#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 18, 2025; 7:34 GMT TreeBASE (cc) 1994-2008 Study reference: Karaman M., Boskovic E., Rakic M., Orlovic S., & Galovic V. 2016. An insight into phylogeographic variability in rDNA regions of three lignicolous fungal species. Fungal Biology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S19595] [ The following blocks are input data for analysis step 18756 ] BEGIN TAXA; TITLE TaxaForAnalysisStep18756; DIMENSIONS NTAX=36; TAXLABELS Fomitopsis_africana Fomitopsis_cajanderi Fomitopsis_officinalis Fomitopsis_pinicola_CHN Fomitopsis_pinicola_CHN2 Fomitopsis_pinicola_CHN3 Fomitopsis_pinicola_CHN4 Fomitopsis_pinicola_CHN5 Fomitopsis_pinicola_CZE Fomitopsis_pinicola_CZE2 Fomitopsis_pinicola_JPN Fomitopsis_pinicola_LTU Fomitopsis_pinicola_LTU2 Fomitopsis_pinicola_LVA Fomitopsis_pinicola_LVA2 Fomitopsis_pinicola_NOR Fomitopsis_pinicola_NOR2 Fomitopsis_pinicola_NOR3 Fomitopsis_pinicola_NOR4 Fomitopsis_pinicola_NOR5 Fomitopsis_pinicola_RUS Fomitopsis_pinicola_RUS2 Fomitopsis_pinicola_RUS3 Fomitopsis_pinicola_RUS4 Fomitopsis_pinicola_RUS5 Fomitopsis_pinicola_RUS6 Fomitopsis_pinicola_RUS7 Fomitopsis_pinicola_RUS8 Fomitopsis_pinicola_SWE Fomitopsis_pinicola_SWE2 Fomitopsis_pinicola_StaraPl Fomitopsis_pinicola_Tara Fomitopsis_pinicola_Tara2 Fomitopsis_pinicola_Tara3 Fomitopsis_pinicola_Tara4 Fomitopsis_pinicola_Tara5 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M37369] TITLE Fomitopsis_pinicola_ITS_alignment; LINK TAXA = TaxaForAnalysisStep18756; DIMENSIONS NCHAR=483; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Fomitopsis_africana ATCGTTG-TCCATCTTACACCTGTGCACTCTCTGTAGGATTGGC--TTGTGGTG----TGGAGTGCTTGTGCACTCT---ATGCTGTGTTGCCTTTCCTATGTCTTAACTCTACAAACTACTGTATATTGCAGAATGTCAATTGCATTGAATGCATTTATTGTACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAACTATCAACTCTAGTTGCTTGTGTAATCAGAGTTGGATGTGGAGGTTGTTTGC-----TGGGCCCACTTTGGTGTTCAGCTCCTCTTAAATTTATTAGCTTGAGCTCTTTGAGTGGATTGGCT---T--TGGTGTGATAA--TTGTCTG-CACCATGCTG Fomitopsis_cajanderi ATCATTC-TCCATTTCATACACCTGTGCACACACTGTAGGTCGGTTTGCGAGGTGGAGCCT-----TCATTGGC-----GTAGCTTTGTAGGCCTTCCTATGTTTTA---TCACAAACTACT---AGTTTAAAGAATGTCTATTGCGTGTAACGCATCTATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTATTGCC-----GGACTTC----ATTGTTTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGTGGATCAGCTTCGGTGTGATAATTGTCTACGCCGTTCT----GTGAAGCA Fomitopsis_officinalis CTCATTCCAAATTCTCATACACCTGTGCACATCCTGTA{GT}GTTTGGTTTGAG----T{GT}GCGGTCTCTTCGCGGAG-----ATTGCGGCTCGGCCTTTCCTATGTTATATATAAACTCTATA-----CAGTCTGCAGAATGTAAACCGCGTTTAACGCATTAAATACAACTTTCAGCAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACCCCCATCACCTTTGTTGGTGGTGTGTGGGCTTGGATTTGGAGGTTTTCTGCCGGACGGTCAAACGTTCGGCTCCTCTTGAATGCATTAGCTTGGACCTCTGTGTATCTTGCTCAATCC---GGTGTGATAGTTTTGTCTACGCTGGAGGGT Fomitopsis_pinicola_CHN ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACGCACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTCCTTTTGTGGATCAGCTTATCGGTGTGAT-AAAATGTCTACGCCGTTACTG Fomitopsis_pinicola_CHN2 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTCCTTTTGTGGATCAGCTTATCGGTGTGAT-AAAATGTCTACGCCGTTACTG Fomitopsis_pinicola_CHN3 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTCCTTTTGTGGATCAGCTTATCGGTGTGAT-AAAATGTCTACGCCGTTACTG Fomitopsis_pinicola_CHN4 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_CHN5 CTCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTACTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAAAAATGTCTACGCCGTTACTG Fomitopsis_pinicola_CZE ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_CZE2 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_JPN CTCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGGCCTTTTGATTGGAGTGGGGTCTTCATTGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCATACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTCCTTTTGTAAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAAAAATGTCTACGCCGTTACTG Fomitopsis_pinicola_LTU ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_LTU2 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_LVA ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_LVA2 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_NOR ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTA?GCCGTTACTG Fomitopsis_pinicola_NOR2 ATCATTA-TCCATCTCACACACCTGTGCACACACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_NOR3 ATCATTA-TCCATCTCACACACCTGTGCACACACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_NOR4 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_NOR5 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_RUS ATCATTA-TCCATCTCACACACCTGTGCACACACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_RUS2 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTACTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_RUS3 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_RUS4 CTCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAATTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTACTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAAAAATGTCTACGCCGTTACTG Fomitopsis_pinicola_RUS5 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAAAAATGTCTACGCCGTTACTG Fomitopsis_pinicola_RUS6 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCAT?GACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTT?AAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGC?CGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_RUS7 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_RUS8 ATCATTA-TCCATCTCACACACCTGTGCACACACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_SWE ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_SWE2 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_StaraPl ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTT{AT}AAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_Tara ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_Tara2 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTT{AT}AAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_Tara3 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTAAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_Tara4 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTTTAAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG Fomitopsis_pinicola_Tara5 ATCATTA-TCCATCTCACACACCTGTGCACATACTGTAGGTCGG-CTTTTGATTGGAGTGGGGTCTTCATCGACTCTGCTTTTTAGTTGGGGCCTTCCTATGTTTTA---TCACACACTACTTCAGTT{AT}AAAGAATGTCCTCTTGCGTCTAACGCATTTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCTATTTGCTTTTGTGAATAGAGCTTGGACTTGGAGGTTTATTG-----CCGGTAC----CTGTGATCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTTG-----TGGATCAGCTTATCGGTGTGATAA-AATGTCTACGCCGTTACTG ; END; [ The following blocks are output data for analysis step 18756 ] BEGIN TREES; TITLE Fomitopsis_pinicola_ITS; LINK TAXA = TaxaForAnalysisStep18756; TREE F_pinicola = [&R] (Fomitopsis_officinalis:0.21618864,(Fomitopsis_africana:0.21551466,(Fomitopsis_cajanderi:0.1363497,((Fomitopsis_pinicola_NOR2:0.0,(Fomitopsis_pinicola_NOR3:0.0,(Fomitopsis_pinicola_RUS:0.0,Fomitopsis_pinicola_RUS8:0.0)0.1430:0.0)0.1220:0.0)0.6520:5.3792E-4,((Fomitopsis_pinicola_CHN2:-4.9E-6,(Fomitopsis_pinicola_CHN:0.0023773,Fomitopsis_pinicola_CHN3:-9.5E-6)0.3920:4.9E-6)0.8850:0.00402197,((Fomitopsis_pinicola_RUS2:5.9803E-4,(Fomitopsis_pinicola_JPN:0.00600041,(Fomitopsis_pinicola_CHN5:2.09E-6,Fomitopsis_pinicola_RUS4:0.00236571)0.5600:0.00113686)0.5710:0.00177731)0.5920:0.00162601,(Fomitopsis_pinicola_RUS7:0.0,(Fomitopsis_pinicola_CHN4:0.0,(Fomitopsis_pinicola_LTU:0.0,(Fomitopsis_pinicola_LTU2:0.0,(Fomitopsis_pinicola_NOR:0.0,(Fomitopsis_pinicola_NOR4:0.0,(Fomitopsis_pinicola_NOR5:0.0,(Fomitopsis_pinicola_SWE:0.0,(Fomitopsis_pinicola_SWE2:0.0,(Fomitopsis_pinicola_CZE:0.0,(Fomitopsis_pinicola_CZE2:0.0,(Fomitopsis_pinicola_LVA:0.0,(Fomitopsis_pinicola_LVA2:0.0,(Fomitopsis_pinicola_StaraPl:0.0,(Fomitopsis_pinicola_Tara:0.0,(Fomitopsis_pinicola_Tara2:0.0,(Fomitopsis_pinicola_Tara3:0.0,(Fomitopsis_pinicola_Tara4:0.0,(Fomitopsis_pinicola_Tara5:0.0,(Fomitopsis_pinicola_RUS3:0.0,(Fomitopsis_pinicola_RUS5:0.0,Fomitopsis_pinicola_RUS6:0.0)0.0210:0.0)0.0030:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0000:0.0)0.0020:0.0)0.0090:0.0)0.3330:1.5265E-4)0.3960:5.8708E-4)0.5190:0.00118818)1.0000:0.05463975)0.7760:0.02329416)0.0000:6.7398E-4); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr97402] END;