCACGGTAAGTGACAACAGTGGG---TCATCTATTTCGGAATGTGAAGTAGTATCTGGGATTGATGAGATGGCCACTGAT------GAT---CTTCAGAAAGTAGAGACATCC---ACTGGAAAATCA---TCG------CCGGATATTGCCAAAGAAAAAAGAACTAGACAA---ACACGCAAAGCTGCATTCAATCCCCTGGCGAAAGAATCTAGGGCAAAG Ficaria_verna AGATTATCGCTTGATATAGCTAGACGATTCTTCATGGTTCAAGATATGCTTGGTTTCGACAAAGCTAGCAAG---ACGGTTGAATGGCTTCTGACACAGTCGACAGGTGCAATCAAGGAGCTCGCTGTCAAC---ATTTCT---CAATCAAAGCTTAGCTGCACG---------ACGAGTGTG---TCGTCTTTGTCCGAATGTGAAGTAGTATCCGGATTCGAC---------GCCGAT---------------GAGAAAGTGGACATCTCC---AATGGACACCCC---TCG------TCCGATGTGACCAAGGAAAGAAGGACTAGGCAA---ACTCGGAAAGCTACATTTAATCCCCTGGCAAAGGAATCAAGGACAAAG Glaucidium_palmatum AGACTTTCTCTTGACATTGCTCGAAAGTTCTTTAATCTTCAAGACATGCTAGGGTATGATAAGGCCAGCAAG---ACGGTCGAGTGGCTGTTAATAAAGGCAAAGATGCCGATCAAGGAGCTCTGTAGAGGAATGTTGTCC---CAAGCGAAGCTTAGCTGCAGTGGAAGTGCCAAGAGTGTG---TCGTCTACTTCGGAGTGCGAGGTGGTATCTGGGATGGATGAGATTGCTAATAATA---CTGAAGATCATCAGCAAGAAAAGATTTCG---AATGGAAAACCTTCTGGG------GAGGGGATTACCAAAAAGAAAAGAAGTCGACAAACAACACGTAAAGCTACATTTCATCCCCTTGCAAAGGAGTCTAGGGAAAAG Hydrastis_canadensis AGACTTTCGCTTGATATTGCGCGGAGATTCTTCACCGTTCAAGACATGCTTGGTTTTGATAAAGCTAGCAAA---ACGGTTGATTGGCTGTTAACACAGTCGAAAGAAGCAATCAAGGAGCTATCTAGTGGT---GTTTCA---ATAGCCAAGTCTAGTTGCAGTGGGAGTGTGAAGAGTGTG---TCTTCAACATCTGAGTGTGAAGTAGTATCTGGAATCGATGAGATTGCTAACGAC------GATGATCATCAGAAAGTGAACATCTCT---AATGGAAAATCA---TTA------GGGGGAAGTGCTAAAGTGAAAAAAACCAGAAAA---TCGCGTCAAGCTACATTTCATCCCTTTACAAAAGAATCTAGGGCAAAG Isopyrum_thalictroides AGGCTCTCGCTCGATATTGCCCGCAGGTTTTTTATGGTTCAAGACATGCTTGGGTTTGACAAAGCTAGTAAA---ACGGTGGAATGGCTGCTAACAAAGTCGAAGGAACCAATCAAGGAGCTGTCTAGAAGT---GTATCC---CAGTCAAAGCTTAGCTGCACCAGAAGTGTTAAGAGTGTATTATCATCTGCTTCGGAGTGTGAAGTGGTATCTGGGATTGATTTCATGGCCACTGAT------GAATATCTTCACCAAGTGAACATCTCT---AGTGGGAAATCC---TTA------GGAGGCCTAGTAAAAGAACGAAGAACTAAACAA---ACACGTAAAGCTACATTCAACCCCCTTGCAAAAGAATCAAGGGCAAAG Nigella_damascena AGGCTTTCACTTCCTATTGCGCGTAAGTTCTTTATGGTTCAAGACATGCTTGGTTACGACAAAGCAAGCAAG---ACGGTTGAATGGCTGCTGACCAAGTCGAAAGAGGCTATCAATGAGCTCTCCAGAAGT---GTGTCT---CACTCCAAGTTTAGCTACACTGGAAGTGTCAAGAGTGGC---TCATCTATTTCCGAGTGTGAAGAGGTGTCTGCTTTAGATGAAATAGCTACTAAC------AACACATCCAGTACGGTGAATTCC---------------------CAA------TCGGGTGTTGCCAAGGAGAGAAGAATTAGACAA---ACGCGTAAAGCTGCATTCAATCCTCTTGCCAAGGAGTCTAGGGCAAAA Nigella_sativa AGGCTTTCACTTCCTATTGCGCGTAAGTTCTTTATGGTTCAAGACATGCTTGGTTACGACAAAGCAAGCAAG---ACGGTTGAATGGCTGCTGACCAAGTCGAAAGAGGCTATCAATGAGCTCTCCAGAAGT---GTGTCT---CACTCCAAGTTTAGCTACACTGGAAGTGTCAAGAGTGGC---TCATCTATTTCCGAGTGTGAAGAGGTGTCTGCTTTAGATGAAATAGCTACTAAC------AACACATCCAGTACGGTGAATTCC---------------------CAA------TCGGGTGTTGCCAAGGAGAGAAGAATTAGACAA---ACGCGTAAAGCTGCATTCAATCCTCTTGCCAAGGAATCTAGGGCAAAA Paraquilegia_anemonoides AGGCTCTCACTTGATATTGCCCGCAGGTTCTTTATGGTTCAAGACATGCTTGGTTTTGATAAAGCTAGTAAA---ACGGTGGAATGGCTACTAACAAAGTCGAAGGAAGCAATCAAGGAGCTGTCTAGAAGT---GTATCC---CAGTCAAAGCTTAGCTGCACCGGAAGTCTGAAGAGTGTA---TCATCTGCTTCGGAGTGTGAAGTGGTACCTGGAATTGATTACATGACCACTGAT------GAATATCTTCATCAAGTGAACATCTCT---AGTGGGAAATCC---TTA------GGAGGCCTAGTAAAAGAACAAAGAACCAAACAA---ACACGTAGAGCTACATTCAACCCCCTTGCAAAAGAATCAAGGGCAAAG Ranunculus_repens AGATTATCGCTCGATATTGCTAGAAGGTTTTTCATGGTTCAAGATATGCTTGGTTTCGATAAAGCTAGTAAG---ACGGTTGAATGGCTTCTGACACAGTCGAAGAATGCAATCAAGGAGCTCTCTAACAAT---ATTTCT---CAATCAAAGACTAGCTGCACGACGAGTGTC---ACTCTC---TCCTCTACTTCAGAATGTGAAGTAGTATCTGGATTTCATGGAATGGCAACTGAC------GAGGATCTTCGAAAAGGTATTCTTTCC---AATGGAAACCCC---TTG------TCCGAATCAACTAAGGAAAGAAGGACTAGGCAA---ACTCGGAAATCTACATTTAATCCCCTCGCAAAGGAATCTAGGACAAAG Semiaquilegia_adoxoides AGGCTCTCACTCGATATTGCCCGCAGGTTCTTTATGGTTCAAGACATGCTTGGTTTTGATAAAGCTAGTAAA---ACAGTCGAATGGCTACTAACAAAGTCAAAGGAAGCAATCAAGGAGCTGTCTAGAAGT---GTATCCCATCAGTCAAAGCTTAGCTGCACCGGAAGTGTGAAGAGTGTA---TCATCTGCTCCTGAGTGTGAAGTGGTATCTGGGATTGATTACATGACCACTGAT------GAATATCTTCAGCAAGTGAACATGTCC---AGTGAGAAATCC---TCA------GGAGGCGTAGTAAAAGAACGAAGAACTAAACAA---ACACGTAAAGCTACATTCAACCCCCTTGCAAAAGAATCAAGGGCAAAG Thalictrum_aquilegiifolium AGGCTCTCGCTCGATATTGCTCGCAGGTTCTTTATGGTTCAAGACATGCTTGGTTTTGACAAAGCTAGTAAA---ACGGTGGAATGGCTACTAACAAAGTCCAAGGAAGCAATTAAGGTGCTGTCTAGTAGT---GTATCC---CAGTCAAAGCTTAGCAGCACCGGAAGTGTGAAGAGTGTA---TCATCTGCTTCCGAGTGCGACGTCGTATCTGGGATTGATTACATGACCACTGAT------GAATGTGTTCATCAAGTGAACATCTCT---AGTGGGAAATCC---TTA------GGTGGCCTAGTAAAAGAGCGAAGAACTAAACAA---ACACGTAAAGCTACATTCAACCCCATTGCAAAAGAATCAAGGGCCATG Thalictrum_minus AGGCTCTCACTCGATATTGCCCGCAGGTTCTTTATGGTTCAAGACATGCTTGGTTTTGACAAAGCTAGTAAA---ACGGTGGAATGGCTACTAACAAAGTCCAAGGAAGCAATTAAGGAGCTGTCTAGAAGT---GTATCC---CAGTCAAAGCTTAGCTGCACAGGAAGTGCGAAGAGTGTA---TCATCTGCTTCCGAGTGTGACGTGGTATCTGGGATTGATTACATGACCACTGAT------GAATATGTTCATCAAGTAAACATCTCT---AGTGGGAAATCC---TTC------GGTGGCCTAGTAAAAGAACGAAGAACTAAACAA---ACACGTAAAACTACATTCAACCCCATTGCAAAAGAATCAAGGGCAAAG Trautvetteria_carolinensis AGATTATCGCTGGATATTGCTAGACGATTCTTCATGGTTCAAGATATGCTTGGTTTCGACAAAGCTAGCAAG---ACAGTTGAATGGCTTTTGATACAGTCCAAAGGCGCAATCAAAGAGCTCTCTAACAAC---ATTTCT---CAGTCCAAGCTTAGCAGCACGACCAGTGCCAAGAGTGTG---TCGTCTACTTCGGAATGTGAAGTAGTATCTGGGTTTGATGAAATGGCGACTGAT------GAAGATCTTCAGAAAGTTATCATTTCC---AATGGAAACCCC------------------TCAAGTAAGCAAAGAAGGACTAGACAA---ATTCGGAAAGCTACATTCAATCCCCTCGCAAAGGAATCAAGGACAAAG Xanthorhiza_simplicissima AGACTGTCACTCGATATTGCTCGTAGGTTTTTTGCTCTTCAAGATATGCTTGGTTTTGATAAAGCAAGCAAA---ACGGTTGAATGGCTGCTAACAAAATCAAAGGCAGCAATCAAGGAGCTCTCAAAAATT---GTGTAC---GAGGCAAAGCTTAGTAGAATTGGTAGTGTCAAGAGTGCA---TTGTCTACTTCCGAGGGTGAAGTAGTATCTGGAATTGATGAGATGGTCAGCAAT------GAAGATTTAGAGCAACTGAACATCTCC---AGTGGAAGACCC---TCA------TCCAGCATTTCCAAAGAAAAAAAAACTAGACAA---ACACGAAAAGTAACATTTCATCCCCTTGCGAAGGAATCTAGGGCAAAA ; END; [ The following blocks are output data for analysis step 17580 ] BEGIN TREES; TITLE Ranunculaceae_CYC1; LINK TAXA = TaxaForAnalysisStep17580; TREE con_50_majrule = [&R] (Glaucidium_palmatum:8.0,(Hydrastis_canadensis:7.0,((Coptis_quinquefolia:1.0,Xanthorhiza_simplicissima:1.0):5.0,(Aconitum_anthora:5.0,Adonis_vernalis:5.0,(Nigella_damascena:1.0,Nigella_sativa:1.0):4.0,(Caltha_leptosepala:2.0,(Asteropyrum_cavaleriei:1.0,Callianthemum_anemonoides:1.0):1.0):3.0,((Aconitum_lycoctonum:1.0,Aconitum_napellus:1.0):2.0,(Delphinium_pictum:2.0,(Consolida_regalis:1.0,Delphinium_cheilanthum:1.0):1.0):1.0):2.0,((Eranthis_cilicica:1.0,Eranthis_hyemalis:1.0):1.0,(Actaea_cordifolia:1.0,Actaea_racemosa:1.0,Actaea_simplex:1.0):1.0):3.0,((Ficaria_verna:2.0,Trautvetteria_carolinensis:2.0,(Ceratocephala_falcata:1.0,Ranunculus_repens:1.0):1.0):2.0,(Anemone_hepatica:3.0,Clematis_apiifolia:3.0,(Anemone_nemorosa:2.0,(Anemone_bracteata:1.0,Anemone_pulsatilla:1.0):1.0):1.0):1.0):1.0,((Aquilegia_ecalcarata:2.0,Semiaquilegia_adoxoides:2.0,(Aquilegia_atrata:1.0,Aquilegia_chrysantha:1.0):1.0):1.0,(Dichocarpum_stoloniferum:2.0,Isopyrum_thalictroides:2.0,Paraquilegia_anemonoides:2.0,(Thalictrum_aquilegiifolium:1.0,Thalictrum_minus:1.0):1.0):1.0):2.0):1.0):1.0):1.0); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr92892] END;