#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on November 09, 2025; 8:03 GMT TreeBASE (cc) 1994-2008 Study reference: Barbosa R.N., Bezerra J.D., Boekhout T., Silva G.A., Souza-motta C.M., & Oliveira N.T. 2016. Blastobotrys meliponae. Persoonia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S19060] [ The following blocks are input data for analysis step 18059 ] BEGIN TAXA; TITLE TaxaForAnalysisStep18059; DIMENSIONS NTAX=30; TAXLABELS Blastobotrys_adeninivorans_DQ442697_T Blastobotrys_aff_inosifermentans_DQ442698_T Blastobotrys_americana_DQ442699_T Blastobotrys_arbuscula_DQ442689_T Blastobotrys_aristata_U40109 Blastobotrys_attinorum_AY442294 Blastobotrys_attinorum_GU373758 Blastobotrys_capitulata_U40104 Blastobotrys_chiropterorum_DQ442682_T Blastobotrys_elegans_U40095 Blastobotrys_illinoisensis_DQ442696_T Blastobotrys_indianensis_DQ442692_T Blastobotrys_malaysiensis_DQ442695_T Blastobotrys_meliponae_URM7224.2 Blastobotrys_meliponae_URM7224.3 Blastobotrys_meliponae_URM7224T Blastobotrys_mokoenaii_DQ442694_T Blastobotrys_muscicola_DQ442680_T Blastobotrys_nivea_U40110 Blastobotrys_parvus_DQ442693 Blastobotrys_peoriensis_DQ442700_T Blastobotrys_proliferans_DQ442684_ Blastobotrys_proliferans_EF584541 Blastobotrys_proliferans_KM056338 Blastobotrys_proliferans_U40098 Blastobotrys_robertii_DQ839395 Blastobotrys_serpentis_AM410668 Blastobotrys_terrestris_DQ442683_T Saccharomyces_cerevisiae_AY048154 Trichomonascus_farinosus_U40132 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M37516] TITLE Blastobotrys_meliponae_D1_D2_LSU_rDNA; LINK TAXA = TaxaForAnalysisStep18059; DIMENSIONS NCHAR=569; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Blastobotrys_adeninivorans_DQ442697_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-ACGGGCGTCCGAGTTGTAATTTGAAGATGGTAACTTTGGGTTTGGCTCTTGCATAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTTCATGGTAAGATG-CCCATTCCTTTGTAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGACTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAGTCAGACTTGGTATT-CAGTG--ATCAACTGTCTTTCGGGACTGTGCACTCGCTGTTTACTGGGCCAACATCGGTTTTGGCGGCGAGATAAATGCATTGGAACGTGGCTCTATCTTC-GGGTGGAGTGTTATAGCCTT-TGTAAATATCGCCAGCTGGGACCGAGGACTGCGC----ATCTG-CTAGGATGTTGGCGTAATGACTTTAAGCCAC Blastobotrys_aff_inosifermentans_DQ442698_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-ACGGGCGTCCGAGTTGTAATTTGAAGATGGCAACTTTGGGTTTGGCTCTTGCATAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTTCATGGTAAGATG-CCCATTCCTTTGTAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGACTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAGTCAGACTTTGTATT-CAGTG--ATCAACTGTCTTTCGGGACTGTGCACTCGCTGTTTACTGGGCCAACATCGGTTTTGGCGGCGAGATAAATGCATTGGAACGTGGCTCTATCTTC-GGATGGAGTGTTATAGCCTT-TGTAAATATCGCCTGCTGGGACCGAGGACTGCGC----ATCTG-CTAGGATGTTGGCGTAATGACTTTAAGCCAC Blastobotrys_americana_DQ442699_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-ACGGGCGTCCGAGTTGTAATTTGAAGATGGTAACTTTGGGTTTGGCTCTCGCATAAGTTCCTTGGAACAGGGCGTCATAGAGGGTGAGAATCCCGTTCATGGTGAGATG-CCCATTCCTATATAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGACTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAGTCAGACTTGGTATT-CAGTG--ATCAACTGTCTCTTGGGACTGTGCACTCGCTGTTTACTGGGCCAACATCAGTTTTGGCGGCAAGATAAAGGTTTGGGAATGTGACTCTT-C----G----GAGTGTTATAGCCCT-TTCTAATATTGCCAGCTGGGACTGAGGTCTGCGCA--TTTTTG-CTAGGATGTTGGCGTAATGACTTTAAGCCAC Blastobotrys_arbuscula_DQ442689_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAAGCTAGCGTCTTT-TTAGGCGTTCGCATTGTAATTTGAAGATGGCAACTTTGGTGGCGGCTCTTGCACATGTTCCTTGGAACAGGACATCATAGAGGGTGAGAATCCCGTACATGGTGAGAGT-ACCGTCGCTTTGTAAAGTGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGTCTTGGCTTG-TAGTG--ATCAACTGTCTTTCGGGACTGTGCACTCGCTACTTGCTGGGTCAGCATCAGTTTTGGTGGTAGGATAAGAACAATTGAATGTGGCTTTC-CTTC-GGGG-AAGTGTTATAGCTTT-TGTTGATACTGCCAACCGGGACTGAGGACCGCGC---TTCGTG-CTAGGATGCTGGCGTAATGATCTTAAGCCAC Blastobotrys_aristata_U40109 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAAGCTAGCGTCTTT-TTAGGCGTTCGCGTTGTAATTTGAAGATGGCAACTTTGGCAGCGGCCTTTGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTACATGGCGAGGGT-ACCGCTGCTTTGTAAAGTGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGTCTTGGTTTT-TAGTG--ATCAACTGTCCTTCGGGACTGTGCACTCGCTATTTACTAGGCCAGCATCAGTTTTGGTGGCGGGATAATAGCAGCGGGATGTGACTTTG-CTTC-GGTA-AAGTGTTATAACCGCGTGCTGATGCCGCCTACCGAGACTGAGGACCGCGT---CTTTGA-CTAGGATGCTGGCGTAATGATCTTAAGCCAC Blastobotrys_attinorum_AY442294 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TTAGACGTCCGAGTTGTAATTTGAAGAAGGTAACTTTGGAGACGGCCCTTGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTACATGGCGAGGTG-TCCGTTTCTTTGTAAAGTGCTTTCCAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGGTTTG-TAGTG--ATCAACTGTCTCTCGGGACTGTGCACTCGCTACTTACTAGGCCAACATCGGTTTTGGCGGTGGGATAATGACAGTTGAATGTGGCTCCG-CTTC-GG-TGGAGTGTTATAGCTTT-TGTTGATACCACCAGCCGGGACCGAGGACTGCGT---CTTTGA-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_attinorum_GU373758 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTTCTTAGGCGTCCGAGTTGTAATTTGAAGAAGGTAACTTTGGAAACGGCCCTTGTATATGTTCCTTGGAATAGGACGTCACAGAGGGTGAGAACCCCGTATATGGCGAGGTG-TCCGTTTCTATGTAAAGTGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGGTTTG-TAGTG--ATCAGCTGTCTCTTGGGACTGTGCACTCGCTACTTACTAGGCCAACATCAGTTTTGGCGGTGGGATAATGACAGTTGAATGTGGCTCCG-CTTC-GG-TGGAGTGTTATAGCTTT-TGTTGATACCACCAGCCGGGACCGAGGACTGCGT---CTTTGA-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_capitulata_U40104 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAAGCTAGCGTCTTT-TTAGGCGTTCGCATTGTAATTTGAAGATGGCAACTTTGGTGGCGGCTCTTGCACATGTTCCTTGGAACAGGACATCATAGAGGGTGAGAATCCCGTACATGGTGGGAGT-ACCGTTGCTTTGTAAAGTGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGTCTTGGCTTG-TAGTG--ATCAACTGTGTTTCGGCACTGTGCACTCGCTACTTGCTGGGTCAGCATCAGTTTTGGTGGTAGGATAAGAACAGTTGAATGTGGCTTTT-CTTC-GGGA-AAGTGTTATAGCTTC-TGTTGATACTGCCAACCGGGACTGAGGACCGCGC---TTCGTG-CTAGGATGCTGGCGTAATGATCTTAAGCCAC Blastobotrys_chiropterorum_DQ442682_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TTAGGCGTCCGAGTTGTAATTTGAAGATGGCAACTTTGGGATTGGCTCTCGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAACCCCGTTCATGGCGAGATGACCCAATTCTATGTAAAGTGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGGTATT-CAGTG--ATCAACTGTCTCTCGGGACTGTGCACTCGCTGTTTACTGGGCCAACATCGGTTTGGAGGGTGAGATAAAAGCTAGAGAATGTGGCACTG-CTCC-GGTA-GTGTGTTATAGCTCT-GGTCAATATCACCATTCTGGACCGAGGACTGCGC---TTTATG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_elegans_U40095 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAAGCTAGCGTCTTT-ATAGGCGTTCGCGTTGTAATTTGAAGATGGCAACTTTGGCAGCGGCCTTTGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTACATGGCGAGGGT-ACCGCTGCTTTGTAAAGTGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGCTTG-TAGTG--ATCAACTGTCTTTCGGGACTGTGCACTCGCTACTTGCTAGGCCAACATCAGTTTTGGCGGCGGGATAATGGTAGTGGAATGTGACTTTG-CTTC-GGTA-AAGTGTTATAGCCACATGCTGATGCCGTCAGCCGAGACTGAGGACCGCGTACTTTTGTA-CTAGGATGTTGGCGTAATGATCTTAAGCCAC Blastobotrys_illinoisensis_DQ442696_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-ACTGGCGTCCGAGTTGTAATTTCAAGATGGTGTCTTCTGGTTTGGCCCTTGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATATGGTGAGGTGACCATTTCCTTTGTAAAGCGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGCTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATT-CAGTG--ATCAGCTGTCTTTCGGGACTGTGCACTCGCTGTTTACTGGGCCAACATCAGTTTGGATGGCGAGATAATGACAATTGAATGTGGCTCTCTCTTC-GGAGGGAGTGTTATAGCTTT-TGTTGATATCGCCTATCCGGATTGAGGACCGCGC----TTCGG-CTAGGATGTTGGCGTAATGATCTTAAGCCAC Blastobotrys_indianensis_DQ442692_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TTAGACGTCCGAGTTGTAATTTGAAGAAGGTAACTTTGGAGACGGCCTTTGCACATGTTCCTTGGAACAGGACATCATAGAGGGTGAGAATCCCGTACATGGTGAGGGT-CCCAACTCTTTGTAAAGTGCTTTCCAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGGTTTG-TAGTG--ATCAACTGTCTCTTGGGACTGTGCACTCGCTGCTTGCTAGGCCAACATCGGTTTTGGCGGTAAGATAATGGCAGATGAATGTGGCTCATTCGT--G-----AGTGTTATAGCTTCTGGTCGATATTGCCAGCTGGGACCGAGGACTGCGC---TTTATG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_malaysiensis_DQ442695_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TTTGGCGTCCGAGTTGTAATTTCAAGATGGTGTCTCTGGGTTTGGCCCTTGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATATGGTGAGGTGACCATTTCCTTTGTAAAGCGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGCTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATT-CAGTG--ATCAGCTGTCTTTCGGGACTGTGCACTCGCTGTTTACTGGGCCAACATCAGTTTGGATGGCGAGATAATGACAATTGAATGTGGCTCCTTCTTC-GGAGGGAGTGTTATAGCTTT-TGTTGATATCGCCTATCCGGATTGAGGACCGCGC----TTCGG-CTAGGATGTTGGCGTAATGATCTTAAGCCAC Blastobotrys_meliponae_URM7224.2 AGT-ACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCATT-TCTGGCGTCCGAGTTGTAATTTGAAGATGGCAACTTTGGTAGCGGCTCTTGCGTATGTTCCTTGGAATAGGACGTCACAGAGGGTGAGAACCCCGTACGTAGTGAGATC-ACCGCTGCTATGTAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGATTTGTTAGTG--ATCAACTGTCTCTCGGGACTGTGCACTCGCTACTTACTAGGCCAACATCAGTTTTGGCGGTAGGAAAATGGTAAAGGAATGTGGCTCTG-CTTC-GG-TAGAGTGTTATAACCTT-TGCTGATACTACCAGCTGGGACTGAGGACTGCGC---TTTTAG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_meliponae_URM7224.3 AGT-ACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCATT-TCTGGCGTCCGAGTTGTAATTTGAAGATGGCAACTTTGGTAGCGGCTCTTGCGTATGTTCCTTGGAATAGGACGTCACAGAGGGTGAGAACCCCGTACGTAGTGAGATC-ACCGCTGCTATGTAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGATTTGTTAGTG--ATCAACTGTCTCTCGGGACTGTGCACTCGCTACTTACTAGGCCAACATCAGTTTTGGCGGTAGGAAAATGGTAAAGGAATGTGGCTCTG-CTTC-GG-TAGAGTGTTATAACCTT-TGCTGATACTACCAGCTGGGACTGAGGACTGCGC---TTTTAG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_meliponae_URM7224T AGT-ACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCATT-TCTGGCGTCCGAGTTGTAATTTGAAGATGGCAACTTTGGTAGCGGCTCTTGCGTATGTTCCTTGGAATAGGACGTCACAGAGGGTGAGAACCCCGTACGTAGTGAGATC-ACCGCTGCTATGTAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGATTTGTTAGTG--ATCAACTGTCTCTCGGGACTGTGCACTCGCTACTTACTAGGCCAACATCAGTTTTGGCGGTAGGAAAATGGTAAAGGAATGTGGCTCTG-CTTC-GG-TAGAGTGTTATAACCTT-TGCTGATACTACCAGCTGGGACTGAGGACTGCGC---TTTTAG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_mokoenaii_DQ442694_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TTTGGCGTCCGAGTTGTAATTTCAAGATGGTGTCTTCTGGTTTGGCCCTTGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATATGGTGAGGTGTCCATTTCCTTTGTAAAGCGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGCTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATT-CAGTG--ATCAGCTGTCTTTCGGGACTGTGCACTCGCTGTTTACTGGGCCAACATCAGTTTGGATGGCGAGATAATGACAATTGAATGTGGCTCTCTCTTC-GGAGGGAGTGTTATAGCTTT-TGTTGATATCGCCTATCCGGACTGAGGACCGCGC----TTCGG-CTAGGATGTTGGCGTAATGATCTTAAGCCAC Blastobotrys_muscicola_DQ442680_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TTGGGCGTCCGAGTTGTAATTTGAAGAAGGTAACTCTGGGGCTGGCTCTTGCATAAGTTCCTTGGAACGGGACGTCATAGAGGGTGAGAATCCCGTTTATGGTGAGGTG-TCCAGTCCTTTGTAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGGTTTG-CAGTG--GTCAGCTTTCTCTCGGGAAGGCGGTTACGCTGTTTACTGGGCCAACATCGGTTCGGACGGCAGGATAATGACAACTGAATGTGGCTC-G-CCTC-GGT--GAGTGTTATAGCTTT-TGTTGATACTGCCAGCTTGGACCGAGGACTGCGC----TTCGG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_nivea_U40110 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAAGCTAGCGTCTTT-TTTGGCGTTCGCGTTGTAATTTGAAGATGGCAACTTTGGAAACGGCCCTTGCATATGTTCCTTGGAACAGGACATCATAGAGGGTGAGAATCCCGTACATGGTGGGGAG-TCCGTTTCTATGTAAAGTGCTTTCCAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGGCTTG-TAGTG--ATCAACTGTCTTTCGGGACTGTGCACTCGCTACTTGCTAGGCCAACATCAGCTCTGGCGGTGAGATAATAGTAGTGGAATGTGACTTTG-CTTC-GGTA-AAGTGTTATAGCCACATGCTGATGTCGCCAGCCGGGGCTGAGGACCGCGC---TTTTAG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_parvus_DQ442693 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TTAGACGTCCGAGTTGTAATTTGAAGAAGGTAACTTTGGAGACGGCCCTTGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTACATGGCGAGGTG-TCCGTTTCTTTGTAAAGTGCTTTCCAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGGTTTG-TAGTG--ATCAACTGTCTCTCGGGACTGTGCACTCGCTGCTTACTAGGCCAACATCGGTTTTGGCGGTGGGATAATGACAATTGAATGTGGCTCTA-CTTC-GGTG-GAGTGTTATAGCTTT-TGTTGATACCACCAGCCGGGACCGAGGTCTGCGCA--TTTTTG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_peoriensis_DQ442700_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-ACGGGCGTCCGAGTTGTAATTTGAAGATGGTAACTTTGGGTTTGGCTCTCGCATAAGTTCCTTGGAACAGGGCGTCATAGAGGGTGAGAATCCCGTTCATGGTGAGATG-CCCATTCCTATATAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGACTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAGTCAGACTTGGTATT-CAGTG--ATCAACTGTCTCTTGGGACTGTGCACTCGCTGTTTACTGGGCCAACATCAGTTTTGGCGGTGAGATAAAGGTTTGGGAACGTGACTCTG-C----G----GAGTGTTATAGCCCT-TTCTAATATCACCAGCTGGGACTGAGGTCTGCGC-----ATTG-CAAGGATGTTGGCGTAATGACTTTAAGCCAC Blastobotrys_proliferans_DQ442684_ AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TCTGGCGTCCGAGTTGTAATTTGAAGAAGGCATCTTTGGTAGTGGCTCTTGCATATGTTCCTTGGAATAGGACGTCATAGAGGGTGAGAACCCCGTACATGGTGAGATGCTCCACTGCTATGTAAAGGGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGCTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATG-TAATG--ATCAACTGTCTCTTGGGACTGTGCACTCGTTACTTACTGGGCCAACATCAGTTTTGGCGGTAGGATAATAACAGTTGAACGTGACTTTG-CTTC-GG-TGAAGTGTTATAGCTTC-TGTTGATACTACCAGCTGGGACTGAGGACCGCGC---TTTATG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_proliferans_EF584541 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT----GGAGTCCGAGTTGTAATTTGAAGAAGGCATCTTTGGTAGTGGCTCTTGCATATGTTCCTTGGAATAGGACGTCATAGAGGGTGAGAACCCCGTATATGGCGAGATGCTCCACTGCTATGTAAAGGGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGCTGAAAGGGAAGGGCTTGACATCAGACTCGGTTTG-TAATG--ATCAACTGTCTCTTGGGACTGTGCACTCGTTACTTACTGGGCCAACATCAGTTTTGGCGGTAGGATAATAACAGTTGAACGTGACTTTG-CTTC-GG-TGAAGTGTTATAGCTTC-TGTTGATACTACCAGCTGGGACTGAGGACCGCGC---TTTATG-CTAGGATGTTGGCGTAATGATGTTAAGCCAC Blastobotrys_proliferans_KM056338 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT----GGAGTCCGAGTTGTAATTTGAAGAAGGCATCTTTGGTAGTGGCTCTTGCATATGTTCCTTGGAATAGGACGTCATAGAGGGTGAGAACCCCGTATATGGTGAGATGCTCCACTGCTATGTAAAGGGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGCTGAAAGGGAAGGGCTTGACATCAGACTCGGTTTG-TAATG--ATCAACTGTCTCTTGGGACTGTGCACTCGTTACTTACTGGGCCAACATCAGTTTTGGCGGTAGGATAATAACAGTTGAACGTGACTTTG-CTTC-GG-TGAAGTGTTATAGCTTC-TGTTGATACTACCAGCTGGGACTGAGGACCGCGC---TTTATG-CTAGGATGTTGGCGTAATGATGTTAAGCCAC Blastobotrys_proliferans_U40098 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT----GGAGTCCGAGTTGTAATTTGAAGAAGGCATCTTTGGTAGTGGCTCTTGCATATGTTCCTTGGAATAGGACGTCATAGAGGGTGAGAACCCCGTATATGGTGAGATGCTCCACTGCTATGTAAAGGGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGCTGAAAGGGAAGGGCTTGACATCAGACTCGGTTTG-TAATG--ATCAACTGTCTCTTGGGACTGTGCACTCGTTACTTACTGGGCCAACATCAGTTTTGGCGGTAGGATAATAACAGTTGAACGTGACTTTG-CTTC-GG-TGAAGTGTTATAGCTTC-TGTTGATACTACCAGCTGGGACTGAGGACCGCGC---TTTATG-CTAGGATGTTGGCGTAATGATGTTAAGCCAC Blastobotrys_robertii_DQ839395 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TTGGGCGTCCGAGTTGTAATTTGAAGAAGGTAACTCTGGGGCTGGCCCTTGCATAAGTTCCTTGGAACGGGACGTCATAGAGGGTGAGAATCCCGTTTATGGTGGGGAG-TCCAGTCCTTTGTAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGGTTTG-CAGTG--GTCAGCTTTCTCTCGGGGAGGCGGTTACGCTGTTTACTGGGCCAACATCGATTCGGACGGCAGGATAATGACAACTGAATGTGGCTC-G-CCTC-GGT--GAGTGTTATAGCTTT-TGTTGATACTGCCAGCTTGGATCGAGGACTGCGC----TTCGG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_serpentis_AM410668 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TTAGGCGTCCGAGTTGTAATTTGAAGATGGCAACTTTGGGATTGGCTCTCGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAACCCCGTTCATGGTGAGATG-TCCAATCCTATGTAAAGTGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGGTATT-CAGTG--ATCAACTGTCTCTCGGGACTGTGCACTCGCTGTTTACTGGGCCAACATCGGTTTGGAGGGTGAGATAAAAGCTAGGGAATGTGGCACTG-CTTC-GGTA-GTGTGTTATAGCCCT-GGTCAATATCACCACTCTGGACCGAGGACTGCGC----TTTTG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Blastobotrys_terrestris_DQ442683_T AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTT-TTAGGCGTCCGAGTTGTAATTTGAAGATGGCAACTTTGGGATTGGCTCTCGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAACCCCGTTCATGGCGAGATGACCCAATTCTATGTAAAGTGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAAATCAGACTTGGTATT-CAGTG--ATCAACTGTCTCTCGGGACTGTGCACTCGCTGTTTACTGGGCCAACATCGGTTTAGAGGGTGAGATAAAAGCTAGAGAATGTGGCACTG-CTTC-GGTA-GTGTGTTATAGCTCT-GGTCAATATCACCACTCTAGACCGAGGACTGCGC---TTTATG-CTAGGATGTTGGCGTAATGATTTTAAGCCAC Saccharomyces_cerevisiae_AY048154 AGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGTACCTTC----GGTGCCCGAGTTGTAATTTGGAGAGGGCAACTTTGGGGCCGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGT--GTGGCGAGGAG-TGCGGTTCTTTGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTT-TTGTGCCCTCTGCTCCTTGTGGGTAGGGGAATCTCGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGAATGTAGCT-TG-CCTC-GGTA-AGTATTATAGCCTGT-GGG-AATACTGCCAGCTGGGACTGAGGACTGCGA---CGTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGC Trichomonascus_farinosus_U40132 AGTAACGGCGAGCGAAGCGGCAAAAGCTCAAATTTGAAAGCTAGCGTCTTT-TTAGGCGTTCGCGTTGTAATTTGAAGATGGCAACTTTGGAGACGGCCTTGGCATATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTACGTGGCCTTGTC-ACCGTCTCTTTGTAAAGTGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTTTG-TAACG--ATCAACTGTCTTTCGGGACTGTGCACTCGCCACTTACTAGGCCAGCATCAGTTCCGGCGGTGAGATAATGGTAGTGGAATGTGACTTTG-CTTC-GGTA-GAGTGTTATAGCCACATGCTGATGTCACCAGCTGGGACTGAGGACCGCGT---CTTTGA-CTAGGATGCTGGCGTAATGATCTTAAGCCAC ; END; [ The following blocks are output data for analysis step 18059 ] BEGIN TREES; TITLE Blastobotrys_meliponae_MP_analysis; LINK TAXA = TaxaForAnalysisStep18059; TREE PAUP = [&R] (Saccharomyces_cerevisiae_AY048154:0.207401,((Blastobotrys_muscicola_DQ442680_T:9.22584E-6,Blastobotrys_robertii_DQ839395:0.012185):0.04207,(Blastobotrys_indianensis_DQ442692_T:0.065645,(Blastobotrys_parvus_DQ442693:0.004897,(Blastobotrys_attinorum_AY442294:1.0E-8,Blastobotrys_attinorum_GU373758:0.024549):0.015617):0.010147,(Blastobotrys_malaysiensis_DQ442695_T:0.003784,(Blastobotrys_illinoisensis_DQ442696_T:0.004021,Blastobotrys_mokoenaii_DQ442694_T:0.00387):0.0063):0.119379,((Blastobotrys_arbuscula_DQ442689_T:0.006918,Blastobotrys_capitulata_U40104:0.009155):0.055939,(Blastobotrys_nivea_U40110:0.036814,(Blastobotrys_aristata_U40109:0.039765,Blastobotrys_elegans_U40095:0.011268,Trichomonascus_farinosus_U40132:0.064201):0.022699):0.020733):0.066903,((Blastobotrys_serpentis_AM410668:1.0E-8,(Blastobotrys_chiropterorum_DQ442682_T:0.003941,Blastobotrys_terrestris_DQ442683_T:0.003786):0.012):0.044017,((Blastobotrys_adeninivorans_DQ442697_T:1.0E-8,Blastobotrys_aff_inosifermentans_DQ442698_T:0.0079):0.02462,(Blastobotrys_americana_DQ442699_T:0.008489,Blastobotrys_peoriensis_DQ442700_T:0.008177):0.027956):0.034733):0.060359,((Blastobotrys_meliponae_URM7224T:1.0E-8,Blastobotrys_meliponae_URM7224.2:1.0E-8,Blastobotrys_meliponae_URM7224.3:1.0E-8):0.052516,(Blastobotrys_proliferans_DQ442684_:0.00181,(Blastobotrys_proliferans_EF584541:0.001979,Blastobotrys_proliferans_KM056338:1.0E-8,Blastobotrys_proliferans_U40098:1.0E-8):0.010526):0.044845):0.050667):0.057603):0.207401); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr97641] END; BEGIN TREES; TITLE Blastobotrys_meliponae_MP_analysis; LINK TAXA = TaxaForAnalysisStep18059; TREE PAUP = [&R] (Saccharomyces_cerevisiae_AY048154:50.0,((Blastobotrys_muscicola_DQ442680_T:100.0,Blastobotrys_robertii_DQ839395:100.0)99.699997:99.699997,(Blastobotrys_indianensis_DQ442692_T:100.0,(Blastobotrys_parvus_DQ442693:100.0,(Blastobotrys_attinorum_AY442294:100.0,Blastobotrys_attinorum_GU373758:100.0)61.719181:61.719181)50.085903:50.085903,(Blastobotrys_malaysiensis_DQ442695_T:100.0,(Blastobotrys_illinoisensis_DQ442696_T:100.0,Blastobotrys_mokoenaii_DQ442694_T:100.0)69.336670:69.33667)100.000000:100.0,((Blastobotrys_capitulata_U40104:100.0,Blastobotrys_arbuscula_DQ442689_T:100.0)99.900002:99.900002,(Blastobotrys_nivea_U40110:100.0,(Blastobotrys_aristata_U40109:100.0,Blastobotrys_elegans_U40095:100.0,Trichomonascus_farinosus_U40132:100.0)51.657288:51.657288)69.785461:69.785461)70.563934:70.563934,((Blastobotrys_meliponae_URM7224T:100.0,Blastobotrys_meliponae_URM7224.2:100.0,Blastobotrys_meliponae_URM7224.3:100.0)100.000000:100.0,(Blastobotrys_proliferans_DQ442684_:100.0,(Blastobotrys_proliferans_KM056338:100.0,Blastobotrys_proliferans_U40098:100.0,Blastobotrys_proliferans_EF584541:100.0)98.966667:98.966667)100.000000:100.0)61.102352:61.102352,((Blastobotrys_serpentis_AM410668:100.0,(Blastobotrys_chiropterorum_DQ442682_T:100.0,Blastobotrys_terrestris_DQ442683_T:100.0)96.105667:96.105667)100.000000:100.0,((Blastobotrys_aff_inosifermentans_DQ442698_T:100.0,Blastobotrys_adeninivorans_DQ442697_T:100.0)99.900002:99.900002,(Blastobotrys_americana_DQ442699_T:100.0,Blastobotrys_peoriensis_DQ442700_T:100.0)99.040215:99.040215)82.994064:82.994064)65.206497:65.206497)50.611668:50.611668)0:50.0); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr97640] END;