#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 20, 2025; 2:24 GMT TreeBASE (cc) 1994-2008 Study reference: Zhao Y. 2016. A putative pyruvate transporter TaBASS2 positively regulates salinity tolerance in wheat via modulation of ABI4 expression. BMC Plant Biology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S19163] [ The following blocks are input data for analysis step 18189 ] BEGIN TAXA; TITLE TaxaForAnalysisStep18189; DIMENSIONS NTAX=42; TAXLABELS Arabidopsis_thaliana_At1g78560 Arabidopsis_thaliana_At2g26900 Arabidopsis_thaliana_At3g25410 Arabidopsis_thaliana_At3g56160 Arabidopsis_thaliana_At4g12030 Arabidopsis_thaliana_At4g22840 Bacillus_subtilis_GI|16078995 Escherichia_coli_GI|75208242 Flaveria_trinervia_GI|305682287 Glycine_max_GI|356511623 Homo_sapiens_GI|14270135 Hordeum_vulgare_GI|326523177 Mus_musculus_GI|42564250 Nodularia_spumigena_GI|119509473 Nostoc_spec._GI|17134393 Oryctolagus_cuniculus_GI|3024224 Oryza_sativa_Os01g45750 Oryza_sativa_Os02g27490 Oryza_sativa_Os02g32930 Oryza_sativa_Os04g31210 Oryza_sativa_Os09g34900 Oryza_sativa_Os12g07270 Physcomitrella_patens_GI|162665804 Physcomitrella_patens_GI|162673571 Physcomitrella_patens_GI|162696749 Picea_sitchensis_GI|116787201 Saccharomyces_cerevisiae_ARR3 Selaginella_moellendorffii_GI|226442063 Selaginella_moellendorffii_GI|302786574 Solanum_lycopersicum_GI|350537205 Sorghum_bicolor_Sb01g016820 Sorghum_bicolor_Sb02g030200 Sorghum_bicolor_Sb03g029420 Sorghum_bicolor_Sb08g004520 Sorghum_bicolor_Sb09g028950 Staphylococcus_aureus_GI|82751914 Synechocystis_spec._GI|16330596 Thellungiella_halophila_GI|312281731 Triticum_aestivum_TaBASS2 Vitis_vinifera_GI|147784076 Zea_mays_GI|414878427 Zea_mays_GI|414886329 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M36141] TITLE Pyruvate_Transporter_TaBASS2; LINK TAXA = TaxaForAnalysisStep18189; DIMENSIONS NCHAR=529; FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y *" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Arabidopsis_thaliana_At1g78560 MASAISLSLLNGATPLKSNSLHKSRLTPLHLR----------TISCSRLSYSPSSREIS-LKTQSTVPISCR------RSRFDFVPRCGISSN--DLPTEKKKSFG-----------EWVEFVGEAVSTAFPIWVSLGCLLGLMRPSTFNWVT----------PNWTIVGLTITMLGMGMTLTLDDLRGALS---MPKELFAGFLLQYSVMPLSA----FFVSKLLNLPPHYAAGLILVGCCPGGTASNIVTYIARGNVA-LSVLMTAASTVSAVIMTPLLTA---KLAKQYITVDA---LGLLMSTLQVVL---------LPVLAG-------AFLNQYFKKLVKFVSPVMPPIAVGTVAILCGY-AIGQNASAILMS-GKQ--------------VVLASCLLHISGFLFGYLFSRILGIDVAS---------SRTISIEVGMQNSVLGVVLATQ----HFGNPLTAVPCAVSSVCHSILGSVLAGIWRRS--APKQLED--------------------------- Arabidopsis_thaliana_At2g26900 MASISRILPTDGRLSQCR--INTSWVPSTTR---------TQTHLDFPKLVSVSNSGI-SLRIQNSKPIS-----PVFALEATSSR--RVVCK---AAAGVSGDLPES----TPKELSQYEKIIELLTTLFPLWVILGTLVGIFKPSLVTWLE----------TDLFTLGLGFLMLSMGLTLTFEDFRRCLR---NPWTVGVGFLAQYMIKPILG----FLIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAIIMTPLLTK---LLAGQLVPVDA---AGLALSTFQVVL---------VPTIIG-------VLANEFFPKFTSKIITVTPLIGVILTTLLCAS-PIGQVADVLKTQ-GAQ--------------LILPVALLHAAAFAIGYWISKFS-FGEST---------SRTISIECGMQSSALGFLLAQK----HFTNPLVAVPSAVSVVCMALGGSGLAVFWRNLPIPADDKDDFKE------------------------ Arabidopsis_thaliana_At3g25410 ------------MTLIASLSLPPPAIQRQSLSEFHNLPAKSQSFNCQFRSSSSPLSSLHSSSLSNFLDFRLRRRNSGLVPVVACSTTPFMGRVGLHWRDGNMSLLSFCGG----TDVTEKADSSQFWSALLPFVVALTAVAALSYPPSFTWVS----------KDLYAPALGGIMLSIGIQLSVDDFALAFK---RPVPLSVGFVAQYVLKPLLG----VLVANAFGMPRTFYAGFILTCCVAGAQLSSYASSLSKADVA-MSILLTSSTTIASVIFTPLLSG---LLIGSVVPVDA---VAMSKSILQVVL---------VPITLG-------LVLNTYAKPVVTLLQPVMPFVAMVCTSLCIGS-PLSINRSQILSAEGLG--------------LIVPIVTFHAVAFALGYWFSKIPGLRQE--E-----EVSRTISLCTGMQSSTLAGLLASQ----FLGS-SQAVPAACSVVVMAIMGLCLASFWGNGFRIRDVLSLSTPQSTGYTAES--------------- Arabidopsis_thaliana_At3g56160 ---------MAIASTLASTQNPFLCLRQPPSP----------GNRSVVFRRCQDPCGRRWISRSIRACQPSDKVSGQFPFDFMYSSMLIPSSCGEWNRIHLGGDGGISASAQRLYFG--KELLSFASDNFLPLALVSGVGLGFANPTLGCLAD---------KYSFTKISTCGIFIISGLTLRTEAIGAAVKG--WPLGL-FGLISILLLTPSFS----RLIMLVQLQPRELVTGLGIFCCMPTTLSSGVALTHLAGGNAALALAVTVASNLLGILTIPFWVS---RYIAGGVGVSFP-TDQLFRSLIVTLL---------IPLIIG-------KVIRESFKGFANFVDNNRKLFSKINAICLSLVPWIQVSRSRSLLLSVQPKVFLAAVGIG--ILLHLSLLAFNAVSIRILSGLTGGSK---SSKE-----N-STAVLLVSSQKTLPVMVAVVEQLGGAFGETGLLVLPCVAAHLNQIMIDSVLVNLWLRRGKDTSTKVKTA------------------------- Arabidopsis_thaliana_At4g12030 ------------MGVIS-PTETLFLKSQHRLLQPRNYSYALAFHSTRRVANFPRNSFSSLGSCSVDFPLRSNPISQNSKSIHPWRRYVSE--------SDSNELYHKK--------VSSIMETLKQAYSFIPHGILLSTILALVYPPSFTWFK----------PRYFVPGLGFMMFAVGINSNERDFLEALK---RPDAIFAGYIGQYLIKPLLGYIFGVIAVSLFNLPTSIGAGIMLVSCVSGAQLSNYTTFLTDPSLAALSIVMTSISTATAVLVTPMLSL---LLIGKKLPVDV---FGMISSILQVVI---------TPIAAG-------LLLNRLFPRLSNAIKPFLPALTVIDMSCCIGA-PLALNIDSILSPFGAT--------------ILFLVITFHLLAFVAGYFFTGFFFSKAPDVK-----ALQRTISYETGMQSSLLALALATK----FFQDPLVGVPPAISTVVMSLMGVSLVTIWKNRKE---------------------------------- Arabidopsis_thaliana_At4g22840 ------------MSVITTPIETLHLKSTLRLL-PR------AVYRSQRIQVFPPNIFS---NTSLSSPLRIDPISQVGGSRNLWRRYASDNFSEMGLDPGADPFKVIE--------KPSIVDRMKKANSILPHVVLASTILALIYPPSFTWFT----------SRYFVPALGFLMFAVGINSNEKDFLEAFK---RPKAILLGYVGQYLVKPVLGFIFGLAAVSLFQLPTPIGAGIMLVSCVSGAQLSNYATFLTDPALAPLSIVMTSLSTATAVLVTPMLSL---LLIGKKLPVDV---KGMISSILQVVI---------APIAAG-------LLLNKLFPKVSNAIRPFLPILSVLDTACCVGA-PLALNINSVMSPFGAT--------------ILLLVTMFHLSAFLAGYFLTGSVFRNAPDAK-----AMQRTLSYETGMQSSLLALALATK----FFQDPLVGIPPAISTVVMSLMGFTLVLIWSKEKSNTF------------------------------- Bacillus_subtilis_GI|16078995 --------------------------------------------------------------------------------------------------------------------MDIIRKISHFAGQTFGIWVIVFAVLGFSFPSLFTWIS-----------SYITIFLGIIMFGMGLTLQADDFKELVR---KPWQVIIGVIAQYTIMPLVA----FGLAFGLHLPAEIAVGVILVGCCPGGTASNVMTFLAKGNTA-LSVAVTTISTLLAPVVTPLLIM---LFAKEWLPVSP---GSLFISILQAVL---------FPIIAG-------LIVKMFFRKQVAKAVHALPLVSVIGIVAIVSA-VVSGNRENLLQS-GLL--------------IFSVVILHNGIGYLLGFLCAKLLKMDYPS---------QKAIAIEVGMQNSGLGAALATA----HFSP-LSAVPSAIFSVWHNLSGSMLATYWSKKVKKKQAGSKSSNLSL--------------------- Escherichia_coli_GI|75208242 -------------------------------------------------------------------------------------------------------------------------MKLFRILDPFTLTLITVVLLASFFPARGDFVP-F-------FENLTTAAIALLFFMHGAKLSREAIIAGGG---HWRLHLWVICSTFVLFPILG--VLFAWWKPVNVDPMLYSGFLYLCILPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVG---LVMNVHGAGGG--LEQVGKIMLQLLL----------PFVLG-------HLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVNGIWHKVGWG----------SLLFIVVVSCVLLAIVIVVNVFMARRLGFNKAD---------EITIVFCGSKKSLANGIPMANILFP-TSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSTDKA--------------------- Flaveria_trinervia_GI|305682287 MASISSIVGKNCNFQSRNAVVHRPRCDLPSRL--------IQNHVSLRRGVCSSDDGKRCLAIQNKRFF--------PAILQSLDSSSKIQCQ---AATNVPGDVPTNA--NNSSGMSTYEKIIETLTTLFPLWVIIGTIIGIYKPSAVTWLE----------TDLFTLGLGFLMLSMGLTLTFEDFRRCLR---NPWTVGVGFLAQYLIKPVLG----YFIAVALKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAIIMTPLLTK---VLAGQLVPVDA---AGLAISTFQVVL---------VPTIFG-------VLLNEFFPKFTSKIITVTPLIGVLLTTLLCAS-PIGQVAEVLKTQ-GAQ--------------LLFPVALLHCAAFFIGYALSKLS-FGEST---------SRTISIECGMQSSALGFLLAQK----HFTNPLVAVPSAVSVVCMALGGSALAVYWRNQPIPVDDKDDFKE------------------------ Glycine_max_GI|356511623 MSTIILRVAGTYDALLKPSFRTPTWTKLHN------------SHLEVKGHSYLPESGG-SCAIRSMLRGPVAVLELPLSLQASRRRNSQIFCN---ATTDISGDIPES-----AGELSQYEKVIETLTTLFPVWVVLGAIVGIYKPTAVTWLA----------TDLFSLGLGFLMLSMGLTLTFEDFRRCLQ---NPWTVGIGFLAQYLIKPMLG----FAIAMTLKLSAPLATGLILVACCPGCQASNVATFIAKGNVA-LSVLMTTCSTIGAIIMTPLLTN---LLAGQLVPVDA---VGLALSTFQVVL---------VPTIVG-------VLANELFPKFTSKIITITPLIGVILTTLLCAS-PIGLASDALKAQ-GAQ--------------LVLPVVFLHAASFALGYWVSRIS-FGEST---------SRTISIECGMQSSAFGFLLAQK----HFTNPLVAVPSAVSVVCMALGGSALAVFWMNRPIPLDDKDDFKE------------------------ Homo_sapiens_GI|14270135 --------------------------------------------------------------------------------------------------------------------------MNDPNSCVDNATVCSGASCVVPESNFNNILSVV-------LSTVLTILLALVMFSMGCNVEIKKFLGHIK---RPWGICVGFLCQFGIMPLTG----FILSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVDGDMD-LSVSMTTCSTLLALGMMPLCLL---IYTKMWVDSGS---IVIPYDNIGTSLVS-----LVVPVSIG-------MFVNHKWPQKAKIILKIGSIAGAILIVLIAVVGGILYQSAWIIAP-----------------KLWIIGTIFPVAGYSLGFLLARIAGLPWYR---------CRTVAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAYKKCHGKNKAEIPESKENGTEPESSFYKANGGFQPDEK Hordeum_vulgare_GI|326523177 -MAPSATCPLHSMASVSRALRPRPRLAAP------------RLGCGLRVGCSVPAYGSAATEKTEWGLAIAP---APSTTLVPVVRSRQIFCK---AEANISSNLPAS----GPTGASQYEKIVELLTTLFPVWVILGTVIGIYKPSMVTWLE----------TDLFTLGLGFLMLSMGLTLTFEDFRRCLR---NPWTVGVGFLAQYLIKPMLG----YAIALTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAIAMTPLLTK---LLAGQLVPVDA---AGLAISTFQVVL---------VPTIVG-------VLAHEYFPKFTERIISITPLIGVILTTLLCAS-PIGQVAEVLKTQ-GAQ--------------LILPVALLHAVAFTLGYWMSKWSSFGEST---------SRTISIECGMQSSALGFLLAQK----HFTNPLVAVPSAVSVVCMALGGSALAVFWRNRGLPADDKDDFKE------------------------ Mus_musculus_GI|42564250 --------------------------------------------------------------------------------------------------------------------------MDNSSVCPPNATVCEGDSCVVPESNFNAVLNTV-------MSSVLTTLLAMVMFSMGCNVEVHKFLGHIK---RPWGIFVGFLCQFGIMPLTG----FILSVASGILPVQAVVVLIMGCCPGGTGSNILAYWIDGDMD-LSVSMTTCSTLLALGMMPLCLF---VYTKMWVDSGT---IVIPYDSIGISLVA-----LVIPVSIG-------MFVNHKWPQKAKIILKIGSITGVILIVLIAVIGGILYQSAWIIEP-----------------KLWIIGTIFPIAGYSLGFFLARLAGQPWYR---------CRTVALETGMQNTQLCSTIVQLSFSPEDLNLVFTFPLIYTVFQLVFAAVILGIYVTYRKCYGKNDAEFLEKTDNEMDSRPSFDETNKGFQPDEK Nodularia_spumigena_GI|119509473 --------------------------------------------------------------------------------------------------------------------------------------MEGNFLTAVFLP----------------------LALFIIMLGMGLSLTLDDYKGVLI---YPKAVVIGLVSQLVMLPIVG----FGIASMFPLNPELAVGVMILVACPGGATSNMITFLAEGDVA-LSVTLTAISSLITVFTIPLVVN---FAMQTFLGAGTTLQLPVLNTVLQIAVMT------LLPLAMG-------MGINRYAPGIAAKANKPVKWLSLFFLSVVLTG-IMLQERDNLIPSVMAVG---------------WVTLVLNVATMTLGFAIATLAKLGEKR---------ARAITVEVGIQNGTLAIAIASSPT--LLNNSTMAVPAAIYSLLMFVTGVGFA-FFVSRIRR--------------------------------- Nostoc_spec._GI|17134393 --------------------------------------------------------------------------------------------------------------------------------------MQANVFTNVILP----------------------LALAIIMLGMGLSLQIEDFKRITK---YPKAVSIGSATQLILLPIMG----FLVAKVVPMQPEIAVGLVILSLCPGGPSSNMITYLAQGDVA-LSVTLTVVSSMVTIFTIPIFAN---LALQHFLGQTAAIALPIGSTMLQIFLIT------IVPIGLG-------MYIKRIFPATALRLEKATNRLAIAFLALIILI-LVIREWNRIPGFIVQVG---------------VGVVILNILAMLSGWCMSKFFKLNIPQ---------QICVAIEVGIQNGTLAIAITAG----LLQNEDMAIPAAIYSLFMNLT--AFAAIYYGRKLSATNSVSNHLVGKV-------------------- Oryctolagus_cuniculus_GI|3024224 --------------------------------------------------------------------------------------------------------------------------MDNSSVCSPNATFCEGDSCLVTESNFNAILSTV-------MSTVLTILLAMVMFSMGCNVEINKFLGHIK---RPWGIFVGFLCQFGIMPLTG----FILSVASGILPVQAVVVLIMGCCPGGTGSNILAYWIDGDMD-LSVSMTTCSTLLALGMMPLCLF---IYTKMWVDSGT---IVIPYDSIGISLVA-----LVIPVSIG-------MFVNHKWPQKAKIILKIGSIAGAILIVLIAVVGGILYQSAWIIEP-----------------KLWIIGTIFPIAGYSLGFFLARLAGQPWYR---------CRTVALETGMQNTQLCSTIVQLSFSPEDLNLVFTFPLIYTVFQLVFAAIILGMYVTYKKCHGKNDAEFLEKTDNDMDPMPSFQETNKGFQPDEK Oryza_sativa_Os01g45750 -MAASTTCPARSMASVSRALRPRPHAAIASAAVR----TAARLGGGLGIVCSMPSYG--RKEKEEWGLTIAS---APATTAAPALRSCQLLCK---AEANISSNLPES----IPSEANQYEKIVELLTTLFPVWVILGTIIGIYKPSMVTWLE----------TDLFTVGLGFLMLSMGLTLTFEDFRRCMR---NPWTVGVGFLAQYLIKPMLG----FAIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAIVMTPLLTK---LLAGQLVPVDA---AGLAISTFQVVL---------LPTIVG-------VLAHEYFPKFTERIISITPLIGVLLTTLLCAS-PIGQVSEVLKAQ-GGQ--------------LIIPVALLHVAAFALGYWLSKVSSFGEST---------SRTISIECGMQSSALGFLLAQK----HFTNPLVAVPSAVSVVCMALGGSALAVFWRNRGLPANDKDDFKE------------------------ Oryza_sativa_Os02g27490 ------------------MAAAVAASSSSSSSSCAAVGVATASHPHRHRQARFVVSPPAPASPAALLWRRPRR----VAPTTFCS-APSLGRVGWPRREGAAWLLSFRAGPVSSPSSAAAGDPSQALSALLPLVVAATAVAALGNPATFSWVS----------KEYYAPALGGIMLSIGIKLSIDDFALAFK---RPVPLTIGYMAQYIVKPLMG----VLIARAFGMPSAFFAGFVLTCCVSGAQLSSYASFLSKGDVA-LSILLTSCSTISSVVVTPVLTG---LLIGSVVPVDG---IAMAKSILQVVL---------VPVTLG-------LLLNTYAKAVVNVIQPVMPFVAMLCTSLCIGS-PLAINRSKILSSEGFL--------------LLLPIVTFHIAAFIVGYWISKLPMLRQE--E-----PVCRTISVCTGMQSSTLAGLLATQ----FLGS-SQAVPAACSVVIMAIFGLTLASYWGNGLRIRDIGSRFVPQASAGVSS---------------- Oryza_sativa_Os02g32930 ----------------MVTTH-HLCLLRSTVL----------SVPVRLRAPRAPPH--PRLPTASASASSYHGPT-----HLRRLRPLRAAAAAAGGASPDGADGAKRPAPAAASSSLGAALVGFARSNFLPLALIAGIALALMDPTLGCLAH---------KYSLSKYSTFGIFLISGLTLRTKELGAALEA--WPAGL-FGLASILLFTPFLA----QFIMQIKFFPHEFITGLAMFCCMPTTLSSGVTLTQLVGGNTALALAMTAISNLLGIMIVPLSLA---KYIGVGAGVSLP-TEKLFKSLVTTLL---------IPIILG-------KVARETSKGIAGFVDGNKQGFSVTSAILLSLVPWIQVSRSRSLLLSVQPKAFAVAVTVG--VLLHFALLAFNAAALHILSRLEQRGVSVFARNE-----Y-ARAVILVASQKTLPVLVAVVEQLGGALGESGLLVIPCVAAHINQIIIDSIIVNWWRQRDQQFANAK---------------------------- Oryza_sativa_Os04g31210 ------MPLLR-RPPAAPHRTPIHHDKRLHLF----------STHNTRHRATVSSLPVTCLRIRYSSSNPVR------HLCGIPSSRCHAAAD--PAPSKIPGGGSGALEAGVVGWRDLLLQVGEVLSLGFPVWVASACAVALWRPPAFLWVS----------PMAQIVGISFTMLGMGMTLTLDDLKTALL---MPKELASGFLLQYSVMPLSG----FLISKLLNLPSYYAAGLILVSCCPGGTASNIVTYLARGNVA-LSVLMTAASTFAAAFLTPLLTS---KLAGQYVAVDP---MGLFVSTSQVVL---------APVLLG-------ALLNQYCNGLVQLVSPLMPFIAVATVAVLCGN-AIAQNASAILSS-GLQ--------------VVMSVCWLHASGFFFGYVLSRTIGIDISS---------SRTISIEVGMQNSVLGVVLASK----HFGNPLTAVPCAVSSVCHSVYGSLLAGIWRSL--PPNDKGQ--------------------------- Oryza_sativa_Os09g34900 ------------MAPN-----AAVLVRPHIAG--------VHHLPTGRRLPR-----LAPPQAVSPP-FSRQKGSVVAASGRVWASASGSFEKDRIGDDDVLASPQIV-----EESKVDLLKILKSANTIIPHVVLGSTILALVYPPSFTWFT----------TRYYAPALGFLMFAVGVNSSVKDFIEAIQ---RPDAIAAGYVGQFIIKPFLGFLFGTLAVTIFNLPTALGAGIMLVSCVSGAQLSNYATFLTDPHMAPLSIVMTSLSTATAVFVTPTLSY---FLIGKKLPVDV---KGMMSSIVQIVV---------APIAAG-------LLLNRYLPRLCSAIQPFLPPLSVFVTALCVGS-PLAINIKAVLSPFGLA--------------TVLLLFAFHTSSFIAGYHLAGTWFRESADVK-----ALQRTVSFETGMQSSLLALALANR----FFPDPLVGVPPAISVVLMSLMGFALVMVWSKRTKE--------------------------------- Oryza_sativa_Os12g07270 -------------------MAPLLLLLPP-----------LRLLPATLLRATSRPASPRRGLSYSYPRR-------VAAVLRQCRAAAPPPPAPP-------------------DAVPRWHAALAAAAGLYPAYVTAGAAVAVARPDAFRWFVAL-------APGSYTFALGLIMLAMGLTLELREFLALLRE--RPLSILFGCAAQYTIMPAFG----AIVSRVLGLSPPISVGLILLGCCPGGTASNVVTLVAKGDVP-LSIVMTVCSTLGAVFLTPLLTK---ILAGAYVPVDA---VKLSLSTLQVVV---------APILLG-------SSIQSAFPSVVKFVTPFAPLLAVLTSSLLACS-VFSENFVRLRSTIADASYGNGGLFSGDIGVVMLSVFLLHCAGFVVGYTTAAIGGFKER---------QRRAISIEVGMQNSSLGVVLATA----HFSSSLVALPAALSAVIMNIMGSTLGLVWQFMTPPDSKNENR-------------------------- Physcomitrella_patens_GI|162665804 ----------------------------------------------------------------------------MLTGLKKWEDA------------------------------------LKHVNVYIPHAVVASTVLALSYPPSFTWFT----------TKYYAPALGFLMFAVGVNLSIDDFKHAVE---RPGPVALGLAAQYVLKPLLGVLFATFATRLMQLPEAIGSGLILCACVSGAQLSNYATFLTEPTLAPLSIVMTALSTALAVVVTPLLTL---LLLGKRLPIDL---VGMITNITEIVV---------VPIASG-------LFLNRFLPQVTRLIRPFLPALSLLTTCCCIGS-PLAVNINAIRSPFGLG--------------ILLPVVSFHTSAFLAGYKITEVLFPKADDLT-----ALARTISFESGMQSSLLGLALANK----FFPDPVVGLPSAISVVIMSLMAFGLVIHWNKHKHP--------------------------------- Physcomitrella_patens_GI|162673571 ----------------------------------------------------------MFLPLGGKGLRLR-----------SEKEDRSIVCG---AEVGASGGAEVS----APRELNSFEKVVDVLTTMFPVWVILGTLIGIYKPSAVTWLN----------TDLFTLCLGFLMLSMGLTLTVEDFRRCLR---NPWTVGVGFVAQYLVKPVLG----FVIAHALKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTASTIGAIFMTPLLTK---VLAGQLVPVDA---VGLAVSTFQVVL---------MPTVVG-------VVAHEMFPKIVEKIITVTPLVGVIMTTLLCAS-PIGQVSDVLVAQ-GAQ--------------LILPVALLHLAAFALGYFMSKMFKFGEST---------SRTISIECGMQSSALGFLLAQK----HFSNPLVAVPSAVSVVAMALGGSALAVYWRNQAIPADDKDDFKE------------------------ Physcomitrella_patens_GI|162696749 ----------------------------------------------------------------------MQ------GGIESEGGEGEGEGD--GKPSELL--------------ATSIEAFGEALSSGFPIWVAAACVAGLVKPAAFTWIQ----------GQVQIIGLSITMLGMGMTMSLDDLKGALA---MPKELVAGVLLQYTVMPTAG----ALVSRLLNLPANYAAGLILVSCCPGGTASNVVTYLARGNVA-LSVLMTAASTFLAVILTPMLTS---KLVGQYVSVDA---ASLFSSTLQVVL---------LPVTVG-------VLLAHFLPGLVRRVSPLAPSVAVVTVAAICAG-AISHSASTIRQS-GGQ--------------VLIAVLALHVAGFFFGYVLSRVLGFEEST---------SRTVSIEVGMQNSVLGVVLASK----HFASPLTAVPCAVSSVCHSILGSALARFWRSR--RANHQTTGNATLS--------------------- Picea_sitchensis_GI|116787201 MAASMASWTCSRISPLQQKLRTDAYP-SPYIRRVSLSLAQLSSQLNLRSKILNPDCGYQQLGIGAKGIGISS-----LLPRPSDNGRMQMLCK---AEANAVGDVPGS----ASSEMSPFERVVELLTTLFPVWVVIGAAIGIYKPSVVTWLQ----------TDLFTLGLGFLMLSMGLTLKFDDFKRCLR---NPWTVGVGFLAQYLIKPLLG----FAIALSLKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAIIMTPLLTK---LLAGQLVPVDA---AGLAVSTFQVVL---------MPTIIG-------VLLHEYFPKFTEKIITFTPLIGVILTTLLCAS-PIGQVSGVLKSQ-GAG--------------LVLPVAILHAVAFSLGYWVSKWSSFGEST---------SRTISIECGMQSSALGFLLAQK----HFTNPLVAVPSAVSVVFMALGGSVLAVYWRNVPIPFDDKDDFKE------------------------ Saccharomyces_cerevisiae_ARR3 ------------------------------------------------------------------------------------------MSEDQKSENSVPSKVNMVNRTDILTTIKSLSWLDLMLPFTIILSIIIAVIISVYVPSSRHTFDAEGHPNLMGVSIPLTVGMIVMMIPPICKVSWESIHKYFYRSYIRKQLALSLFLNWVIGPLLMT---ALAWMALFDYKEYRQGIIMIGVARCIAMVLIWNQIAGGDNDLCVVLVITNSLLQMVLYAPLQIFYCYVISHDHLNTSNRVLFEEVAKSVGVFLG--------IPLGIG-IIIRLGSLTIAGKSNYEKYILRFISPWAMIGFHYTLFVIFISRGYQFIHEIGSAIL-------------CFVPLVLYFFIAWFLTFALMRYLSISRSDTQRECSCDQELLLKRVWGRKSCEASFSITMTQCFTMASNNFELSLAIAISLYGNNSKQAIAATFGPLLEVPILLILAIVARILKPYYIWNNRN---------- Selaginella_moellendorffii_GI|226442063 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLGMGMTLSIDDLKGALS---MPREVAAGVFLQYTIMPLTG----ATVARVLGLPSHYAAGLVLVSCCPGGTASNVVTYLARGNVA-LSVIMTAISTFLAVVMTPLLTA---KLAGQYVAVDA---NALVLSTLQVVL---------LPVLTG-------AGMAHYLPGLVRILSPLAPTVAVVTIAAVCAG-AIAQSAAAITTT-GAQ--------------IFVAVAMLHASGFLLGYLAAKVIRFSEST---------ARTISIEVGMQNSVLGVVLANQ----HFTSPLTAVPCAISSVCHSVFGSALAGFWQAS--SQGPSES--------------------------- Selaginella_moellendorffii_GI|302786574 -MAVLA-------------LRSTAFAGSAGIHRRSWRPATAEARLGFG--IAKPGEG-AVAGMKAGSFSLVN-----TPTHRSHFPSLIAHRRERPVECHAAASAGEI----PEKELSTFERVVELLTTMFPVWVILGTVIGIVKPTAVTWLQ----------TDLFTVGLGFLMLSMGLTLTFDDFRRCLR---NPWTVGVGFLAQYAVKPILG----FLIALSLKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAILMTPLLTK---VLAGQLVPVDA---VGLAVSTFQVVL---------VPTIIG-------VLSNEYFPKFTQKIVTVTPLVGVILTTLLCAS-PIGQVSEVLVTQ-GTQ--------------LIFPVALLHAAAFLLGYWLSKLCNFGEMT---------ARTISIECGMQSSALGFLLAQK----HFSNPLVAVPSAVSVVCMALGGSGLAVFWRNRALPKDDKDDFKE------------------------ Solanum_lycopersicum_GI|350537205 MASLSRFIGKQCKLQCS-DTLQRPSYGFCVRR--------SPTHLSMG-MRNKDEIGRYNLFINQNQSK--------TSLVQSPCNRKIVCCE---AASNVSGES-------SSTGMTQYEKIIETLTTLFPLWVILGTIIGIYKPSAVTWLE----------TDLFTLGLGFLMLSMGLTLTFDDFRRCLR---NPWTVGVGFLAQYFIKPLLG----FTIAMALKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTVGAIVMTPLLTK---LLAGQLVPVDA---AGLAISTFQVVL---------VPTVIG-------VLSNEFFPKFTSKIVTITPLIGVILTTLLCAS-PIGQVADVLKTQ-GAQ--------------LLLPVAALHAAAFFLGYQISKFS-FGEST---------SRTISIECGMQSSALGFLLAQK----HFTNPLVAVPSAVSVVCMALGGSALAVYWRNQPIPVDDKDDFKE------------------------ Sorghum_bicolor_Sb01g016820 ------MLLLS-PSPPAP-AAAVTAPRRILLA----------PHR--RLNATSTPPRLACLRLRPATPLRAR------GIPSRTGCRAAADAD--AAPSQAPGGDG--------GVRGAVVRVGEALSLGFPVWVASACALALWRPPAFLWVG----------PTAQMLGLSFTMLGMGMTLTLDDLKTALL---MPRELAAGFILQYTVMPLSG----FFVSKLLKLPSHYAAGLILVACCPGGTASNIVTYLARANVA-LSVLMTAVSTFAAAFMTPLLTS---KLAGQYVAVDP---MGLFVSTSQVVL---------APVLLG-------ALLNQYCNGLVHLVSPLMPFIAVATVAVLCGN-AIAQNASAILAS-GSQ--------------VVLSVGCLHASGFFFGYVLSRLLGIDISS---------ARTISIEVGMQNSVLGLVLATK----HFGNPLTAVPCAVSSICHSVYGSILAGIWRSM--PTKDKGE--------------------------- Sorghum_bicolor_Sb02g030200 ------------MAPA-----AAVLKRAHLAG--------VHSLALRRRQPGPPDRVSVPSLAIPSPRVSWQQGSGVVAKRRFWASASGSLAKDNTGEDAASPS-QLQGV---EESKVDLLKILKSANSIIPHIVLGSTILAVVYPPSFTWFT----------TRYYAPALGFLMFAVGVNSSVKDFIEAIK---RPDAIVAGYIGQFVIKPLLGFLFGTLAVAVLNLPTGLGAGIMLVSCVSGAQLSNYATFLTDPHMAPLSIVMTSLSTATAVFVTPTLSY---FLIGQKLPVDV---KGMMSSIVQIVV---------APIAAG-------LLLNRFLPRLCAAIQPFLPPLSVFVTALCVGS-PLAINIKAVLSPFGLA--------------IVLLLFAFHTSSFVAGYHLAGTWFHKSDDVK-----ALQRTISFETGMQSSLLALALANK----FFPDPLVGVPPAISVVLMSLMGFALVMVWSKKTEA--------------------------------- Sorghum_bicolor_Sb03g029420 -MAPSAAC---SMASVSRALRPRPRPRAAVCS-------AARLGCGLGIACSMPSHG-MGNEKHELGLAVAS---APAATITPVLRSRQILCK---AEANVSSNLPDT----LPTGVSQYEKIVELLTTLFPVWVILGTIIGIYKPSMVTWLE----------TDLFTMGLGFLMLSMGLTLTFEDFRRCLR---NPWTVGVGFLAQYLIKPMLG----FSIALALKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTVGAIVMTPLLTK---LLAGQLVPVDA---AGLAISTFQVVL---------VPTVVG-------VLAHEYFPKFTEHIITVTPLIGVLLTTLLCAS-PIGQVAEVLKTQ-GGQ--------------LIIPVALLHVAAFALGYWLSRLSTFGEST---------SRTIAIECGMQSSALGFLLAQK----HFTNPLVAVPSAVSVVCMALGGSALAVYWRNKGLPTDDKDDFKE------------------------ Sorghum_bicolor_Sb08g004520 -------------------MAPLLLSLPLR----------LRPIPAAAGSSTSR-IAPRPRSPRPFPRRRLLLRLPALQAQVQCLAAPAGGPDAP-------------------APTPRWHAALSAAAGLYP------ASVAVARPEAFRWFVAL-------APGSYTATLGFIMLAMGLALQLRDFAALLRD--RPLAILFGCAAQYAIMPAFG----AIVSHALGLPPPLSAGLILLGCCPGGTASNVVTLVAQGDVP-LSIVMTVCSTLAAVFLTPLLTK---ILAGAYIPVDA---VKLSLSTLQVVV---------APILLG-------SSIQTAFPSVVQFVTPFAPLMAVLASSLLACS-VFSENFVRLRSTIADASSVSGNFFSRDIGIVMLSVFLLHFAGFFVGYAAAAIGGFKEK---------QRRAISIEVGMQNSSLGVVLATA----HFSSPLVALPPALSAVIMNMMGSTLGLIWQSISPSVSENETTDITNA--------------------- Sorghum_bicolor_Sb09g028950 ----------------MVSYHPSLSLLRPSVL----------TARASVIGRCSTPN--AFVSIPVVSAAP------------LRLRPLLRAAAG-GAASPVGGNGGKRAVPPSA------LLINFARSNFLPLALISGVILGLLDPTLGCLAH---------EYSLSKFSTFGIFVMSGLTLRTKELGTALEA--WPAAL-YGLGSILLLTPFVS----QFIMQVQFFPREFITGLAIFCCMPTTLSSGVILTQLVGGNSALALAMTVSSNLLGIIIVPLSLA---RYIGTGAGVSLP-TEKLFRSLVTRLL---------IPLIIG-------KVAREASKGIADFVDRNQQGFSVGNAVLLSLVPWIQISRSRSLILSVQVEAFAAAITVG--VLIHLALLAFNIAMLHILSRLGKKGDSVFAKKE-----Y-TRAVILVSSQKTLPVMITVVEQLGGALGESGLLVIPCVFAHINQIIVDSIIVNWWRRRDQQNK*------------------------------ Staphylococcus_aureus_GI|82751914 ----------------------------------------------------------------------------------------------------------------------MFQKLSKFATKSFLVWMLVAAVIGFIFPQHVATLG-----------KWVPYLLGIVMLGMGLTITPNDFKMVFK---APRAVIIGVCLQFSIMPTLA----FIIAKSFHLPPDIAVGVILVGCCPGGTSSNVMSYLAKANVA-LSVSITTVSTLLAPFVTPALIY---LFANEWLEVSF---LSMLWSVVQVVL---------IPIALG-------IVLQIINRKIAEKASTALPIISVVAISLILAI-VVGGSKHQILTT-GLL--------------IFLVVILHNVLGYTIGYWLARLLKLDRQD---------QKAVSIEVGMQNSGLAVSLAAL----HFNP-IAAVPGAVFSFIHNVTGPILAKYWSKKL----------------------------------- Synechocystis_spec._GI|16330596 --------------------------------------------------------------------------------------------------------------------------------------MESNFLTTIFLP----------------------LALFLIMFGMGLGLTIKDFNRIWL---EPKAVAIGLIAQLVMLPMVG----FGLSSLFSLSPELAVGLMILAACPGGSTSNVITYLLKGNVA-LSITLTAISSLVTIITIPLVVN---LAANYFMGEQFALQLPFLKTVLQIAVIT------IIPVSLG-------MIFYHFLPKIAMVMEKNVKWLSLFFLGIIIVA-ILVKERENLADFFLQVG---------------GVTVTLNLLTMGLGYGIAILAGLGLAE---------RKSITIEVGIQNGTLAIAIAT--T--LLNAPIMAIPAAIYSVVMFLTSGIFAGLLKAKIFRGLKST---------------------------- Thellungiella_halophila_GI|312281731 MASISRILPTDGRLSQCNSGIGASWVPATRR---------AQSHLVSPKLLSVSKAGI-SLRIQNSKPLR-----SVFALESAASRSSRVACK---AAADLSGDVPE-----TPKELGQYEKIIELLTTLFPLWVILGTLVGIFKPSLVTWLE----------TDLFTLGLGFLMLSMGLTLTFEDFRRCLR---NPWTVGVGFLAQYLIKPILG----FLIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAIIMTPLLTK---LLAGQLVPVDA---AGLAVSTFQVVL---------MPTIVG-------VLANEFFPKFTSKIITVTPLIGVILTTLLCAS-PIGQVSTVLRTQ-GAQ--------------LILPVALLHAAAFAIGYWISKFS-FGEST---------SRTISIECGMQSSALGFLLAQK----HFTNPLVAVPSAVSVVCMALGGSGLAVFWRNQPIPADDKDDFKE------------------------ Triticum_aestivum_TaBASS2 -MAPSATCPLHSMASVSRALRPRPRLAAP------------RLGCGLRVGCSVPAYGSAATEKAEWGLAIAP---SPATTLVPVVRSRQIFCK---AEANISSNLPAS----KPTGASQYEKIVELLTTLFPVWVILGTVIGIYKPSMVTWLE----------TDLFTVGLGFLMLSMGLTLTFEDFRRCLR---NPWTVGVGFLAQYLIKPMLG----YAIALSLKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAIAMTPLLTK---LLAGQLVPVDA---AGLAISTFQVVL---------VPTIVG-------VLAHEYFPKFTERIISITPLIGVILTTLLCAS-PIGQVAEVLKTQ-GAQ--------------LILPVALLHAVAFALGYWISKWSSFGEST---------SRTISIECGMQSSALGFLLAQK----HFTNPLVAVPSAVSVVCMALGGSALAVFWRNRGLPADDKDDFKE------------------------ Vitis_vinifera_GI|147784076 MASMSRFVLKDCKLQPF-DALYGPSSCSLARR--------IHTRVEVRGGCSLPEKGR-NLAIQNKQHSSIVALSGPSSIIQASRN-SHILCK---AAANVSGDVPG----NTPAGMSQYERIIETLTTLFPVWVILGTVIGIYKPAAVTWLE----------TDLFTICLGFLMLSMGLTLTFEDFRRCLR---NPWTVGVGFLAQYLIKPMLG----FFIVMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAIVMTPLLTK---LLAGQLVPVDA---A?VNGFTLEFSIPKIDDQMGWCPIIQGLAISTLPVLSNEFFPKFTSKIVTVTPLVGVILTTLLCAS-PIGKVSDVLKTQ-GAQ--------------LILPVAILHAAAFALGYWVSKIS-FGEST---------SRTISIECGMQSSALGFLLAQK----HFTNPLVAVPSAVSVVCMALGGSALAVFWRNQPIPVDDKDDFKE------------------------ Zea_mays_GI|414878427 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLAMGLTLQLSDFAALLRD--RPLAILFGCAAQYTIMPAFG----AIISHALGLPPSLSAGLILLGCCPGGTASNVVTLVAQGDVP-LSVVMTVCSTLAAVFLTPLLTK---ILAGAYIPVDA---VKLSLSTLQVVV---------APILLG-------SLIQTAFPSVAQFLSPFAPLMAVLASSLLASS-VFSENFVRLRSTIADASPVNGMFFG-DVGTVIFSVFLLHFAGFFVGYAAAAIGGFKEK---------QRRAISIEVGMQNSSLGVVLATA----HFSSPLVALPPAVSAVVMNMMGSTLGLVWQYTSTSVSENETSA------------------------- Zea_mays_GI|414886329 ------------MAPAPALTATSVLKRSHLPG--------VHSLACRR-QPG-ADRVSVLSPAIPPPRVSWQQGSGVVAKRLLWASASGSFEKDNIGEDAVLPS-QIA-----VENKVDFLKILKSANSIIPHIVLGSTILALVYPPSFTWFT----------TRYYAPALGFLMFAVGVNSSAKDFIEAIK---RPDAIAAGYIGQFVIKPLFGFLFGTLAVAVLNLPAALGAGIMLVSCVSGAQLSNYATFLTDPHMAPLSIVMTSLSTATAVFVTPTLSY---FLIGQKLPVDV---KGMMSSIVQIVV---------APIAAG-------LLLNRFLPRLCAAIQPFLPSMSVFVTALCVGS-PLAINIKAVLSPFGLT--------------IVLLLFAFHTSSFVAGYHLAGTWFRKSDDVK-----ALQRTISFETGMQSSLLALALANK----FFPDPLVGVPPAISVVLMSLMGFALVMVWSKKREA--------------------------------- ; END; [ The following blocks are output data for analysis step 18189 ] BEGIN TREES; TITLE pyruvate_transporter_TaBASS2; LINK TAXA = TaxaForAnalysisStep18189; TREE Default_symmetrical = [&R] (((((Triticum_aestivum_TaBASS2,Hordeum_vulgare_GI|326523177),(Oryza_sativa_Os02g27490,(Oryza_sativa_Os02g32930,Oryza_sativa_Os01g45750))),((Oryza_sativa_Os09g34900,Oryza_sativa_Os12g07270),(Oryza_sativa_Os04g31210,(Sorghum_bicolor_Sb01g016820,Sorghum_bicolor_Sb03g029420)))),(((Sorghum_bicolor_Sb02g030200,Sorghum_bicolor_Sb08g004520),(Sorghum_bicolor_Sb09g028950,(Zea_mays_GI|414878427,Zea_mays_GI|414886329))),((Flaveria_trinervia_GI|305682287,(Arabidopsis_thaliana_At2g26900,Arabidopsis_thaliana_At1g78560)),(Arabidopsis_thaliana_At3g25410,(Arabidopsis_thaliana_At3g56160,Arabidopsis_thaliana_At4g12030))))),((((Arabidopsis_thaliana_At4g22840,Thellungiella_halophila_GI|312281731),(Glycine_max_GI|356511623,(Vitis_vinifera_GI|147784076,Solanum_lycopersicum_GI|350537205))),((Picea_sitchensis_GI|116787201,Selaginella_moellendorffii_GI|226442063),(Selaginella_moellendorffii_GI|302786574,(Physcomitrella_patens_GI|162673571,Physcomitrella_patens_GI|162696749)))),(((Physcomitrella_patens_GI|162665804,Nostoc_spec._GI|17134393),(Nodularia_spumigena_GI|119509473,(Synechocystis_spec._GI|16330596,Saccharomyces_cerevisiae_ARR3))),((Mus_musculus_GI|42564250,(Homo_sapiens_GI|14270135,Oryctolagus_cuniculus_GI|3024224)),(Staphylococcus_aureus_GI|82751914,(Bacillus_subtilis_GI|16078995,Escherichia_coli_GI|75208242)))))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr95259] END;