#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 03, 2026; 12:00 GMT TreeBASE (cc) 1994-2008 Study reference: Seah B.K., Schwaha T., Volland J., Huettel B., Dubilier N., & Gruber-vodicka H. 2017. Specificity in diversity – single origin of a widespread ciliate-bacteria symbiosis. Proceedings of the Royal Society B: Biological Sciences, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S19762] [ The following blocks are input data for analysis step 19011 ] BEGIN TAXA; TITLE TaxaForAnalysisStep19011; DIMENSIONS NTAX=115; TAXLABELS 'Alkalilimnicola ehrlichii MLHE-1' Alkalispirillum_mobile Allochromatium_vinosum_DSM_180 Aquicella_lusitana Aquisalimonas_asiatica Arenimonas_malthae Arhodomonas_aquaeolei Beggiatoa_alba_B18LD Caedibacter_taeniospiralis Candidatus_Endorifita_persephone_ex_Riftia_pachyptila Candidatus_Ruthia_magnifica_str._Cm_ex_Calyptogena_magnifica Candidatus_Thiobios_zoothamnicoli_ex_Zoothamnium_niveum Cardiobacterium_hominis_ATCC_15826 Chromatium_okenii Coxiella_burnetii Dichelobacter_nodosus_VCS1703A Diplorickettsia_massiliensis Ectothiorhodosinus_mongolicus Ectothiorhodospira_shaposhnikovii Fluoribacter_dumoffii Francisella_philomiragia Gamma_3_endosymbiont_ex_Olavius_algarvensis Gamma1_endosymbiont_ex_Olavius_algarvensis Gamma1_endosymbiont_ex_Olavius_crassitunicatus Halochromatium_glycolicum Halorhodospira_halophila_SL1 Halorhodospira_neutriphila Halothiobacillus_kellyi Halothiobacillus_neapolitanus Lamprocystis_purpurea Lamprocystis_roseopersicina Legionella_wadsworthii Leucothrix_mucor Luteimonas_aestuarii Lysobacter_koreensis Methylobacter_whittenburyi Methylocaldum_szegediense Methylococcus_capsulatus Methylomicrobium_agile Methylomonas_aurantiaca Methylomonas_methanica Methylophaga_thalassica Methylosphaera_hansonii Natronocella_acetinitrilica Nitrococcus_mobilis Nitrosococcus_halophilus Nitrosococcus_oceani Piscirickettsia_salmonis Pseudoxanthomonas_spadix Rhabdochromatium_marinum Rheinheimera_chironomi Sedimenticola_selenatireducens Stenotrophomonas_maltophilia Sulfurivirga_caldicuralii Suttonella_ornithocola Tatlockia_maceachernii Thioalkalibacter_halophilus Thioalkalispira_microaerophila Thioalkalivibrio_denitrificans Thioalkalivibrio_jannaschii Thiocapsa_roseopersicina Thiococcus_pfennigii Thiocystis_violascens_DSM198 Thiodictyon_bacillosum Thiohalocapsa_halophila Thiohalophilus_thiocyanatoxydans Thiophaeococcus_mangrovi Thioprofundum_hispidum Thiorhodococcus_minor Thiorhodospira_sibirica_ATCC_700588 Thiorhodovibrio_winogradskyi Thiothrix_flexilis Thiotrophic_ectosymbiont_of_Kentrophoros_sp._BT_S243 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FB_S136 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FBG_S435 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FM_BZ176 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FW_BZ106 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FW_BZ131 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._G_BZ185 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._H_SA2B15 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._LFY_BY7 'Thiotrophic ectosymbiont of Kentrophoros sp. LPFa_S313' Thiotrophic_ectosymbiont_of_Kentrophoros_sp._SD_S127 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._TC_BZ126 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._TUN_BY2 Thiotrophic_ectosymbiont_of_Kentrophoros_sp._UNK_BY8 Xanthomonas_perforans Xanthomonas_theicola Xylella_fastidiosa endosymbiont_ex_Escarpia_spicata endosymbiont_ex_Ifremeria_nautilei endosymbiont_of_Lamellibrachia_columna gamma_proteobacterium_ectosymbiont_ex_Rimicaris_exoculata gill_endosymbiont_ex_Alviniconcha_hessleri gill_symbiont_of_Solemya_reidi thioautotrophic_gill_symbiont_ex_Bathymodiolus_azoricus thiotrophic_bacterial_endosymbiont_ex_Bathymodiolus_heckerae thiotrophic_endosymbiont_of_Bathymodiolus_mauritanicus uncultivated_environmental_bacteria_AB694061.1.1406 uncultivated_environmental_bacteria_DQ513032.1.1504 uncultivated_environmental_bacteria_EU652572.1.1506 uncultivated_environmental_bacteria_FJ905747.1.1417 uncultivated_environmental_bacteria_FN553505.1.1500 uncultivated_environmental_bacteria_HE817831.1.1534 uncultivated_environmental_bacteria_JF272102.1.1499 uncultivated_environmental_bacteria_JF344142.1.1499 uncultivated_environmental_bacteria_JF344692.1.1512 uncultivated_environmental_bacteria_JF809744.1.1399 uncultivated_environmental_bacteria_JN977228.1.1533 uncultivated_environmental_bacteria_JQ347371.1.1498 uncultivated_environmental_bacteria_JQ800923.1.1507 uncultivated_environmental_bacteria_JQ800972 uncultivated_environmental_bacteria_JX504483.1.1538 uncultivated_environmental_bacteria_KC009908.1.1512 uncultured_gill_symbiont_ex_Codakia_orbicularis ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M37877] TITLE Symbiont_of_Kentrophoros_16S_rRNA; LINK TAXA = TaxaForAnalysisStep19011; DIMENSIONS NCHAR=1734; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 1750 1760 1770 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Alkalilimnicola ehrlichii MLHE-1' -----------------------------ATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAGCGGTAACA---------------------------GGC----------------------------------------------------------------------CCTTCG-------GGGTGCTGACGAGCGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCTTC-GGTGGGGGATAGCCCGGGGAAACTCGGATTAATACCGCATACGCCCTAC-----------------GGGGCAAAGTGGC-----CCTCTG-------ATT------C--AAGGTCACGCCGAGG-GATGAGCCCGCGTCCGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCGGTAGCTGGTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGCAGGGAGGAAAAGCTTACGG-TTAATAGCCGT-GGGT-CTTGACGTTACCTGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTCGGTAAGTCGGGTGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATCCGATACTGTCGGGCT-AGAGTCTGGTAGAGGGCA?TGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACACCAGTGGCGAAGG--CGACTGCCTGGACCAAGACTGACGCTGAGGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGAACTAGCCGTTGGGTTCATT-------T-ATGGACTTAGTGGCGCAGCTAACGCATTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACCAGCCAGAGATGGCTGGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTTGCCAAGC--CGCGAGGTGGAGCTAATCCCAGAAAGCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGCAATGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGCTGCACCAGAAGCAGGTAGTCTAACCTTC------GGGAGGGCGCCT-GCCACGGTGTGGTCGATGACTGGGGTG---------------------------------------------------- Alkalispirillum_mobile -----------------------------ATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAGCGGCAGCAGCA-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCTGGCTGGCGAGCGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCTTC-GGTGGGGGATAGCCCGGGGAAACTCGGATTAATACCGCATACGCCCTAC-----------------GGGGCAAAGTGGC-----CCTCTG-------ATT------C--AAGGTCACGCCGAAG-GATGAGCCCGCGTCCGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCGGTAGCTGGTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGCAGGGAGGAAAAGCTTACGG-TTAATACCCGT-GAGT-CTTGACGTTACCTGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTCGATAAGTCGGGTGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATCCGATACTGTCGGGCT-AGAGTCTGGTAGAGGGAAGTGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACACCAGTGGCGAAGG--CGACTTCCTGGACCAAGACTGACGCTGAGGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGAACTAGCCGTTGGGCTCATT-------T-ATGGGCTTAGTGGCGCAGCTAACGCATTAAG-T-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACCAGCCAGAGATGGCTGGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTGAGTC-CCGCAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCATATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTTGCCAAGC--CGCGAGGTGGAGCTAATCCCAGAAAGCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGCAATGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGCTGCACCAGAAGCAGGTAGTCTAACCTTC------GGGAGGGCGCCT-GCCACGGTGTGGTCGATGACTGGGGTG---------------------------------------------------- Allochromatium_vinosum_DSM_180 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------GGCTTC-------GGCCTGAGTAGAGTGGCGGACGGGTGAGTAACGCATGGGAATCTGCCTGGC-AGAGGGGGATAACCCGGGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGGGGGC-----------------TTC----------GGCTCTCGTTGCCA-GATGAGCCCATGTCCGATTAGCTAGTTGGCGGGGTAAAGGCCCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCGCGTGGGTGAAGACGGCCTGCGGGTTGTAAAGCCCTTTCGGTGGGAAAGAAAAGCACGGGG-CTAATACCTCC-GTGT-ATTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGC-ACGTAGGCGGCACGGTCAGTCTGCTGTGAAAGCCCCGGGCTCAACCTGGGAACTGCAGTGGATACTGCCGCGCT-AGAGTGTGAAAGAGG-GGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACACCAGTGGCGAAGG--CGGCCCCCTGGTTCAACACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGCTGTCGACTAGCCGTTTGGTCCATT-------T-AAGGGCTGAGTGGCGCAGCTAACGCGCTAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTCGGAACTTGGCAGAGATGCCTTGGTGCCTTCGGGAGCCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGTCGGTACAGAGCGTCGCGAAGC--CGCGAGGTGGAGCCAATCGCACAAAACCGATCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTAGATAGCTTAACCTTC------GGGAGGGCGTTT-ACCACGGTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCT------ Aquicella_lusitana ----------------------------------------GGCGGCACGCCTAAC-ACATGC-AAGTCGAGCGGTAACAGGAT--------------------CTGTAG---------------------------------------------------------------------CAATACA-------GATTGCTGACGAGCGGCGGACGGGTGAGGAACACGTAGGAACTTGCCTGGG-AGAGGGGGATAACCAAGGGAAACTTTGGCTAATACCGCGTAAACTCGAG-----------------AGAGCAAAGCTGCCCCGCACTTG--------TTG------C--GGGGTGGCGCTTCCA-GAGAGGCCTGCGTCCGATTAGCTAGTTGGTGGGGTAAGAGCTCACC--AAGGCGATGATCGGTAACTGGTCTGAGAGGACGACCAGTCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TCTTGGACAATGGGGGCAACCCTGATCCAGCGATGCCGCGTGAGTGAAGAAGGCCTTCGGGTCGTAAAGCTCTTTAGGTTGGGAAGAAGTGTGTATGA-GGATAATTCAT-GCAC-ATTGACGGTACCGACAGAATAAGCACCGGCAAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTGATCGGAGTTACTGGGCGTAAAGGGC-GCGTAGGCGGATGAGTGTGTGTGATGTGAAAGCCCCGGGCTTAACCTGGGAAGCGCATCGCAAACTACTGATCT-GGAGTATGGGAGAGGGTGATGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGAGATCGGAAGGAACGTCAATGGCGAAGG--CAGTCACCTGGCCCAATACTGACGCTGAGG?GCGAAAGCGTGGGG-AGCGAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGGACTAGATGTTGATTGGGG----------AACCAAGCAGTATCGAAGCTAACGCGATAAGTC-TTCCGCCTGGGAAGTACGGCCGC-AAGGTTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATCCTGCGAATCCCGATGAGAGTTGGGAGTGCCGAAAGGAACGC-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTTGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA---TTAAGTTGGGGACTCTAAGGAGACTGCCGGTGAGGAACCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCTTTATGGGTAGGGCTACACACGTGCTACAATGGGGCGTACAGAGGGTAGCCAACC--CGCGAGGGGGAGCCAATCTCAGAAAGCGTCTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCAACGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACGTCATGGGAGTGGATGGTACCAGAAGTGGGTAGTTGAACCGAA------AGGGTGACGCCT-ACCACGGTATGATTCATGACTGGGACGAAGTCGTAACAAGGTAGCCGTA------------------------------ Aquisalimonas_asiatica ------TTAGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAGCGGCAGCATCA-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCTGGATGGCGAGCGGCGGACGGGTGAGTAACACGTGGGAATCTGCCCTTT-GGCGGGGGATAGCCCGGGGAAACTCGGATTAATACCGCATACTCCCTAC-----------------GGGGAAAAGTAGG-----CCTCTG-------TTT------C--ATGCTTACACCAAAG-GATGAGCCCGCGCCCGATTAGCTAGTTGGTAAGGTAACGGCTTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGCAGGGAGGAAAATCTCACGG-TTAATACCCGT-GAGC-CTTGACGTTACCTGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-ACGTAGGCGGCCAGGTAAGTTAGCTGTGAAAGCCCCGGGCTCAACCTGGGAATTGCAGTTAATACTGCTTGGCT-AGAGTTTGGTAGAGGGTGGTGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCCACCTGGACCAAAACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGCTGAGAACTAGCCGTTGGACCCATT-------C-AAGGGTTTAGTGGCGCAGCTAACGCGTTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAACGGGTTGCCAAGC--CGCGAGGTGGAGCCAATCTCGCAAAGCCGGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGCTGCACCAGAAGCGGGTAGTCTAACCTTC-------------------------------------------------------------------------------------------------- Arenimonas_malthae -------------------------TCAGAGTGAA-CGCTGGCGGCAGGCCTAAC-ACATGC-AAGTCGAGCGGCAGCGGGTC----------------------GTAG------------------------------------------------------------------------------CAATACGATGCCGGCGAGCGGCGGACGGGTGAGGAATACATCGGAATCTACCCAGT-CGTGGGGGATAACGTAGGGAAACTTACGCTAATACCGCATACGACCTGA-----------------GGGTGAAAGCAGG-----GGACC--------GCA------A--GGCCTTGCGCGATTG-GATGAGCCGATGTCGGATTAGCTAGTTGGTGAGGTAAAGGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTTGTCCGGGAAGAAATCTTCCGAC-CTAATACGTCG-GGAG-GATGACGGTACCGGAAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTCGTTAAGTCTGCCGTGAAAGCCCCGGGCTCAACCTGGGAATGGCGGTGGATACTGGCGGACT-AGAGTGCGGTAGAGGGTGGTGGAATT-CCCGGTGTAGCAGTGAAATGCGTAGAGATCGGGAGGAACATCTGTGGCGAAGG--CGGCCACCTGGACCAGCACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAACTGGACGTTGGGCTCAAT-------T-AGGAGCTCAGTGTCGAAGCTAACGCGTTAAGTT-CGCCGCCTGGGGAGTACGGTCGC-AAGACTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGATGCAACGCGCAGAACCTTACCTGGCCTTGAC-ATCCACGGAATCCTTTAGAGATAGAGGAGTGCCTTCGGGAACCG-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-AGTAATGTCGGGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGCCAGGGCTACACACGTACTACAATGGTGGGGACAGAGGGTCGCGAGGC--CGCGAGGCGGAGCCAATCCCAGAAACCCCATCCTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGCAGGTAGTCTAACCGCA------AGGGGGACGCTT-GCCACGGTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCC--------------------------------- Arhodomonas_aquaeolei -?AACTGAAGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAGCGGCAGCAGCT?------------------------------------------------------------------------------------------------?CTTCG-------GGAGGCTGGCGAGCGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCTTT-GGTGGGGGATAGCCCGGGGAAACTCGGATTAATACCGCATACGCCCTGC-----------------GGGGCAAAGTGGC-----CCTCT--------GAA------T--ATGGTCACGCCGAAG-GATGAGCCCGCGTCCGATTAGCTTGTTGGTAGGGTAAAGGCCTACC--AAGGCGACGATCGGTAGCT?GTCTTAGCGGACGATCAGCCACACCGGGACTGAGACACGGCCC???CTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGAAACCC??ATCCAGCAATGCCGCGTGGGTGAAGAAGGCTTGCGGGTTGTAAAGCCC?TTCAGCCGGGAGGAAAAGCATTCGG-TTAATACCCGG-ATGT-ATTGACGTTACCGGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC?AGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTCGGATAAGTCGGGTGTGAAAGCCCCGGGCTCAACCTGGG?ATTGCATTCGATACTGTCTGGCT-AGAGTCTGGCAGAGGGAGGTGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGATATCGGAAGGAACACCAGTGGCGAAGG--CGACCTCCTGGGCCAAGACTGACGCTGAGGTGCG?AAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGAACTAGCCGTTGGCCTCATT-------T-ATGAGGCTCGTGGCGCAGCTAACGCGATAAGTT-CTC?GCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCC?GCACAAGCGGTGGAGCATGTGGTTTAATTCGATG?AACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCCTGGTTGCCAGCG-GTTCG-GCCGGGAACTCCAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAGTCGGTTGCCAACC--CGCGAGGGGGAGCCAATCTGCTAAAGCCGGTCCCAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCA?TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTCGGCT?CACCAGAAGTCGGTAGTCTAACCTTC------GGGAGGACG?CG-CC?ACGGTGTGGTCGA?G?C??GGG------------------------------------------------------ Beggiatoa_alba_B18LD --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACGGG---------------------------------------------------------------------------------------------------------------TTAAGCCGACGAGTGGCGGACGGGTGAGTAATACATGGGAATCTGCCTGAT-AGTGGGGGACAACCTAGGGAAACTTAGGCTAATACCGCATAATCCCTAA-----------------GGGGGAAAGTAGG-----GGACC--------TTC------G--GGCCTTACGCTAACA-GATGAGCCCATGTCGGATTAGCTAGTTGGTAGGGTAAAAGCCTACC--AAGGCTACGATCCGTAGCTGGTCTGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTGCGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTAGGTTGGGAAGAAAAAGCACATG-CTAATACCATG-TGAA-ATTGACGTTACCAACGGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTAATTAAGTCAGATGTGAAATCCCTGAGCTTAACTTAGGAACAGCATTTGATACTGGTTGACT-AGAGTGTAATAGAGGGTAGTGGAATT-CCACGTGTAGCGGTGAAATGCGTAGATATGTGGAGGAACATCAGTGGCGAAGG--CGACTACCTGGATTAACACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGATGTTGGGAGAGAC---------TGTCTCTTAGTATCGCAGCTAACGCACTAAGTT-CTCCGCCTGGGGAGTACGGTCGC-AAGATTAAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATCCTAAGAATCCTGTAGAAATATGGGAGTGCCTTCGGGAGCTT-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCCTATCCTTAGTTGCCAGCG---TAAAGTCGGGAACTCTAAGGAGACTGCCGATGACAAATCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCTTTATGACCAGGGCTACACACGTGCTACAATGGTAGGTACAAGGGGTTGCCAAGC--CGCGAGGTGGAGCCAATCCCAGAAAACCTATCGTAGTCCGGATTGAAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTAGATCAGCACTGCTACGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGTACCAGAAGTAGGTAGTCTAACCGAA------AGGGGGGCGCTT-ACCACGGTATGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAACCC-------------------------------- Caedibacter_taeniospiralis ---------------------------A?ATTGAA-CGCTGGTGGTATGCTTAAC-ACATGC-AAGTCGAGCGGTCTAGGAACTAGATACTAGAAACTAGAAACTAGGGGTTGAATCGCTGCTTTAT?CTAAAGAATCACCTTGCTTGATAAGGTTCGACTTCCACTTTCTAGTTTCTAGTCTCT-------AGTTTCTAGATAGCGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCGTAC-AGAGGGGAACAACAGATGGAAACGTCTGCTAATACCGCATGAAGCCTGA-----------------GGGTGAAAG---------------------GTCG------C--GCAACGTCGCTGTAT-GATGAGCCTGCGTTGGATTAGCTGGTTGGTGAGGTAAAGGCTCACC--AAGGCGATGATCCATAGCTGTTCTGAGAGGAAGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAA-CCTGATCCAGCAATACCACGTGTGTGAAGAAGGCCTTAGGGTTGTAAAGCACTTTAGTTCGTGAGGAAGGCTATCAGG-TTAAGAGCTGG-ATAG-TTTGACGTTAGCGAAAGAATAAGCACCGGCAAACTCCGTGCCAGCAGCCGCG--TATACGGAGGGTGCGAGCGTTAATCGGAATGACTGGGCGTAAAGGGT-TCGTAGGTGGTCAGATAAGTCAGATGTGAAATACCTGGGCTCAACCTGGGAGGGTCATTTGAAACTGTTTGACT-AGAGTTTACTAGAGGATTGGGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGAGATCGGAAGGAACATCAATGGCGAAGG--CAACAATCTGGGGTTGAACTGACACTGAGGGACGAAAGCGTGGGG-ATCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGTACTAGCTGTTGGTCCTGGTG------TAAAAGGATTAGTGGCGCAGCAAACGCGATAAGTA-CTCCGCCTGGGGACTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGACCC-CACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCATAGAAGACGAGAGAGATTTTGTTGTG-CTTCGGGAACTA-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTTGTG--AAATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATTTTTAGTTGCCATCA---TTAAGTTGGGCACTCTAGAGAGACTGCCGCTGATAAGGCGGAGGAAGGTGGGGACGACGTCAAGTCATCATG---CTTACGGGCAGGGCTACACACGTGCTACAATGGGCATTACAGAGGGAGGCGAAGG--TGCGAGCTGAAGCGAAACTCAGAAAGGTGTTCGTAGTCCGGATTGCGCTCTGCAACTCGAGCGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCCGCGGTGAATACGTTCCCGGGTCTTG-TACACACCGCCCGTCACACCATGGGAGCGGGTTGCAAAAGAAGTAGATAGTCTAACCGTA------AGGGGGACGTTT-ACCACTTTGTGATTGATGACTGGGGTG---------------------------------------------------- Candidatus_Endorifita_persephone_ex_Riftia_pachyptila ----------------------GGCCTAGATTGAC---GCTGCGGTATGCTTAACAACATGC-AAGTCGAACGGTAACGCGG-----------------------AGAG----------------------------------------------------------------------CTTGCT-------CTCTGGCGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCCAGT-AGTGGGGGACAACTCGGAGAAATCCGAGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCTATTG-GATGAGCCTGCGTTGGATTAGCTAGTTGGTGGGGTAATGGCCTACC--AAGGCGACGATCCATAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAATTGGGAAGAAAAGCCTGAGG-ATAATACCCTT-GGGT-CTTGACGTTACCTTTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGCTTGTTAAGTCAGATGTGAAAGCCCTGGGCTCAACCTGGGAACTGCATTTGATACTGGCAGGCT-AGAGTATGGTAGAGGGAAGTGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACATCAGTGGCGAAGG--CGACTTCCTGGACCAATACTGACGCTGAGGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGCTCATTA------T-AAGGGCTTAGTGGCGCAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTCGGAACTTTCTAGAGATAGATTGGTGCCTTCGGGAGCCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGCCCTTAGTTGCCAGCA-CGTAATGGTGGGAACTCTAAGGGGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCTGCAAACC--CGCGAGGGGGAGCCAATCTCAGAAAACCGGTCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTGGGTAGAGTATCCTCT------CTGGGGGGGCCA-CCCTTGGGATCAGTGGG-------------------------------------------------------------- Candidatus_Ruthia_magnifica_str._Cm_ex_Calyptogena_magnifica --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGAAACGATA-----------------------CTAG----------------------------------------------------------------------TTTACT-------AGTAGGCGTCGAGTGGCGGACGGGTGAGCAACGCGTAGGAATCTGCCTGATAAGTGGGGGATAGCCCGAAGAAATTCGGATTAATACCGCATAATCTCTAC-----------------GGAGCAAAGGAGG-----CCTCTA------TTTA------T--ATGCTTTCGCTATCA-GATGAGCCTGCGTAAGATTAGCTAGTTGGTGAGGTAAAAGCTTACC--AAGGCAACGATCTTTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATTAGGAAGAAAAACTAATGG-TTAATACCCAT-TAGT-CTTGACGTTACTTTTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTTGTTAAGTTAGATGTGAAAGCCCCGGGCTCAACCTGGGAACTGCATTTGAAACTGGCAAACT-AGAGTATAGGAGGGGAAAGTGGAATT-TCTGGTGTAGCGGTGAAATGCGTAGATATCAGAAGGAACATCAATGGCGAAGG--CAGCTTTCTGGACAAATACTGACACTGAGGTACGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATAACTAGCCGTTGGGGGGAAG---------TGCCCTTTAGTGGCGAAGCTAACGCGTTAAGTT-ATCCGCCTGGGGAGTACGACCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATATCGCAAACTTTTCAGAGATGGAGAGGTGCCTTCGGGAATGC-GAATACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTATCCTTATTTGCCAGTA-CGTCATGGTGGGAACTATAAGGAGACTGCCGGTGATAAACCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGGAAGGACAAAGGGTCGCTAAGC--CGTGAGGTAGTGCTAATCTCACAAATCTTTTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGTAGATCAGAA-CGCTACGGTGAATACGTTCCCGGGTCTTG-TACACACCGCCCGTCATACCATGGGAGTGGGTTGCACCAGAAGTAGCTAGTCTAACTGTTT----ACAGAGGACGGTT-ACCACGGTGTGATTCATGACTGGGGTAAAGTCGTAACAAGGTAGCCCTACCGGAAGGTGGGGCTGGATTACCTCCTT-- Candidatus_Thiobios_zoothamnicoli_ex_Zoothamnium_niveum --------AGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGCGAAAGCG--------------------------------------------------------------------------------------------------CTTTCG-------GGCGTTAGTAGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCTGAT-AGTGGGGGATAACTCGGGGAAACTCGAGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAG-------------------------------A--CTTCGGTCACTATCA-GATGAGCCCGCGTCAGATTAGCTTGTTGGTGGGGTAATGGCTCACC--AAGGCAACGATCTGTAGCTGGTCTGAGAGGACGAACAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--AGGAA-TATTGCACAATGGGGGAAACCCTGATGCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTTGGGAAGATAA----------------------------TGACGTTACCAACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGCTAGGTCAGTCAGATGTGAAATCCCCAGGCTCAACCTGGGAATTGCATTTGATACTGCTTGGCT-AGAGTATGGTAGAGGGTGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACATCAGTGGCGAAGG--CGGCCACCTGGATTAATACTGACGCTGAAGTGCGAAAGCGTGGGGAAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGTTTT---------T-ATAAATTTAGTGGCGTACGTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGTTCTTGAC-ATCCAGTGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACAC-TGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGAACTGGGCTACACACGTGCTACAATGGACGGTACAGAGGGCCGCAAACC--CGCGAGGGGGAGCTAATCCCAAAAAACCGTTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCCCTAGTAATCGCAGATCAGAA-TGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCGAAAGAAGTGGGTAGCTTAAT-----------AATGGGCGCTC-ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTT- Cardiobacterium_hominis_ATCC_15826 --------AGAGTTTGA-TTCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGAAACGAT------------------------GGAG----------------------------------------------------------------------CTTGCT--------CCAGGCGTCGAGTGGCGGACGGGTGAGTAACGCATGGGAATCTGCCTTTT-GCTGGGGGATAACGTAGGGAAACTTACGCTAATACCGCATAAGACCTAA-----------------GGGTGAAAGCGGG-----GGACC--------GAA------A--GGCCTCGCGGCAAGA-GATGAGCCCATGTTGGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGGAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTAGGGAGGAAAGGTGCGTAG-TTAATACCTG--CGCA-ATTGACGTTACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTATTCGGAATTACTGGGCGTAAAGCGC-ACGCAGGCGGTTGCCCAAGTCAGATGTGAAAGCCCCGGGCTTAACCTGGGAACTGCATTTGAAACTGGGCGACT-AGAGTATGAAAGAGGAAAGCGGAATT-TCCAGTGTAGCAGTGAAATGCGTAGATATTGGAAGGAACACCGATGGCGAAGG--CAGCTTTCTGGGTCGATACTGACGCTCATGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGGCGTCGGGTTGTT----------AAAGACTCGGTGCCGGAGCTAACGCATTAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GAAATTGAC-GGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGCCTTGAC-ATCCTAGGAACTTGGCAGAGATGCCTTGGTGCCTTCGGGAACCT-AGAGACAGGTGTTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCCTTACTTGCCAGCA-CTTTG-GGTGGGAACTGTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGCCTGGGCTACACACGTGCTACAATGGTCGGTACAGACGGTAGCGAAGC--CGCGAGGTGGAGCCAATCTGAGAAAGCCGATCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGTCTTG-TACACACTGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGCAGGTAGCTTAACTT--------AGGAGGGCGCTT-GCCACGGTGTGGCCGATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCT------ Chromatium_okenii --------AGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGTATGCCTAAC-ACATGC-AAGTCGAACGTCAA------------------------------AG----------------------------------------------------------------------GTCTTC-------GGATTGAGTAGCGTGGCGGACGGGTGAGTAAAGCGTGGGAATCTGCCTTGC-AGTGGGGGATAACCCGGGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGGGGGC-----------------TTT----------GGCTCTCGTTGCAA-GATGAGCCCACGTCCGATTAGCTAGTTGGTAGGGTAAAGGCCTACC--AAGGCGACGATCGGTCGCTGGTCTGAGAGGATGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGAAACCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGAAAGAAAACCTGGTGG-TTAATACCCAT-CGGC-TTTGACGTTACTCACAAAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-ACGTAGGCGGCGCCGTCAGTCCGATGTGAAAGCCCTGGGCTTAACCTGGGAACTGCATTGGATACTGCGGCGCT-AGAATGTGAAAGAGGGGAGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACACCAGTGGCGAAGG--CGGCTCCCTGGTTCAACATTGACGCTGAGGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCGGTAAACGATGTCGACTAGCCGTTGGGTCCATT-------T-AAGGGCTTAGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAAAACCTTACCAGCCCTTGAC-ATCCTCGGAATCTTGCAGAGATGTGAGAGTGCCTTCGGGAACCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-CGTCAAGGCGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGCCGGTACAGAGCGTCGCGACCC--CGCGAGGGTGAGCCAATCGCAGAAAACCGGTCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACAC------------------------------------------------------------------------------------------------------------------------------------------- Coxiella_burnetii ----------------------------GATTGAA-CGCTAGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAATGCGTAGGAATCTACCTTGT-AGTGGGGGATAACCTGGGGAAACTCGGGCTAATACCGCATAATCTCTTT-----------------GGAGCAAAGCGGG-----GGATC--------TTC------G--GACCTCGTGCTATAA-GATGAGCCTACGTCGGATTAGCTTGTTGGTGGGGTAATGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCGGTGGGGAAGAAATTCTCAAGG-GTAATATCCTT-GGGC-GTTGACGTTACCCACAGAAGAAGCACTGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGAGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGC-GCGTAGGTGGATATTTAAGTCGGATGTGAAAGCCCTGGGCTTAACCTGGGAATTGCACCCGATACTGGGTATCT-TGAGTATGGTAGAGGGAAGTGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGATATCGGAAAGAACACCAGTGGCGAAGG--CGACTTCCTGGACCAATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGAGACCCTGGTAGTCCACGCCGTCAACGATGAGAACTAGCTGTTGGGAAGTTC----------ACTTCTTAGTAGCGAAGCTAACGCGTTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GAAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAAAACCTTACCTACCCTTGAC-ATCCTCGGAACTTGTCAGAGATGATTTGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTCGTCCTTAGTTGCCAGCG-AGTCAAGTCGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGATGTCAAGTCATCATGGCCCTTACGGGTAGGGCTACACACGTGCTACAATGGGCAGTACAAAGGGTTGCCAAGC--CGCGAGGTGGAGCTAATCCCAGAAAACTGCTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCTCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGAATTGTACCAGAAGCGGGTAGGCTAACCTTC------GGGAGGCCGCTC-ACCACGGTATGATCCATGACTGGGGTGAA-------------------------------------------------- Dichelobacter_nodosus_VCS1703A --AACTGAAGAGTTTGA-TTCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGGGTTAT-------------------------GTAG----------------------------------------------------------------------CTTGCT---------ATGTAACCTAGTGGCGGACGGGTGAGTAATATATAGGAATCTGCCTTAT-GGTGGGGGACAACGTATGGAAACGTACGCTAATACCGCATAAGATTGAA-----------------GAATGAAAGCGGG-----GGCTC--------GAA------A--GACCTCGCGCCGTAA-GATGAGCCTATATCGGATTAGCTAGTTGGTGGGGTAAGAGCCTACC--AAGGCGACGATCCGTAGCTGGTTTGAGAGAATGATCAGCCACATCGGGACTGAGACACGGCCCGAACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGGAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTTATTAGTGAAGAACGGTGCATGG-TTAATACCCA--TGCA-ATTGACATTAGCTAAGGAAAAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATTCGGAATGACTGGGCGTAAAGCGC-ACGCAGGTGGTTTTATAAGTCAGGTGTGAAATCCCTGGGCTCAACCTAGGAATTGCATTTGAAACCGTAAGACT-AGAGTATGTCAGAGGAAGGCGGAATT-TCCAGTGTAGCAGTGAAATGCGTAGATATTGGAAGGAACACCGATGGCGAAGG--CAGCCTTCTGGGGCAATACTGACACTCATGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGGTGTTGGGTAGA------------AATACTCGGTACCGAAGCTAACGCAATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GAAATTGAC-GGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGCTTTGAC-ATCCAGAGAATTCTACAGAGATGTGGGAGTGCCTTCGGGAACTC-TGAGACAGGTGTTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCCTTACTTGCCAGCA-CGTAAAGGTGGGAACTATAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACAGCCTGGGCTACACACGTGCTACAATGGGCGGTACAGACGGTAGCCAACC--CGCGAGGGGGAGCCAATCTGAGAAAACCGTTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-CGTCGCGGTGAATACGTTCCCGGGTCTTG-TACACACTGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGTAGGTAGCTTAACCGTA------AGGAGGGCGCTT-ACCACGGTGTGGCCGATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTT- Diplorickettsia_massiliensis -----------------------------ATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGGCAGCACAGT----------------------AAAGGTT-----------------------------------------------------------------TCGGCCTT-------TATGGGTGGCGAGTGGCGGACGGGTGAGTAATAGGTAGGAATCTGTCCTAG-TGACCGGGACAACCCGAGGAAACTCGGGCTAATACCGGGCGATATCGAA-----------------AGATCAAAGCAGG-----GGACTTTACGAAAGTA------A--GGCCTTGCGCACTGG-GGTGAGCCTACGTCGGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCAACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTAGGTGGGGAAGAAAAGTAACGGG-TGAATAATCTG-TTAT-TTTGACGGTACCCGCAGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCAGAATGACTGGGCGTAAAGGGC-GTGTAGGTGGTTGACTAGGTTTGATGTGAAATCCCCGGGCTTAACCTGGGAATGGCGTCGAAAACGGGTCGACT-CGAGTGAGACAGAGGGTTGTGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGATATCGGAAAGAACATCAGTGGCGAAGG--CGACAACCTGGGTCTTAACTGACACTGAGGCGCGAAGGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCGGTAAACGATGAGAACTAGCTGTGAGGTGTGGGGCATTGCT-CTGCGCGACGTAGCGAAGCTAACGCGTTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACCCGAAGAACCTTACCTACCCTTGAC-ATCCTTGGAAGGGCGCAGAGATGTGCCTGTGCCGAAAGGAACCA-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTATCCTTTGTTGCCACCA-GGTCAAGCTGGGAACTTAAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCTTTATGGGTAGGGCTACACACGTGCTACAATGGGGCGTACAATAGGAAGCCAACC--CGCGAGGGGGAGCCAATCCT-TAAAACGTCTCGCAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTTGGAATCGCTAGTAATCGCAGATCAGCA-AGCTGCGGTGAATACGTTCTCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTTTACCAGAAGGCGGTAGATTAACCTCGT--AAGAGGAGGTCGCCG-ACCACGGTAAGATTCATGACTGGGGTG---------------------------------------------------- Ectothiorhodosinus_mongolicus -------------------------------------GCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAAC-----------------------------AG----------------------------------------------------------------------GCCTTC-------GGGCGCTGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCCAGT-AGTGGGGGACAACCCGGGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCAGG-----GGATC--------TTC------G--GACCTTGCGCTATTG-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGGGGTAATGGCCCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAGGAAAAGCGGGTAC-CTAATACGTAC-TTGT-CTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-ACGTAGGTGGCTACATCCGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATCTGATACTGTGTAGCT-AGAGTTTGGTAGAGGAGAGTGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGATATCGGAAGGAACACCAGTGGCGAAGG--CGACTCTCTGGACTAAAACTGACACTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGAACTAGCCGTTGGGGGGA?T-------T-AACCCCTTAGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATGCTAGGAATCCCACAGAGATGTGGGAGTCCCTTCGGGAACCT-AGACACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTTGCCAAGC--CGCGAGGTGGAGCTAATCCCAGAAAGCCGATCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATTGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTAGCTAGTCTAACCTTC------GGGAGGACGGTT-ACCACGGTGTGGTCAATGACT---------------------------------------------------------- Ectothiorhodospira_shaposhnikovii ------TTGAGTTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAAC-----------------------------AG----------------------------------------------------------------------GCCTTC-------GGGCGCTGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTGGT-AGTGGGGGACAACCCGGGGAAACTCGGGCTAATACCGCATACGCCCTAA-----------------GGGGGAAAGCGGG-----GGCTC--------TTC------G--GACCTCGCGCTATCA-GATGAGCCTGCGTCCGATTAGCTAGTTGGTGGGGTAATGGCCCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAGGAAAAGCGGGTGC-CTAATACGTGC-CTGA-CTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-ACGTAGGTGGTGATGTCAGTCAGATGTGAAAGCCCTGGGCTCAACCTGGGAACTGCATCTGATACTGCATGGCT-AGAGTTTGGTAGAGGAGAGTGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGATATCGGAAGGAACACCAGTGGCGAAGG--CGACTCTCTGGACTAAAACTGACACTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGAACTAGCCGTTGGGAGGGTT-------T-AACCTCTTAGTGGCGCAGCAAACGCGTTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAATCCTGCAGAGATGTGGGAGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCCTAGTTGCCAACA-CTTTG-GGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCAGTACAGTGGGTTGCCAAGC--CGCGAGGTGGAGCTAATCCCAAAAAGCTGGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGCTGCACCAGAAGTGGATAGTCTAACCTTC------GGGAGGACGTTC-ACCACGGTGTGGTCAATGACTGGGGTGAAGTCGTA-CAGTACA------------------------------------ Fluoribacter_dumoffii ---------------------------------------------------TAAC-ACATGC-AAGTCGAACGGCAGCACGGT----------------------CTAG----------------------------------------------------------------------CTTGCT------AGATGGGTGGCGAGTGGCGAACGGGTGAGTAACGCGTAGGAATATGCCTTGA-AGTGGGGGACAACTTGGGGAAACTCAAGCTAATACCGCATAATGTCTAA-----------------GGACGAAAGCTGG-----GGACCT-------TTT------A--GGCCTGGCGCTTTAA-GATTAGCCTCCGTCCGATTAGCTAGTTGGTGGGGTAAGGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGGCCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAGTGGGGAGGAGGGTTGATAGG-TTAAGAGCTAA-TTAA-CTGGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTGATTAAGTTATCTGTGAAATCCCTGGGCTTAACCTGGGCAGGTCAGATGATACTGGTTGACT-CGAGTATGGGAGAGGGTAGTGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGAGATCGGAAGGAACACCAGTGGCGAAGG--CGGCTACCTGGCCTAATACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCTGTTGGATATATG-------A-AAATATTTAGTGGCGCAGCAAACGCGATAAGTT-GACCGCCTGGGGAGTACGGTCGC-AAGATTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATACAGTGAATTTTGCAGAGATGCATTAGTGCCTTCGGGAACAC-TGATACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-CGTAAAGGCGGGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGCGGGGATGACGTCAAGTCATCATGG--CTTACGGGTAGGGCTACACACGTGCTACAATGGGTGATACAGAGGG-AACGAAGG--GGTGACCTGGAGCTAATCTTAGAAAGTCGCTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTAGATAGTCTAACCTTC------GGGAGGACGTTT-AC----------------------------------------------------------------------------- Francisella_philomiragia --------AGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGTGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACAG---------------------------------------------------------------------------------------------------GTCTTC-------GGATGCTGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCCATT-TGAGGGGGATACCAGTTGGAAACGACTGTTAATACCGCATAATATCTGT-----------------GGATTAAAGGTGGCT-------------------------T--AGGCTGCCGCAGATG-GATGAGCCTGCGTTGGATTAGCTAGTTGGTGGGGTAAGGGCCTACC--AAGGCTACGATCCATAGCTGATTTGAGAGGATGATCAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCATGTGTGTGAAGAAGGCTCTAGGGTTGTAAAGCACTTTAGTTGGGGAGGAAAGCCTATAAG-TTAATAGCTTG-TAGG-AAGGACGTTACCCAAAGAATAAGGACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGGTCCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGT-CTGTAGGTGGTTTGTTAAGTCAGATGTGAAAGCCCAGGGCTCAACCTTGGAACTGCATTTGATACTGGCAAACT-AGAGTATGGTAGAGGAATGGGGAATT-TCTGGTGTAGCGGTGAAATGCGTAGAGATCAGAAGGAACACCAATGGCGAAGG--CAACATTCTGGACCAATACTGACACTGAGGGACGAAAGCGTGGGG-ATCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGTACTAGCTGTTGGATTCGGTG------TAAAGGATCTAGTGGCGCAGCTAACGCGTTAAGTA-CTCCGCCTGGGGACTACGGCCGC-AAGGCTAAAACTCAAA-GGAATTGAC-GGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATCCTGCGAACTTTCTAGAGATAGATTGGTGCCTTCGGGAACGC-AGTGACAGGTGCTGCACGGC-TGT-CGTCAGCTCGTGTTGTG--AAATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCCTATTGATAGTTACCATCA---TTAAGTTGGGTACTCTATTGAGACTGCCGCTGACAAGGCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGGTATTACAGAGGGCTGCGAAGG--TGCGAGCTGGAGCGAAACTCAGAAAGGTACTCTTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCAGGTCAGAA-TACTGCGGTGAATACGTTCCCGGGTCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCTCCAGAAGTAGATAGCTTAAC----------GAATGGGCGTTT-ACCACGGAGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTT-- Gamma_3_endosymbiont_ex_Olavius_algarvensis --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGTAGCGCGG-----------------------AGAG----------------------------------------------------------------------CTTGCT-------CTCTGGCGACGAGTGGCGGACGGGTGCGTAACGCGTGGGAATCTACCTTTT-AGTGGGGGATAGCCCGGAGAAATCCGGATTAATACCGCATAATCTCTAC-----------------GGAGCAAAGTGGG-----GGATC--------TTC------G--GACCTCACGCTATTA-GATGGGCCCGCGTTAGATTAGCTTGTTGGTGAGGTAATGGCTCACC--AAGGCAACGCTCTATAGCTGGTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATAGAGACGAAAAGCTTAGGG-TTAATAACCCT-GAGT-CTTGACTTAACCTATAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-TCGTAGGCGGTTTGTTAAGTCGGATGTGAAAGCCCCGGGCTCAACCTGGGAACTGCATTCGATACTGACAGACT-AGAGTATAGTAGAGGCAAGTGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACATCAGTGGCGAAGG--CGACTTGCTGGACTAATACTGACGCTGAGGAGCGAAAGCGTGGGG-AGCAAACGGGATTAGATACCCCGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGGGTCTT-------A-GTACCTTTAGTGGCGCAGCTAACGCATTAAGTT-GACCGCCTGGGGAGTACGGTCGC-AAGACTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCTCTTGAC-ATCCTGCGAACTTTCTAGAGATAGATTGGTGCCTTCGGGAACGC-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CGTAATGGTGGGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGGCTGTACAGAGGGTCGCTAACC--CGCGAGGGGGAGCCAATCCCACAAAGCAGTTCTTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTTGGAATCGCTAGTAATCGTAGATCAGCATTGCTACGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTGGCTAGTCTAACCTTC------GGGAGGACGGTC-ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTA------------------------------------ Gamma1_endosymbiont_ex_Olavius_algarvensis --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGAA------------------------------CG----------------------------------------------------------------------CCCCTTC-----GGGGGTAAGTAGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCTCGT-AGTAGGGGACAACCCGGGGAAACTCGGGCTAATACCGCATACGTCCTAT-----------------GGGAGAAAGGGGGC-----------------CTCTGCTTGC--ATGCTCTCGCTATGA-GATGAGCCCGCGTCCGATTAGCTTGTTGGTGGGGTAAATGCCTACC--AAGGCGATGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTCGGGAAGAAAGATCTCGAG-TTAATAGCTCG-GGGC-CTTGACGTTATCGACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGAAATCACTGGGCGTAAAGCGC-GCGTAGGCGGCCGGATAAGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCGTTTGATACTGTCCGGCT-AGAGTGTGGTAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACATCGGTGGCGAAGG--CGACCCCCTGGACCAATACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTAGCCGTTGGGCTCATT-------T-AAGGGTTTAGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTGTGAACTTTCTAGAGATAGATCGGTGCCTTCGGGAACAC-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGGCGGTACAGAGGGTTGCGAAGC--GGCGACGTGGAGCCAATCCCAGAAAACCGGTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGAA-CGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTAGGTAGCTTAACCTTC------GGGAGGGCGCTT-ACCACGGTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAA----------------------------------- Gamma1_endosymbiont_ex_Olavius_crassitunicatus --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------CCCCTTC-----GGGGGCGAGTAGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTACCTCGT-AGTGGGGGATAACCCGGGGAAGCTCGGGTCAATACCGCATACGTCCTAC-----------------GGGAGAAAGGGGGC-----------------CTCTGTCTGT--ATGCTCCTGCTATGA-GATGAGCCTGCGTCCGATTAGCTTGTTGGTGGGGTAAATGCCTACC--AAGGCAATGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGATACGGCCCAGACTCCTATGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTTGGGAGGAAATGCCTTGGG-TTAATACCCCA-GGGT-CTTGACGTTACCAACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGCAGGCGGTCGGATAAGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCGTTTGATACTGTTCGGCT-AGAGTATGGTAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGGAATGCGTAGATATCTGGAGGAACACCAGTGGCGAAGG--CGACCCCCTGGACCAATACTGACGCTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTAGCCGTTGGACTCATT-------T-GAGGGTTTAGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGCTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCCGCGAACTGTCTAGAGATAGACGGGTGCCTTCGGGAGCGC-GGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-GTTCGGCCGGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGGCGGCACAGAGGGTTGCGAAGC--GGCGACGTGGAGCTAATCCCAGAAAGCCGGTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGAA-TGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTCGGTTGCACCAGAAGTGGGTAGCTTAACCTTC------GGGAGGGCGCTC-ACCACGGTGTGGTTGACGACTGGGGTGAAGTCGTAACAAGGTA------------------------------------ Halochromatium_glycolicum -----------------------------ATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------CCCTTC-------GGGGTGAGTAGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCTGT-AGTGGGGAACAACCCGGGGAAACTCGGGCTAATACCGCATACGTCCTAC-----------------GGGAGAAAGGGGGC-----------------CTT------C--GGGCTCTCGCTGCAG-GATGAGCCCACGTCCGATTAGCTTGTTGGTGGGGTAATGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCCTGGGG-TTAATACCCCT-GGGT-CTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGC-ACGTAGGCGGTGAAGTCAGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTTGATACTGCTTGACT-TGAGTATGGTAGAGGGAGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACACCAGTGGCGAAGG--CGGCCTCCTGGACCAATACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTAGCCGTTGGATCCATT-------T-AAGGGTTTAGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTTGGAAC-TGTCAGAGATGAC-AGGTGCCTTCGGGAGCCA-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGTCGGCACAGAGGGTCGCGAAGC--CGCGAGGTGGAGCTAATCCCAGAAAACCGATCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGCTGCACCAGAAGTAGATAGCTTAACCTTC------GGGAGGGCGTTT-ACCACGGTGTGGTTAATGACTGGGGTGA--------------------------------------------------- Halorhodospira_halophila_SL1 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAGCGGCAGCGCGGA----------------------GGAG----------------------------------------------------------------------CTTGCTC------CTCTGGCGGCGAGCGGCGGACGGGTGAGTAACGCGTGGGAATTTACCCTTC-GGTGGGGGATAGCCCGGGGAAACTCGGATTAATACCGCATACGCCCTAC-----------------GGGGGAAAGTGGG-----CCTCTG-------ATT------C--AAGCTCACGCCGAAG-GATGAGCCCGCGTCCGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCGGTAGCTGGTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCATCGGGGAGGAAAAGCGTTGGG-TTAATACCCTG-GCGT-CTTGACGTTACCCGAAGAAGAAGCGCCGGCAAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGCGCAAGCGTTAATCGGAATCACTGGGCGTAAAGGGC-GCGTAGGCGGTCAGGTAAGTCGGGTGTGAAAGCCCTGGGCTCAACCTAGGAATTGCATCCGATACTGCTTGACT-AGAGTTCGGTAGAGGGTAGTGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGACTGCCTGGACCGAAACTGACGCTGAGGCGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGCTGAGAACTAGCCGTTGGGCCTATT-------T-ATAGGCTTAGTGGCGCAGCTAACGCATTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGCTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCGGCCCTTGAC-ATCCTCGGAACCTTCTGGAGACAGAGGGGTGCCTTCGGGAGCCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGGGCCGGGCTACACACGTGCTACAATGGCGGGTACAGAGGGTTGCCAATC--CGCGAGGTGGAGCTAATCCCTGAAAGCCCGTCCTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGCAGGAATCGCTAGTAATCGCAGATCAGCAATGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTCGGCTGCACCAGAAGTGCGTAGTCTAACCTTC------GGGAGGACGCGT-ACCACGGTGTGGTCGGCGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTT- Halorhodospira_neutriphila --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAGCGGCAGCGCGG-----------------------AGAG----------------------------------------------------------------------CCTAGCT------CTCTGGCGGCGAGCGGCGGACGGGTGAGTAACGCGTGGGTATCTGCCCTTC-GGTGGGGGACAGCCCGGGGAAACCCGGATTAATACCGCATACGCCCTAC-----------------GGGGGAAAGTGGG-----CCTCTG-------ATC------C--AAGCTCACGCCGAAG-GATGAGCCCGCGTCCGATTAGCTAGTTGGTAGGGTAAAGGCCTACC--AAGGCGACAATCGGTAGCTGGTTTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTGCGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCATCGGGGAGGAAAAGCGTCGGG-CTAATACCTTG-GCGT-CTTGACGTTACCCGAAGAAGAAGCGCCGGCAAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGCGCAAGCGTTAATCGGAATCACTGGGCGTAAAGGGC-GCGCAGGCGGTCGGGTAAGTCGGGTGTGAAAGCCCTGGGCTCAACCTAGGAATTGCATCCGATACTGCTCGGCT-AGAGTCCGGTAGAGGGTAGTGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGACTGCCTGGACCGAGACTGACGCTGAGGCGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGGACTAGCCGTTGGCCCCATT-------T-AAGGGGTTAGTGGCGTAGCTAACGCGTTAAGTC-CTCCGCCTGGGGAGTACGGCCGC-AAGGCTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCGGCCCTTGAC-ATCCTCGGAACCTTCCTGAGAGGGAAGGGTGCCTTCGGGAGCCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-GTCCG-GCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGGGCCGGGCTACACACGTGCTACAATGGCAGGTACAAAGGGTCGCGAAGC--CGCGAGGTGGAGCTAATCCTCGAAAGCCTGTCCTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGCTGGAATCGCTAGTAATCGCAGATCAGCAATGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTCGGCTGCACCAGAAGTGCGTAGCCTAACCCGCA----AGGGAGGGCGCGT-ACCACGGTGTGGTCGGCGACTGGGGTGAAGTCGTAACAAGGTAACC--------------------------------- Halothiobacillus_kellyi -------TAGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCACG------------------------GGTG----------------------------------------------------------------------CTTGC--------ACCTGGTGGCGAGTGGCGGACGGGTGAGTAATGCATGGAAATCTGCCCTGA-GGTGGGGGACAACGTTGGGAAACTAACGCTAATACCGCATAACCTCTTT-----------------GGAGCAAAGCAGG-----GGATC--------TTC------G--GACCTTGTGCCTTGG-GATGAGTCCATGTCGGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCCGTAGCCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTTGTCAGTGAAGAACAGGTTTAGG-TTAATACCCTG-AACA-CTTGACGTTAACTGAAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGCGGATGATTAAGTCTGATGTGAAATCCCCGGGCTCAACCTGGGAATTGCATTGGATACTGGTCGTCT-AGAGTATGGTAGAGGGAAGTGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGATATCGGAAAGAACACCAATGGCGAAGG--CAACTTCCTGGGCCAATACTGACGCTGAGGTACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCGACTTGTCGTTGGGAGGGTT-------T-AGCCTTTCAGTGACGGAGCTAACGCGTTAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAAAACCTTACCTGGCCTTGAC-ATCCTCGGAACTTACCAGAGATGGTTTGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCTCTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAGAGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGCCAGGGCTACACACGTGCTACAATGGGCGGTACAGAGGGTAGCCAACC--CGCGAGGGGGAGCCAATCCCACAAAGCCGCTCCTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGCATTGCCACGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGCTAGTCTAACCTTC------GGGAGGACGGTT-ACCACGGTGTGATTCATGACTGGGGTGAAGTCGTAACA----------------------------------------- Halothiobacillus_neapolitanus -------TAGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACAG---------------------------------------------------------------------------------------------------GCCTTC-------GGGCGCTGACGAGTGGCGGACGGGTGAGTAATACATGGGAATCTGCCCTTA-GGTGGGGGATAACGTTGGGAAACTAACGCTAATACCGCATAACCTCTTT-----------------GGAGCAAAGCGTG-----GGATC--------TTC------G--GACCACGTGCCAAAG-GATGAGCCCATGTCTGATTAGCTAGTTGGTGAGGTAACGGCTCACC--AAGGCGACGATCAGTAGCCGGCCTGAGAGGGTGTACGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTTGTTGAGGAAGAATGTGTTTGGG-TTAATAGTCCA-AATG-CTTGACGTTACTCAAAGAAAAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGCGGAATTTTAAGTCTGATGTGAAATCCCCGGGCTTAACCTGGGAACTGCATTGGATACTGGGATTCT-AGAGTATGGTAGAGGGTGGCGGAATT-TCTGGTGTAGCGGTGAAATGCGTAGATATCAGAAAGAACACCAATGGCGAAGG--CAGCCACCTGGGCCAATACTGACGCTGAGGTACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCTACTTGTCGTCGGGAGGGCT-------A-AACCTTTCGGTGACGGAGCTAACGCATTAAGTA-GACCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAAAACCTTACCTGGCCTTGAC-ATCCTGCGAACTTTCTAGAGATAGATTGGTGCCTTCGGGAGCGC-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCTTTAGTTGCCAGCA-CGTTATGGTGGGAACTCTAAAGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGCCAGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTAGCCAAAC--CGCGAGGTGGAGCCAATCCCATAAAGCCGATCTTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGCATTGCCACGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGTAGGTAGCTTAACCGTA------AGGAGGGCGCTT-ACCACGGTGTGGCCGATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGTTGGATCACCTCCTTA- Lamprocystis_purpurea ---------------------------------------------------TAAA-ACATGC-AAGTTGAACGCGAA------------------------------AG-----------------------------------------------------------------------TCTTC-------GGAGTGAGTAGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCTTGT-AGTGGGGGACAACCCGGGGAAACTCGGGCTAATACCGCATACGTCCTAC-----------------GGGAGAAAGGGGGC-----------------TTC----------GGCTCTCGCTGCAA-GATGAGCCCGCGTCCGATTAGCTTGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAG-CTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCGCAGGG-TTAATACCCCT-GA{AGT}T-CTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCTTTAATCGGAATCACTGGGCGTAAAGCGC-ACGTAGGCGGCGAAGTCAGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAACTGCATTT?ATACTGCTTGGCT-CGAGTCTGGTAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACACCAGTGGCGAAGG--CGGCCCCCTGGACCAAGACTGACGCTGAGGTGCGAAAG-GTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTAGCCGTTGGGCTCATT-------T-TATGGCTTAGTGGCGCAG-AAACGCGATAAGTC-GACCG-CTGGGGAGTACGGCCGC-AAG--TTATACTCAAA-GGAATTCACGGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTCGGAACTTGGCAGAGATGCCTTGGTGCCTTCGGGAGCCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-AGTAAAGTCGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGCTGCGAAGC--AGCGATGTGGAGCTAATCCCAGAAAACCGATCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTAGATAGCTTAACCTTC------GGGA-GGCGTTT-ACCACG------------------------------------------------------------------------- Lamprocystis_roseopersicina --------AGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------TCCTTT-------GGGGCGAGTAGAGTGGCGGACGGGTGAGTAATGCGTGGGAATCTGCCTGGC-AGTGGGGGACAACCCGGGGAAACTCGGGCTAATACCGCATACGACCTAC-----------------GGGTGAAAGGGGGG-----------------TTT------C--GGCCTCTCGCTGCGA-GATGAGCCCACGTCCGATTAGCTAGTTGGCAGGGTAAGAGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAGCATTTTGGG-TTAATACCCTG-GAAT-GTTGACGTTACCCACAAAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGC-ACGTAGGCGGCGGCGTCAGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAACGGCATTTGATACTGCGCGGCT-CGAGTCTGCTAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACACCAGTGGCGAAGG--CGGCCCCCTGGAGCAAGACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCGGTAAACGATGTCAACTAGCCGTTGGGTCCATT-------T-AAGGGCTTAGTGGCGCAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTTGGAATCTGGCGGAGACGTCGGAGTGCCTTCGGGAGCCA-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CATCATGGTGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGACGCCAACC--CGCGAGGGGGAGCCAATCCCAGAAAACCGGTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACAC------------------------------------------------------------------------------------------------------------------------------------------- Legionella_wadsworthii ATCTA--------------------------TTCG-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCATGGT----------------------CTAG----------------------------------------------------------------------CTTGCT------AGACTGATGGCGAGTGGCGAACGGGTGAGTAACGCGTAGGAATATGCCTTGA-AGTGGGGGACAACTTGGGGAAACTCAAGCTAATACCGCATAATATCTTT-----------------GGATGAAAGCTGG-----GGACC--------TTC------G--GGCCTGGCGCTTTAA-GATTAGCCTGCGTCCGATTAGCTAGTTGGTGGGGTAAGGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGGCCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGGAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAGTGGGGAGGAGGGTTTATAGG-TTAAGAGCTAA-TAAG-TTGGACGTCACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTGATTAAGTTATCTGTGAAATCCCCGGGCTTAACCTGGGCAGGTCAGATAATACTGGTTGACT-CGAGTATGGGAGAGGGTAGTGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGAGATCGGAAGGAACACCAGTGGCGAAGG--CGGCTACCTGGCCTAATACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCAACTAGCTGTTGGTTATATG-------A-AAATAATTAGTGGCGCAGCAAACGCGATAAGTT-GACCGCCTGGGGAGTACGGTCGC-AAGATTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATACAGTGTAGCTTGCAGAGATGCATTAGTGCCTTCGGGAACAC-TGATACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTAT-CTTAGTTGCCAGCC-CGTA--GGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGCGGGGATGACGTCAAGTCATCATGGCCCTTACGGGTAGGGCTACACACGTGCTACAATGG-TGGTACAGAGGGAAGCGAAGG--GGTGACCTGGAGCTAATCTTAGAAAGTCGCTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTAGATAGTCTAACCTTC------GGGAGGACGTTT-ACCACGGTGTGGTTCATGACTGGGGTGACGTCGC--------------------------------------------- Leucothrix_mucor --------AGAGTTTGA-T??TGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACAGG------------------------CTAG----------------------------------------------------------------------CTTGCT--------AGTGCTGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTACCCAGT-TGTGGGGGATAGCCCGGAGAAATCCGGATTAATACCGCATACG-CCTAC-----------------GGGGGAAAACAGG-----GGATC--------TTC------G--GACCTTGTGCAATTG-GATGAGCCTGCGTTAGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCTATAGCTGGTCTGAGAGGATGATCAGCCACATCGGGACTGAGACACGGCCCGGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAATTGTGAAGAAGGGGTTTGTG-TTAATAGCGCG-GATC-TCT?ACGTTAACTTTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTGTTTAA-TCAGATGTGAAAGCCCCGGGCTCAACCTGGGAATGGCCTCTGATACTGGATAACT-AGAGTTTGGGAGAGGGGAGTAGAATT-TCAGGTGTAGCGGTGAAATGCATAGATATCTGAAGGAATACCAGTGGCGAAGG--CGACTCCCTGGCCTAAAACTGACGCTGAGGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCC-GGTAGTCCACGTCGTAAACGTAGTCAACTAGCCGTTGGGACTCTT---------GAAGTCTTAGTGGTGCAGCTAACGCATTAAGTT-GACCGCCTGGGGAGTACGGTCGC-AAGACTAAAACTCAAA-GGAATGACG-GGGGCCCTGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCATCTCTTGAC-ATCTAGAGAATCTGTTAGAGATAGTAGAGTGCCTTTGGGAACTC-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCCTATCCTTGGTTGCCAGCA-CATAATGGTGGGAACTCCAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGG-CCGGACGGGATGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTCGCAACCC--CGCGAGGGTGAGCTAATCCCACAAAGCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTTGGAATCGCTAGTAATCGTGGATCAGAA-TGCCACGGT?AATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGGTTGCATAAAGTTAGTTAGCTTAACCTTC------????GGTCGCTT-ACCACTTTCATATTCATGACTGGGGT?AAGTCGTAACAAGGTAGCCGTAGGG??A-----------ATCACCTCCTT-- Luteimonas_aestuarii ---------------------------------------------------------CATGC--AGTCGAACGGCAGCACAAG----------------------GGAG----------------------------------------------------------------------CTTGCT------CCCTGGGTGGCGAGTGGCGGACGGGTGAGGAATACATCGGAATCTGCCTATT-TGTGGGGGATAACGTAGGGAAACTTACGCTAATACCGCATACGACCTAC-----------------GGGTGAAAGCGGA-----GGACC--------TTC------G--GGCTTCGCGCAGATA-GATGAGCCGATGTCGGATTAGCTAGTTGGCGGGGTAAAGGCCCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGGGTGAAGAAGGCCTTCGGGTTGTAAAGCCCTTTTGTTGGGAAAGAAAAGCAATCGG-TTAATACCCGG-TTGT-TCTGACGGTACCCAAAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTCGTTAAGTCTGATGTGAAAGCCCTGGGCTCAACCTGGGAATTGCATTGGATACTGGCGGGCT-AGAGTGCGGTAGAGGGCAGTGGAATT-CCTGGTGTAGCAGTGAAATGCGTAGAGATCAGGAGGAACATCTGTGGCGAAGG--CGACTGCCTGGACCAGCACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAACTGGATGTTGGGTGCAAT-------T-TGGCACTCAGTATCGAAGCTAACGCGTTAAGTT-CGCCGCCTGGGGAGTACGGTCGC-AAGACTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGCCTTGAC-ATGCACGGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACCG-TGACACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CGTAATGGTGGGAACTCTAAGGAGACCGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGCCAGGGCTACACACGTACTACAATGGGAAGGACAGAGGGCTGCAAACC--CGCGAGGGCAAGCCAATCCCAGAAACCTTCTCTCAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGCAGGTAGCCTAACCTTC------GGGGGGGC------------------------------------------------------------------------------------ Lysobacter_koreensis ------------------CCCCGTC---GAGTGAA-CGCTGGCGGCAGGCCTAAC-ACATGC-AAGTCGAACGGCAGCACAGT---------------------AAGAG----------------------------------------------------------------------CTTGCTC-----TTATGGGTGGCGAGTGGCGGACGGGTGAGGAATACGTCGGAATCTGCCTATT-TGTGGGGGATAACGTAGGGAAACTTACGCTAATACCGCATACGACCTAC-----------------GGGTGAAAGCGGA-----GGACC--------TTC------G--GGCTTCGCGCAGATA-GATGAGCCGACGTCGGATTAGCTAGTTGGCGGGGTAAAGGCCCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTTGTCCGGAAAGAAAAGCACTCGG-TTAATACCCGG-GTGT-CATGACGGTACCGGAAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTTGTTAAGTCTGATGTGAAAGCCCTGGGCTCAACCTGGGAATGGCATTGGATACTGGCAATCT-AGAGTGCGGTAGAGGGGTGTGGAATT-CCCGGTGTAGCAGTGAAATGCGTAGATATCGGGAGGAACATCTGTGGCGAAGG--CGACACCCTGGACCAGCACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAACTGGATGTTGGGAGCAAC-------T-AGGCTCTCAGTATCGAAGCTAACGCGTTAAGTT-CGCCGCCTGGGAAGTACGGTCGC-AAGACTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGCCTTGAC-ATGTCGCGAATCCTTGAGAGATCGAGGAGTGCCTTCGGGAACGC-GAACACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CGTAATGGTGGGAACTCTAAGGAGACCGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGCCAGGGCTACACACGTACTACAATGGTAGGGACAGAGGGTCGCAAACT--CGCGAGAGCCAGCCAATCCCAGAAACCCTATCTCAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGCAGGTAGCTTAACCTTC------GGGAGGGCGCTT-GCCACGGTGTGGCAGATGACTGGG------------------------------------------------------- Methylobacter_whittenburyi -????????GAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGTAAC-----------------------------AG----------------------------------------------------------------------GCCTTC-------GGGCGCTGACGAGTGGCGGACGGGTGAGTAATGCGTAGGAATCTGCCTAGT-AGTGGGGGATAACTTGGGGAAACTCAAGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGACC--------TTC------G--GGCCTCGCGCTATGA-GATGAGCCTGCGTTAGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCTATAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATAGGGAGGAAAACCTGCCGG-TTAATACCCGG-CAGA-CTTGACATTACCTATAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGCGGTTAGGTAAGTCAGATGTGAAAGCCCCGGGCTTAACCTGGGAACTGCATTTGATACTGGGTAACT-AGAGTTTAATAGAGGAGAGTGGAATT-TCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAACACCAGTGGCGAAGG--CGCCTCTCTGGACACAAACTGACGCTGAGGTACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGTCTTATT-------C-GTAAGATTCGTGGCG-CACTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATCCATGGAATCTGTGAGAGATAGTAGAGTGCCTTCGGGAACTC-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTATCCTTAGTTGCCAGCA-CGTGATGGTGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCAGCGAACT--TGCGAAAGTCAGCCAATCCCAAAAAGCCGGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGAA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTGGGTAGTCTAACCTTC------GGGAGGGCGCTC-ACCACTTTGTGAT------------------------------------------------------------------ Methylocaldum_szegediense --------AGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCACAG-----------------------CCGG----------------------------------------------------------------------GTAACC-------GGTGGGTGGCGAGTGGCGGACGGGTGAGTAATGCGTAGGAATCTGCCTTGT-AGTGGGGGATAACCCGGGGAAACTCGGGCTAATACCGCATACGCTCTAT-----------------GGAGGAAAGCGGG-----GGACC--------TTC------G--GGCCTCGCGCTATGA-GATGAGCCTACGTCCGATTAGCTAGTTGGTAGGGTAATGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTAAGCGGGGAAGAAAGGCGGGAGG-CTAATACCCTC-TTGC-ACTGACGTTACCTGCAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTTGTTAAGTCAGCTGTGAAAGCCCTGGGCTCAACCTGGGAATGGCAGTTGATACTGGCGAGCT-TGAGTGTGGTAGAGGG{GT}TGTGGAATT-TCCGGTGTAGCAGTGAAATGCGTAGAGATCGGAAGGAACACCAGTGGCGAAGG--CGGCACCCTGGACCAACACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGAACTAGCCGTTGGGCACAAT-------T-GAGTGTTTAGTGGCGCAGCTAACGCGATAAGTT-CACCGCCTGGGGAGTACGGCCGC-AACGTTAAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATCTGGGGAACCCTTGAGAGATCGAGGGGTGCCTTCGGGAGCCC-CAAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG---TAAAGACGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGACCAGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTAGCCAAGC--CGTGAGGCGGAGCCAATCCCAGAAAGCCGATCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGCAGTCGGAATCGCTAGTAATCGCGGATCAGCA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGCAGGTAGTCTAACCTTC------GGGAGGGCGCTT-GCCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAA------------------------------------------- Methylococcus_capsulatus -?AACTGAAGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAAC-----------------------------AG----------------------------------------------------------------------GCCTTC-------GGGCGCTGACGAGTGGCGGACGGGTGAGTAATGCGTAGGAATCTGCCTTGT-TGTGGGGGATAACTCTGGGAAACCCGAGCTAATACCGCATACGCTTAAC-----------------GGATGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCTATAA-GATGAGCCTGCGTCGGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAGCAGGAAAGAAGGGCGGGGGT-TTAATACCATG-CCCA-CTTGACGTTACCTGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTAGATAAGTCAGATGTGAAAGCCCTGGGCTTAACCTGGGAACTGCATTTGATACTGTCAGGCT-CGAGTGTGATAGAGGGTAGTGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAACACCAGTGGCGAAGG--CGGCTCCCTGGACCAACACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGCGGGTTT---------AACCCTTTAGTGGCGC-ACTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGCCTTGAC-ATGCAGGGAATCCTGCAGAGATGCGGGAGTGCCTTCGGGAGCCA-AGACACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-GTTCGGGCTGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTAGCGAAGC--CGCGAGGTGGAGCAAGTCCCAGAAAGCCGGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGAA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGGTAGTCTAACCGCA------AGGAGGGCGCTT-ACCACGGTGTGATTCAT-------------------------------------------------------------- Methylomicrobium_agile -?TACTGAAGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGTAAC-----------------------------AG----------------------------------------------------------------------GCCTTC-------GGGCGCTGACGAGTGGCGGACGGGTGAGTAATGCGTAGGAATCTGCCTAGT-AGTGGGGGATAACTTGGGGAAACTCAAGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----?GACC--------TTC------G--GGCCT?GCGCTATGA-GATGAGCCTGCGTGGGATTAGCTAGTTGGTAGGGTAAAGGCCTACC--AAGGCGACGATCCCTAGCTGGTCTGAGAGGACGATCAGCCACGCTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATAGGAAGGAAAACCTGCCGG-TTAATACCCGG-CAGA-CTTGACATTACCTATAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA?TCGGAATTACTGGGCGTAAAGCGT-GCGTAGGCGGCTCCTTAAGTCAGATGTGAAAGCCCCGGGCTTAACCTGGGAACTGCATTTGATACTGGGTAACT-CGAGTTGAGTAGAGGAGAGGGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAACACCAGTGGCGAAGG--CGCCTCTCTGGCCTCAAACTGACGCTGAGGTACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGTCTTTAT-------A-AAGGTTTTCGTGGCG-CACTAACGCGTTAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATCCAGAGAATCTGTGAGAGATCGTAGAGTGCCTTCGGCAACTC-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCCTTAGTTGCCAACA-CGTGATGCTGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCAGCGAACT--CGCGAGAGCCAGCCAATCCCACAAAGCCGGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGAA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTGGGTAGTCTAACCTTC------GGGAGGGCGCTT-ACCACTTTGTGA------------------------------------------------------------------- Methylomonas_aurantiaca -??ACTGAAGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGTAAT-----------------------------AG----------------------------------------------------------------------GCCTTC-------GGGCGCTGACGAGTGGCGGACGGGTGAGTAATGCCTCGGAATCTGCCATGT-TGTGGGGGATAACTTGGGGAAACTCTTGCTAATACCGCATACGATCTAC-----------------GGATGAAAGCGGG-----GGACC--------TTC------G--GGCCTGGCGCTAATA-GATGAGCCTATGTTGGATTAGCTAGTTGGTGGGGTAAAGGCTTACC--TAGGCGACGAT?CGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACAGGGCCCAGACTCCTACTGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATAGGAAGGAATACCTGCCGG-TTAATACCCGG-TAGA-CTTGACATTACCTATACAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGCGGTGATTTAAGTCAGATGTGAAAGCCCTGGGCTTAACCTGGGAACTGCATTTGATACTGGGTCACT-AGAGTTGAGTAGAGGGGAGTGGAATT-TCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAACACCAGTGGCGAAGG--CGGCTCTCTGGACTCAAACTGACGCTGAGGTACGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAACTGTTGGGTTATTT---------AAGAACTTAGTAGTGGAGCTAACGTATTAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGCTAAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATCCAGAGGATCTGTTAGAGATAGCGGAGTGCCTTCGGGAGCTG-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCCCGTGTTGTG--AAATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCCTTAGTTGCCAGCG-AGTAATGTCGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCTATATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCAGCGAAAC--CGTGAGGTCAAGCAAATCCCACAAAGCCGGTCGTAGTCCGGATTGCACTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGAA-TGCCGCGGTGGATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTAAACCTTC------GGGAGGGCGCTT-ACCACTTTGTG-------------------------------------------------------------------- Methylomonas_methanica --------AGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGTAAC-----------------------------AG----------------------------------------------------------------------GCCTTC-------GGGCGCTGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTCAT-AGTGGGGGACAACTTGGGGAAACTCAAGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGACC--------TTC------G--GGCCTCGCGCTATGA-GATGAGCCTGCGTTGGATTAGCTAGTTGGTAGGGTACCGGCCTACC--AAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATAGGAAGGAATACCTGCCGG-TTAATACCCGG-TAGA--CTGACATTACCTATACAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGCGGTTGTTTAAGTCAGATGTGAAAGCCCTGGGCTTAACCTGGGAACTGCATTTGATACTGGGCAACT-AGAGTTTAGTAGAGGGGAGTGGAATT-TCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAACACCAGTGGCGAAGG--CGGCTCCCTGGACTAAAACTGACGCTGAGGTACGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAACTGTTGGGTTCTTA---------AAGAACTTAGTAGTGGAGCTAACGTATTAAGTT-GACCGCCTGGGGAGTACG?CCGC-AAGGTTAAAACTCAAA-??AATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGACCCTTACCTACCCTTGAC-ATCCAGAGAATCTGTTAGAGATAGCGGAGTGCCTTCGGGAGCTC-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTTGTG--AAATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTATCCTTAGTTGCCAGCG-GGTCATGCCGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCTGCGAACT--CGCGAGAGTAAGCTAATCCCAAAAAGCCGGTCCCAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGAA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGTTTAACCTTC------GGGAGGGCGCTT-ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAA----------------------------- Methylophaga_thalassica ---------------------------AGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGATGAAGA-------------------------ACAG----------------------------------------------------------------------CTTGCT--------GTTTCTGATTAGTGGCGGACGGGTGAGTAATGTATAGGGATCTGCCTAGT-AGTGGGGGACAACAGCCGGAAACGGCTGCTAATACCGCATACGCTCTAC-----------------GGAGGAAAGCGGG-----GGCTC--------GTA------A--GACCTCGTGCTATTA-GATGAACCTATATCAGATTAGCTAGTTGGTGGGGTAAGGGCCTACC--AAGGCGACGATCTGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAATAGGGAGGAAAGGTTATGCG-TTAATACCGTA-TAGC-TGTGACGTTACCTATAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTATTTAAGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTTGATACTGGATGGCT-AGAGTGTGGTAGAGGTGAGTGGAATT-TCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAACATCAGTGGCGAAGG--CGACTCACTGGGCCATTACTGACGCTGAGGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGGTGTATGGAGAATT-------T-ATTCTTTGTGTATCGAAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGTCGC-AAGACTAAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGCCTTGAC-ATGTACGGAAGATTGAAGAGATTCGATTGTGCCTTCGGGAACCG-TAACACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCCTGTCCTTAGTTGCCATCA---TTAAGTTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGCCAGGGCTACACACGTGCTACAATGGGCAGTACAAAGGGTTGCTAACT--CGCGAGGGTATGCTAATCCCATAAAGCTGTTCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGAA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGCTGCAAAAGAAGTAGGTAGACTAACCTTC------GGGAGGTCGCTT-ACCACTTTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCCTAGGGGAACC---------------------- Methylosphaera_hansonii ------------------------------TTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACGA-------------------------GCAG----------------------------------------------------------------------GCTTGC-------CTTCGCTGACGAGTGGCGGACGGGTGCGTAACGCGTGGGAATCTGCCTCTT-AGTGGGGGACAACACGGGGAAACCCTCGCTAATACCGCATACGCTCTACT----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GGCCTC?CGCTAACA-GATGAGCCTAAGTCAGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCTGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTAAGTTGGGAGGAAAATCTGGCGG-TTAATAGCCTT-AAGT-GTTGACGTTACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTGTTTAAGTCAGATGTGAAAGCCCCGGGCTTAACCTGGGAACTGCATTTGAGACTGGCAGGCT-AGAGTATGGTAGAGGGGAGTGGAATT-TCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAACACCAGTGGCGAAGG--CGACTTCCTGGACTCATACTGACGCTGAGGTACGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGTCACTT-------T-ACGAGTTTTGTAGCGAAGCTAACGTATTAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTAGCCTTGAC-ATTCAGAGAATCCGTTAGAGATAGTAGAGTGCCTTCGGAAGCTC-TGACACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-GGTTAAGCTGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCTGGTACAGAGGGTAGC-AAAT--CGCGAGAGTAAGCTAATCCCAGAAAGCCGATCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGAA-TGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGTCTAACCTTC------GGGAGGGCGCTT-ACCACTTTGTGATTGAT-------------------------------------------------------------- Natronocella_acetinitrilica -----------GTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAGCGGTAACA---------------------------GGC----------------------------------------------------------------------CCTTCG-------GGGCGCTGACGAGCGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCCATT-GGTGGGGGACAACCCGGGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCCAATG-GATGAGCCTGCGTCCGATTAGCTAGTTGGTAGGGTAAAAGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTAGGGAGGAAAAGCTTATGG-TTAATAGCTGT-GAGT-CTTGACGTTACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTCGTTAAGTTAGCTGTGAAAGCCCCGGGCTTAACCTGGGAATTGCAGTTAATACTGGCGAACT-AGAGTCTGGCAGAGGGCAGTGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGACTGCCTGGGCCAAGACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGAACTAGCCGTTGGGT?CATT-------T-AAGGGCTTAGTGGCGCAGCTAACGCATTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTTGCCAAGC--CGCGAGGTGGAGCTAATCCCAGAAAGCCGATCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGCACTGCTGCGGGGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGCTGCAAAAGAAGCAGGTAGTCTAACCTTC------GGGAGGACG----------------------------------------------------------------------------------- Nitrococcus_mobilis --------AGAGTTTGATTTATGGCTCAGATTGAA-CGCTGGCGGCA{AT}GCC{AT}AAC-{AC}CATGCGAAGTCGAGCGGCAGCAGCGC------------------------------------------------------------------------------------------------CTTTCTTCGGAAAGGTGGCTGGCGAGCGGCGGACGGGTGAGTAACGCGTGGGAATCTACCCTTC-GGTGGGGGATAGCCCGGGGAAACTCGGATTAATACCGCATACGCCCTAT-----------------GGGGGAAAGCGGG-----CCTCTG------CTTG------C--AAGCTCGCACCGATG-GATGAGCCCGCGTCCGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGGGTGAAGAAGGCTTGCGGGTTGTAAAGCCCTTTCAGCCGGGAGGAAAAGCATCGGG-TTAATACCTCG-ATGT-TTTGACGTTACCGGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-ATGTAGGCGGTCGAATAAGTCGGGTGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATCCGATACTGTTTGGCT-AGAGTCTGGTAGAGGGAGGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGTCTCCTGGATC{CT}TGACTG-CGCTGAGG-GCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGGGACTAG{CG}CGTTGGATTCATT-------T-ATGAGTCTAGTGGCGCAGCTAACGCTTTAAGTTCCTCC{CG}CCTGGGGAGTACGGCCGC-{AGT}AGGTTAAAACTCAAA-{AG}GAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTCTTGAC-ATCTCCGGAACCTTGCAGAGATGTGAGGGTGCCTTCGGGAACCG-GATGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGCCCTTAGTTACCAGCG-GTTCG-GCCGGGGACTCTAGGGGGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAAAGGGTTGCAAACC--CGTAAGGGGGAGCTAATCCCAAAAAGCCGGTCCCAGTCCGGATTGCAGT{CGT}TGCAACTCGACTGCATGAAAT{CG}GGAATCGCTAGTAATCGCG{AG}ATCAGCAATGCCGCGGTGAATACGTTCC{CGT}GGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTCGGCTG{CG}ACCAGAAGTCGGTAGTTAGACCTTCTTAGAAAGGGGGGCGCTG-CCCACGGTGGGT------------------------------------------------------------------- Nitrosococcus_halophilus --------AGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGGACGGCAGCAGCGC---------------------TTAAG----------------------------------------------------------------------CTTGCTT-----AGGCGGCTGGCGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGGCCTCT-AGAGGGGGATAACTCGGGGAAACTCGGGCTAATACCGCATATACTCTGA-----------------GGAGGAAAGCGGG-----GGACT--------TTC------G--GGCCTCGCGCTAGGG-GATGAGCCTGCGTCCGATTAGCTAGTTGGTGGGGTAAGGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAA?CCTGATCCAGCAATGCCGCGTGGGTGAAGAAGGCCTTCGGGTTGTAAAGCCCTTTCAGTGGGGAAGAAAAGCGGTGTG-TGAATAGCGCA-TCGT-ATTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGCGGCTTAGTAAGTTGGGTGTGAAAGCCCTGGGCTCAACCTGGGAATTGCACTTGATACTGCTGAGCT-AGAGTGTGGTAGAGGGAGGCGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGATATCGGAAGGAACACCAGTGGCGAAGG--CGGCCTCCTGGACCATAACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCGAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGACGTTGGGAGGGTA---------AGCCTTTCAGTGTTGTAGCCAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTTTTGAC-ATCCTCGGAACCCTGCAGAGATGCGGGGGTGCCTTCGGGAGCCG-GGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTACCTCTAGTTGCCAGCG-GTTAG-GCCGGGCACTCTAGGGGGACTGCCGTTGACAAAACGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGCCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTGGCCAAGC--AGCGATGCGGAGCTAATCTCAGAAAGCCGGTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCAATGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGCTGCACCAGAAGTAGGTGGCTTAACCTTC------GGGGGGGCGCTT-ACCACGGTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTT- Nitrosococcus_oceani -----------GTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCAGCAC---------------------CTAAG----------------------------------------------------------------------CTTGCTT-----AGGTGGCTGGCGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGGCCTCT-AGAGGGGGATAACTCGGGGAAACTCGGGCTAATACCGCATAATCTCTAA-----------------GGAGGAAAGCGGG-----GGACC--------GAA------A--GGCCTCGCGCTGGGG-GATGAGCCTGCGTCCGATTAGCTAGTTGGTGGGGTAAGGGCCTACC--AAGGCGATGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGGGTGAAGAAGGCTTTCGGGTTGTAAAGCCCTTTCAGTGGGGAAGAAAAGCGATGTG-TGAATAGCACA-TCGT-GTTGACGTTACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGCGGTTTGGTAAGTTGGGTGTGAAAGCCCCGGGCTCAACCTGGGAATGGCACTTGATACTGCCTGGCT-AGAGTATGGTTGAGGGAGGCGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGATATCGGAAGGAACACCAGTGGCGAAGG--CGGCCTCCTGGACCACTACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGACGTTGGGAGGGAT---------AGCCTTTCAGTGTTGCAGCTAACGCGTTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGCCTTGAC-ATCCCCGGAACTTTGCTGAGAGGCGAAGGTGCCTTCGGGAGCCG-GGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCTCTAGTTGCCAGCG-GTTCG-GCCGGGCACTCTAGAGGGACTGCCGTTGACAAAACGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGCCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTGGCCAAGC--AGCGATGCGGAGCTAATCTCAGAAAACCGGTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCAATGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTGGGTAGTTTAACCTTC------GGGAGGACGCTT-ACTACGGTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTAA- Piscirickettsia_salmonis --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGTGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAGCAGAT-----------------------CTAG----------------------------------------------------------------------CTTGCT-------AGATGCTGACGAGTGGCGGACGGGTGAGTAACGCGTGGGAATTTACCTTTT-AGTGGGGGATAACTTTAGGAAACTGAAGCTAATACCGCATAAGACCTGA-----------------GGGTTAAAGAGGG-----CCTCTA------TTTA------T--AAGCTCTTGCTAGGA-GATGAGCCCGCGTTGGATTAGCTAGTTGGTAGGGTAAAGGCTTACC--AAGGCGACGATCCATAGCTGGTTTGAGAGAATGGCCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGGAACCCTGATCCAGCAATGCCACGTGTGTGAAGAAGGCCTTAGGGTTGTAAAGCACTTTCAGCGGGGAGGAAGGTAAGCTAA-TTAATACTTGG-CTTA-ATTGACGTTACCTGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGCGGAAGATTAAGTTGGATGTGAAATCCCAGGGCTCAACCTTGGAACTGCATCCGAAACTGGTATTCT-AGAGTATGGTAGAGGAAAGTGGAATT-TCAGGTGTAGCGGTGAAATGCGTAGATATCTGAAGGAACACCGGTGGCGAAGG--CGACTTTCTGGATCAATACTGACGCTGAGGCGCGAAAGCATGGGT-AGCGAACAGGATTAGATACCCTGGTAGTCCATGCTGTAAACGATGTCAACTAGCCGTTGGATTCCCT-------TGAGGAGTTTAGTGGCGTAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGTC-GGGGGCCC-CACAAGCGGTGGAGCATGTGGTTTAATTCGAT-CAACGCGAAGAACCTTACCTGGTCTTGAC-ATCCTAAGAATTCT-CAGAGATGCGGAAGTGCCTTCGGGAGCTT-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCCTTAGTTGCCAGCA-CGTGATGGTGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGGGCGTACAGACGGAGGCGAAGC--AGCGATGTGGAGCGAACCTGAGAAAGCGCCTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGAATTGCACCAGAAGGGGCTAGGCTAACTTTA------GGGAGGCCGGTC-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTT-- Pseudoxanthomonas_spadix --------------------------------GAA-CGCTGGCGGTAGGCCTAAC-ACATGC-AAGTCGAACGGCAGCACAGT---------------------AAGAG----------------------------------------------------------------------CTTGCTC-----TTATGGGTGGCGAGTGGCGGACGGGTGAGGAATACATCGGAATCTACCTTTT-GGTGGGGGATAACGTAGGGAAACTTACGCTAATACCGCATACGCCCTTC-----------------GGGGGAAAGCCGG-----GGACC--------AGC------AATGGCCTGGTGCTGATA-GATGAGCCGATGTCGGATTAGCTAGTTGGTGAGGTAATGGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCCATACCGCGTGGGTGAAGAAGGCCTTCGGGTTGTAAAGCCCTTTTGTTGGGAAAGAAAAGCATTCGG-TTAATACCCGG-GTGT-TCTGACGGTACCCAAAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTGGTTTAAGTCCGTTGTGAAAGCCCTGGGCTCAACCTGGGAATTGCAGTGGATACTGGGTCACT-AGAGTGTGGTAGAGGATAGTGGAATT-TCCGGTGTAGCAGTGAAATGCGTAGAGATCGGAAGGAACATCTGTGGCGAAGG--CGACTATCTGGGCCAACACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAACTGGATGTTGGGTTCAAC-------T-TGGAACCCAGTATCGAAGCTAACGCGTTAAGTT-CGCCGCCTGGGGAGTACGGTCGC-AAGACTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATCCACGGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACCG-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CGTAAAGGTGGGAACTCTAAGGAGACCGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTACTACAATGGTCAGGACAGAGGGCTGCAAGCC--GGCGACGGTGAGCCAATCCCAGAAACCTGATCTCAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGCAGGTAGCTTAACCGCA------AGGAGGGCGCTT-GCCACGGTGTGGCCGATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCTTTC- Rhabdochromatium_marinum -----------------------------ATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGA?------------------------------AG----------------------------------------------------------------------GGATTC-------GTCCTGAGTAGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCTAC-AGTGGGGGACAACCCGGGGAAACCCGGGCTAATACCGCATACGACCTAC-----------------GGGTGAAAGGGGGC-----------------TTT------C--GGGCTCTCGCTGAAG-GATGAGCTCACGTCCGATTAGCTAGTTGGTGGGGTAAAGGCCCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGGCGGGTG-TTAATACCACC-GGCA-CTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGCTTAGTCAGTCAGATGTGAAAGCCCTGGGCTCAACCTGGGAACGGCATTTGATACTGCTAGGCT-TGAGTCTGGTAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACATCGGTGGCGAAGG--CGACCCCCTGGACCAAGACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCGACTAGCCGTTGGGCTCATA-------T-AAGAGTTTAGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCCAAGAATCCTGCGGAGACGCGGGAGTGCCCTCGGGAGCTT-GGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCAGCGAAGT--CGCGAGATGGAGCCAATCCCAGAAAACCGGTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTAGATAGCTTAACCTTC------GGGAGAGCGTTT-ACCACGGTGTGATCAATGACTGGGGTG---------------------------------------------------- Rheinheimera_chironomi -TGGATCCAGACTTTGA-TTATGGCTCAGATTGATACGCTGGCGGCAGGCCTAAC-ACATGC-AAGTCGAGCGGGG--------------------------------------------------------------------------------------------------------------------TTTTCGGACCTAGCGGCGGACGGGTGAGTAATGCGTAGGAAGCTACCCGAC-AGAGGGGGATACCAGTTGGAAACGACTGTTAATACCGCATAATGTCTAC-----------------GGACCAAAGTGTG-----GGACC--------TTC------G--GGCCACATGCTGTCG-GATGCGCCTACGTGGGATTAGCTAGTTGGTGAGGTAATGGCTCACC--AAGGCGACGATCCCTAGCTGGTTTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGCGAGGAGGAAGGGTTGGTCG-TTAATAGCGGC-TAAT-CTTGACGTTACTCGCAGAAGAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-ACGCAGGCGGTTGGTTAAGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTTGAAACTGGCCAACT-AGAGTACGTGAGAGGGGGGTAGAATT-CCAAGTGTAGCGGTGAAATGCGTAGAGATTTGGAGGAATACCAGTGGCGAAGG--CGGCCCCCTGGCACGATACTGACGCTCAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCTACTAGCTGTTCGTGGTCTT---------GTACTGTGAGTAGCGCAGCTAACGCACTAAGTA-GACCGCCTGGGGAGTACGGTCGC-AAGATTAAAACTCAAA-TGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGACGCAACGCGAAGAACCTTACCTACTCTTGAC-ATCTAGCGAAGATTGTAGAGATACGATTGTGCCTTCGGGAACGC-TAAGACAGGTGCTGCATGGCTTGT-CGTCAGCTCGTGTTGTG--AAATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCCTTAGTTGCCAGCA-CGTAATGGTGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGTACGTACAGAGGGAGGCAAGCT--GGCGACAGTGAGCGGATCTCTTAAAGCGTATCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCAAATCAGAA-TGTTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTC------GGGAGGGCGCTT-ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGCTAACCGTAG----------------------------- Sedimenticola_selenatireducens --------------GAT-CCTTGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGCAGCACGAG----------------------AGAG----------------------------------------------------------------------CTTGCTC------TCTTGGTGGCGAGTGGCGGACGGGTGAGTAACGCGTAAGAATCTGCCTAGT-AGTGGGGGATAACTCGGGGAAACTCGAGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGTGGG-----GGACC--------TTC------G--GGCCTCACGCTATTA-GATGAGCTTGCGTTGGATTAGCTAGTTGGTAGGGTAATGGCCTACC--AAGGCGACGATCCATAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGTAGGCAGCAGTGCCGGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAATTGTGAAGAAAAGCGGAAGG-CTAATACCCTT-CTGT-CTTGACGTTAACTTTAGAAGAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGGCGTAGGCGGTTTAGTAAGTCAGATGTGAAAGCCCTGGGCTTAACCTGGGAACTGCATTTGAAACTGCTGAACT-AGAGTGTGGTAGAGGGAAGTGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACACCAGTGGCGAAGG--CGACTTCCTGGACCAACACTGACGCTGAGGTACGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGTTGTTGGGAGCATC-------T-TGGCTCTTAGTAACGTAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTGCGAACTTTCTAGAGATAGATTGGTGCCTTCGGGAATCGCAGAGACAGGTGCTGCATGGC-TGTACGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGCCCTTAGTTGCCAGCACCGTAATGGTGGGAACTCTAGGGGGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGCCGGTGCAGAGGGCCGCAAACC--CGCGAGGGGGAGCAAATCTCACAAAACCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTTGGAATCGCTAGTAATCGCGAATCAGAA-TGTCGCGGTGAATACGTTCCCGGGCCTTGTTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGTCTAACCTTC------GGGAGGACGCTT-ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCCTAGGGGAACCTGCGGCTGGATCACCTCCTTA- Stenotrophomonas_maltophilia ----------------------------------A-CGCTGGCGGTAGGC-TAAC-ACATGC-AAGTCGAACGGCAGCACAGA----------------------GGAG----------------------------------------------------------------------CTTGCT------CTTTGGGTGGCGAGTGGCGGACGGGTGAGGAATACATCGGAATCTACTCTGT-CGTGGGGGATAACGTAGGGAAACTTACGCTAATACCGCATACGACCTAC-----------------GGGTGAAAGCAGG-----GGATC--------TTC------G--GACCTTGCGCGATTG-AATGAGCCGATGTCGGATTAGCTAGTTGGCGGGGTAAAGGCCCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAAGCAGT--GGGGA-{AT}ATTTGGCAATGGGCGCA{AC}{ACG}-TGAATCCAGCCATACCGCGTGGGTGAAGAAGG-CTTCGGGTTGTAAAGCCCTTTTGTTGGGAAAGAAATCCAGCCGGCTTA?TACCTGG-TTGG-GATGACGGTACCCAAAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTCGTTTAAGTCCGTTGTGAAAGCCCTGGGCTCAACCTGGGAACTGCAGTGGATACTGGACGACT-AGAGTGTGGTAGAGGGTAGCGGAATT-CCTGGTGTAGCAGTGAAATGCGTAGAGATCAGGAGGAACATCCATGGCGAAGG--CAGCTACCTGGACCAACACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAACTGGATGTTGGGTGCAAT-------T-TGGCACGCAGTATCGAAGCTAACGCGTTAAGTT-CGCCGCCTGGGGAGTACGGTCGC-AAGACTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGCCTTGAC-ATGTCGAGAACTTTCCAGAGATGGATCGGTGCCTTCGGGAACTC-GAACACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CGTAATGGTGGGAACTCTAAGGAGACCGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGCCAGGGCTACACACGTACTACAATGGTAGGGACAGAGGGCTGCAAGCC--GGCGACGGTAAGCCAATCCCAGAAACCCTATCTCAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGCAGGTAGCTTAACTTC-------GGGAGGGCGCTT--TCACGGTGTGGCCGATGACT---------------------------------------------------------- Sulfurivirga_caldicuralii -------TAGAGTTTGA-TCCTGGCTCAGAATGAA-CGCTGGCGGCAGGCCTAAG-ACATGC-AAGTCGAGCGGTAACAGAGG----------------------GGAG----------------------------------------------------------------------CTTGCTC------CCCTGCTGACGAGCGGCGAACGGGTGAGTAACACGTGGGAACCTGCCCTCT-GGTTGGGGATAACCTGGGGAAACCCAGGCTAATACCGAATAAGCTCTAC-----------------GGAGGAAAGTGGG-----CCTCTG------CTTG------C--AAGCTCACGCCAGAG-GATGGGCCCGCGGCGGATTAGCTAGTTGGTGAGGTAACGGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTC--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAGCAGGGAGGAAAAGCGTAGGG-TTAATACCCCT-GCGT-CTTGACGTTACCTGCAGAAGAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTATTCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGATTTGCAAGTCGGGTGTGAAAGCCCCGGGCTCAACCTGGGAACTGCATCCGAGACTGCAAGTCT-AGAGTACGGTAGAGGGTAGCGGAATT-CCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG--CGGCTACCTGGACCGATACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCGACTAGCTGTTGGGCTCATT-------T-AAGGGCTCAGTAGCGTAGCTAACGCGTTAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACACGAAGAACCTTACCCTCCCTTGAC-ATCCCCGGAAGGCGCCAGAGATGGCGCTGTGCCTTCGGGAACCG-GGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGCCGTTAGTTGCCATCG-GGTCATGCCGGGCACTCTAACGGGACTGCCGGTGATAAACCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCCTTATGGGAGGGGCTACACACGTGCTACAATGGGCAGGACAAAGGGTAGCCAACC--CGCGAGGGGGAGCCAATCCCAAAAACCTGCTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCTATGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTGGCTAGTCTAACCTTC------GGGAGG-------------------------------------------------------------------------------------- Suttonella_ornithocola ----------------------------GATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAGCAGATA----------------------AGAG----------------------------------------------------------------------CTTGCTC------TTATGCTGACGAGTGGCGGACGGGTGAGTAACGCATAGGAATCTGCCTATT-GGTGGGGGATAACGTAGGGAAACTTACGCTAATACCGCATAAGACCTAA-----------------GGGAGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCCGATA-GATGAGCCTATGTTGGATTAGCTAGATGGTGGGGTAAAGGCCTACC--ATGGCGACGATCCATAGCTGGTTTGAGAGGATGATCAGCCACATCGGGACTGAGACACGGCCCGAACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGGAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTAGTGAAGAAAAGGCAATAG-TTAATAGCTA--TTGA-TTTGACATTAGCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATTCGGAATGACTGGGCGTAAAGCGC-ACGCAGGCGGTTACTTAAGTCAGATGTGAAAGCCCCGGGCTTAACCTGGGAACTGCATTTGAAACTGAGTAACT-AGAGTATGTCAGAGGAAGGCGGAATT-TCCAGTGTAGCAGTGAAATGCGTAGAGATTGGAAGGAACACCGATGGCGAAGG--CAGCCTTCTGGGGCAATACTGACGCTCATGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGGCGTTGGGTACATT----------AGTGCTCGGTGCCGCAGCTAACGCATTAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GAAATTGAC-GGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGCCTTGAC-ATCCAGAGAACTTAGCAGAGATGCTTTGGTGCCTTCGGGAACTC-TGAGACAGGTGTTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCCTTACTTGCCAGCA-CTTTG-GGTGGGAACTATAAGGAGACTGCCGGTGACAAGCCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGTCTGGGCTACACACGTGCTACAATGGTCGGTACAAACGGTTGCCAAGT--CGCGAGACGGAGCTAATCTGAGAAAGCCGATCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGTCTTG-TACACACTGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGCTAGCTTATC-------------AGGGCGGTT-ACCACGGTGTGATTCATAACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACC---------------------- Tatlockia_maceachernii -------------------------------TGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCACGGT----------------------CTAG----------------------------------------------------------------------TTTACT------AGATGGGTGGCGAGTGGCGAACGGGTGAGTAACGCGTAGGAATATGCCTTAA-AGTTTGGGATAACATGGGGAAACTCATGCTAATACCGGATGAGCTCTTA-----------------GGAGGAAAGCTGG-----GGACCA------TTTA------T--GGCCTGGCGCTTTAA-GATTAGCCTGCGTCCGATTAGCTAGTTGGTGGGGTAAGGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGGAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAGTGGGGAGGAGGGATGATAGG-TTAAGAGCTAA-TTAT-CTGGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGT-GCGTAGGTGGTTTAGTAAGTTATCTGTGAAATTCCTGGGCTCAACCTAGGGTGGTCAGATAAGACTGCTGGACTAAGAGTATAGGAGAGGGTAGTGGAATT-TCCGGTGTAGCGGTGAAATGCGTAGAGATCGGAAGGAACACCAGTGGCGAAGG--CGGCTACCTGGCCTAATACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCAACTAGTTGTTGGCCTTATG-------A-ATGAGGTTAGTGACGAAGCAAACGCGATAAGTT-GACCGCCTGGGGAGTACGGTCGC-AAGATTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATACAGTGAATTCTGCAGAGATGCGGAAGTGCCGCGAGGAGCAC-TGCTACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTATTCTTAGTTACCATCG-CGTAGAGGCGGGGACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGCGGGGATGACGTCAAGTCATCATGGCCCTTACGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCGGCGAAGG--GGTGACCTGGAGCAAATCTTTGAAAGCTGGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGATAGTCTAACCTTA------GGGGGGACGTTT-ACCACGGTGTGATTCATGACTGGGGTGAAGTCGT--------------------------------------------- Thioalkalibacter_halophilus -----------GTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGAAACGATG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCAGGCGTCGAGTGGCGGACGGGTGAGTAACACATGGGAATCTGCCCTTA-GGTGGGGGATAACACGCGGAAACGTGTGCTAATACCGCATAATCTCTTC-----------------GGAGCAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCCAAAG-GATGAGCCCATGTCTGATTAGCTAGTTGGTGAGGTAATGGCTTACC--AAGGCGACGATCAGTAGCCGGCCTGAGAGGGTGGACGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTTATTGAGGAAGAATAGGTTGTCG-TTAATAGCGCC-AACA-CTTGACATTACTCAAAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGCGGATATTTAAGTCTGATGTGAAAGCCCTGGGCTTAACCTGGGAATGGCATTGGAAACTGAATATCT-AGAGTGTGGTAGAGGATAGTGGAATT-TCCAGTGTAGCGGTGAAATGCGTAGATATTGGAAAGAACACCGATGGCGAAGG--CAGCTATCTGGGCCAACACTGACGCTGAGGTACGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTTGTCGTTGGGGGAATT-------A-AATCCTTCAGTGACGGAGCTAACGCGTTAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATCCTGCGAACTTTCCAGAAATGGATTGGTGCCTTCGGGAACGC-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCCTATCCTTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGACCAGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTTGCCAAGC--CGCGAGGTGGAGCTAATCCTCCAAAGCCGATCTTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGCATTGCCACGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGCTAGTCTAACCTTC------GGGAGGACGGCT-ACCACGGTGTGATTCATGACTGGGGTGAAGTC----------------------------------------------- Thioalkalispira_microaerophila -----------------------------------------GCGGCATGCCTAAC-ACATGC-AAGTCGA?CGGT??CA--------------------------GGGG----------------------------------------------------------------------CTTCGG-------GCCCGCTGACGAGTGGCGGACGGGTGAGTAATGCATAGGAATCTGTC?AGT-AGTGGGGGACAACCTGGGGAAACTCAGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGTGGG-----GGACC--------TTG------G--GACCTCACGCTATTG-GATGAGCCTATGTCAGATTAGCTAGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCTGTAGCTGGTCTGAGAGGATGATCAGCAACACTGGTACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGG-CTGCGGGTTGTAAAGCACTTTCAGTTGGGAGGAAAAGCTGAGGC-TTAATACGCCT-TAGT-CTTGAC???ACCTTCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA-CGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGTGGTTTGTTAAGTCGGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTCGATACTGGCAGACT-AGAGTATGGTAGAGGGAAGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACACCAGTGGCGAAGG--CGGCTTCCTGGACCAATACTGACACTGAGGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGTTGTTGGAGAGGTA---------GACCTCTTAGTACCGCAGCTAACGCGATAAGTT-?ACCGCCTAGGGAGTACGGCCGC-AAGGTT{AG}AAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGAC-ATCCTCAGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACTG-AGAGACAGGTGCTGCATGGC-TGT--GTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTATCCATAGTTGCCAGCG-AGTAATGTCGGGAACTCTATGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTTGCCAAAC--CGCAAGGTGGAGCTAATCTCTTAAAACCGATCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCA-TGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGTACCAGAAGTCGCTAGTCTAACCTTC------GGGAGGACGGTG-CCCACGGTGTGGTC----------------------------------------------------------------- Thioalkalivibrio_denitrificans --------------------CTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCTAACGCG------------------------GGAG----------------------------------------------------------------------CTTGCT--------CCTGGCGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTGGT-GGTGGGGGACAA-CTGGGGAAACTCGAGCTAATACCGCATACG-CCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCCATCA-GATGAGCCTGCGTCCGATTAGCTTGTTGGTAGGGTAACGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGC?ATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTAGGGAAGAAAAGCCTGGCG-CCAATAACGCC-GGGT-CTTGACGTTACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-ACGTAGGCGGCCTTGTAAGTCGGATGTGAAAGCCCCGGGCTTAACCTGGGAATTGCATCCGATACTGCAGGGCT-AGAGTTTGGTAGAGGAGAGTGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGACTCTCTGGACCAAAACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGAACTAGCCGTTGGGAGGATTA------T-GTCCTC{CT}TAGTGGCGCAGCTAACGCATTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTCGCCAACC--CGCGAGGGGGAGCCAATCCCAGAAAGCTGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATTGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGCTGCACCAGAAGTGGATAGTCTAACCTTC------GGGAGGACGTTTCACCACGGTGTGGTCAATGATC---------------------------------------------------------- Thioalkalivibrio_jannaschii ------TGATTGTTTGA-TCCTGGCTCAGATTGAA-CGCTCGCGGTATGCTTA{CT}{CT}-TCATTT-T{CT}{CT}TCTAACGGTAACGCG------------------------GGAG----------------------------------------------------------------------CTTGCT--------CCTGGCGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTGGT-AGCGGAGGACAACTC-GGGAAACTCGAGCTAATACTGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCACTATCA-GATGAGCCTGCGTCCAATTAGCTTGTTGGTGAGGTAACGGCTCACC--AAGGCGACGATTGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTAGGGAAGAAAAGCCGACGG-CCAATACCCTT-CGGT-CTTGACATCACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-ACGCAGGCGGTCGTGTAAGTTAGATGTGAAAGCCCCGGGCTTAACCTGGGAA{AT}TGCACCTAATACTATACGACT-AGAGTTTGATAGGGGAGAGCGGAATTCCCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCTCTCTGGATCAAAACTGACGCTGAGGTGCGAAA{CG}{CG}{GT}{GT}GGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGTTGTTGGTCGGAAT-------T-TGCCGGTCAGTGACGCAGCTAACGCATTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATCCTCGGAACTTGTCAGAGATGACTTGGTG-CTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGCCAAGTCATCATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCTGCCAACC--CGCGAGGGGGAGCTAATCCCACAAAACCGGTCCTAGTCCAGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGCACTGCCACGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGACTGCACCAGAAGTGGATAGTCTAACCTCC------GGGAGGACGTTC-ACCACGGTGTGGTTAATA------------------------------------------------------------- Thiocapsa_roseopersicina -------TAGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------TCCTTC-------GGGGCGAGTAGAGTGGCGGACGGGTGAGTAACGCATGGGAATCTACCTCGA-CGTGGGGGATAACCCGGGGAAACTCGGGCTAATACCGCATACGACCTAC-----------------GGGTGAAAGGGGGC-----------------TTC----------GGCTCTCGCGGCGA-GATGAGCTCATGTCCGATTAGCTAGTTGGCGGGGTAAAGGCCCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAGCCTCGGGG-CGAATACCCTC-GGGG-GTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGC-ACGTAGGCGGCAACGTAAGTCAGATGTGAAAGCCCCGGGCTCAACCCGGGAACGGCATTTGAGACTGCGTCGCT-CGAGTCTGAGAGAGGGGGGTGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGAGATCCGGAGGAACACCAGTGGCGAAGG--CGGCCCCCTGGCTCAAGACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTAGCCGTGGGGTCCATT-------T-AAGGGCTTCGTGGCGCAGCTAACGCAATAAGTC-GACCGCCTGGGGAGTACGGCCGCAAAGGTTAAAACTCAAAGGGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTCGGAATCCTGCAGAGATGCGGGAGTGCCTTCGGGAGCCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGCCCTTAGTTGCCAGCG-AGTGATGTCGGGAAGTCTAAGGGGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTTGCCAACC--CGCGAGGGGGAGCCAATCTCAGAAAACCGGTCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGCAG-TAGCTTAACCTT-------??GAGGGCGCTT-GCCACGGTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAACCGTA------------------------------ Thiococcus_pfennigii -----------------------------ATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------GGCTTC-------GGCCTGAGTAGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCTGT-AGTGGGGGACAACCCGGGGAAACTCGGGCTAATACCGCATACGTCCTAC-----------------GGGAGAAAGGGGGC-----------------CTCTGCTTGC--AAGCTCCTGCTAGAG-GATGAGCCCACGTCCGATTAGCTAGTTGGTAGGGTAAAGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGTCTGAGG-TTAATACCCTT-GGAT-TTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGCGGCGAGATAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAATGGCATTTGATACTGTTTCGCT-CGAGTCTGGTAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACACCAGTGGCGAAGG--CGACCCCCTGGGCCAAGACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCGACTAGCCGTTGGATCCAAT-------T-AAGGGTTGAGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTTGGAATCCTGCAGAGATGTGGGAGTGCCTTCGGGAGCCA-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTTGCGAACC--CGCGAGGGGGAGCCAATCCCAGAAAACCGGTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTCGATAGCTTAACCTTC------GGGAGGGCGTTG-ACCACGGTGTGATCAATGACTGGGGTGA--------------------------------------------------- Thiocystis_violascens_DSM198 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AA----------------------------------------------------------------------GGCTTT-------GGCCTGAGTAGCGTGGCGGACGGGTGAGTAATGCGTGGGAATCTGCCTGGC-AGTGGGGGATAACCCGGGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGGGGGC-----------------TTC----------GGCTCTCGTTGCCA-GATGAGCCCACGTCCGATTAGCTTGTTGGCGGGGTAACGGCCCACC--AAGGCCGCGATCGGTCGCTGGTCTGAGAGGATGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGAAAGAAAAGCGGCTGG-TTAATACCCAG-TCGT-CTTGACGTTACTCACAAAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGCCCGGTCAGTCCGCTGTGAAAGCCCTGGGCTTAACCTGGGAACTGCAGTGGATACTGCCGCGCT-AGAGTGTGAAAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACACCAGTGGCGAAGG--CGGCCCCCTGGTTCAACACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCGGTAAACGATGTCGACTAGCCGTGGGGTCCATT-------T-AAGGGCTTCGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTCGGAATCCTGCGGAGACGCGGGAGTGCCTTCGGGAGCCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-CGTCATGGCGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTTGCGAGCC--CGCGAGGGGGAGCCAATCCCAGAAAACCGGTCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTCGATAGCCTAACCTTC------GGGAGGGCGTTG-ACCACGGTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCT------ Thiodictyon_bacillosum ---------------------------AGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------CCCTTT-------GGGGTGAGTAGAGTGGCGGACGGGTGAGTAATGTGTGGGAATCTGCCTTGC-AGTGGGGGACAACCCGGGGAAACTCGGGCTAATACCGCATACGTCCTAC-----------------GGGGGAAAGGGGGC-----------------CGC------A--AGGCTCTCGCTGCAA-GATGAGCCCACATCCGATTAGCTAGTTGGCAGGGTAAAGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAACGCCTTGAGG-TTAATACCCTT-GGGG-GTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGT-ACGTAGGCGGCACGATCAGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAACTGCATTTGATACTGTCGCGCT-CGAGTCTGAGAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACACCAGTGGCGAAGG--CGGCCCCCTGGCTCAAGACTGACGCTGAGGTACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCGACTAGCCGTTGGGTCCATT-------T-AAGGGCTTAGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTTGGAATCCTGCAGAGATGTGGGAGTGCCTTCGGGAGCCA-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGCCCTTAGTTGCCAGCA-CGTCATGGTGGGAACTCTAAGGGGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTCGCAAACC--CGCGAGGGGGAGCCAATCTCACAAAACCGGTCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTAGGTAGCTTAACCTTC------GGGAGGGCGCTT-ACCACGGTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACC------- Thiohalocapsa_halophila -----------------------------ATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------CTCTTC-------GGAGTGAGTAGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCTGT-AGTAGGGGACAACCCGGGGAAACTCGGGCTAATACCGCATACGTCCTAC-----------------GGGAGAAAGAGGGC-----------------CTT------C--GGGCTCTCGCTGCAG-GATGAGCCCGCGTCCGATTAGCTAGTTGGTAGGGTAATGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCCTGGGG-TTAATACCCCC-GGGT-CTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGC-ACGTAGGCGGCGAAGTCAGTCAGATGTGAAAGCCCTGGGCTCAACCTGGGAACTGCATTTGATACTGCTTGGCT-CGAGTCTGGTAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACATCAGTGGCGAAGG--CGGCCCCCTGGACCAAGACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTAGCCGTTGGGCTCATT-------T-AAGGGTTTAGTGGCGCAGCAAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTCGGAACTTGGCAGAGATGCCTTGGTGCCTTCGGGAGCCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGCTGCGAAGC--AGCGATGTGGAGCCAATCCCAGAAAACCGATCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTGGATAGCTTAACCTTC------GGGAGGGCGTT--------------------------------------------------------------------------------- Thiohalophilus_thiocyanatoxydans -----------------------------------------------------------------------CAGCAGCAG-------------------------AGAG----------------------------------------------------------------------CTTGCTC------TCTGGCTGGCGAGTGGCGGACGGGTGAGTAATGCATAGGAATCTGCCCAGT-AGTGGGGGACAACCTGGGGAAACTCAGGCTAATACCGCATACGACCTAC-----------------GGGTGAAAGTGGG-----GGATC--------TTC------G--GACCTCACGCTACTG-GATGAGCCTATGTCAGATTAGCTTGTTGGTGAGGTAAAGGCTCACC--AAGGCAACGATCTGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAACAGTGAAGAAAAGCTGACGG-TTAATACCCGT-CAGT-CTTGACATTAACTGTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTTGATAAGTCGGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTCGATACTGTCAGGCT-AGAGTATGGTAGAGGGAAGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACATCAGTGGCGAAGG--CGACTTCCTGGACCAATACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGGATATT---------AAATCTTTAGTGGCGTAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGG-CGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATCCTCAGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACTG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCTAACA-TTT---ATTGAGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGGTAGGGCTACACACGTGCTACAATGGACGGTACAGAGGGCCGCAAACC--CGCGAGGGGGAGCAAATCTCATAAAACCGTTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCGAATCAGAA-TGTCGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Thiophaeococcus_mangrovi --------------------------------------CTGGCGGCATGCCT-AC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------GCATTC-------GTGCTGAGTAGAGTGGCGGACGGGTGAGTAATGCGTGGGAATCTGCCTGGC-AGTGGGGGATAACCCGGGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGGGGGC-----------------TTC----------GGCTCTCGTTGCCA-GATGAGCTCACGTCCGATTAGCTAGTTGGTGGGGTAAGGGCCTACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAATTATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAGGGTTGGTG-ATAATACCGCC-GACT-GTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGC-ACGTAGGCGGTTGAGTCAGTCCGCTGTGAAATCCCCGGGCTTAACCTGGGAACTGCAGTGGATACTGCTTGACT-CGAGTCTGAGAGAGGAAGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACACCAGTGGCGAAGG--CGGCCTTCTGGCTCAAGACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGCTGTCGACTAGCCGTGGGGCTCATT-------T-AAGGGTTTCGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCTGACGAATCCTGCAGAGATGTGGGAGTGCCTTCGGGAGCGT-CAAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CTTTTGGGTGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTTGCGACCC--CGCGAGGGTGAGCCAATCTCAGAAAACCGGTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTGGATAGCTTAACCTTC------GGGAGAGCGTTT-ACCACGGTGTGA-CAATGACTGGGT------------------------------------------------------ Thioprofundum_hispidum -------------TTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGGTAACAGGCA---------------------AAAAG----------------------------------------------------------------------CTTGCTT-----TTTGCGCTGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCCGAT-AGTGGGGGACAACCTGGGGAAACCCAGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGGTGGCC---TCTCC--------TTG------G--AAGCTACCGCTATCG-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGAGGTAATGGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTAGGGAAGAAAAGCTCAAGG-CCAATACCCTT-GAGT-CTTGACGTTACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTTGGTAAGTCGGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTCGATACTGCCAGGCT-AGAGTATGGTAGAGGGAAGTGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACACCAGTGGCGAAGG--CGACTTCCTGGACCAATACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGGATATT-------AGAAATCCTTAGTGGCGCAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCACCCCTTGAC-ATCCTCGGAATCCTCCAGAGATGGAGGAGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGGGTGGGCTACACACGTGCTACAATGGGCGGTACAGAGGGTTGCCAACC--CGCGAGGGGGAGCCAATCCCAGAAAACCGTTCATAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGAA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTGGCTAGTCTAACCTTC------GGGAGGACGGTC-ACCACGGTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGA------------ Thiorhodococcus_minor -----------------------------ATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------TCCTTC-------GGGGTGAGTAGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCTAGT-GGTGGGGGATAACCCGGGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGGGGGC-----------------TTC----------GGCTCTCGCTGCTA-GATGAGCCCACGTCCGATTAGCTAGTTGGTGGGGTAAAGGCTCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTTGGGAAGAAAAGGTCGGTG-TTAATACCATT-GGCT-TTTGACGTTACCGACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGC-ACGTAGGCGGTTGAGTCAGTCAGCTGTGAAAGCCCCGGGCTTAACCTGGGAACTGCAGTTGATACTGCTCGACT-CGAGTCTGAGAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACACCAGTGGCGAAGG--CGGCCCCCTGGCTTAAGACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGCTGTCGACTAGCCGTGGGGCTCATT-------T-AAGGGTTTCGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTCGGGACTTGGCAGAGATGCCTTGGTGCCTTCGGGAGCCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTCGCGACCC--CGCGAGGGTGAGCCAATCTCAGAAAACCGATCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTAGATAGCCTAACCTTC------GGGAGGGCGTTT-ACCACGGTGTGGTCAATGACTGGGGTGA--------------------------------------------------- Thiorhodospira_sibirica_ATCC_700588 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGGTAAC-----------------------------AG----------------------------------------------------------------------GCCTTC-------GGGCGCTGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTGGT-AGTGGGGGATAACCCGGGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGTTATCA-GATGAGCCTGCGTCCGATTAGCTAGTTGGTGAGGTAATGGCTCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAGGAAAAGCTCAATG-TTAATACCATT-GGGT-CTTGACGTAACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-ACGTAGGTGGTTGTGTCAGTCAGATGTGAAAGCCCCGGGCTTAACCTGGGAACTGCATCTGATACTGCACGGCT-AGAGTTTGGTAGAGGAGGGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCTCTCTGGACTAAAACTGACACTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGAACTAGCCGTTGGGAGGATT-------T-AGCCTCTTAGTGGCGCAGCAAACGCATTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATCCTCGGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTATCCTTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCCAGTACAAAGGGTTGCCAACC--CGCGAGGGGGAGCTAATCTCAAAAAGCTGGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTAGGTAGTCTAACCTTC------GGGAGGGCGCTT-ACCACGGTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCT------ Thiorhodovibrio_winogradskyi -----------------------------ATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGCGAA------------------------------AG----------------------------------------------------------------------CCCTTC-------GGGGTAAGTAGAGTGGCGGACGGGTGAGTAAAGCGTGGGAATCTGCCCTAC-AGTGGGGGACAACCCGGGGAAACCCGGGCTAATACCGCATACGACCTAC-----------------GGGTGAAAGGGGGC-----------------TTT------C--GGGCTCTCGCTGAAG-GATGAGCTCACGTCCGATTAGCTAGTTGGTGGGGTAAAGGCCCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGTTGAGGG-TTAATACCCCT-TGGT-CTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGC-GCGTAGGCGGCTCAGTCAGTCAGATGTGAAAGCCCCGGGCTTAACCTGGGAATGGCATTTGATACTGCTAAGCT-TGAGTCTGGTAGAGGGGGGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACATCGGTGGCGAAGG--CGACCCCCTGGACCAAGACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCGACTAGCCGTTGGGCTCATT-------T-AAGAGTTTAGTGGCGCAGCTAACGCGATAAGTC-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTCGGAACAAGGCAGAGATGCCTTGGTGCCTTCGGGAGCCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTTGCGAAGC--CGCGAGGTGAAGCCAATCCCAGAAAACCGGTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTAGATAGCTTAACCTTC------GGGAGGGCGTTT-ACCACGGTGTGATCAATGACTGGGGTGAAGT------------------------------------------------ Thiothrix_flexilis -----------------------------ATTGAA-CGCTGGCGGTATGCTTAAG-ACATGC-AAGTCGAACGGTAG-------------------------------------------------------------------------------------------------------TCCCT-------TCGGGGATGAGAGTGGCGCACGGGTGAGTAACACGTGGGAATCTACCCAGT-AGCGGGGGATAGCCTGGAGAAATCCAGATTAATACCGCATACGCTCTAC-----------------GGAGGAAAG-------------------------------G--CTTCGGCCACTATTG-GATGAGCCCGCGTTGGATTAGGTAGTTGGTGAGGTAAAGGCTCACC--AAGCCTGCGATCCATAGCTGGTCTGAGAGGATGATCAGCCACATCGGAACTGAGACACGGTCCGGACTCCTACGGG-AGGCAGCAGTC--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCGCTAGGGACGATAA----------------------------TGACGGTACCTAGATAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGTGGTTTATTAAGTCAGATGTGAAATCCCTGGGCTCAACCTAGGCACTGCATCTGATACTGGTAGACT-AGAATGTGGGAGAGGGAAGTGGAATT-TCCGGTGTAGCGGTGAAATGCATAGAGATCGGAAGGAACATCAGTGGCGAAGG--CGACTTCCTGGACCAACATTGACACTGAGGTGCGAAGGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCGGTAAACGATGTCAACTAGCCGTTGGGTTCGAT-------T-TAGGATTCAGTGGTGCAGCTAACGCATTAAGTT-GACCGCCTGGGGAGTACGCTCGC-AAGAGTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATGGCAGGAATCCCTGAGAGATTGGGGAGTGCCGCAAGGAACCT-GCACACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCCTGTCCCTAGTTGCCAGCA-CGTAAAGGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGGCTGGGCTACACACGTGCTACAATGGCCAGTACAGAGGGACGCGAGAC--CGCGAGGTGGAGCAAATCCCAGAAAGCTGGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGAA-CGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGCAGGTAGCTTAACCGAA------AGGAGGGCGCTT-GCCACGGTGTGGCCGATGACTGGGGTG---------------------------------------------------- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._BT_S243 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTCGGATTAGCTTGTTGGTAGGGTAATGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAATAGGGAAGAAATGCCTGAGG-TTAATACCCGC-AGGT-TTTGACGTTACCTAAAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTTTGGTAAGTCGGATGTGAAAGCCCTGGGCTTAACCTAGGAATTGCATTTGATACTGCCAGACT-AGAGTACGGTAGAGGGAAGTGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGATTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGAGCATT-------G-AAGCTTTTAGTGGCGAAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGAATCCCACGGAAACGTGGGAGTGCCTTCGGGAGCCG-AGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FB_S136 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGGGTGAGTAATGCGTAGGAATCTGCCCGAT-TGTGGGGGACAACCCGGGGAAACCCGGGCTAATACCGCATGCGATCTTCCACCTA--------TGTGGGGGATGAAAGG-----GGGG---------CTT------C--GGCCTCTCGCTGTCG-GATGAGCCTACGTCGGATTAGCTTGTTGGTGGGGTAATGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAGATCCAAGG-TTAATACCCTC-GGGT-TCTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTTCGGTAAGTCGGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTCGATACTGCCGAGCT-AGAGTACGGTAGAGGGAGGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCCTCCTGGACTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------T-AAGCCCTTAGTGGCGAAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGAATCCTGCAGAGATGCAGGAGTGCCTTCGGGAACCG-AGTGACAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FBG_S435 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCGCGCTATTG-GATGAGCCTACGTCGGATTAGCTAGTTGGTAGGGTAATGGCCT{AT}CCTAA{AG}{AG}{AC}AGA{AC}GATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTG{GT}{GT}ACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAATGGGGAAGAAAAGCTCCGGG-TCAATACCCCG-GAGT-CTTGACGTTACCTGGAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTTGTGTAAGTCGGATGTGAAATCCCCGGGCTTAACTTGGGAACTGCATTCGATACTGCTCAGCT-AGAGTACGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCTTTCTGGGCCGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGCATT-------T-AAGCCCTTTGTGGCGTAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGACCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACTTGCCAGAGATGGCGAGGCGCCTTCGGGAACCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTACCAGCG-GTTCG-G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FM_BZ176 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCCCGAGG-TTAATACCCTC-GGGT-TCTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTTTGATAAGTCGGATGTGAAAGCCCCGGGCTTAACCCGGGAATTGCATTCGATACTGTCAGACT-AGAGTACAGTAGAGGGAGGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGACTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGAGGCATT-------A-AAGCCTTTAGTGGCGTAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FW_BZ106 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTAAGGAAGAAAGGTCCGTGG-TTAATACCTGC-GGAT-TTTGACGTTACTTAGAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTTTAGTAAGTCGGATGTGAAAGCCCCGGGCTTAACCTGGGAACTGCGTTCGATACTGCTGAGCT-AGAGTACGGTAGAGGGAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGACTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGAGTATT-------G-AAGCTTTTGGTGGCGTAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FW_BZ131 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTAAGGAAGAAAGGTCCGAGG-TTAATACCCGC-GGAT-TTTGACGTTACTTAGAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTTTAGTAAGTCGGATGTGAAAGCCCTGGGCTTAACCTGGGAACTGCGTTCGATACTGCTGAGCT-AGAGTACGGTAGAGGGAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGACTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGAGTATT-------G-AAGCTTTTGGTGGCGTAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-CATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._G_BZ185 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCCCGAGG-TTAATACCCTC-GGGT-TCTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTTTGATAAGTCGGATGTGAAAGCCCCGGGCTTAACCCGGGAATTGCATTCGATACTGTCAGACT-AGAGTACAGTAGAGGGAGGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGACTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGAGGCATT-------A-AAGCCTTTAGTGGCGTAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGACCATCCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._H_SA2B15 ----CTGAAGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACGGGG-----------------------GGAA--------------------------------------------------------------------GCTTGCTT-------CCTTGCCGACGAGTGGCGGACGGGTGAGTAATGCGTAGGAATCTACCTAGC-AGTGGGGGATAACCCAGGGAAACCCGGGCTAATACCGCATGCGATTTTCCATTTAACTAAAATAGTGGGGAATGAAAGA-----GGGGC--------TTA------T--GCCTCATCGCTGTTG-GATGAGCCTACGTCGGATTAGCTAGTTGGTAGGGTAACGGCCTACC--AAGGCGGCGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCCAAGGG-TTAATATCCTT-TGGC-CTTGACGTTACCCACAAAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTTTGGTAAGTCGGATGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGATACTGTCAGACT-AGAGTACGGTAGAGGGAGGTGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGGGGAACATCAGTGGCGAAGG--CGGCCTCCTGGACTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGCATT-------A-AAGCCTTTAGTGGCGTAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGGATCCTGTAGAGATGCAGGAGTGCCTTCGGGAACTG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAACG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCTGCGAGCC--CGTGAGGGGGAGCTAATCCCAGAAAACCGGTTGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTTGGAATCGCTAGTAATCGCGGATCAGCA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTGAGCTGCTTAACCTCC------GGGAGGGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGTGGCTGGATCACCTCCTTT- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._LFY_BY7 ----CTGAAGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACGGGG-----------------------GAGA----------------------------------------------------------------------TTTATC-------TCCTGCCGACGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTACCCGGC-AGTGGGGGACAACTCGGGGAAACTCGAGCTAATACCGCATATATTTCTTTGTTCG---AAAGGATAAAGAAGGAAAGGG-----GGGTC--------TTT------G--ACCTCATCGCTGTCGTGATGAGCCTGCGTCGGATTAGCTTGTTGGTGGGGTAATGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTATGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAGAGCCTGAGG-TTAATATCCTT-GGGTCTTTGACGTTACCCAAAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGCTTAGTAAGTCGGGTGTGAAAGCCCCGGGCTTAACCTGGGAATTGCATTCGATACTGCTAGGCT-AGAGTACGGTAGAGGGAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTTCTGGATCGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGCATT-------A-AAGCTTTTGGTGGCGTAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTTGGAATTCTGTGGAAACGCGGAAGTGCCTTCGGGAGCCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAGGGGGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCTTTATAAGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGAGTTGCGAACC--TGTGAGGGTAAGCTAATCCCGGAAAGCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGGTTGCTTAACTTTC------GAGAGGGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTT- 'Thiotrophic ectosymbiont of Kentrophoros sp. LPFa_S313' ----CTGAAGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGTAACGGGA-----------------------GAGA----------------------------------------------------------------------TTTATC-------TCTTGCCGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTAGC-AGTGGGGGACAACTTGGGGAAACTCGAGCTAATACCGCATATATTTCTTTATCTT-----GAAGGTAGAGAAGGAAAGG-----GGGGT--------CTT------T--GGCCTCTCGCTGTTA-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGGGGTAACGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAATAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAGGTCCGAGG-TTAATACCCTCTGGGC-TTTGACGTTACCCAAAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGCTTGGTAAGTCGGGTGTGAAAGCCCTGGGCTTAACCTGGGAATGGCATTCGATACTGCTAAGCT-AGAGTACGGTAGAGGGAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGACTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGAGCGTT-------A-GAGCTCTTAGTGGCGAAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTTGGAACCCCACGGAGACGTGGGGGTGCCTTCGGGAGCCA-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCCTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCTTTATAAGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGAGTCGCGAACC--TGTGAGGGTAAGCTAATCCCGGAAAGCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGAA-CGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGGTTGCTTAACTTTC------GAGAGGGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTT- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._SD_S127 ----CTGAAGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACGGAA-----------------------GAGA----------------------------------------------------------------------TTTATC-------TCTTGCCGACGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCTTGC-AGTGGGGGATAACTCGGGGAAACTCGAGCTAATACCGCATATATTTCCTTGCTTT------AGGGTGAGGAAGGAAAGG-----GGGGC--------TTC------G--GCCTCATCGCTGTAA-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGGGGTAATGGCCTACC--AAGGCTGCGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGTGAAAACCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAATGTCCAAGG-TTAATACCCTT-GGAT-CTTGACGTTACCCAAAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGCTTAGCAAGTCGGGTGTGAAAGCCCCGGGCTTAACCTGGGAATGGCATTCGATACTGCTAGGCT-AGAGTACGGTAGAGGGAAGCGGAATT-CTCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGATCGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGAAACATT-------A-AAGTTTTTGGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGAATTCTGCGGAAACGTGGAAGTGCCTTCGGGAGCCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCTTTATGAGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGAGTCGCGAACC--CGTGAGGGTAAGCTAATCCCGAAAAGCCGGTCGTAGTCCAGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCA-CGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGGTTGCTTAACTTTC------GAGAGGGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTT- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._TC_BZ126 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAGGTCTGGGG-TTAATACCCTCTGGAT-TTTGACGTTACCCAAAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGCTTGGTAAGTCGGGTGTGAAAGCCCTGGGCTTAACCTAGGAGTTGCATTCGATACTGCCAGGCT-AGAGTACGGTAGAGGGAGGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGATCGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGAGCGTT-------A-GAGCTCTTAGTGGCGAAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._TUN_BY2 ----CTGAAGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACGGA------------------------AGAG----------------------------------------------------------------------TTTACT--------CTTGCCGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTACCTGAC-AGTGGGGGACAACTCGGGGAAACTCGAGCTAATACCGCATACGTTCCTGGGCCTC---AAATGGG-CTGAGGAAGAAAG-----AGGGG--------CTT------T--AGCCTCGTGCTGTTA-GATGAGCCTGCGTCGGATTAGCTTGTTGGTAGGGTAATGGCCTACC--AAGGCAACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTTGGGTTGTAAAGCACTTTTAGTGGGGAAGAAAGGCCAGCGG-TTAATACCCGC-CGGT-TTTGACGTTACCCAAAGAAAAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGCTTGATAAGTCGGGTGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTCGATACTGTTAAGCT-AGAGTACAATAGAGGGGAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGATTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGAGTATT-------G-AAACTTTTGGTGGCGTAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGAATCCTGCGGAAACGTGGGAGTGCCTTCGGGAGCCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCCTGTCCCTAGTTGCCAGCG-GTTTG-GCCGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCTTTATAAGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGAGTCGCGAGTT--CGTGAGAAGGAGCTAATCTCAGAAAGCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGAA-CGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGGTTGCTTAACTTTC------GAGAGGGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTT- Thiotrophic_ectosymbiont_of_Kentrophoros_sp._UNK_BY8 ----CTGAAGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGTAACGGGA-----------------------GAGA----------------------------------------------------------------------TTTGTC-------TCTTGCCGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTGGC-AGTGGGGGACAACTTGGGGAAACTCGAGCTAATACCGCATATATTTCTTTATCTT-----GAAGGTAGAGAAGGAAAGG-----GGGGT--------CTT------T--GGCCTCTCGCTGTTA-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGGGGTAACGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAATAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAGGTCCGAGG-TTAATACCTTCTGGGC-TTTGACGTTACCCAAAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGCTTGGTAAGTCGGGTGTGAAAGCCCCGGGCTCAACCTGGGAATGGCATTCGATACTGCTAAGCT-AGAGTATGGTAGAGGGAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGACTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGAGCGTT-------A-GAGCTCTTAGTGGCGAAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTTGGAACCCCACGGAGACGTGGGGGTGCCTTCGGGAGCCA-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCCTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCTTTATAAGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGAGTCGCGAACC--TGTGAGGGTAAGCTAATCCCGGAAAGCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGAA-CGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGGTTGCTTAACTTTC------GAGAGGGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTT- Xanthomonas_perforans -------------TTGA-TCCTGGCTCAGAGTGAA-CGCTGGCGGCAGGCCTAAC-ACATGC-AAGTCGAACGGCAGCACAGT---------------------AAGAG----------------------------------------------------------------------CTTGCTC-----TTATGGGTGGCGAGTGGCGGACGGGTGAGGAATACATCGGAATCTACTCTTT-CGTGGGGGATAACGTAGGGAAACTTACGCTAATACCGCATACGACCTAC-----------------GGGTGAAAGCGGA-----GGACC--------TTC------G--GGCTTCGCGCGGTTG-AATGAGCCGATGTCGGATTAGCTAGTTGGCGGGGTAAAGGCCCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGGGTGAAGAAGGCCTTCGGGTTGTAAAGCCCTTTTGTTGGGAAAGAAAAGCAGTCGG-TTAATACCCGA-TTGT-TCTGACGGTACCCAAAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTGGTTTAAGTCTGTTGTGAAAGCCCTGGGCTCAACCTGGGAATTGCAGTGGATACTGGATCACT-AGAGTGTGGTAGAGGGTAGCGGAATT-CCCGGTGTAGCAGTGAAATGCGTAGAGATCGGGAGGAACATCCGTGGCGAAGG--CGGCTACCTGGACCAACACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAACTGGATGTTGGGTGCAAT-------T-TGGCACGCAGTATCGAAGCTAACGCGTTAAGTT-CGCCGCCTGGGGAGTACGGTCGC-AAGACTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATCCACGGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACCG-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CGTAATGGTGGGAACTCTAAGGAGACCGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTACTACAATGGTAGGGACAGAGGGCTGCAAACC--CGCGAGGGCAAGCCAATCCCAGAAACCCTATCTCAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCGGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGCAGGTAGCTTAACCTTC------GGGAGGGCGCTT-GCCACGGTGTGGCCGATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTT-- Xanthomonas_theicola ------------------------------------CGCTGGCGGCAGGCCTAAC-ACATGC-AAGTCGAACGGCAGCACAGT---------------------GGTAG----------------------------------------------------------------------C--AATA-----CCATGGGTGGCGAGTGGCGGACGGGTGAGGAATACATCGGAATCTACCTTTT-CGTGGGGGATAACGTAGGGAAACTTACGCTAATACCGCATACGACCTTA-----------------GGGTGAAAGCGGA-----GGACC--------TTC------G--GGCTTCGCGCGGATA-GATGAGCCGATGTCGGATTAGCTAGTTGGCGGGGTAAAGGCCCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGGGTGAAGAAGGCCTTCGGGTTGTAAAGCCCTTTTGTTGGGAAAGAAAAGCAGTCGG-TTAATACCCGA-TTGT-TCTGACGGTACCCAAAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTGTTTAAGTCCGTTGTGAAAGCCCTGGGCTCAACCTGGGAATTGCAGTGGATACTGGGCAACT-AGAGTGTGGTAGAGGATGGCGGAATT-CCCGGTGTAGCAGTGAAATGCGTAGAGATCGGGAGGAACATCTGTGGCGAAGG--CGGCCATCTGGACCAACACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAACTGGATGTTGGGTGCAAC-------T-TGGCACGCAGTATCGAAGCTAACGCGTTAAGTT-CGCCGCCTGGGGAGTACGGTCGC-AAGACTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATCCACGGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACCG-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CGTCATGGTGGGAACTTTAAGGAGACCGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTACTACAATGGTGAGGACAGAGGGCTGCAAACT--CGCGAGAGTGAGCCAATCCCAGAAACCTCATCTCAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGCAGGTAGCTTAACCTT--------------------------------------------------------------------------------------------------- Xylella_fastidiosa --------AGAGTTTGA-TCCTGGCTCAGAGTGAA-CGCTGGCGGCAGGCCTAAC-ACATGC-AAGTCGGACGGCAGCACATT---------------------GGTAG------------------------------------------------------------------------TAATA-----CCATGGGTGGCGAGTGGCGGACGGGTGAGGAATACATCGGAATCTACCTTAT-CGTGGGGGACAACGTAGGGAAACTTACGCTAATACCGCATACGACCTAC-----------------GGGTGAAAGCAGG-----GGACC--------TTA------G--GGCCTTGTGCGATTG-GATGAGCCGATGTCCGATTAGCTAGTTGGTGAGGTAAAGGCTCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCTATGCCGCGTGGGTGAAGAATGCCTTCGGGTTGTAAAGCCCTTTTGTTGGGGAAGAAAGGCAATTGG-TTAATACCTAG-TTGT-TATGACGGTACCCAAAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGGGT-GCGTAGGTGGTTATTTAAGTCTGTTGTGAAAGCCCTGGGCTTAACCTGGGAATGGCAGTGGATACTGGATAGCT-AGAGTGTGGTAGAGGGTAGCGGAATT-CCTGGTGTAGCAGTGAAATGCGTAGAGATCAGGAGGAACATCCGTGGCGAAGG--CGGCTACCTGGGCCAACACTGACACTGAGGCACGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAACTGGATGTTGAGTGCAAA-------T-TGGCACTCAGTATCGAAGCTAACGCGTTAAGTT-CGCCGCCTGGGGAGTACGGTCGC-AAGACTGAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATCTGCGGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAGCCG-TGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CGTAATGGTGGGAACTTTAAGGAGACTGCCGGTGACAAATCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTACTACAATGGTAGGGACAGAGGGCTGCAATCT--CGCGAGGGTGAGCTAATCCCAGAAACCCTATCTCAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATTGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTTTGTTGCACCAGAAGCAGGTAGCTTAACCGCG------AGGAGGGCGCTT-GCCACGGTGTGGCCGATGACTGGGGTGAAGTCGTGACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTT-- endosymbiont_ex_Escarpia_spicata CT---------------------------AATTGA-CGTGCAGGTGATGCTTAACAACATGC-AAGTCGAACGGTAACGAT------------------------GGAG----------------------------------------------------------------------CTTGCT-------TCCAGGCGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTAGT-AGTGAGGGACAACTCGGAGAAATCCGAGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCTATTA-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGAGGTAATGGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAATTGTGAAGAAAAGCTTAGAG-TTAATAGCTCT-GGGT-CTTGACGTTAACTTTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTTGGTAAGTCAGATGTGAAAGCCCTGGGCTCAACCTGGGAACTGCATTTGATACTGCCTGACT-AGAGTGTGGTAGAGGGAAGTGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACATCAGTGGCGAAGG--CGACTTCCTGGACCAACACTGACGCTGAGGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCTGTTGGGCTCATTA------T-AAGGGTTTAGTGGCGAAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATTGACAGAATCCTGTAGAGATACGGGAGTGCCTTCGGG-CCTG-GAAAACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CATAATGGTGGGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCTGCAAACCCGCGCGAGGGGGAGCTAATCTCAGAAAACCGGTCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTGGGTAGGTTAACCTCC------GAGGGGTCACCC--------------------CTTGGGT------------------------------------------------CCAT- endosymbiont_ex_Ifremeria_nautilei ----------------------------------------------------------------AGTCGAACGCGAAAG--------------------------AGAT----------------------------------------------------------------------CTTCGG-------ATCTTGAGTAGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTAGT-AGTGGGGGATAGCCCGGAGAAATCCGGATTAATACCGCATACGCCCTAC-----------------GGGGGAAAGATGGCC---TCTTC--------TTG------A--AAGCTATCACTATTA-GATGAGCCTGCGTCGGATTAGCTAGTTGGTGAGGTAATGGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGGCTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGAGCGAAAGCTTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCTTAAGG-TTAATACCCTT-GAGT-CTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTTAGTCAGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAACTGCATTTGATACTGCTGAACT-AGAGTATGGTAGAGGGAAGTGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACACCAGTGGCGAAGG--CGACTTCCTGGACCAATACTGACGCTGAGGCGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGCTCATTT------T-AAGGGCTTAGTGGCGCAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGTCGC-AAGATTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTGGGAAGGCTTTAGAGATAAAGCTGTGCCTTCGGGAACCC-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCCTGTCCTTAGTTGCCAGCG-AGTAATGTCGGGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTTGCCAACC--CGCGAGGGGGAGCTAATCCCAGAAAACCGGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGAA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTGGGTAGTCTAACCTTCC-----GGGAGGGCGCTC---CAC-------------------------------------------------------------------------- endosymbiont_of_Lamellibrachia_columna ------------------------TGCTAGTTGA---CGCTGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGTAACGATG-----------------------GAAG----------------------------------------------------------------------CTTGCT-------TCCAGGCGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTAGT-AGTGGGGGACAACTCGGAGAAATCCGAGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCTATTA-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGAGGTAATGGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAATTGTGAAGAAAAGCCTAGAG-TTAATAGCTCT-GGGT-CTTGACGTTAACTTTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTTGGTAAGTCAGATGTGAAAGCCCTGGGCTCAACCTGGGAACTGCATTTGATACTGCCTGACT-AGAGTGTGGTAGAGGGAAGTGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACATCAGTGGCGAAGG--CGACTTCCTGGACCAACACTGACGCTGAGGTGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCTGTTGGGCTCATTA------T-AAGGGTTTAGTGGCGAAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACCCTTGAC-ATCCTCAGAACTTGTTAGAGATAACTTGGTGCCTTCGGGAATTG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCATAGTTGCCAGCA-CGTAATGGTGGGAACTCTATGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCCGCAAACC--CGCGAGGGGGAGCTAATCTCAGAAAACCGGTCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTGGGTAGCTTACCCTTC------GGGAGGACGCTC-ACCACTTGG------ATCATTGGG------------------------------------------------------- gamma_proteobacterium_ectosymbiont_ex_Rimicaris_exoculata --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGAAACGCGA-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CTTTGGCGTCGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTACTCAGT-AGTGGGGGATAGCCAGGAGAAATTCTGATTAATACCGCATACGATCTAC-----------------GGATGAAAGGTGG-----CCTCTA------CATG------T--AAGCTATCGCTATTG-AATGAGCCCGCGTTAGATTAGCTAGTTGGTAGGGTAAAGGCCTACC--AAGGCGACGATCTATAGCTGGTCTGAGAGGACGACCAGCCACATCGGGACTGAGACACGGCCCGGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATTGTGAAGAAGAGATTAAGA-TTAATACTTTT-GATC-TTTGACGTTAACTTTAGAAGAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTAGATAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCTGATACTGTTTAACT-AGAGTTTGGGAGAGGGAAGTAGAATT-TCAGGTGTAGCGGTGAAATGCATAGAGATCTGAAGGAATACCAGTGGCGAAGG--CGACTTCCTGGCCTAAAACTGACGCTGAGGTGCGAAAGCGTGGGT-AGCAAACGGGATTAGATACCCCGGTAGTCCACGCCGTAAACGATGTCAACTAGTCGTTGGTCTCCTT---------GAGGGATCAGTGACGCAGCTAACGCATTAAGTT-GACCGCCTGGGGAGTACGGTCGC-AAGACTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCATCCCTTGAC-ATCCTCAGAACTTGTAAGAAATTACTTGGTGCCTTCGGGAACTG-AGTGACAGGTGCTGCACGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGCAACGAGCGCAACCCCTATCCTTGGTTGCTAGCA-GGTAATGCTGAGAACTCCAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGATGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTTGCGAACT--CGCGAGAGCAAGCTAATCCCAGAAAGCCGATCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGAA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCAAAAGAAGTAGGTAGGCTAACCTTC------GGGAGGCCGCTT-ACCACTTTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCG-------------------------------- gill_endosymbiont_ex_Alviniconcha_hessleri ---------------------------------------------------------------AAGTCGAACGCGAAACACTC------------------------------------------------------------------------------------------------CTTCGG-------GAGTGGAGTAGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTGGT-AGTGGGGGATAGCCCGGAGAAATCCGGATTAATACCGCATACGCCTTAC-----------------GAGGGAAAGAGGGCC---TCTCC--------TTG------G--AAGCTCTCGCTATCA-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGGGGTAATGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGAGCGAAAGCTTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCGCGGGG-CTAATACCCCC-GTGT-CTTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGCCTGGTCAGTCAGATGTGAAAGCCCTGGGCTTAACCTGGGAACTGCATTTGATACTGCCAGGCT-AGAGTATGGTAGAGGGAAGTGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACACCAGTGGCGAAGG--CGGCTTCCTGGACCAATACTGACGCTGAGGTGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGCTCATT-------T-AAGGGCTTAGTGGCGCAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCCGGGAATCCTCCAGAGATGGAGGAGTGCCTTCGGGAACCC-GGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-AGTAATGTCGGGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTTGCCAACC--CGCGAGGGGGAGCCAATCCCAGAAAACCGATCGTAGTCCGGATTGCGGTCTGCAACTCGACCGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGAA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTGGCTAGTCTAACCGCT------TGCCGGAGGACC------GGTCCACCC----------------------------------------------------------------- gill_symbiont_of_Solemya_reidi ------------TTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGGTAACAGGC-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CTGCGCTGACGAGTGGCGGACGGGTGAGTAATGCATGGGAATCTGCCATAT-AGTGGGGGACAACCTGGGGAAACCCAGGCTAATACCGCATAATCTCTAC-----------------GGAGGAAAG-------------------------------G--CTTCGGCCGCTATTT-GATGAGCTCATGTCGGATTAGCTTGTTGGTGGGGTAATGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGAGGGGAGGATAA----------------------------TGACGTTACCCTCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGTTCAATAAGTTGGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTCAAAACT{AG}TTGGGCT-AGAGTTT{AG}GGAGAGGAGAGCGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACATCAGTGGCGAAGG--CGGCTCTCTGGCCTAAAACTGACGCTGAGGTGCGAAAGCGTGGGT-AGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGAAGCTT---------GACTTCTTAGTGGCGCAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGCTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCAGAACTTGTTAGAGATAACTTGGTGCCTTCGGGAACTG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCA-CATAATGGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTTGCCAACC--TGCGAAGGGGAGCTAATCTCAGAAAACCGGTCGTAGTC{CT}GGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGAA-TGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTGGGTA??CTAACCTTC------GGGAGGAC?C---------------------------------------------------------------------------------- thioautotrophic_gill_symbiont_ex_Bathymodiolus_azoricus --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGAAACGATA-----------------------AGAG----------------------------------------------------------------------CTTGCT-------CTTAGGCGTCGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTGAT-AGTGGGGGATAGCCCAGAGAAATCTGGATTAATACCGCATAATCTCTAT-----------------GGAGTAAAGTGGA-----GGACC--------TTC------G--GGCTTCACGCTATCA-GATGAGCCTGCGTAAGATTAGCTTGTTGGTGAGGTAAAAGCTCACC--AAGGCGACGATCTTTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATTGTGAAGAAAAGCTAATGG-TTAATACCCAT-TAGC-CTTGACGTTAACTTTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCATTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTTGTTAAGTCAGATGTGAAAGCCCTGGGCTCAACCTAGGAACTGCATTTGAAACTGGCAAACT-AGAGTATAGGAGAGGAAAGTGGAATT-TCAGGTGTAGCGGTGAAATGCGTAGAT?T?TGAAGGAACATCAATGGCGAAGG--CAGCTTTCTGGACTAATACTGAC?CTGAGGTACGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGACAACTAGCCGTTGGGAGGATT---------TACCTCTTAGTGGCGAAGCTAACGCGTTAAGTT-GTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATACACGGAACTTTCCAGAGATAGATTGGTGCCTTCGGGAACCG-TGATACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTATCTTTATTTGCCAGCA-CATCATGGTGGGAACTATAAAGAGACTGCCGGTGATAAACCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGGAAGGACAAAGGGTCGCAACCT--CGCGAGAGCAAGCTAATCTCATAAACCTTTTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGTGGATCAGAA-CGCCACGGTGAATACGTTCCCGGGTCTTG-TACACACCGCCCGTCATACCATGGGAGTGGGTTGCAAAAGAAGTGGGTAGCTTATCT-------------GGGCGCTC-ACCACTTTGTGATTCATGACTGGGGTAAAGTCGTAACAAGGTAACC--------------------------------- thiotrophic_bacterial_endosymbiont_ex_Bathymodiolus_heckerae --------AGAGTTTGA-TCCTGGCTCAGATTGAATCGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGAAACGATA-----------------------CTAG----------------------------------------------------------------------CTTGCT-------AGTAGACGTCGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTGAT-AGTGGGGGATAGCCCAGAGAAATCTGGATTAATACCGCATAATCTCTAT-----------------GGAGAAAAGGAGC-----CCTCTT------CTTG------A--AAGGTTTCGCTATCG-GATGAGCCTGCGTAAGATTAGCTTGTTGGTGAGGTAAAAGCTCACC--AAGGCGACGATCTTTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATTGTGAAGAAAAGCTAATGG-TTAATACCCAT-TAGC-CTTGACGTTAACTTTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTTGTTAAGTTAGATGTGAAAGCCCTGGGCTCAACCTAGGAACTGCATTTAAAACTGGTAAACT-AGAGTATAGGAGAGGAAAGTGGAATT-TCAGGTGTAGCGGTGAAATGCGTAGATATCTGAAGGAACATCAATGGCGAAGG--CAGCTTTCTGGACTAATACTGACACTGAGGTACGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGACAACTAGCCGTTGGGAGGATT---------TACCTCTTAGTGGCGAAGCTAACGCGTTAAGTT-GTCCGCCTGGGGAGTACGGCCGC-AAGGCTAAAACTCAAA-GGAATTGAC-GGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATACAGAGAACTTTCTAGAGATAGATTGGTGCCTTCGGGAACTC-TGATACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTATCCTTATTTGCCAGCA-CATCATGGTGGGAACTATAAGGAGACTGCCGGTGATAAACCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGGAAGGACAAAGGGTCGCAACCT--CGCGAGAGCAAGCTAATCTCATAAACCTTTTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCG-AGATCAGAA-TGCTACGGTGAATACGTTCCCGGGTCTTG-TACACACCGCCCGTCATACCATGGGAGTGGGTTGCACCAGAAGTGGCTAGTCTAACTGTTT----ACAGGGGACGGTC-ACCACGGTGTGATTCATGACTGGGGTACAGTCGTAACAAGGTA------------------------------------ thiotrophic_endosymbiont_of_Bathymodiolus_mauritanicus --------AGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGTATGCTTAAC-ACATGC-AAGTCGAACGGAAACGATA-----------------------AGAG----------------------------------------------------------------------CTTGCT-------CTTAGGCGTCGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTAGT-AGTGGGGGATAGCCCAGAGAAATCTGGATTAATACCGCATAATATCTAT-----------------GGATTAAAGTGGA-----GGATC--------TTC------G--GACTTCACGCTACTA-GATGAGCCTGCGTAGGATTAGCTTGTTGGTGAGGTAAAAGCTCACC--AAGGCGACGATCTTTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGCAACCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATTGTGAAGAAAAGCTAATGA-TTAATACCCAT-TAGC-CTTGACGTTAACTTTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT-GCGTAGGTGGTTTTTTAAGTCAGATGTGAAAGCCCTGGGCTCAACCTAGGAACTGCATTTGAAACTGGCAAACT-AGAGTATAGGAGAGGAAAGTGGAATT-TCAGGTGTAGCGGTGAAATGCGTAGATATCTGAAGGAACATCAATGGCGAAGG--CAGCTTTCTGGACTAATACTGACACTGAGGTACGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATAACTAGCCGTTGGGAGGATT---------TACCTCTTAGTGGCGAAGCTAACGCGTTAAGTT-ATCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGAC-ATACACGGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACCG-TGATACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTATCTTTATTTGCCAGCA-CATCATGGTGGGAACTATAAAGAGACTGCCGGTGATAAACCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGGAAGGACAAAGGGTTGCTAGGC--CGCGAGGTGGTGCTAATCTCATAAACCTTTTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGTGGATCAGAA-CGCCACGGTGAATACGTTCCCGGGTCTTG-TACACACCGCCCGTCATACCATGGGAGTGGGTTGCAAAAGAAGTGGGTAGCTTATCT-------------GGGCGCTC-ACCACTTTGTGATTCATGACTGGGGTAAAGTCGTAACAAGGTAAC---------------------------------- uncultivated_environmental_bacteria_AB694061.1.1406 -----------------------------------------------------------TGC--AGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCAGT-AGTGGGGGACAACCCGAGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCAGG-----GGATC--------TTC------G--GACCTTGCGCTATTG-GATGAGCCCGCGTCGGATTAGCTTGTTGGTAGGGTAACGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCCTAGGGTTGTAAAGCACTTTCAGTTGGGAAGAAACGCAGAGCG-TTAATACCGCT-CTGT-AATGACGTTACCAACACAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGCGGCTCTGTAAGTCGGGTGTGAAAGCCCCGGGCTCAACCCGGGAACTGCATTCGATACTGCAGGGCT-AGAGTATGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCTTTCTGGACCAATACTGACGCTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------T-AAACCCTTTGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAAAGGGTCGCCAACC--CGCGAGGGGGAGCCAATCCCACAAAACCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGAA-TGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTAGGTTGCTTAACCTTC------GGGAGAGCGCT--------------------------------------------------------------------------------- uncultivated_environmental_bacteria_DQ513032.1.1504 --------AGGGTTTGA-TCCTGGCTCAGGTTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCAGT-AGTGGGGGACAACCCGAGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCAGG-----GGATC--------TTC------G--GACCTTGCGCTATTG-GATGAGCCCGCGTCGGATTAGCTTGTTGGTGGGGTAACGGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCGGCAATGCCGCGTGTGTGAAGAAGGCCTTAGGGTTGTAAAGCACTTTCAGTTGGGAAGAAACGCAGGGTG-CTAATACCACC-CTGT-AATGACGTTACCAACACAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTCTGATAAGTCGGGTGTGAAAGCCCCGGGCTTAACTTGGGAATTGCATTCGATACTGTCAGACT-AGAGTGTGGTAGAGGGAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCTTCCTGGACCAACACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCATAGGGGGTATT-------TGAAACCTTTTGTGGCGAAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGAATCCCGCAGAGATGCGGGAGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTCATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTTGCCAACC--TGCAAAGGGGAGCTAATCCCTCAAAACCGGTCGTAGTCCGGATCGAAGTCTGCAACTCGACTTCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGAA-CGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTAGGTAGCTTAACCTTC------GGGAGGGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCG-------------------------------- uncultivated_environmental_bacteria_EU652572.1.1506 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAATACGTAGGAATCTGCCCAGT-AGTGGGGGACAACCCGGGGAAACCCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCACGCTATTG-GATGAGCCTACGTCCGATTAGCTTGTTGGTGAGGTAAAAGCTCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCCTAGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCAGGGTG-TTAATACCACC-CTGT-GCTGACGTAACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTCTGATAAGTCGGATGTGAAAGCCCCGGGCTTAACTTGGGAATTGCATTCGATACTGTCAGGCT-GGAGTGTGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTTCTGGACCAACACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------TGAAACCCTTTGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGAATCCCGCAGAGATGCGGGAGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTGGAA{AG}ATGTTGGG{CT}TAAGTCGCCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGGCGGTACAAAGGGTCGCCAAAG--CGCGAGCTGGAGCTAATCCCAAAAAACCGTCCTCAGTTCGGATTGCAGTCTGCAACTCGACTGCATGAAGTTGGAATCGCTAGTAATCCCGGATCAGCA-TGCCGGGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACATCACGAAAGTCGGCTGTACCGGAAGCCGGTGGGCTAACCCTC------GGGAGGCAACTG-TCCATGGTATGGTCGGCGATTGGGGTGAAGTCGTAACAAGGTAACC--------------------------------- uncultivated_environmental_bacteria_FJ905747.1.1417 -----------------------------------------------------------TGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAATACGTAGGAATCTACCCAGT-AGTGGGGGACAACTCGAGGAAACTCGAGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGACC--------TTC------G--GGCCTCGCGCTATTG-GATGAGCCTACGTCTGATTAGCTTGTTGGTGGGGTAATGGCCTACC--AAGGCGACGATCAGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTAGGGAAGAAACACCGGGTG-CCAATACCACC-CGGG-AATGACGTTACCTACAGAAGAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGTGGCTTGGTAAGTCGGATGTGAAAGCCCCGGGCTCAACCTGGGAATGCCATTCGATACTGCCAGGCT-GGAGTATGGTAGAGGGAAGCGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACACCAGTGGCGAAGG--CGGCTTCCTGGACCAATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------G-AAACCTTTAGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCCTACCTGCCTTTGAC-ATCCTTGGAATCTCCCGGAAACGGGAGAGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGTTGCCAACC--CGCGAGGGGGAGCTAATCCCACAAAGCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCA-CGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGTACCAGAAGTAGGTAGTCTAACCTTC------GGGGGGGCGCTT-ACCACGGTA---------------------------------------------------------------------- uncultivated_environmental_bacteria_FN553505.1.1500 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCAGT-AGCGGGGGACAACCCGAGGAAACTCGGGCTAATACCGCATACGCCCTGC-----------------GGGGGAAAGCAGG-----GGATC--------TTC------G--GACCTTGCACTATTG-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGAGGTAACGGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCCTAGGGTTGTAAAGCACTTTCAGTTGGGAAGAAACGCAGAGTG-TTAATACCACT-CTGT-AATGACGTTACCAACACAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGCTGTGTAAGTCGGGTGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTCGATACTGCAGGGCT-AGAGTATGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCTTTCTGGACCAATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------T-AAACCCTTCGTGGCGAAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACCTTCCAGAGATGGTTGGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAAAGGGCTGCCAACC--CGCAAGGGGGAGCCAATCCCAGAAAACCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGAA-TGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTAGGTTGCTTAACCTTC------GGGAGAGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAA----------------------------------- uncultivated_environmental_bacteria_HE817831.1.1534 --------AGAGTTTGA-TTCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGT-GCGGACGGGTGAGTAACGCGTGGGAATCTGCCCGGT-AGTGGGGGACAACCCGAGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCTATTG-GATGAGCCCGCGTCGGATTAGCTTGTTGGTGGGGTAATGGCTCACC--AAGGCAACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCAGGGGG-CCAATACCCCT-CTGT-GCTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCAGAATTACTGGGCGTAAAGGGC-GAGTAGGTGGTACGGTCAGTCGGGTGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTCGATACTGCCGAGCT-GGAGTGTGGTAGAGGGAAGCGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACACCAGTGGCGAAGG--CGGCTTCCTGGACCAACACTGACACTGAGTCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------AGAAACCTTTAGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATGCTCGGAACTTGGCAGAGATGCCTTGGTGCCCTCGGGAACCG-AGACACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGGGCAGGGCTACACACGTACTACAATGGCCGGTACAGAGGGTCGCCAACC--CGCGAGGGGGAGCCAATCCCACAAAACCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGGA-CGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCAAAAGAAGTAGGTAGCTTAACCTTC------GGGAGGGCGCTT-ACCACTTTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTT- uncultivated_environmental_bacteria_JF272102.1.1499 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACAGC------------------------AGAG----------------------------------------------------------------------CTTGCT--------CTGGCTGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCCTTT-GGTGGGGGACAACTGGAGGAAACTCCAGCTAATACCGCATAAGCCTTAC-----------------GAGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCCGATG-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGGGGTAATGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCCTAGGGTTGTAAAGCACTTTCAGTAGAGAAGAAAAGCTTAGGG-TTAATACCCTT-GAGT-CTTGACGTAACCTACAGAAGAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGCGGCCTGATAAGTCGGATGTGAAAGCCCTGGGCTTAACCTGGGAATTGCATTCGATACTGTCAAGCT-AGAGTACGGTAGAGGAAAGCGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACATCAGTGGCGAAGG--CGGCTTTCTGGACTGATACTGACGCTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGAGCATC-------T-AAGCTCTTAGTGGCGCAGCTAACGCGTTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATTGACAGAACCCTGGAGAGATCCGGGGGTGCCTTCGGG-CCTG-GAAAACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTATCCTTAGTTGCCAGCG-GTTAG-GCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGGCAGGGCTACACACGTGCTACAATGGACGGTACAGACGGTCGCGAACC--CGCGAGGGGAAGCTAATCTGATAAAGCCGTTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGAA-CGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCAAAAGAAGTAGGTAGCTTAACCTTC------GGGAGGGCGCTT-ACCACTTTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCC--------------------------------- uncultivated_environmental_bacteria_JF344142.1.1499 --------AGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAACGCGCAGGAATCTACCCAGT-AGTGGGGGACAACCCGAGGAAACTCGGGCTAATACCGCATAAGCCCTAC-----------------GGGGGAAAGCGGG-----GGACC--------TTC------G--GGCCTCGCGCTATTG-GATGAGCCTACGTCGGATTAGCTTGTTGGTGGGGTAAAGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCGCGTGGGTGAAGAAGGCTTTCGGGTTGTAAAGCCCTTTCAGTGGGGAAGAAAAGCGGAGTG-ATAATACCACT-CTGT-CATGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGCAAAGGGC-GCGTAGGTGGCCTGATAAGTCGGATGTGAAAGCCCCGAGCTTAACTTGGGAATTGCATTCGATACTGTCAGGCT-AGAGTATGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCTTTCTGGACCAATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------T-AAATCTCTAGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCTTTGAC-ATCCTCGGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGTAGGTACAAAGGGTTGCTAACC--CGCGAGGGGGAGCCAATCCCATAAAACCTGCCGTAGTTCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCA-CGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTAGGTTGCTTAACCTTC------GGGAGGGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTA------------------------------------ uncultivated_environmental_bacteria_JF344692.1.1512 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGTACGCTTAAC-ACATGC-AAGTCGAACGGTAACGGGA-----------------------GAGA----------------------------------------------------------------------TTTATC-------TCTTGCCGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTAGC-AGTGGGGGACAACTTGGGGAAACTCGAGCTAATACCGCATATATTTCTTTATCTT-----GAAGGTAGAGAAGGAAAGG-----GGGGT--------CTT------T--GGCCTCTCGCTGTTA-GATGAGCCTGCGTCGGATTAGCTTGTTGGTGGGGTAACGGCCTACC--AAGGCTACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGACGCAAGCCTGATCCAGCAATACCGCGTGTGTGAATAAGGCCTTCGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAGGTCCGAGG-TTAATACCCTCTGGGC-TTTGACGTTACCCAAAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGCTTGGTAAGTCGGGTGTGAAAGCCCTGGGCTTAACCTGGGAATGGCATTCGATACTGCTAAGCT-AGAGTACGGTAGAGGGAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTCCTGGACTGATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGCAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGAGCGTT-------A-GAGCTCTTAGTGGCGAAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTTGGAACCCCACGGAGACGTGGGGGTGCCTTCGGGAGCCA-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGCG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCCTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCTTTATAAGCAGGGCTACACACGTGCTACAATGGCCGGTACAGAGAGTCGCGAGCC--TGTGAGGGTGAGCTAATCCCGAAAAGCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGAA-CGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGGTTGCTTAACTTTC------GAGAGGGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTA------------------------------------ uncultivated_environmental_bacteria_JF809744.1.1399 --------AGAGTTTGA-TCATGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCAGT-AGTGGGGGACAACCCGAGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCAGG-----GGATC--------TTC------G--GACCTTGCGCTATTG-GATGAGCCCGCGTCGGATTAGCTTGTTGGTGAGGTAACAGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCCTAGGGTTGTAAAGCACTTTCAGTCGGGAAGAAACGCAGGGTG-TTAATACCACC-CTGT-AATGACGTTACCGACACAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTTTTGTAAGTCGGGTGTGAAAGCCCCGGGCTTAACCCGGGAATTGCATTCGATACTGCAGGGCT-AGAGTATGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCTTTCTGGACCAATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------T-AAACCCTTCGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCTTTGAC-ATCCTCGGAACCTTCCAGAGATGGTTGGGTGCCTTCGGGAACCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAAAGGGTTGCCAACC--CGCAAGGGGGAGCCAATCCCACAAAACCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGCA-TGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTC----------------------------------------------------------------------------------------------------------------------------------------------- uncultivated_environmental_bacteria_JN977228.1.1533 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAACGCGTGGGAATCTGCCCAGT-AGTGGGGGACAACCCGAGGAAACTCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCAGG-----GGATC--------TTC------G--GACCTTGCGCTACTG-GATGAGCCCGCGTCGGATTAGCTTGTTGGTGGGGTAACGGCTCACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCCTAGGGTTGTAAAGCACTTTCAGTTGGGAAGAAACGCAGAGGG-TTAATACCCCT-CTGT-AATGACGTTACCGACACAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGCTCTGTAAGTCGGGTGTGAAAGCCCCGGGCTCAACCCGGGAATTGCATTCGATACTGCAGGGCT-AGAGTATGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCTTTCTGGACCAATACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------T-AAACCCTTCGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-ATTCG-GTCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAAAGGGTTGCCAACC--CGCGAGGGGGAGCTAATCCCATAAAACCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGCA-TGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTAGGTTGCTTAACCTTC------GGGAGAGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTT-- uncultivated_environmental_bacteria_JQ347371.1.1498 ---------GAGTTTGA-TTCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACAGCG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCGGCTGACGAGTGGCGGACGGGTGCGTAACGCGTGGGAATCTGCCTAGT-AGTGGGGGATAACTCCGGGAAACCGGGGCTAATACCGCATACACCCTAC-----------------GGGGAAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCTATTA-GATGAGCCCGCGTCCGATTAGCTTGTTGGTGGGGTAAAGGCTCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTTAGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCTAGGGG-TTAATACCTCC-TTGT-GCTGACGTTACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGCTAGATTAGTCGGGTGTGAAAGCCCCGGGCTTAACTCGGGAATTGCATTCGATACTGTCTGGCT-AGAGTGCAGTAGAGGGAAGCGGAATT-CCGGGTGTAGCGGTGAAATGCGTAGATATCCGGAGGAACACCAGTGGCGAAGG--CGGCTTCCTGGACTGACACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTGTT-------AGAAACCTTTAGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATTGACGGAACCCGCTAGAGATAGCGGGGTGCCTTCGGG-CCTG-GAAAACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCA-CTCCG-GGTGGGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTAGCCAACC--AGCAATGGGGAGCCAATCCCAGAAAACCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGAA-TGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCAAAAGAAGTAGGTAGCTTAACCTTC------GGGAGAGCGCTT-ACCACTTTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTA------------------------------------ uncultivated_environmental_bacteria_JQ800923.1.1507 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAATACGTAGGAATCTGCCCAGT-AGTGGGGGACAACCCGGGGAAACCCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATCT-------TTT------A--GACCTCGCGCTATTG-GATGAGCCTACGTCCGATTAGCTTGTTGGTGAGGTAAAAGCTCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCCTAGGGTTGTAAAGCACTTTCAGTGGGGAAGAAAAGCAGGGTG-TTAATACCACC-CTGT-GCTGACGTAACCCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTTTGATAAGTCGGATGTGAAAGCCCCGGGCTTAACTTGGGAATTGCATTCGATACTGTCAGGCT-AGAGTGTGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTTCTGGACCAACACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------TGAAACCCTTTGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGAATCCCGCAGAGATGCGGGAGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGTCGGTACAAAGGGTTGCCAAGC--AGCAATGCGGAGCTAATCCCATAAAACCGGTCGTAGTCCGGATCGAAGTCTGCAACTCGACTTCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGAA-CGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACATCACGAAAGTGGATTGTACTAGAAATCCGTGGCCTAACCTTC------GGGGGGGAGCGG-CTGAAGGTATGATCCATGATTGGGGTGAAGTCGTAACAAGGTAACCGTA------------------------------ uncultivated_environmental_bacteria_JQ800972 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAATACGTAGGAATCTGCCCAGT-AGTGGGGGACAACCCGGGGAAACCCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCTATTG-GATGAGCCTACGTCCGATTAGCTTGTTGGTGAGGTAAAGGCTCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCCTAGGGTTGTAAAGCACTTTCAGTGAGGAAGAAAAGCAGGGGG-TTAATACCTCC-CTGT-GCTGACGTTACTCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTCTGATAAGTCGGGTGTGAAAGCCCCGGGCTTAACTTGGGAATTGCATTCGATACTGTCAGGCT-GGAGTGTGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACATCAGTGGCGAAGG--CGGCTTTCTGGACCAACACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------TTAAACCCTTTGTGGCGAAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGAATCCCGCAGAGATGCGGGAGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGTCGGTACAAAGGGTTGCCAAGC--AGCAATGCGGAGCTAATCCCATAAAACCGATCGTAGTCCGGATCGAAGTCTGCAACTCGACTTCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGAA-CGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTAGGTGGCTTAACCTTC------GGGAGAGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTA------------------------------ uncultivated_environmental_bacteria_JX504483.1.1538 --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGCAGCGCGG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCTGGCGGCGAGTGGCGGACGGGTGAGTAATACGTAGGAATCTGCCCAGT-AGTGGGGGACAACCCGGGGAAACCCGGGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATCT-------TTT------A--GACCTCGCGCTATTG-GATGAGCCTACGTCCGATTAGCTTGTTGGTGAGGTAAAGGCTCACC--AAGGCGACGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCCTAGGGTTGTAAAGCACTTTCAGTAGGGAAGAAAAGCAGGGTG-TTAATACCACC-CTGT-GCTGACGTTACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGC-GCGTAGGTGGTCTGATAAGTCGGATGTGAAAGCCCCGGGCTTAACTTGGGAATTGCATTCGATACTGTCGGGCT-GGAGTGTGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGACGAAAGGCGGCTTTTCTGGACCAACACTGACACTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------TGAAACCCTTTGTGGCGCAGCTAACGCGATAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCTTTTGAC-ATCCTCGGAATCCCGCAGAGATGCGGGAGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGTCGGTACAAAGGGTTGCCAAGC--AGTAATGCGGAGCTAATCCCACAAAACCGGTCGTAGTCCGGATCGAGGTCTGCAACTCGACTTCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGAA-CGCCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTGAGTGGCTTAACCTTC------GGGAGAGCGCTT-ACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTA- uncultivated_environmental_bacteria_KC009908.1.1512 TAGAGTTTAGAGTTTGA-TCTTGGCTCAGATTGAA-CGCTGGCGGCATGCCTAAC-ACATGC-AAGTCGAACGGGAACG-AG-----------------------GGAG----------------------------------------------------------------------CTTGCT-------CCCAGGCGTCGAGTGGCGGACGGGTGAGTAATACTTAGGAATCTGCCCATT-AGTGGGGGACAACTAGAAGAAATTCTAGCTAATACCGCATACGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCTAATG-GATGAGCCTAAGTCGGATTAGCTTGTTGGTGAGGTAACGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGATCAGCCACACCGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTAGAGAAGAAAAGCCTACGG-TTAATACCCGT-GAGT-CTTGACGTAACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGCGGCTTTGTAAGTCGGATGTGAAAGCCCCGGGCTTAACCTGGGAATTGCATTCGATACTGCAGGGCT-AGAGTATGGTAGAGGAAAGCGGAATT-CCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG--CGGCTTTCTGGACCAATACTGACGCTGAGGCGCGAAAGCGTGGGG-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGAACTAGCCGTTGGGGGTATT-------T-AAACCCTTCGTGGCGCAGCTAACGCGTTAAGTT-CTCCGCCTGGGGAGTACGGCCGC-AAGGTTAAAACTCAAA-GGAATTGAC-GGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGCCCTTGAC-ATCCTCGGAACCTTCCAGAGATGGTTGGGTGCCTTCGGGAACCG-AGAGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCG-GTTCG-GCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCAGGGCTACACACGTGCTACAATGGCCGGTACAAAGGGCTGCCAACC--CGCGAGGGGGAGCCAATCCCACAAAACCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGCA-CGCTGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGCTGCAAAAGAAGTAGGTAGCTTAACCTTC------GGGAGGGCGCTT-ACCACTTTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTACCCGTA------------------------------ uncultured_gill_symbiont_ex_Codakia_orbicularis --------AGAGTTTGA-TCCTGGCTCAGATTGAA-CGCTGGCGGCATGCTTAAC-ACATGC-AAGTCGAACGGTAACAGCG-----------------------GAAG----------------------------------------------------------------------CTTGCT-------TCCGGCTGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTAGT-AGTGGGGGACAACCCGGGGAAACTCGGGCTAATACCGCATAAGCCCTAC-----------------GGGGGAAAGCGGG-----GGATC--------TTC------G--GACCTCGCGCTATTA-GATGAGCCTGCGTCGGATTAGCTTGTTGGTAGGGTAATGGCCTACC--AAGGCGACGATCCGTAGCTGGTCTGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGG-AGGCAGCAGTG--GGGAA-TATTGCACAATGGGCGCAAGCCTGATGCAGCAATGCCGCGTGTGTGAAGAAGGCCTGCGGGTTGTAAAGCACTTTCAATTGGGAGGAAAAGTTCAGAG-TTAATAGCTCT-GGAC-CTTGACGTTACCTTTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGTGTTAATCGGAATTACTGGGCGTAAAGCGC-GCGTAGGTGGTTTGGTAAGTCAGATGTGAAAGCCCCGGGCTCAACCTGGGAACTGCATCTGATACTGCCTGACT-AGAGTATGGTAGAGGGAAGTGGAATT-CCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACATCAGTGGCGAAGG--CGACTTTCTGGACCAATACTGACACTGAGGCGCGAAAGCGTGGGT-AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGCTCATTA------T-AAGGGCTTAGTGGCGAAGCTAACGCGATAAGTT-GACCGCCTGGGGAGTACGGCCGC-AAGGCTAAAACTCAAA-GGAATTGAC-GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGCCCTTGAC-ATCCTCGGAACTTACTAGAGATAGTTTGGTGCCTTCGGGAACCG-AGTGACAGGTGCTGCATGGC-TGT-CGTCAGCTCGTGTCGTG--AGATGTTGGGTTAAGTC-CCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCA-CTTCG-GGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCTGCCAACC--CGCGAGGGGGAGCTAATCTCAGAAAACCGGTCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCA-TGTCGCGGTGAATACGTTCCCGGGCCTTG-TACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTGGGTAGCTTAACCTTC------GGGAGGGCGCTC-ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTA------------------------------------ ; END; [ The following blocks are output data for analysis step 19011 ] BEGIN TREES; TITLE Symbiont_of_Kentrophoros_16S_rRNA; LINK TAXA = TaxaForAnalysisStep19011; TREE MrBayes = [&R] (((((((((Halorhodospira_neutriphila:0.04564086,Halorhodospira_halophila_SL1:0.01323163)1.000:0.0689931,(Nitrococcus_mobilis:0.07434235,Arhodomonas_aquaeolei:0.04901755)1.000:0.03877188)0.526:0.01144172,(Alkalispirillum_mobile:0.004356114,'Alkalilimnicola ehrlichii MLHE-1':0.01937949)1.000:0.01423205)0.911:0.01429433,Aquisalimonas_asiatica:0.05532119)1.000:0.03701836,Natronocella_acetinitrilica:0.04469576)1.000:0.03349773,((Thioalkalivibrio_denitrificans:0.02840664,Thioalkalivibrio_jannaschii:0.09059325)0.993:0.01501725,(Thiorhodospira_sibirica_ATCC_700588:0.02621057,(Ectothiorhodosinus_mongolicus:0.04171037,Ectothiorhodospira_shaposhnikovii:0.02544918)1.000:0.0421695)1.000:0.02903128)1.000:0.02120987)0.998:0.02048175,(((Aquicella_lusitana:0.2708123,Diplorickettsia_massiliensis:0.1907234)1.000:0.1045369,Coxiella_burnetii:0.06378082)1.000:0.06914919,(((((Thiotrophic_ectosymbiont_of_Kentrophoros_sp._H_SA2B15:0.04616102,(Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FM_BZ176:0.001776608,Thiotrophic_ectosymbiont_of_Kentrophoros_sp._G_BZ185:0.001744785)1.000:0.01700207)0.705:0.0105652,Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FB_S136:0.03057523)0.864:0.01068456,(((Thiotrophic_ectosymbiont_of_Kentrophoros_sp._LFY_BY7:0.03461393,Thiotrophic_ectosymbiont_of_Kentrophoros_sp._SD_S127:0.0275836)0.999:0.01635406,((Thiotrophic_ectosymbiont_of_Kentrophoros_sp._UNK_BY8:0.005467884,('Thiotrophic ectosymbiont of Kentrophoros sp. LPFa_S313':6.44162E-4,uncultivated_environmental_bacteria_JF344692.1.1512:0.008185223)0.618:0.001493619)1.000:0.01896407,Thiotrophic_ectosymbiont_of_Kentrophoros_sp._TC_BZ126:0.02269256)0.990:0.01485159)0.986:0.01834516,Thiotrophic_ectosymbiont_of_Kentrophoros_sp._TUN_BY2:0.04733967,Thiotrophic_ectosymbiont_of_Kentrophoros_sp._BT_S243:0.03231107,(Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FW_BZ131:0.01257731,Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FW_BZ106:0.006646401)1.000:0.03651182)1.000:0.03352347)1.000:0.04731789,Thiotrophic_ectosymbiont_of_Kentrophoros_sp._FBG_S435:0.06136322)0.811:0.01223809,(((((uncultivated_environmental_bacteria_JX504483.1.1538:0.01590993,((uncultivated_environmental_bacteria_JQ800923.1.1507:0.01539185,uncultivated_environmental_bacteria_EU652572.1.1506:0.0403798)1.000:0.01774648,uncultivated_environmental_bacteria_JQ800972:0.009111436)0.619:0.003222554)1.000:0.02623669,uncultivated_environmental_bacteria_DQ513032.1.1504:0.02211527)1.000:0.02742031,(((uncultivated_environmental_bacteria_JN977228.1.1533:0.006737295,uncultivated_environmental_bacteria_AB694061.1.1406:0.01138981)1.000:0.01311016,uncultivated_environmental_bacteria_FN553505.1.1500:0.0111857)0.795:0.005286006,uncultivated_environmental_bacteria_JF809744.1.1399:0.007968398)1.000:0.01856827)0.981:0.01536392,(uncultivated_environmental_bacteria_JF344142.1.1499:0.03933188,uncultivated_environmental_bacteria_FJ905747.1.1417:0.05044479)0.811:0.004805306)0.965:0.01192122,((uncultivated_environmental_bacteria_HE817831.1.1534:0.03291058,uncultivated_environmental_bacteria_JQ347371.1.1498:0.07622731)0.995:0.02651027,(uncultivated_environmental_bacteria_KC009908.1.1512:0.03485116,uncultivated_environmental_bacteria_JF272102.1.1499:0.0855498)0.995:0.01959415)0.867:0.007550964)0.837:0.01077069)0.991:0.02110735)0.915:0.01171763)0.897:0.01037791,((Thioalkalispira_microaerophila:0.06818286,Thiohalophilus_thiocyanatoxydans:0.06808588)0.945:0.01295747,gill_symbiont_of_Solemya_reidi:0.08693292)1.000:0.02856185,((((((Thiothrix_flexilis:0.2064588,(gamma_proteobacterium_ectosymbiont_ex_Rimicaris_exoculata:0.0919402,Leucothrix_mucor:0.1113278)1.000:0.03286229)1.000:0.03275299,(Gamma_3_endosymbiont_ex_Olavius_algarvensis:0.06963738,((thiotrophic_bacterial_endosymbiont_ex_Bathymodiolus_heckerae:0.01052623,Candidatus_Ruthia_magnifica_str._Cm_ex_Calyptogena_magnifica:0.07642037)1.000:0.03571695,(thioautotrophic_gill_symbiont_ex_Bathymodiolus_azoricus:0.002792398,thiotrophic_endosymbiont_of_Bathymodiolus_mauritanicus:0.02431039)0.964:0.01058896)1.000:0.1374675)0.924:0.02209022)0.998:0.02848157,Sedimenticola_selenatireducens:0.08218283)0.523:0.01374811,((endosymbiont_of_Lamellibrachia_columna:0.01432526,endosymbiont_ex_Escarpia_spicata:0.04186847)1.000:0.03372089,Candidatus_Endorifita_persephone_ex_Riftia_pachyptila:0.05215177)0.999:0.0106847)1.000:0.01988871,uncultured_gill_symbiont_ex_Codakia_orbicularis:0.03518359)1.000:0.02373673,((Sulfurivirga_caldicuralii:0.1544254,Thioprofundum_hispidum:0.04183362)0.975:0.01816286,((gill_endosymbiont_ex_Alviniconcha_hessleri:0.05262931,endosymbiont_ex_Ifremeria_nautilei:0.04421339)1.000:0.03187653,(Candidatus_Thiobios_zoothamnicoli_ex_Zoothamnium_niveum:0.1135792,((Gamma1_endosymbiont_ex_Olavius_algarvensis:0.0251115,Gamma1_endosymbiont_ex_Olavius_crassitunicatus:0.04969895)1.000:0.03316213,(Halochromatium_glycolicum:0.01863649,((Thiohalocapsa_halophila:0.009105931,Lamprocystis_purpurea:0.02783005)1.000:0.01017101,(((((Thiocapsa_roseopersicina:0.05123649,Thiodictyon_bacillosum:0.02615409)0.943:0.01220539,(((Thiocystis_violascens_DSM198:0.02721809,Chromatium_okenii:0.04642191)1.000:0.02174656,Allochromatium_vinosum_DSM_180:0.04666485)1.000:0.02301855,(Thiophaeococcus_mangrovi:0.04938061,Thiorhodococcus_minor:0.02606709)1.000:0.02423974)0.699:0.01198985)0.645:0.009608117,Lamprocystis_roseopersicina:0.0508965)1.000:0.0201495,Thiococcus_pfennigii:0.04152723)0.996:0.01533092,(Thiorhodovibrio_winogradskyi:0.01212358,Rhabdochromatium_marinum:0.04493489):0.02385683)1.000:0.007383209)0.972:0.01039812)0.997:0.03005187)1.000:0.03697858)1.000:0.0219878)0.993:0.02348238)1.000:0.01571734)1.000:0.0184615)1.000:0.029904474,(((((((((Lysobacter_koreensis:0.06086118,Luteimonas_aestuarii:0.01392574)0.992:0.02675546,(Xanthomonas_theicola:0.02463457,(Xanthomonas_perforans:0.005784214,Stenotrophomonas_maltophilia:0.06523169)0.898:0.009674904)0.735:0.003127227)0.885:0.01106371,Pseudoxanthomonas_spadix:0.04329589)0.988:0.01106293,Xylella_fastidiosa:0.04229642)1.000:0.04898757,Arenimonas_malthae:0.087274)1.000:0.1106908,Beggiatoa_alba_B18LD:0.1381149)1.000:0.05775567,((Cardiobacterium_hominis_ATCC_15826:0.0478622,(Suttonella_ornithocola:0.04926981,Dichelobacter_nodosus_VCS1703A:0.1053894)1.000:0.03141923)1.000:0.1041271,(Halothiobacillus_kellyi:0.04983525,(Thioalkalibacter_halophilus:0.07730727,Halothiobacillus_neapolitanus:0.08199724)0.966:0.02416033)1.000:0.0706821)0.685:0.01475335)0.980:0.02131177,((Tatlockia_maceachernii:0.07029701,(Fluoribacter_dumoffii:0.01120486,Legionella_wadsworthii:0.02620637)0.998:0.02244515)1.000:0.1250653,((Caedibacter_taeniospiralis:0.2159448,Francisella_philomiragia:0.1092319)1.000:0.1394179,Piscirickettsia_salmonis:0.1454416)1.000:0.04168376)0.983:0.03394569)0.966:0.02793878,(((Nitrosococcus_halophilus:0.0241943,Nitrosococcus_oceani:0.04021499)1.000:0.09179888,Methylocaldum_szegediense:0.08331765)0.917:0.02767536,(((((Methylomonas_methanica:0.02221147,Methylomonas_aurantiaca:0.05604826)1.000:0.02344897,(Methylobacter_whittenburyi:0.02241676,Methylomicrobium_agile:0.02259643)1.000:0.02852899)1.000:0.04485365,Methylosphaera_hansonii:0.05136916)0.998:0.02633211,(Rheinheimera_chironomi:0.2302981,Methylophaga_thalassica:0.1076711)1.000:0.05954281)1.000:0.03860001,Methylococcus_capsulatus:0.06595882)0.983:0.02509828)0.875:0.01558584)0.986:0.011529435); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr98152] END;