#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 12, 2025; 18:42 GMT TreeBASE (cc) 1994-2008 Study reference: Gao R., Austin R.S., Amyot L., & Hannoufa A. 2016. Comparative transcriptome investigation of global gene expression changes caused by miR156 overexpression in Medicago sativa. BMC Genomics, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S19682] [ The following blocks are input data for analysis step 18894 ] BEGIN TAXA; TITLE TaxaForAnalysisStep18894; DIMENSIONS NTAX=42; TAXLABELS Arabidopsis_thaliana_AtSPL1 Arabidopsis_thaliana_AtSPL10 Arabidopsis_thaliana_AtSPL11 Arabidopsis_thaliana_AtSPL12 Arabidopsis_thaliana_AtSPL13 Arabidopsis_thaliana_AtSPL14 Arabidopsis_thaliana_AtSPL15 Arabidopsis_thaliana_AtSPL16 Arabidopsis_thaliana_AtSPL2 Arabidopsis_thaliana_AtSPL3 Arabidopsis_thaliana_AtSPL4 Arabidopsis_thaliana_AtSPL5 Arabidopsis_thaliana_AtSPL6 Arabidopsis_thaliana_AtSPL7 Arabidopsis_thaliana_AtSPL8 Arabidopsis_thaliana_AtSPL9 Glycine_max_GmSPL12b Glycine_max_GmSPL13 Glycine_max_GmSPL14 Glycine_max_GmSPL16 Glycine_max_GmSPL17 Glycine_max_GmSPL1a Glycine_max_GmSPL1b Glycine_max_GmSPL2 Glycine_max_GmSPL6 Glycine_max_GmSPL8 Glycine_max_GmSPL9 Glycine_max_GmSPL9b Medicago_sativa_MsSPL12 Medicago_sativa_MsSPL13 Medicago_sativa_MsSPL2 Medicago_sativa_MsSPL3 Medicago_sativa_MsSPL4 Medicago_sativa_MsSPL6 Medicago_sativa_MsSPL9 Medicago_truncatula_MtSPL14 Medicago_truncatula_MtSPL1a Medicago_truncatula_MtSPL1b Medicago_truncatula_MtSPL2 Medicago_truncatula_MtSPL6 Medicago_truncatula_MtSPL8 Medicago_truncatula_MtSPL9 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M39199] TITLE Differentially_expressed_SPL_genes_in_miR156OE_M._sativa_plants; LINK TAXA = TaxaForAnalysisStep18894; DIMENSIONS NCHAR=229; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ] [ . . . . . . . . . . . . . . . . . . . . . . ] Arabidopsis_thaliana_AtSPL1 TGTCAGGTCGAAAACTGTGAAGCTGATCTTAGTAAAGTTAAGGATTATCATAGACGCCATAAGGTCTGTGAGATGCATTCCAAGGCTACTAGTGCCACTGTCGGAGGTATCTTGCAGCGCTTTTGTCAGCAATGTAGTAGGTTCCATCTTCTTCAGGAGTTTGATGAAGGAAAGAGAAGTTGTCGTAGACGTTTGGCTGGCCATAATAAACGTCGGAGGAAAACAAAT- Arabidopsis_thaliana_AtSPL10 TGCCAAATTGATGGCTGTGAGCTGGATCTCTCATCTTCTAAGGATTATCATCGCAAGCATAGAGTCTGCGAAACGCATTCAAAGTGCCCAAAAGTTGTTGTGAGTGGCCTGGAACGTCGTTTCTGCCAACAGTGTAGCAGGTTCCATGCTGTCTCAGAATTTGATGAAAAGAAACGAAGCTGCCGCAAACGTCTTTCTCATCATAATGCAAGGCGTCGCAAGCCACAA- Arabidopsis_thaliana_AtSPL11 TGCCAAATTGATGGCTGTGAACTGGATCTCTCATCTGCTAAGGGTTATCATCGTAAGCACAAAGTCTGCGAAAAGCATTCAAAGTGCCCAAAAGTTAGCGTGAGTGGCCTGGAACGTCGGTTCTGCCAACAGTGTAGCAGGTTCCATGCTGTCTCTGAATTTGATGAGAAGAAACGAAGCTGCCGAAAACGTCTTTCTCATCATAATGCGAGGCGTCGTAAGCCACAA- Arabidopsis_thaliana_AtSPL12 TGTCAGGTAGACAACTGTGGAGCTGATTTAAGCAAAGTTAAGGATTATCATAGACGTCATAAGGTCTGTGAGATTCATTCTAAAGCTACTACTGCACTTGTTGGAGGAATTATGCAGCGGTTTTGTCAGCAATGTAGTAGGTTTCATGTGCTTGAAGAGTTTGATGAGGGAAAGAGAAGTTGCCGTAGACGTTTGGCTGGGCATAATAAGCGTAGAAGAAAAGCAAAT- Arabidopsis_thaliana_AtSPL13 TGTCTTGTTGATGGATGTGATTCTGATTTTAGTAATTGTAGAGAGTATCATAAGAGACATAAAGTTTGTGATGTTCATTCAAAAACTCCTGTGGTTACTATTAATGGTCATAAACAGAGGTTTTGTCAACAATGCAGCAGGTTTCATGCTTTGGAGGAGTTTGATGAAGGGAAGAGAAGTTGTAGGAAACGTCTTGATGGACATAATCGAAGACGACGGAAGCCGCAG- Arabidopsis_thaliana_AtSPL14 TGTCAGGTTGATAATTGTACTGAAGATTTGTCTCATGCTAAGGATTATCATAGAAGGCATAAAGTTTGTGAAGTTCATAGTAAAGCTACTAAAGCTCTTGTTGGTAAACAGATGCAGAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAGTTTGATGAGGGGAAGAGAAGTTGTAGGCGTAGATTGGCTGGCCATAATCGACGGAGGAGGAAAACTACG- Arabidopsis_thaliana_AtSPL15 TGCCAAGTGGAAGGTTGTAGAATGGATCTAAGCAATGTTAAAGCTTATTACTCGAGACACAAAGTTTGTTGCATTCACTCTAAATCATCTAAAGTCATTGTCTCTGGTCTTCATCAAAGGTTTTGTCAACAATGTAGCAGGTTTCACCAGCTTTCTGAGTTTGACTTGGAGAAAAGAAGTTGTCGCAGAAGACTCGCTTGTCATAACGAACGACGAAGAAAACCACAA- Arabidopsis_thaliana_AtSPL16 TGTCAGGTTGATAATTGTAAGGAAGATTTATCAATTGCTAAGGATTATCATAGAAGACATAAAGTTTGTGAGGTTCATAGCAAAGCTACTAAAGCTCTTGTTGGGAAACAGATGCAGAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAGTTTGATGAGGGGAAGAGAAGTTGTAGGCGTAGATTGGATGGTCATAACAGGCGGAGGAGAAAAACACAG- Arabidopsis_thaliana_AtSPL2 TGTCAAGTTGAAGGCTGTAATCTTGATCTTTCATCAGCTAAAGACTATCATCGGAAACATAGGATTTGTGAAAATCATTCAAAGTTTCCTAAAGTCGTTGTGAGTGGCGTAGAGCGTCGGTTCTGCCAACAATGTAGCAGGTTCCACTGTCTCTCTGAGTTTGATGAGAAGAAACGTAGCTGTCGCCGACGTCTCTCAGATCACAATGCAAGACGTCGCAAGCCAAAT- Arabidopsis_thaliana_AtSPL3 TGTCAGGTCGAGAGTTGTACCGCGGATATGAGCAAAGCCAAACAGTACCACAAACGACACAAAGTCTGCCAGTTTCATGCCAAAGCTCCTCATGTTCGGATCTCTGGTCTTCACCAACGTTTCTGCCAACAATGCAGCAGGTTTCACGCGCTCAGTGAGTTTGATGAAGCCAAGCGGAGTTGCAGGAGACGCTTAGCTGGACACAACGAGAGAAGGCGGAAAAGCACA- Arabidopsis_thaliana_AtSPL4 TGCCAAGTAGATAGATGCACAGCTGATATGAAAGAGGCAAAACTGTATCACCGGAGACACAAAGTGTGTGAAGTTCATGCAAAGGCATCTTCTGTCTTTCTCTCAGGACTTAACCAACGCTTTTGTCAACAATGCAGTAGGTTTCATGACCTCCAAGAGTTTGATGAAGCTAAGAGAAGTTGCAGGAGGCGCTTAGCTGGACACAATGAGCGAAGAAGGAAGAGCTCT- Arabidopsis_thaliana_AtSPL5 TGCCAGGTCGATAGGTGCACTGTTAATTTGACTGAGGCCAAGCAGTATTACCGCAGACACAGAGTATGTGAAGTACATGCAAAGGCATCTGCTGCGACTGTTGCAGGGGTCAGGCAACGCTTTTGTCAACAATGCAGCAGGTTTCATGAGCTACCAGAGTTTGATGAAGCTAAAAGAAGCTGCAGGAGGCGCTTAGCTGGACACAATGAGAGGAGGAGGAAGATCTCT- Arabidopsis_thaliana_AtSPL6 TGTCAAGTTTATGGGTGTAGTAAGGATCTGAGCTCTTCGAAAGATTACCACAAAAGGCATAGAGTTTGCGAGGCTCATTCGAAAACTTCTGTGGTCATAGTTAATGGTCTTGAACAGAGGTTTTGTCAACAGTGCAGCAGGTTTCATTTCCTCTCAGAGTTTGATGATGGCAAAAGAAGTTGCAGAAGGCGATTAGCCGGTCACAATGAACGAAGAAGGAAACCTGCA- Arabidopsis_thaliana_AtSPL7 TGTCAGGTTCCGGATTGTGAAGCGGATATTAGCGAGCTCAAAGGGTACCATAAGAGGCATAGGGTTTGTCTCCGTTGCGCTACCGCCAGCTTTGTTGTGCTTGATGGAGAGAATAAGAGATACTGTCAACAGTGTGGAAAGTTTCATTTGCTCCCGGACTTTGATGAAGGAAAACGCAGCTGTCGGAGAAAGCTAGAGCGTCACAACAACAGACGGAAAAGGAAACCT- Arabidopsis_thaliana_AtSPL8 TGCCAAGCAGAGGGATGCAACGCGGATCTGAGCCACGCGAAACACTACCACAGAAGGCACAAAGTGTGCGAATTCCACTCAAAAGCATCGACGGTTGTAGCCGCCGGACTAAGCCAAAGGTTTTGCCAGCAATGCAGCAGGTTCCATTTGCTGTCGGAATTCGACAACGGGAAACGGAGCTGCCGTAAGCGACTTGCTGACCATAACCGCCGCCGCCGTAAATGTCAC- Arabidopsis_thaliana_AtSPL9 TGCCAAGTGGAAGGTTGTGGGATGGATCTAACCAATGCAAAAGGTTATTACTCGAGACACCGAGTTTGTGGAGTGCACTCTAAAACACCTAAAGTCACTGTGGCTGGTATCGAACAGAGGTTTTGTCAACAGTGCAGCAGGTTTCATCAGCTTCCGGAATTTGACCTAGAGAAAAGGAGTTGCCGCAGGAGACTCGCTGGTCATAATGAGCGACGAAGGAAGCCACAG- Glycine_max_GmSPL12b TGTCAGGCAGAGATGTGTGGTGCTGATTTGACTGTTGCAAAGAGGTACCATCGCCGCCATAAGGTGTGTGAGCTTCATTCCAAGGCTCCTTCTGTGATGGTTGCAGGACTGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCAAGAGCTGGCAGAGTTTGATGAAGCTAAAAGAAGCTGCCGGAGACGCTTGGCCAGACATAACGAGCGGCGCCGGAAAAGCAAT- Glycine_max_GmSPL13 TGCCTTGTGGATGGGTGCAATTCAGATCTTAGCAATTGTAGAGATTATCATAGGCGCCATAAGGTGTGTGAGCTCCATTCCAAGACCCCAGAGGTCACAATTGGTGGCTTCAAGCAAAGGTTCTGCCAACAATGTAGCAGGTTCCATTCGCTGGAGCAATTTGATGAAAGAAAAAGAAGCTGCAGAAAACGTTTAGATGGACACAATAGAAGGAGAAGAAAGCCCCAG- Glycine_max_GmSPL14 TGCCAGGTGGACAACTGCAGAGAGGATCTGTCGAAGGCGAAGGACTATCACCGGAGACACAAGGTGTGTGAGGCTCATAGCAAGGCCTCCAAAGCGCTTCTCGCGAATCAAATGCAAAGATTCTGCCAGCAGTGTAGCAGGTTTCATCCTCTCTCGGAGTTTGATGAGGGGAAGCGGAGCTGCCGCCGGAGACTCGCCGGACACAACCGGCGCCGGCGGAAGACGCAG- Glycine_max_GmSPL16 TGTTCTGTTGATGGATGCAATTCTGACCTCAGTGATTGCAGAGATTATCACAGGCGCCATAGGGTCTGCGAAAAGCACTCCAAAACCCCGGTTGTGTTGGTGGGGGGGAAACAACAGAGGTTCTGCCAACAATGCAGCAGGTTTCATTCACTTGGGGAGTTTGATGAGGTTAAGAGGAGTTGTAGGAAACGGCTTGACGGGCATAACAGGCGCCGGAGGAAACCTCAG- Glycine_max_GmSPL17 TGTCAGGTTGCGGGCTGCAAAGTAGATCTGAGTGGTGCTAAGGCTTACTATTCTAGGCACAAAGTTTGTGCCATGCACTCCAAGTCCCCTACTGTCACTGTTGCTGGTTTGGAGCAAAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAATTTGATCAAGGAAAACGTAGCTGCCGCAAGCGACTTGCTGGCCATAATGAGCGCCGACGAAAGCCCCCA- Glycine_max_GmSPL1a TGTCAAGTTGATGGTTGTAGCGCTGATCTAAGTGAAGCTAAGCCCTACCATAGGCGTCACAAGGTTTGTGAGTACCATGCCAAGGCTCCTGCCGTACTCATTGGAGACCAGCACCAACGGTTTTGCCAACAATGTAGTAGGTTTCATGAGCTATCAGAATTCGATGACTCAAAAAGGAGTTGCAGAAGACGTTTGGCTGGACATAATGAGAGGCGTCGCAAAAATGCA- Glycine_max_GmSPL1b TGCCAAGTGGACAATTGTGATGCTGATCTGAGTGAAGCTAAGCAGTACCACAGAAGACACAAGGTTTGTGAGTACCATGCCAAGGCTCCTTCCGTACACATGGCAGGGCTGCAACAAAGGTTTTGCCAACAATGTAGCAGATTCCATGTGCTATCAGAATTTGATGACTCAAAGAGGAGTTGTAGAACGCGGTTGGCTGGGCATAATGAGAGGCGTCGCAAATATGCA- Glycine_max_GmSPL2 TGTCAGGCAGAGATATGTGGTGCTGATTTGACTGTTGCAAAGAGGTACCATCGCCGTCATAAGGTGTGTGAGCTTCATTCCAAGGCTCCTTCTGTGATGGTTGCAGGACTGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGAGCTGGCAGAGTTTGATGAAGCTAAAAGAAGCTGCCGGAGACGCTTGGCCAGACACAACGAGCGGCGCCGGAAAAGCAAC- Glycine_max_GmSPL6 TGTCAAGTTTATGGTTGTAACATGGATCTTAGCTCCTCAAAAGATTACCACAAAAGGCATAAAGTTTGTGATGCTCACTCCAAAACAGCTAAAGTTATTGTAAATGGAATTGAACAGAGGTTTTGTCAGCAGTGCAGCAGGTTTCATTTGCTAGCTGAGTTCGATGATGGTAAGCGCAGTTGTCGCAGGCGTCTAGCAGGACACAATGAACGCCGAAGGAAACCCCAA- Glycine_max_GmSPL8 TGCCAGGCCGAGGGTTGCAATGCTGATCTGTCGCAAGCCAAGCACTATCACCGCCGCCACAAGGTGTGCGAGTTTCACTCCAAAGCCGCCACCGTCATCGCCGCCGGCTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTCCATCTTCTTTCTGAGTTTGATAACGGAAAACGTAGCTGCAGGAAGAGATTGGCAGATCATAATCGCCGCAGAAGAAAAACTCAA- Glycine_max_GmSPL9 TGTCAGGTTGAGGGCTGCAAAGTAGATCTGAGTGGTGCTAAGGCTTACTATTCTAGGCACAAAGTTTGTACCATGCACTCCAAGTTCCCTACTGTTATTGTTGCTGGTTTGGAGCAAAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAATTTGATGAAGGAAAACGAAGCTGCCGCAGGCGACTTGCTGGTCATAATGAGCGCCGACGAAAGCCCCCG- Glycine_max_GmSPL9b TGTCAAGTTGAAGGGTGCAAAGTAGATCTGAGTGATGCAAAAGCTTACTATTCTAGACACAAGGTCTGTGGCATGCACTCTAAATCCCCTTCAGTCATTGTTGCTGGTCTTCAACAAAGGTTTTGTCAACAGTGTAGCAGGTTTCATCAGCTTCCTGAGTTTGATCAAGGAAAAAGAAGTTGCCGTAGGCGACTAGCTGGCCATAATGAACGTCGGAGAAAGCCCCCA- Medicago_sativa_MsSPL12 TGCCAGGTGGAAGGTTGTGGCCTCGACCTCTCTTTGGCTAAAGATTACCATCGGAAACATAGAATTTGTGACAGTCATTCCAAATCGCCTGTGGTGGTAGTAGCTGGTTTGGAGCGTCGATTTTGCCAGCAGTGTAGCAGGTTCCATGATCTCTCAGAGTTTGATGATAAAAAAAGAAGCTGCAGACGCCGTCTTTCAGATCACAATGCAAGGCGTCGCAAACCTCAG- Medicago_sativa_MsSPL13 TGTCTTGTGGATGGGTGCAATTCTGATCTTAGTAATTGTAGAGATTATCATAGGCGTCATAAGGTTTGTGAACTTCATTCTAAGACTCCAGAGGTTACAATTTGTGGCCTTAAACAAAGGTTCTGCCAACAGTGTAGCAGGTTTCATTCGCTGGAGCAATTTGATGAAAGAAAAAGAAGCTGTAGGAAACGTTTAGATGGACACAACCGAAGAAGAAGAAAACCACAG- Medicago_sativa_MsSPL2 TGCCAAGCAGAGAGGTGTGGAGCTGATTTGACGGATGCAAAGAGATACCATCGCCGCCATAAAGTGTGTGAGTTTCATTCCAAGGCACCTGTTGTGGTGGTTGCAGGGATGAGGCAGAGGTTTTGTCAACAATGTAGCAGGTTCCATGACTTGGTAGAGTTTGATGAGTCTAAAAGAAGCTGCCGCAGGCGGTTGGCTGGACACAATGAACGGCGCCGGAAAACCAAC- Medicago_sativa_MsSPL3 TGTCAAGTTGATAACTGTAATGCTGATCTAAGTGTTGCTAAGCAGTACCATAAGCGCCATAAGGTTTGTGAATACCATTCTAAGGCTCATTCCGTACTCATTTCAGAGCTTCAACAAAGGTTTTGCCAGCAATGTAGCAGGTTTCATGAGGTATCAGAATTTGATGACTTGAAAAGGAGTTGTAGGAGGCGTTTGGCTGGACATAACGAGAGGCGCCGCAAAAGCACG- Medicago_sativa_MsSPL4 TGTCAAGTGGAGAATTGTGATGCTGATCTTAGTGAAGCTAAGCAATATCACCGGAGACATAAGGTCTGTGAGTATCATGCCAAAGCACCTACCGTACACATTGCAGGATTGCAGCAAAGGTTTTGTCAGCAATGTAGCAGATTCCATGGACTATCTGAATTTGATGACTCAAAAAGAAGTTGCAGAAGGCGTTTGGCTGGGCATAATGAGAGGCGCCGCAAAAGTGCA- Medicago_sativa_MsSPL6 TGCCAAGTTTATGGTTGTAACATGGATCTTAGCTCCTCGAAAGATTACCACAAAAGGCATAAAGTTTGTGACGTTCACTCCAAGACAGCTAAAGTTATCGTCAATGGTGTTGAACAGAGGTTTTGTCAGCAGTGCAGCAGGTTCCATCTGGTAACTGAGTTCGACGATGGTAAGCGCAGTTGTCGCAGGCGTCTAGCTGGACACAATGAGCGCCGAAGGAAACCTCAG- Medicago_sativa_MsSPL9 TGTCAAGTTGAAGGATGTAAACTAGATCTGACTGATGCTAAAGCTTACTATTCTAGACACAAAGTTTGTAGCATGCACTCTAAGTGCCCAACTGTTACTGTTTCTGGTCTACAACAAAGGTTTTGTCAACAATGTAGCAGATTTCATCAGCTTGCTGAGTTTGATCAAGGAAAAAGAAGTTGCCGGAGACGACTAGCTGGTCATAACGAGCGTCGCAGAAAGCCCCCA- Medicago_truncatula_MtSPL14 TGTCTTGTGGATGGGTGCAATTCTGATCTTAGTAATTGTAGAGATTATCATAGGCGTCATAAGGTTTGTGAACTTCATTCCAAGACTCCAGAGGTTACAATTTGTGGCCTTAAACAAAGGTTCTGCCAACAGTGTAGCAGGTTTCATTCACTGGAGCAATTTGATGAAAGAAAAAGAAGTTGTAGGAAACGTTTAGATGGACACAACCGAAGGAGAAGAAAACCTCAA- Medicago_truncatula_MtSPL1a TGTCAGGTGGAGGATTGTCGCGCAGATCTTAACAACGCGAAAGATTATCACCGACGTCATAAAGTTTGTGAGATACATTCAAAGGCTAGTAAAGCCCTTGTCGGAAATGCGATGCAGCGGTTCTGCCAACAATGTAGTAGGTTTCACTTGCTTCAAGAGTTTGATGAAGGAAAGAGAAGCTGTCGAAGACGTTTGGCAGGCCATAATAAAAGGAGGAGAAAAACAAAT- Medicago_truncatula_MtSPL1b TGTCAGGTTGAAGACTGTGGTGCAGATCTGAGTAGAGGCAAGGATTATCACAGACGTCATAAAGTTTGTGAGATGCATTCTAAGGCTAGTAGGGCTCTTGTGGGAAATGCAATGCAGAGGTTTTGTCAACAGTGTAGTAGGTTTCACATACTTGAAGAGTTCGATGAAGGAAAGAGAAGCTGTCGAAGACGCTTGGCTGGCCATAACAAACGTAGAAGGAAAACAAAT- Medicago_truncatula_MtSPL2 TGCCAGGTGGAAGGTTGTGGCCTCGACCTCTCTTTTGCTAAAGATTACCATCGGAAACATAGAATTTGTGACAGTCATTCCAAATCGCCTGTGGTGGTAGTAGCTGGTTTGGAGCGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGATCTCTCAGAGTTTGATGATAAAAAAAGAAGCTGCAGACGCCGTCTTTCAGATCACAATGCAAGGCGTCGCAAACCTCAG- Medicago_truncatula_MtSPL6 TGCCAAGTTTATGGTTGTAATATGGATCTTAGCTCCTCGAAAGATTACCACAAAAGGCATAAAGTTTGTGATGTTCACTCCAAGACAGCTAAAGTTATCGTCAATGGTGTTGAACAGAGGTTTTGTCAGCAGTGCAGCAGGTTCCATCTAGTAGCTGAGTTCGACGATGGTAAGCGCAGTTGTCGCAGGCGTCTAGCTGGACACAATGAGCGCCGAAGGAAACCTCAG- Medicago_truncatula_MtSPL8 TGTCAAGCCGAAGGTTGCAATGCTGATCTATCTCAGGCTAAGCATTACCACCGCCGCCACAAAGTTTGTGAGTTTCACTCGAAGGCAGCCACCGTCGTTGCAGCTGGGTTGACTCAGCGGTTCTGCCAGCAATGCAGCAGGTTCCATCTTCTATCTGAGTTTGATAATGGAAAACGTAGCTGCAGGAAGAGATTGGCTGATCATAATCGTCGTAGGAGAAAAACTCAG- Medicago_truncatula_MtSPL9 TGTCAAGTTGAAGGATGTAAACTAGATCTGACTGATGCTAAAGCTTACTATTCTAGACACAAAGTTTGTAGCATGCACTCTAAATCCCCTACTGTTACTGTTTCTGGTCTTCAACAAAGGTTTTGTCAACAATGTAGCAGATTTCATCAGCTTGCTGAGTTTGATCAAGGAAAAAGAAGTTGTCGGAGACGACTAGCTGGTCATAATGAGCGTCGCAGAAAGCCCCCA- ; END; [ The following blocks are output data for analysis step 18894 ] BEGIN TREES; TITLE Differentially_expressed_SPL_genes_in_miR156OE_M._sativa_plants; LINK TAXA = TaxaForAnalysisStep18894; TREE Fig._6 = [&R] ((Glycine_max_GmSPL14:0.16457,(Arabidopsis_thaliana_AtSPL8:0.14308,(Glycine_max_GmSPL8:0.06861,Medicago_truncatula_MtSPL8:0.05419):0.06964):0.03427):0.010225,((((Arabidopsis_thaliana_AtSPL14:0.03471,Arabidopsis_thaliana_AtSPL16:0.04018):0.08067,((Arabidopsis_thaliana_AtSPL1:0.07248,Arabidopsis_thaliana_AtSPL12:0.06787):0.02375,(Medicago_truncatula_MtSPL1a:0.07781,Medicago_truncatula_MtSPL1b:0.08009):0.02888):0.02878):0.04165,((Arabidopsis_thaliana_AtSPL3:0.14208,(Arabidopsis_thaliana_AtSPL4:0.08493,Arabidopsis_thaliana_AtSPL5:0.0905):0.0531):0.01876,((Medicago_sativa_MsSPL2:0.07333,(Glycine_max_GmSPL2:0.01017,Glycine_max_GmSPL12b:0.01176):0.05824):0.0741,((Glycine_max_GmSPL1a:0.08485,Medicago_sativa_MsSPL3:0.0862):0.00692,(Glycine_max_GmSPL1b:0.06939,Medicago_sativa_MsSPL4:0.06219):0.02597):0.05748):0.00728):0.02175):0.00175,((Arabidopsis_thaliana_AtSPL7:0.25387,(Glycine_max_GmSPL16:0.15436,(Arabidopsis_thaliana_AtSPL13:0.10673,(Glycine_max_GmSPL13:0.05368,(Medicago_sativa_MsSPL13:0.01368,Medicago_truncatula_MtSPL14:0.01263):0.03623):0.06213):0.01888):0.04382):0.00554,(((Medicago_sativa_MsSPL12:0.00559,Medicago_truncatula_MtSPL2:0.00318):0.11981,(Arabidopsis_thaliana_AtSPL2:0.09972,(Arabidopsis_thaliana_AtSPL10:0.03649,Arabidopsis_thaliana_AtSPL11:0.03368):0.07572):0.02602):0.07391,((Arabidopsis_thaliana_AtSPL6:0.09529,(Glycine_max_GmSPL6:0.0375,(Medicago_sativa_MsSPL6:0.00853,Medicago_truncatula_MtSPL6:0.00901):0.03268):0.06017):0.05307,((Arabidopsis_thaliana_AtSPL9:0.08758,Arabidopsis_thaliana_AtSPL15:0.08347):0.04884,((Glycine_max_GmSPL9:0.01866,Glycine_max_GmSPL17:0.0252):0.05852,(Glycine_max_GmSPL9b:0.04761,(Medicago_sativa_MsSPL9:0.01718,Medicago_truncatula_MtSPL9:0.00914):0.04449):0.02536):0.0345):0.03303):0.00652):0.0101):0.00949):0.010225); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr100242] END;