#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 11, 2024; 15:39 GMT

TreeBASE (cc) 1994-2008

Study reference:
Gernandt D., Liston A., & Piñero D. 2003. Phylogenetics of Pinus Subsections Cembroides
and Nelsoniae Inferred from cpDNA Sequences. Systematic Botany, 28(4): 657-673.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1056]

[ The following blocks are input data for analysis step 1851 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep1851;
        DIMENSIONS NTAX=19;
        TAXLABELS
            Pinus_aristata
            Pinus_balfouriana
            Pinus_bungeana
            Pinus_californiarum
            Pinus_cembroides
            Pinus_culminicola
            Pinus_discolor
            Pinus_edulis
            Pinus_fallax
            Pinus_gerardiana
            Pinus_johannis
            Pinus_longaeva
            Pinus_maximartinezii
            Pinus_monophylla
            Pinus_nelsonii
            Pinus_pinceana
            Pinus_quadrifolia
            Pinus_remota
            Pinus_rzedowskii
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M673]

	TITLE ex_James_Malusa_1992;
	LINK TAXA = TaxaForAnalysisStep1851;
	DIMENSIONS NCHAR=20;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5" MISSING=- GAP= #;

MATRIX
[                                10        20      ]
[                                 .         .      ]
Pinus_aristata           00-2030-12412010-22-
Pinus_balfouriana        01-1240-00412011022-
Pinus_bungeana           {34}2-2311-10200102001-
Pinus_californiarum      24131220220110040201
Pinus_cembroides         4313012020{12}120010201
Pinus_culminicola        3223002-224120101200
Pinus_discolor           42121020212120110200
Pinus_edulis             33130120221120010201
Pinus_fallax             341312202201100{23}0201
Pinus_gerardiana         -5---5000-200102001-
Pinus_johannis           4211202-2{12}212011{01}200
Pinus_longaeva           00-2140-0{12}412011022-
Pinus_maximartinezii     5512450-0-412111020-
Pinus_monophylla         140302212201200{23}0201
Pinus_nelsonii           42105{34}0-0020-1010101
Pinus_pinceana           43123300002101{01}10201
Pinus_quadrifolia        2412222-22{34}120110201
Pinus_remota             24222021201110020201
Pinus_rzedowskii         -1--450-0-{23}02112022-
;
END;

[ The following blocks are output data for analysis step 1851 ]
BEGIN TREES;
      TITLE Tb6626;
      LINK TAXA = TaxaForAnalysisStep1851;
      TREE Fig._3 = [&R] (Pinus_bungeana,((((((Pinus_edulis,Pinus_californiarum,Pinus_fallax,Pinus_monophylla,Pinus_cembroides),Pinus_quadrifolia,Pinus_remota,Pinus_culminicola,(Pinus_discolor,Pinus_johannis)),(Pinus_aristata,Pinus_longaeva,Pinus_balfouriana)),Pinus_maximartinezii),Pinus_rzedowskii),(Pinus_pinceana,Pinus_nelsonii)),Pinus_gerardiana);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4213]


END;