#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 16:18 GMT TreeBASE (cc) 1994-2008 Study reference: Mihaljevic I., Popovic M., Zaja R., & Smital T. 2016. Phylogenetic, syntenic, and tissue expression analysis of slc22 genes in zebrafish (Danio rerio). BMC Genomics, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S19597] [ The following blocks are input data for analysis step 18757 ] BEGIN TAXA; TITLE TaxaForAnalysisStep18757; DIMENSIONS NTAX=214; TAXLABELS Anolis_carolinensis_Boit1 Anolis_carolinensis_Flipt1 Anolis_carolinensis_Oat1 Anolis_carolinensis_Oat2 Anolis_carolinensis_Oat3 Anolis_carolinensis_Oct1 Anolis_carolinensis_Oct2 Anolis_carolinensis_Oct3 Anolis_carolinensis_Oct6 Anolis_carolinensis_Octn1 Anolis_carolinensis_Orctl2 Anolis_carolinensis_Orctl3 Anolis_carolinensis_Slc22a23 Anolis_carolinensis_Slc22a31 Anolis_carolinensis_Urat1 Ciona_intestinalis_Flipt1 Ciona_intestinalis_Oct6a Ciona_intestinalis_Oct6b 'Ciona intestinalis Octn1/2a' 'Ciona intestinalis Octn1/2b' Ciona_intestinalis_Orctl2 Danio_rerio_Boit1 Danio_rerio_Flipt1 Danio_rerio_Oat1 Danio_rerio_Oat2a Danio_rerio_Oat2b Danio_rerio_Oat2c Danio_rerio_Oat2d Danio_rerio_Oat2e Danio_rerio_Oat3 Danio_rerio_Oct1 Danio_rerio_Oct2 Danio_rerio_Oct6 Danio_rerio_Octn1 Danio_rerio_Octn2 Danio_rerio_Octn3 Danio_rerio_Orctl2 Danio_rerio_Orctl3 Danio_rerio_Orctl4 Danio_rerio_Slc22a23 Danio_rerio_Slc22a31 Gadus_morhua_Boit1 Gadus_morhua_Flipt1 Gadus_morhua_Oat1 Gadus_morhua_Oat2 Gadus_morhua_Oat3 Gadus_morhua_Oct1 Gadus_morhua_Oct6 Gadus_morhua_Octn2 Gadus_morhua_Octn3 Gadus_morhua_Orctl3a Gadus_morhua_Orctl3b Gadus_morhua_Slc22a23a Gadus_morhua_Slc22a23b Gadus_morhua_Slc22a31 Gallus_gallus_Flipt1 Gallus_gallus_Oat2 Gallus_gallus_Oct1 Gallus_gallus_Oct2 Gallus_gallus_Oct3 Gallus_gallus_Oct6 Gallus_gallus_Octn1 Gallus_gallus_Orctl2 Gallus_gallus_Orctl3a Gallus_gallus_Orctl3b Gallus_gallus_Orctl4 Gallus_gallus_Slc22a23 Gasterosteus_aculeatus_Boit1 Gasterosteus_aculeatus_Oat1 Gasterosteus_aculeatus_Oat2b Gasterosteus_aculeatus_Oat2d Gasterosteus_aculeatus_Oat3 Gasterosteus_aculeatus_Oct1 Gasterosteus_aculeatus_Oct2 Gasterosteus_aculeatus_Oct6 Gasterosteus_aculeatus_Octn1 Gasterosteus_aculeatus_Octn2a Gasterosteus_aculeatus_Octn2b Gasterosteus_aculeatus_Octn2c Gasterosteus_aculeatus_Octn3 Gasterosteus_aculeatus_Orctl2 Gasterosteus_aculeatus_Orctl3 Gasterosteus_aculeatus_Slc22a23a Gasterosteus_aculeatus_Slc22a23b Gasterosteus_aculeatus_Slc22a31 Homo_sapiens_BOIT1 Homo_sapiens_FLIPT1 Homo_sapiens_OAT1 Homo_sapiens_OAT2 Homo_sapiens_OAT3 Homo_sapiens_OAT4 Homo_sapiens_OAT5 Homo_sapiens_OAT7 Homo_sapiens_OCT1 Homo_sapiens_OCT2 Homo_sapiens_OCT3 Homo_sapiens_OCT6 Homo_sapiens_OCTN1 Homo_sapiens_OCTN2 Homo_sapiens_ORCTL2 Homo_sapiens_ORCTL3 Homo_sapiens_ORCTL4 Homo_sapiens_SLC22A23 Homo_sapiens_SLC22A24 Homo_sapiens_SLC22A31 Homo_sapiens_URAT1 Homo_sapiens_UST6 Latimeria_chalumnae_Boit1 Latimeria_chalumnae_Flipt1 Latimeria_chalumnae_Oat1 Latimeria_chalumnae_Oat2a Latimeria_chalumnae_Oat2b Latimeria_chalumnae_Oat2c Latimeria_chalumnae_Oct1 Latimeria_chalumnae_Oct2 Latimeria_chalumnae_Oct6 Latimeria_chalumnae_Octn1 Latimeria_chalumnae_Octn2 Latimeria_chalumnae_Octn3 Latimeria_chalumnae_Orctl3 Latimeria_chalumnae_Slc22a23 Latimeria_chalumnae_Slc22a31 Mus_musculus_Boit1 Mus_musculus_Flipt1 Mus_musculus_Oat1 Mus_musculus_Oat2 Mus_musculus_Oat3 Mus_musculus_Oct1 Mus_musculus_Oct2 Mus_musculus_Oct3 Mus_musculus_Oct6 Mus_musculus_Octn1 Mus_musculus_Octn2a Mus_musculus_Octn2b Mus_musculus_Orctl2 Mus_musculus_Orctl3 Mus_musculus_Orctl4 Mus_musculus_Slc22a23 Mus_musculus_Urat1 Oncorhynchus_mykiss_Boit1a Oncorhynchus_mykiss_Boit1b Oncorhynchus_mykiss_Flipt1 Oncorhynchus_mykiss_Oat1 Oncorhynchus_mykiss_Oat2a Oncorhynchus_mykiss_Oat2b Oncorhynchus_mykiss_Oat2c Oncorhynchus_mykiss_Oat2d Oncorhynchus_mykiss_Oat2e Oncorhynchus_mykiss_Oat3 Oncorhynchus_mykiss_Oct1 Oncorhynchus_mykiss_Oct2 Oncorhynchus_mykiss_Octn2 Oncorhynchus_mykiss_Octn3a Oncorhynchus_mykiss_Octn3b Oncorhynchus_mykiss_Orctl3 Oncorhynchus_mykiss_Slc22a31 Oryzias_latipes_Boit1 Oryzias_latipes_Flipt1 Oryzias_latipes_Oat1 Oryzias_latipes_Oat2a Oryzias_latipes_Oat2e Oryzias_latipes_Oat3 Oryzias_latipes_Oct6 Oryzias_latipes_Octn1 Oryzias_latipes_Octn2a Oryzias_latipes_Octn2b Oryzias_latipes_Octn3 Oryzias_latipes_Orctl2 Oryzias_latipes_Orctl3 Oryzias_latipes_Orctl4 Oryzias_latipes_Slc22a23a Oryzias_latipes_Slc22a23b Oryzias_latipes_Slc22a31 Takifugu_rubripes_Boit1 Takifugu_rubripes_Flipt1 Takifugu_rubripes_Oct1 Takifugu_rubripes_Oct6 Takifugu_rubripes_Octn1 Takifugu_rubripes_Octn2 Takifugu_rubripes_Octn3 Takifugu_rubripes_Orctl2 Takifugu_rubripes_Orctl3a Takifugu_rubripes_Orctl3b Takifugu_rubripes_Orctl3c Takifugu_rubripes_Slc22a23a Takifugu_rubripes_Slc22a23b Takifugu_rubripes_Slc22a31 Tetraodon_nigroviridis_Boit1 Tetraodon_nigroviridis_Flipt1 Tetraodon_nigroviridis_Oat1 Tetraodon_nigroviridis_Oat2a Tetraodon_nigroviridis_Oat2b Tetraodon_nigroviridis_Oat2d Tetraodon_nigroviridis_Oat2e Tetraodon_nigroviridis_Oct1 Tetraodon_nigroviridis_Oct2 Tetraodon_nigroviridis_Oct6 Tetraodon_nigroviridis_Octn1a Tetraodon_nigroviridis_Octn1b Tetraodon_nigroviridis_Octn3 Tetraodon_nigroviridis_Orctl3a Tetraodon_nigroviridis_Orctl3b Tetraodon_nigroviridis_Orctl3c Tetraodon_nigroviridis_Orctl3d Tetraodon_nigroviridis_Orctl4 Tetraodon_nigroviridis_Slc22a23a Tetraodon_nigroviridis_Slc22a23b Tetraodon_nigroviridis_Slc22a31 Xenopus_laevis_Oat1 Xenopus_laevis_Oat3 Xenopus_laevis_Oct1 Xenopus_laevis_Octn1 Xenopus_laevis_Octn2 Xenopus_leavis_Oct6 ; END; BEGIN TREES; TITLE slc22_genes_in_zebrafish; LINK TAXA = TaxaForAnalysisStep18757; TREE Imported_tree_1 = [&R] ((Ciona_intestinalis_Orctl2:1.35453,((Danio_rerio_Orctl2:0.49853,(Oryzias_latipes_Orctl2:0.79676,(Gasterosteus_aculeatus_Orctl2:0.47143,Takifugu_rubripes_Orctl2:0.47385)0.95:0.21882)1.00:0.50497)0.99:0.40688,((Homo_sapiens_ORCTL2:0.7002,Mus_musculus_Orctl2:0.35249)1.00:0.60526,(Gallus_gallus_Orctl2:1.11571,Anolis_carolinensis_Orctl2:0.77163)0.94:0.25875)0.96:0.37843)0.94:0.74081):2.98727,(((Latimeria_chalumnae_Slc22a23:0.12941,((Anolis_carolinensis_Slc22a23:0.58263,(Gallus_gallus_Slc22a23:0.0664,(Homo_sapiens_SLC22A23:0.03404,Mus_musculus_Slc22a23:0.06382)1.00:0.08498)0.51:0.03875)0.98:0.14615,(((Tetraodon_nigroviridis_Slc22a23a:0.03979,Takifugu_rubripes_Slc22a23a:0.05108)0.88:0.03348,(Gasterosteus_aculeatus_Slc22a23a:0.07205,(Oryzias_latipes_Slc22a23a:0.04376,Gadus_morhua_Slc22a23a:0.06653)0.80:0.0158)0.80:0.02228)1.00:0.30307,(Danio_rerio_Slc22a23:0.2592,(Gadus_morhua_Slc22a23b:0.23462,(Oryzias_latipes_Slc22a23b:0.32498,(Gasterosteus_aculeatus_Slc22a23b:0.04553,(Tetraodon_nigroviridis_Slc22a23b:0.23475,Takifugu_rubripes_Slc22a23b:0.05757)1.00:0.28549)0.57:0.0598)0.09:0.04961)0.88:0.06316)0.88:0.09559)1.00:0.27407)0.62:0.13943)1.00:1.24862,((Homo_sapiens_SLC22A31:1.16697,(Anolis_carolinensis_Slc22a31:0.75843,(Latimeria_chalumnae_Slc22a31:0.63895,(Gadus_morhua_Slc22a31:0.38965,((Danio_rerio_Slc22a31:0.28984,Oncorhynchus_mykiss_Slc22a31:0.24682)0.93:0.0966,(Oryzias_latipes_Slc22a31:0.36489,(Gasterosteus_aculeatus_Slc22a31:0.17121,(Tetraodon_nigroviridis_Slc22a31:0.13892,Takifugu_rubripes_Slc22a31:0.13899)1.00:0.22398)0.85:0.09301)0.55:0.05047)0.51:0.04933)1.00:0.53567)0.64:0.11635)0.28:0.13911)0.99:0.37166,(Latimeria_chalumnae_Boit1:0.44101,((Anolis_carolinensis_Boit1:1.18198,(Homo_sapiens_BOIT1:0.0,Mus_musculus_Boit1:0.04542)1.00:0.99824)1.00:0.50108,(Danio_rerio_Boit1:0.21189,((Oncorhynchus_mykiss_Boit1a:0.0728,Oncorhynchus_mykiss_Boit1b:0.18152)1.00:0.11194,(Oryzias_latipes_Boit1:0.16769,((Gasterosteus_aculeatus_Boit1:0.11154,Gadus_morhua_Boit1:0.19567)0.93:0.04065,(Takifugu_rubripes_Boit1:0.12398,Tetraodon_nigroviridis_Boit1:0.44331)1.00:0.14009)0.73:0.00913)0.95:0.07906)0.79:0.1054)1.00:0.91012)0.86:0.16883)0.99:0.32566)0.03:0.11305)1.00:1.38645,((((Danio_rerio_Orctl4:0.58488,(Tetraodon_nigroviridis_Orctl4:0.58594,Oryzias_latipes_Orctl4:0.45733)0.97:0.1968)1.00:0.90844,((((Homo_sapiens_ORCTL4:0.55695,Mus_musculus_Orctl4:0.66524)1.00:1.14215,(Homo_sapiens_ORCTL3:0.27138,Mus_musculus_Orctl3:0.2619)1.00:0.62741)0.91:0.16931,(Anolis_carolinensis_Orctl3:0.65435,(Gallus_gallus_Orctl3b:0.28579,(Gallus_gallus_Orctl3a:0.0022,Gallus_gallus_Orctl4:0.00591)1.00:0.24989)1.00:0.32131)0.73:0.09788)0.96:0.17291,(Latimeria_chalumnae_Orctl3:0.5375,(Danio_rerio_Orctl3:0.43391,(Oncorhynchus_mykiss_Orctl3:0.6244,((Gadus_morhua_Orctl3a:0.51205,Gadus_morhua_Orctl3b:0.27416)1.00:0.2661,((Takifugu_rubripes_Orctl3c:0.3936,(Tetraodon_nigroviridis_Orctl3b:0.27152,(Tetraodon_nigroviridis_Orctl3c:0.32513,Tetraodon_nigroviridis_Orctl3d:0.25819)1.00:0.27285)0.90:0.20641)1.00:0.27374,((Gasterosteus_aculeatus_Orctl3:0.24852,Oryzias_latipes_Orctl3:0.31817)0.94:0.08786,(Takifugu_rubripes_Orctl3a:0.21612,(Takifugu_rubripes_Orctl3b:0.04351,Tetraodon_nigroviridis_Orctl3a:0.15412)0.62:0.05093)1.00:0.17665)0.96:0.10959)1.00:0.21094)0.96:0.14593)0.34:0.08693)1.00:0.34405)0.88:0.21609)0.96:0.23611)1.00:0.50284,(((((Homo_sapiens_OAT2:0.17878,Mus_musculus_Oat2:0.31382)1.00:0.99046,(Gallus_gallus_Oat2:0.37162,Anolis_carolinensis_Oat2:0.4452)0.96:0.21202)0.96:0.19415,((Latimeria_chalumnae_Oat2b:0.03205,Latimeria_chalumnae_Oat2c:0.10233)1.00:0.57534,(Latimeria_chalumnae_Oat2a:0.46267,(Danio_rerio_Oat2a:0.32506,(Oncorhynchus_mykiss_Oat2a:0.23931,(Tetraodon_nigroviridis_Oat2a:0.53166,Oryzias_latipes_Oat2a:0.2667)1.00:0.31743)0.47:0.09107)1.00:0.41144)0.53:0.10694)0.70:0.07887)0.90:0.14502,((Tetraodon_nigroviridis_Oat2e:0.66712,Oncorhynchus_mykiss_Oat2e:0.30936)0.99:0.19535,((Danio_rerio_Oat2e:0.52452,Oryzias_latipes_Oat2e:0.57001)0.96:0.1201,((Oncorhynchus_mykiss_Oat2b:0.30786,(Danio_rerio_Oat2b:0.52396,(Gasterosteus_aculeatus_Oat2b:0.41088,Tetraodon_nigroviridis_Oat2b:0.37763)0.99:0.16196)0.92:0.10263)0.97:0.10266,((Gadus_morhua_Oat2:0.54648,(Tetraodon_nigroviridis_Oat2d:0.43982,Gasterosteus_aculeatus_Oat2d:0.29541)0.66:0.10267)0.99:0.16265,((Oncorhynchus_mykiss_Oat2c:0.0582,Oncorhynchus_mykiss_Oat2d:0.22491)1.00:0.16298,(Danio_rerio_Oat2c:0.34733,Danio_rerio_Oat2d:0.34334)1.00:0.27276)0.88:0.0651)1.00:0.21797)0.66:0.04889)0.19:0.04206)1.00:0.2876)1.00:0.66142,((Anolis_carolinensis_Urat1:1.08608,((Homo_sapiens_OAT4:0.81366,(Homo_sapiens_URAT1:0.22861,Mus_musculus_Urat1:0.29388)1.00:0.44351)0.65:0.142,(Homo_sapiens_SLC22A24:0.5033,(Homo_sapiens_OAT5:0.44225,(Homo_sapiens_OAT7:0.32994,Homo_sapiens_UST6:0.24048)1.00:0.3613)0.27:0.05278)1.00:0.53112)1.00:0.35931)0.72:0.10687,(((Anolis_carolinensis_Oat3:0.53858,Xenopus_laevis_Oat3:0.56084)0.94:0.11317,((Anolis_carolinensis_Oat1:0.47766,(Homo_sapiens_OAT1:0.09236,Mus_musculus_Oat1:0.16482)1.00:0.63283)0.95:0.13266,(Xenopus_laevis_Oat1:0.63775,(Homo_sapiens_OAT3:0.26782,Mus_musculus_Oat3:0.28672)1.00:0.65763)0.93:0.10969)0.91:0.05584)0.49:0.06176,(Latimeria_chalumnae_Oat1:0.69721,((Danio_rerio_Oat3:0.24544,(Oncorhynchus_mykiss_Oat3:0.21787,(Gadus_morhua_Oat3:0.38562,(Gasterosteus_aculeatus_Oat3:0.20443,Oryzias_latipes_Oat3:0.16933)0.99:0.11816)0.90:0.09031)0.90:0.09149)1.00:0.40978,((Danio_rerio_Oat1:0.46029,Oncorhynchus_mykiss_Oat1:0.21462)0.88:0.13851,(Gadus_morhua_Oat1:0.28662,(Gasterosteus_aculeatus_Oat1:0.17078,(Tetraodon_nigroviridis_Oat1:0.26425,Oryzias_latipes_Oat1:0.26882)0.00:0.01991)0.99:0.13796)0.73:0.07662)1.00:0.49399)0.94:0.09737)0.89:0.07388)0.93:0.09503)1.00:0.6109)1.00:0.3862)0.95:0.20679,(((Ciona_intestinalis_Flipt1:1.70265,((Latimeria_chalumnae_Flipt1:0.33645,(Anolis_carolinensis_Flipt1:0.25695,(Gallus_gallus_Flipt1:0.11842,(Homo_sapiens_FLIPT1:0.06902,Mus_musculus_Flipt1:0.20006)0.97:0.12394)0.99:0.13556)0.99:0.18962)1.00:0.60982,(Gadus_morhua_Flipt1:0.44123,((Danio_rerio_Flipt1:0.34139,Oncorhynchus_mykiss_Flipt1:0.27381)0.88:0.10827,(Oryzias_latipes_Flipt1:0.18937,(Tetraodon_nigroviridis_Flipt1:0.19945,Takifugu_rubripes_Flipt1:0.10075)1.00:0.24891)0.99:0.16651)0.90:0.18741)0.99:0.55797)0.88:0.40158)1.00:0.93984,(Danio_rerio_Oct2:1.18251,((Latimeria_chalumnae_Oct2:0.33315,(Anolis_carolinensis_Oct3:0.45224,(Gallus_gallus_Oct3:0.2566,(Homo_sapiens_OCT3:0.08001,Mus_musculus_Oct3:0.16638)1.00:0.3546)0.15:0.0887)0.99:0.21032)0.98:0.23775,((Anolis_carolinensis_Oct2:0.49353,(Xenopus_laevis_Oct1:0.66018,((Anolis_carolinensis_Oct1:0.34369,(Gallus_gallus_Oct1:0.18749,Gallus_gallus_Oct2:0.27661)0.83:0.10194)0.90:0.09215,((Homo_sapiens_OCT2:0.20548,Mus_musculus_Oct2:0.11397)0.97:0.08493,(Homo_sapiens_OCT1:0.19236,Mus_musculus_Oct1:0.23991)1.00:0.26811)0.99:0.11977)0.65:0.0928)0.62:0.07649)1.00:0.31002,(Latimeria_chalumnae_Oct1:0.52616,(Danio_rerio_Oct1:0.36166,((Gadus_morhua_Oct1:0.21561,(Oncorhynchus_mykiss_Oct1:0.23299,Oncorhynchus_mykiss_Oct2:0.12123)0.99:0.10284)0.41:0.03422,((Gasterosteus_aculeatus_Oct1:0.36324,Gasterosteus_aculeatus_Oct2:0.15592)0.99:0.15058,(Tetraodon_nigroviridis_Oct1:0.77162,(Tetraodon_nigroviridis_Oct2:0.19674,Takifugu_rubripes_Oct1:0.10755)0.95:0.11781)0.83:0.06346)0.78:0.05702)0.92:0.08513)1.00:0.44142)0.94:0.12872)1.00:0.21454)0.85:0.14997)1.00:1.03076)0.15:0.05695,(((Ciona_intestinalis_Oct6a:1.32625,Ciona_intestinalis_Oct6b:1.86599)0.96:0.46229,((Homo_sapiens_OCT6:0.36996,Mus_musculus_Oct6:0.9635)0.98:0.27136,(Xenopus_leavis_Oct6:0.34713,((Gallus_gallus_Oct6:0.26603,Anolis_carolinensis_Oct6:0.21959)0.99:0.15086,(Latimeria_chalumnae_Oct6:0.33087,(Danio_rerio_Oct6:0.31472,(Gadus_morhua_Oct6:0.38384,(Oryzias_latipes_Oct6:0.23305,(Gasterosteus_aculeatus_Oct6:0.16661,(Tetraodon_nigroviridis_Oct6:0.09639,Takifugu_rubripes_Oct6:0.11674)1.00:0.21205)0.94:0.09387)0.35:0.10795)0.97:0.13694)1.00:0.52917)0.98:0.18402)0.77:0.09809)1.00:0.31036)1.00:1.18518)0.95:0.33004,(('Ciona intestinalis Octn1/2a':1.30951,'Ciona intestinalis Octn1/2b':1.38095)1.00:0.48142,((Danio_rerio_Octn1:0.48024,(Gasterosteus_aculeatus_Octn1:0.41721,(Takifugu_rubripes_Octn1:0.83696,Oryzias_latipes_Octn1:0.19304)0.63:0.08136)1.00:0.29711)1.00:0.3263,(((Gasterosteus_aculeatus_Octn2b:1.25367,(Tetraodon_nigroviridis_Octn1b:0.70928,(Gasterosteus_aculeatus_Octn2c:0.36191,Oryzias_latipes_Octn2b:0.58986)1.00:0.28262)0.92:0.13407)0.92:0.15023,(Gasterosteus_aculeatus_Octn2a:0.38683,((Oryzias_latipes_Octn2a:0.22885,(Tetraodon_nigroviridis_Octn1a:0.09622,Takifugu_rubripes_Octn2:0.07451)1.00:0.12408)1.00:0.17519,(Gadus_morhua_Octn2:0.40639,(Danio_rerio_Octn2:0.66495,Oncorhynchus_mykiss_Octn2:0.31361)0.95:0.09355)0.45:0.05935)1.00:0.35187)0.99:0.26622)0.96:0.16284,((Danio_rerio_Octn3:0.52261,((Oncorhynchus_mykiss_Octn3a:0.01518,Oncorhynchus_mykiss_Octn3b:0.05641)1.00:0.26387,(Gadus_morhua_Octn3:0.94925,(Gasterosteus_aculeatus_Octn3:0.40782,(Oryzias_latipes_Octn3:0.54538,(Tetraodon_nigroviridis_Octn3:0.09612,Takifugu_rubripes_Octn3:0.16954)1.00:0.55493)0.17:0.07015)0.94:0.12059)0.92:0.10766)0.97:0.11274)1.00:0.18785,(Latimeria_chalumnae_Octn1:0.37113,((Latimeria_chalumnae_Octn3:0.33999,Latimeria_chalumnae_Octn2:0.58885)0.92:0.0823,((Xenopus_laevis_Octn1:0.59355,Xenopus_laevis_Octn2:0.11933)1.00:0.16216,((Homo_sapiens_OCTN2:0.09591,(Mus_musculus_Octn2b:0.22289,Mus_musculus_Octn2a:0.05217)1.00:0.10128)1.00:0.13084,((Homo_sapiens_OCTN1:0.10304,Mus_musculus_Octn1:0.15512)1.00:0.10538,(Gallus_gallus_Octn1:0.2054,Anolis_carolinensis_Octn1:0.25674)0.99:0.10521)0.99:0.13135)0.98:0.11712)1.00:0.21958)0.22:0.05271)1.00:0.17425)0.34:0.07304)0.96:0.13134)1.00:0.75919)0.99:0.33264)0.84:0.13256)0.95:0.22872)0.84:0.54178):1.27349)1.00; [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr98793] END; [ The following blocks are output data for analysis step 18757 ] BEGIN TREES; TITLE slc22_genes_in_zebrafish; LINK TAXA = TaxaForAnalysisStep18757; TREE Imported_tree_1 = [&R] ((Ciona_intestinalis_Orctl2:1.35453,((Danio_rerio_Orctl2:0.49853,(Oryzias_latipes_Orctl2:0.79676,(Gasterosteus_aculeatus_Orctl2:0.47143,Takifugu_rubripes_Orctl2:0.47385)0.95:0.21882)1.00:0.50497)0.99:0.40688,((Homo_sapiens_ORCTL2:0.7002,Mus_musculus_Orctl2:0.35249)1.00:0.60526,(Gallus_gallus_Orctl2:1.11571,Anolis_carolinensis_Orctl2:0.77163)0.94:0.25875)0.96:0.37843)0.94:0.74081):2.98727,(((Latimeria_chalumnae_Slc22a23:0.12941,((Anolis_carolinensis_Slc22a23:0.58263,(Gallus_gallus_Slc22a23:0.0664,(Homo_sapiens_SLC22A23:0.03404,Mus_musculus_Slc22a23:0.06382)1.00:0.08498)0.51:0.03875)0.98:0.14615,(((Tetraodon_nigroviridis_Slc22a23a:0.03979,Takifugu_rubripes_Slc22a23a:0.05108)0.88:0.03348,(Gasterosteus_aculeatus_Slc22a23a:0.07205,(Oryzias_latipes_Slc22a23a:0.04376,Gadus_morhua_Slc22a23a:0.06653)0.80:0.0158)0.80:0.02228)1.00:0.30307,(Danio_rerio_Slc22a23:0.2592,(Gadus_morhua_Slc22a23b:0.23462,(Oryzias_latipes_Slc22a23b:0.32498,(Gasterosteus_aculeatus_Slc22a23b:0.04553,(Tetraodon_nigroviridis_Slc22a23b:0.23475,Takifugu_rubripes_Slc22a23b:0.05757)1.00:0.28549)0.57:0.0598)0.09:0.04961)0.88:0.06316)0.88:0.09559)1.00:0.27407)0.62:0.13943)1.00:1.24862,((Homo_sapiens_SLC22A31:1.16697,(Anolis_carolinensis_Slc22a31:0.75843,(Latimeria_chalumnae_Slc22a31:0.63895,(Gadus_morhua_Slc22a31:0.38965,((Danio_rerio_Slc22a31:0.28984,Oncorhynchus_mykiss_Slc22a31:0.24682)0.93:0.0966,(Oryzias_latipes_Slc22a31:0.36489,(Gasterosteus_aculeatus_Slc22a31:0.17121,(Tetraodon_nigroviridis_Slc22a31:0.13892,Takifugu_rubripes_Slc22a31:0.13899)1.00:0.22398)0.85:0.09301)0.55:0.05047)0.51:0.04933)1.00:0.53567)0.64:0.11635)0.28:0.13911)0.99:0.37166,(Latimeria_chalumnae_Boit1:0.44101,((Anolis_carolinensis_Boit1:1.18198,(Homo_sapiens_BOIT1:0.0,Mus_musculus_Boit1:0.04542)1.00:0.99824)1.00:0.50108,(Danio_rerio_Boit1:0.21189,((Oncorhynchus_mykiss_Boit1a:0.0728,Oncorhynchus_mykiss_Boit1b:0.18152)1.00:0.11194,(Oryzias_latipes_Boit1:0.16769,((Gasterosteus_aculeatus_Boit1:0.11154,Gadus_morhua_Boit1:0.19567)0.93:0.04065,(Takifugu_rubripes_Boit1:0.12398,Tetraodon_nigroviridis_Boit1:0.44331)1.00:0.14009)0.73:0.00913)0.95:0.07906)0.79:0.1054)1.00:0.91012)0.86:0.16883)0.99:0.32566)0.03:0.11305)1.00:1.38645,((((Danio_rerio_Orctl4:0.58488,(Tetraodon_nigroviridis_Orctl4:0.58594,Oryzias_latipes_Orctl4:0.45733)0.97:0.1968)1.00:0.90844,((((Homo_sapiens_ORCTL4:0.55695,Mus_musculus_Orctl4:0.66524)1.00:1.14215,(Homo_sapiens_ORCTL3:0.27138,Mus_musculus_Orctl3:0.2619)1.00:0.62741)0.91:0.16931,(Anolis_carolinensis_Orctl3:0.65435,(Gallus_gallus_Orctl3b:0.28579,(Gallus_gallus_Orctl3a:0.0022,Gallus_gallus_Orctl4:0.00591)1.00:0.24989)1.00:0.32131)0.73:0.09788)0.96:0.17291,(Latimeria_chalumnae_Orctl3:0.5375,(Danio_rerio_Orctl3:0.43391,(Oncorhynchus_mykiss_Orctl3:0.6244,((Gadus_morhua_Orctl3a:0.51205,Gadus_morhua_Orctl3b:0.27416)1.00:0.2661,((Takifugu_rubripes_Orctl3c:0.3936,(Tetraodon_nigroviridis_Orctl3b:0.27152,(Tetraodon_nigroviridis_Orctl3c:0.32513,Tetraodon_nigroviridis_Orctl3d:0.25819)1.00:0.27285)0.90:0.20641)1.00:0.27374,((Gasterosteus_aculeatus_Orctl3:0.24852,Oryzias_latipes_Orctl3:0.31817)0.94:0.08786,(Takifugu_rubripes_Orctl3a:0.21612,(Takifugu_rubripes_Orctl3b:0.04351,Tetraodon_nigroviridis_Orctl3a:0.15412)0.62:0.05093)1.00:0.17665)0.96:0.10959)1.00:0.21094)0.96:0.14593)0.34:0.08693)1.00:0.34405)0.88:0.21609)0.96:0.23611)1.00:0.50284,(((((Homo_sapiens_OAT2:0.17878,Mus_musculus_Oat2:0.31382)1.00:0.99046,(Gallus_gallus_Oat2:0.37162,Anolis_carolinensis_Oat2:0.4452)0.96:0.21202)0.96:0.19415,((Latimeria_chalumnae_Oat2b:0.03205,Latimeria_chalumnae_Oat2c:0.10233)1.00:0.57534,(Latimeria_chalumnae_Oat2a:0.46267,(Danio_rerio_Oat2a:0.32506,(Oncorhynchus_mykiss_Oat2a:0.23931,(Tetraodon_nigroviridis_Oat2a:0.53166,Oryzias_latipes_Oat2a:0.2667)1.00:0.31743)0.47:0.09107)1.00:0.41144)0.53:0.10694)0.70:0.07887)0.90:0.14502,((Tetraodon_nigroviridis_Oat2e:0.66712,Oncorhynchus_mykiss_Oat2e:0.30936)0.99:0.19535,((Danio_rerio_Oat2e:0.52452,Oryzias_latipes_Oat2e:0.57001)0.96:0.1201,((Oncorhynchus_mykiss_Oat2b:0.30786,(Danio_rerio_Oat2b:0.52396,(Gasterosteus_aculeatus_Oat2b:0.41088,Tetraodon_nigroviridis_Oat2b:0.37763)0.99:0.16196)0.92:0.10263)0.97:0.10266,((Gadus_morhua_Oat2:0.54648,(Tetraodon_nigroviridis_Oat2d:0.43982,Gasterosteus_aculeatus_Oat2d:0.29541)0.66:0.10267)0.99:0.16265,((Oncorhynchus_mykiss_Oat2c:0.0582,Oncorhynchus_mykiss_Oat2d:0.22491)1.00:0.16298,(Danio_rerio_Oat2c:0.34733,Danio_rerio_Oat2d:0.34334)1.00:0.27276)0.88:0.0651)1.00:0.21797)0.66:0.04889)0.19:0.04206)1.00:0.2876)1.00:0.66142,((Anolis_carolinensis_Urat1:1.08608,((Homo_sapiens_OAT4:0.81366,(Homo_sapiens_URAT1:0.22861,Mus_musculus_Urat1:0.29388)1.00:0.44351)0.65:0.142,(Homo_sapiens_SLC22A24:0.5033,(Homo_sapiens_OAT5:0.44225,(Homo_sapiens_OAT7:0.32994,Homo_sapiens_UST6:0.24048)1.00:0.3613)0.27:0.05278)1.00:0.53112)1.00:0.35931)0.72:0.10687,(((Anolis_carolinensis_Oat3:0.53858,Xenopus_laevis_Oat3:0.56084)0.94:0.11317,((Anolis_carolinensis_Oat1:0.47766,(Homo_sapiens_OAT1:0.09236,Mus_musculus_Oat1:0.16482)1.00:0.63283)0.95:0.13266,(Xenopus_laevis_Oat1:0.63775,(Homo_sapiens_OAT3:0.26782,Mus_musculus_Oat3:0.28672)1.00:0.65763)0.93:0.10969)0.91:0.05584)0.49:0.06176,(Latimeria_chalumnae_Oat1:0.69721,((Danio_rerio_Oat3:0.24544,(Oncorhynchus_mykiss_Oat3:0.21787,(Gadus_morhua_Oat3:0.38562,(Gasterosteus_aculeatus_Oat3:0.20443,Oryzias_latipes_Oat3:0.16933)0.99:0.11816)0.90:0.09031)0.90:0.09149)1.00:0.40978,((Danio_rerio_Oat1:0.46029,Oncorhynchus_mykiss_Oat1:0.21462)0.88:0.13851,(Gadus_morhua_Oat1:0.28662,(Gasterosteus_aculeatus_Oat1:0.17078,(Tetraodon_nigroviridis_Oat1:0.26425,Oryzias_latipes_Oat1:0.26882)0.00:0.01991)0.99:0.13796)0.73:0.07662)1.00:0.49399)0.94:0.09737)0.89:0.07388)0.93:0.09503)1.00:0.6109)1.00:0.3862)0.95:0.20679,(((Ciona_intestinalis_Flipt1:1.70265,((Latimeria_chalumnae_Flipt1:0.33645,(Anolis_carolinensis_Flipt1:0.25695,(Gallus_gallus_Flipt1:0.11842,(Homo_sapiens_FLIPT1:0.06902,Mus_musculus_Flipt1:0.20006)0.97:0.12394)0.99:0.13556)0.99:0.18962)1.00:0.60982,(Gadus_morhua_Flipt1:0.44123,((Danio_rerio_Flipt1:0.34139,Oncorhynchus_mykiss_Flipt1:0.27381)0.88:0.10827,(Oryzias_latipes_Flipt1:0.18937,(Tetraodon_nigroviridis_Flipt1:0.19945,Takifugu_rubripes_Flipt1:0.10075)1.00:0.24891)0.99:0.16651)0.90:0.18741)0.99:0.55797)0.88:0.40158)1.00:0.93984,(Danio_rerio_Oct2:1.18251,((Latimeria_chalumnae_Oct2:0.33315,(Anolis_carolinensis_Oct3:0.45224,(Gallus_gallus_Oct3:0.2566,(Homo_sapiens_OCT3:0.08001,Mus_musculus_Oct3:0.16638)1.00:0.3546)0.15:0.0887)0.99:0.21032)0.98:0.23775,((Anolis_carolinensis_Oct2:0.49353,(Xenopus_laevis_Oct1:0.66018,((Anolis_carolinensis_Oct1:0.34369,(Gallus_gallus_Oct1:0.18749,Gallus_gallus_Oct2:0.27661)0.83:0.10194)0.90:0.09215,((Homo_sapiens_OCT2:0.20548,Mus_musculus_Oct2:0.11397)0.97:0.08493,(Homo_sapiens_OCT1:0.19236,Mus_musculus_Oct1:0.23991)1.00:0.26811)0.99:0.11977)0.65:0.0928)0.62:0.07649)1.00:0.31002,(Latimeria_chalumnae_Oct1:0.52616,(Danio_rerio_Oct1:0.36166,((Gadus_morhua_Oct1:0.21561,(Oncorhynchus_mykiss_Oct1:0.23299,Oncorhynchus_mykiss_Oct2:0.12123)0.99:0.10284)0.41:0.03422,((Gasterosteus_aculeatus_Oct1:0.36324,Gasterosteus_aculeatus_Oct2:0.15592)0.99:0.15058,(Tetraodon_nigroviridis_Oct1:0.77162,(Tetraodon_nigroviridis_Oct2:0.19674,Takifugu_rubripes_Oct1:0.10755)0.95:0.11781)0.83:0.06346)0.78:0.05702)0.92:0.08513)1.00:0.44142)0.94:0.12872)1.00:0.21454)0.85:0.14997)1.00:1.03076)0.15:0.05695,(((Ciona_intestinalis_Oct6a:1.32625,Ciona_intestinalis_Oct6b:1.86599)0.96:0.46229,((Homo_sapiens_OCT6:0.36996,Mus_musculus_Oct6:0.9635)0.98:0.27136,(Xenopus_leavis_Oct6:0.34713,((Gallus_gallus_Oct6:0.26603,Anolis_carolinensis_Oct6:0.21959)0.99:0.15086,(Latimeria_chalumnae_Oct6:0.33087,(Danio_rerio_Oct6:0.31472,(Gadus_morhua_Oct6:0.38384,(Oryzias_latipes_Oct6:0.23305,(Gasterosteus_aculeatus_Oct6:0.16661,(Tetraodon_nigroviridis_Oct6:0.09639,Takifugu_rubripes_Oct6:0.11674)1.00:0.21205)0.94:0.09387)0.35:0.10795)0.97:0.13694)1.00:0.52917)0.98:0.18402)0.77:0.09809)1.00:0.31036)1.00:1.18518)0.95:0.33004,(('Ciona intestinalis Octn1/2a':1.30951,'Ciona intestinalis Octn1/2b':1.38095)1.00:0.48142,((Danio_rerio_Octn1:0.48024,(Gasterosteus_aculeatus_Octn1:0.41721,(Takifugu_rubripes_Octn1:0.83696,Oryzias_latipes_Octn1:0.19304)0.63:0.08136)1.00:0.29711)1.00:0.3263,(((Gasterosteus_aculeatus_Octn2b:1.25367,(Tetraodon_nigroviridis_Octn1b:0.70928,(Gasterosteus_aculeatus_Octn2c:0.36191,Oryzias_latipes_Octn2b:0.58986)1.00:0.28262)0.92:0.13407)0.92:0.15023,(Gasterosteus_aculeatus_Octn2a:0.38683,((Oryzias_latipes_Octn2a:0.22885,(Tetraodon_nigroviridis_Octn1a:0.09622,Takifugu_rubripes_Octn2:0.07451)1.00:0.12408)1.00:0.17519,(Gadus_morhua_Octn2:0.40639,(Danio_rerio_Octn2:0.66495,Oncorhynchus_mykiss_Octn2:0.31361)0.95:0.09355)0.45:0.05935)1.00:0.35187)0.99:0.26622)0.96:0.16284,((Danio_rerio_Octn3:0.52261,((Oncorhynchus_mykiss_Octn3a:0.01518,Oncorhynchus_mykiss_Octn3b:0.05641)1.00:0.26387,(Gadus_morhua_Octn3:0.94925,(Gasterosteus_aculeatus_Octn3:0.40782,(Oryzias_latipes_Octn3:0.54538,(Tetraodon_nigroviridis_Octn3:0.09612,Takifugu_rubripes_Octn3:0.16954)1.00:0.55493)0.17:0.07015)0.94:0.12059)0.92:0.10766)0.97:0.11274)1.00:0.18785,(Latimeria_chalumnae_Octn1:0.37113,((Latimeria_chalumnae_Octn3:0.33999,Latimeria_chalumnae_Octn2:0.58885)0.92:0.0823,((Xenopus_laevis_Octn1:0.59355,Xenopus_laevis_Octn2:0.11933)1.00:0.16216,((Homo_sapiens_OCTN2:0.09591,(Mus_musculus_Octn2b:0.22289,Mus_musculus_Octn2a:0.05217)1.00:0.10128)1.00:0.13084,((Homo_sapiens_OCTN1:0.10304,Mus_musculus_Octn1:0.15512)1.00:0.10538,(Gallus_gallus_Octn1:0.2054,Anolis_carolinensis_Octn1:0.25674)0.99:0.10521)0.99:0.13135)0.98:0.11712)1.00:0.21958)0.22:0.05271)1.00:0.17425)0.34:0.07304)0.96:0.13134)1.00:0.75919)0.99:0.33264)0.84:0.13256)0.95:0.22872)0.84:0.54178):1.27349)1.00; [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr98793] END;