#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on November 10, 2026; 4:43 GMT TreeBASE (cc) 1994-2008 Study reference: Barnes G.K., Kristiansen P.A., Beyene D., Workalemahu B., Fissiha P., Merdekios B., Bohlin J., Preziosi M., Aseffa A., & Caugant D.A. 2016. Prevalence and epidemiology of meningococcal carriage in Southern Ethiopia prior to implementation of MenAfriVac, a conjugate vaccine. BMC Infectious Diseases, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S19944] [ The following blocks are input data for analysis step 19324 ] BEGIN TAXA; TITLE TaxaForAnalysisStep19324; DIMENSIONS NTAX=32; TAXLABELS Neisseria_meningitidis_10450 Neisseria_meningitidis_1053 Neisseria_meningitidis_11 Neisseria_meningitidis_11372 Neisseria_meningitidis_11587 Neisseria_meningitidis_11591 Neisseria_meningitidis_11592 Neisseria_meningitidis_11593 Neisseria_meningitidis_11594 Neisseria_meningitidis_11595 Neisseria_meningitidis_11597 Neisseria_meningitidis_11598 Neisseria_meningitidis_11617 Neisseria_meningitidis_11624 Neisseria_meningitidis_11638 Neisseria_meningitidis_11642 Neisseria_meningitidis_11741 Neisseria_meningitidis_175 Neisseria_meningitidis_178 Neisseria_meningitidis_181 Neisseria_meningitidis_192 Neisseria_meningitidis_198 Neisseria_meningitidis_207 Neisseria_meningitidis_2075 Neisseria_meningitidis_2724 Neisseria_meningitidis_2880 Neisseria_meningitidis_35 Neisseria_meningitidis_53 Neisseria_meningitidis_7389 Neisseria_meningitidis_767 Neisseria_meningitidis_7849 Neisseria_meningitidis_8447 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M39134] TITLE MLST_Ethiopian_Carriage_Study; LINK TAXA = TaxaForAnalysisStep19324; DIMENSIONS NCHAR=425; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Neisseria_meningitidis_10450 CGCGTTTATCACGAATGGGAGTGGCGGACGTAACGGCGTCTTCCCTGTACCGTCTCTCATTGCCTCGTCTCTTATATACTCCCATCCGCCTCCTCAGAACTGCAACCACCTAACTTGCCACGCTTTACTTGGTGTTAAAAACCGTTGTTTCCATCGT-GGGCATTCGATGCGGAGGAACTTAACTTGGCGCCGCAATTACGCGACGCGGAAAAACGGTCGGTCGCAAACACCGCATGTGGGCGATCGCATTGTCAGTGTGTCCCCCGGCCTCACACCCATTGTCCGTGCACCGCCACCATACGATTGTCGTCCTGTTGGAGGCGTATGGGTACATCATTTTCGTTCCCCCTGAAGCGTTTCCGGGGAGTCGGCGCCCGATTGTTAAGCAATCGCAGTGGTCTCACGCCCTGACCACCGTCCCGAC Neisseria_meningitidis_1053 CGCGCCCGCCGCGAACGGGAGTGATGGGCACAGGGCCGCCCTCCTTGGACCATTCCCCGTTACCTCCTCTTCTATATACTCCCATCCGCCTCCTTGCGACTGCAACCACCTAACTTGCCACGCTTTACTTGGTGTTAAAAACCGTTGTTTCCATCGT-GGGCATTCGATGCGGAGGAACTTAACTTGGCGCCGCAATTACGCGACGCGGAAAAACGGTCGGTCGCAAACACCGCATGTGGGCGATCGCATTGTCAGTATGTCTCCCGAGTTCACGCCCGCTAGCTGTGCACCGTCACCATACGACTGTCGCCCTGTTGAGGACGTATGGGTACATCATTTTCGTTCCCCCTGCGCGGTCCACGTGGGGTTAAACATCCATTGGTAGCTGGTCTCAGCGGTCTCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_11 CGTGCCCGCCGCGAACGGGGGTGGCGGACATAGCGGCGCCTTTCCTGGGCCATCTCTCATTGCCTCGTCTCCCATATACCCTCATCCGCCTCCTTGCGACTACAACCACCCAATTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGAGGAACTTAGCTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTCGTCAGTGTGTCCCCCGGCCTCAGGCGTATCAGCTGTGCGCCGCTGCCGCGCAACCATCGTTTCCCCCAGGATGTGTGGGTACATCATTTTCGTTCCCCCTGAAGGGCTTCTAGCGGGTTAAAAGTTCACGACGAGCTGGTCGCAGTGGTCTCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_11372 CGTACCCGCCGTGAACGGGGGTGGCGGACATAGCGCCGCTTTTCCTGGGCCATTCTCCGTCGCTTTGTTCCCCATATACCCTCATCCGCCTCCTTGCGACTGCAACCACCCAACTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGATAAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACGGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATACCTCCCGAGCTCAGGCCCGCTAGTTACCTGTCGCTGTCGCGCAACTGTCGCTTCGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTCCGCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTAACGCCCTAGCCACCGTCCCGAT Neisseria_meningitidis_11587 CGCGCTTATCACTGCCAAAGACCGTAAACACAGCGCCGCCTTTCCTGGGCCATTCTCCGTCGTCTCGTCTCCCATATACCCTCATCCGCCTCCTTGCGACTGCAACCACCTAACTTGCCACGCTTTACTTGGTGTTAAAAACCGTTGTTTCCATCGT-GGGCATTCGATGCGGAGGAACTTAACTTGGCGCCGCAATTACGCGACGCGGAAAAACGGTCGGTCGCAAACACCGCATGTGGGCGATCGCATTGTCAGTGTGCTCTCCGGCTTTGGGCCCGCTAGTTACCTGCCGCTGCTGCACGACTGTCGCCCTGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTCCGCGTGGGGTTAAACGTCCATCGCGGGCTGGCCGTAATCACCTCGCGTTTCAGATGGAAGTACAGC Neisseria_meningitidis_11591 CGTACCCGCCGTGAACGGGGGTGGCGGACATAGCGCCGCTTTTCCTGGGCCATTCTCCGTCGCTTTGTTCCCCATATACCCTCATCCGCCTCCTTGCGACTGCAACCACCCAACTTGCCACGCCTTGCTTGACGATAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGATAAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACGGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATACCTCCCGAGCTCAGGCCCGCTAGTTACCTGTCGCTGTCGCGCAACTGTCGCTTCGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTCCGCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTAACGCCCTAGCCACCGTCCCGAT Neisseria_meningitidis_11592 CGCGCTTATCACTGCCAAAGACCGTAAACACAGCGCCGCCTTTCCTGGGCCATTCTCCGTCGCTTCGTTCCCCATATACTTTCATCCGCCTCCTTGCGACTACAACCACCCAATTTGCCACGCCTTGCTTGACGTTAAAAACCGTTGTTTCCGCCGT-GGGCATTCGATGCGGAGGAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTCGTCCATGTGTCCCCCGGCCTCACACCCATTAGTTACCTGTCGCTGTCGCGCAACTGTCGCCCTGTCGAGGGCGCGCAAACCTGCTCCTCCTTCTCTCTTTAAGCGGTTTCCGGCTGATCGGCGCTCGGCTGGTAAGCAATCGCGGCGGTCTCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_11593 CGCGTTTATCACGAATGGGAGTGGCGGACGTAACGGCGTCTTCCCTGTACCGTCTCTCATTGCCTCGTCTCCCATATACCCTCATCCGCCTCCTTGCGACTACAACCACCCAATTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGAGGAACTTAGCTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTCGTCAGTACGTCCCCTAGCTTCACGCCCGCTAGTTACCTGCCGCTGCTGCACGACTGCTGTTTCCCCCAGGGCACGTGGGTACATCCCGTTCGCTCTCTTTGCGCGGTTTCCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_11594 CGCGTTTATCACGAATGGGAGTGGCGGACGTAACGGCGTCTTCCCTGGACCGTCTCTTATTGCCTCGTCTCCTGCGTACCCCCATCCGCCTTCTTGCGTGTGTGGTAGTAGCCCCAGAAATAATCCATGCCGCGGTAAAAACCGTTGTTTCCGCCGT-GTGCGTTCGATGCGGATGAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATACCTCCCGAGTTCACGCCCACTAGCTACCTGCCGCTGCTGCACAGCTGTCGCCCTGTTGAGAGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTTTCCGGGGGGCCGGCGCCCGGCTGCGAGGCAACGACAATCGCCCCACGCCCTAGCCACCGTCCCGAT Neisseria_meningitidis_11595 CGCGCTTATCACTGCCAAAGACCGTAAACACAGCGCCGCCTTTCCTGGGCCATTCTCCGTCGTCTCGTCTCCCATATACCCTCATCCGCCTCCTTGCGACTGCAACCACCTAACTTGCCACGCTTTACTTGGTGTTAAAAACCGTTGTTTCCATCGT-GGGCATTCGATGCGGAGGAACTTAACTTGGCGCCGCAATTACGCGACGCGGAAAAACGGTCAGTCGCAAACACCGCATGTGGGCGATCGCATTGTCAGTGTGCTCTCCGGCTTTGGGCCCGCTAGCTACCTGCTCCCACCGCGCAACTGTCGCCCTGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTTTCCGTGGGGTTAAACGTCCATCGCGGGCTGGCCGTAATCACCTCGCGTTTCAGATGGAAGTACAGC Neisseria_meningitidis_11597 CACGCTTATTACGAATGGGAGTGGCGGGCGTAACAGCGCCCTCCTTGGACCGTCTCTCATTGCCTCGTCTCCCATATACCCTCATCCGCCTCCTTGCGACTGCAACTACCCAACTTACCACGCTTTGCTTGACGGTAAAAACCGCTGTTTCCACCTT-GGGCATTCGATGCGGATGAACCTAGCCTGGCTCCGCAGCTACGCAACGCTGACGCGGGACCAAAGCCGCCGGTTTACCGTGTCCTATCGCGTCATCCGTGTGCTCTCCGGCTTTGGGCCCGCTAGTTACCTGCCGCTGCTGCACGACTGTCGCCCTGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTCCGCGTGGGGTTAAACGTCCATCGCGGGCTGGCCGTAATCACCTCGCGTTTCAGATGGAAGTACAGC Neisseria_meningitidis_11598 CGTACCCGCCGTGAACGGGGGTGGCGGACATAGCGCCGCCTTTCCTGGGCCATTCTCCGTCGTCCCCTCTCCCATATACCCTCATCCACCTCCTTGCGACTGCAACCACCCAACTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGATAAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACGGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATGTTTCCCGGCTTCACACCCGCTATCCGTGCACCGCCACCATACGATTGTCGCCCTGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAGCGGTCCGCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTAATGCCCTAGCCACCGTCCCGAT Neisseria_meningitidis_11617 CACGCTTATTACGAATGGGAGTGGCGGGCGTAACAGCGCCCTCCTTGGACCGTCTCTCATTGCCTCGTCTCCTGCGCGTCCCTGCTCGCTGCTGTGCGACTACAACCACCCAATTTGCCACGCCTTGCTTGACAGGAAAAACCGCTGTTTCTACCGT-GGGCGTTCGATGCGGATAAACCTAGCCTGGCTCCGCAGTTACGCGGCGCTGACGCGGGACCAAAGCCGCCGGTTTACCGTGTCCTATCGCGTCGTCCGTATACCTCCCGAGTCCAGGTCCACTAGTTACCTGCCGCTGCTGCACGACTGTCGCCCTGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTCCGCGTGGGGTTAAACGTCCATCGCGGGCTGGCCGTAATCACCTCGCGTTTCAGATGGAAGTACAGC Neisseria_meningitidis_11624 CGCGCTTATCACTGCCAAAGACCGTAAACACAGCGCCGCCTTTCCTGGGCCATTCTCCGTCGTCTCGTCTCCCATATACCCTCATCCGCCTCCTTGCGACTGCAACCACCTAACTTGCCACGCTTTACTTGGTGTTAAAAACCGTTGTTTCCATCGT-GGGCATTCGATGCGGAGGAACTTAACTTGGCGCCGCAATTACGCGACGCGGAAAAACGGTCAGTCGCAAACACCGCATGTGGGCGATCGCATTGTCAGTGTGCTCTCCGGCTTTGGGCCCGCTAGCTACCTGCTCCCACCGCGCAACTGTCGCCCTGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTTTCCGTGGGGTTAAACGTCCATCGCGGGCTGGCCGTAATCACCTCGCATTTCAGATGGAAGTACAGC Neisseria_meningitidis_11638 CGCGCTTATCACTGCCAAAGACCGTAAACACAGCGCCGCCTTTCCTGGGCCATTCTCCGTCGTCTCGTCTCCCATATACCCTCATCCGCCTCCTTGCGACTGCAACCACCTAACTTGCCACGCTTTACTTGGTGTTAAAAACCGTTGTTTCCATCGT-GGGCATTCGATGCGGAGGAACTTAACTTGGCGCCGCAATTACGCGACGCGGAAAAACGGTCGGTCGCAAACACCGCATGTGGGCGATCGCATTGTCAGTGTGCTCTCCGGCTTTGGGCCCGCTAGTTACCTGCCGCTGCTGCACGACCATCGTTTCCCCCAGGATGTGTGGGTACATCATTTTCGTTCCCCCTGAAGGGTCCGCGTGGGGTTAAACGTCCATCGCGGGCTGGCCGTAATCACCTCGCGTTTCAGATGGAAGTACAGC Neisseria_meningitidis_11642 CGTACCCGCCGTGAACGGGGGTGGCGGACATAGCGCCGCCTTTCCTGGGCCATTCTCCGTCGTCCCCTCTCCCATATACCCTCATCCACCTCCTTGCGACTGCAACCACCCAACTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGATAAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACGGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATGTTTCCCGGCTTCACGCCCGCTATCCGTGCACCGCCACCATACGATTGTCGCCCTGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAGCGGTCCGCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTAATGCCCTAGCCACCGTCCTGAT Neisseria_meningitidis_11741 CGCGCTTATCACGAATGGGAGTGGCGGGTGTAGCGTTACCCATTCCAGGTTACTTCTTACTGCCTCCCCTCCCATATACTTTCATCCGCCTCCTTGCGACTGCAACCACCTAACTTGCCACGCCTTGCTTGACGTTAAAAACCGCTATTTCCACCGT-GGGCATTCGATGCGGATAAACCTAGCCTGGCTCCGCAACTATGCAACGCTGACGCGGGACCAAAGCTGCTGGTTTACTGTGTCCTTCAAGGCCGTCCGTACGCCTCCTAGCTTCACGCCCGCTAGCTACCTGCCGCTGCTGCACGACTGTCGCCCTGTTGAAGGCGTATGGGTACATCATGTTCGTCTCTCCCGCGCCGTTTCCGGGGAGTCGGCGCCCGATTGTTAAGCAATCGCAGTGGTCTCACGCCCTGACCACCGTCCCGAC Neisseria_meningitidis_175 CACGCTTATTACGAATGGGAGTGGCGGGCGTAACAGCGCCCTCCTTGGACCGTCTCTCATTGCCTCGTCTCCCGCGTACCCCCATCCGACTTCTTGCGACTACAACCACCCAATTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGAGGAACTTAGCTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTCGTCAGTATACCTCCCGAGTCCAGGTCCACTAGCTACCTGCTCCCACCATACGACTGTCGCCCTGTCGAGGGCGCGCAAACCTGCTCCTCCTTCTCTCTTTAAGCGGTCCGCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_178 TGCGCTTATCACGAATGGGAGTGGCGGACGTCACGGCGTCTTCCCTGGACCGTCTCTCATTGCCTCGTCTCCCATATACTCCCATCTGCCTCCTTGCGTGCGTGGTAGTAGCACCAGAAGTAATCCATGCCGCGCACTGCGAAATCGCCGGCGTGAGTGAGCGCTTCCTA-CAGTGGCACCGGCTCGAACATATCCACTTAAAAGCGGGAAAAACGGTCGGTCGCAAACACCGCATGGGGGTTTCAAGGCCGCTCGCGTGCCTCTCGAGTTCACGCCCATTAGCTACCTGCTCCCACCGCGCAACTGTCGCCCTGTCCAGGGCACGTGGGTACATCCCGTTCGCTCTCTTTGCGCGGTCCGCGTGGGGTTAAACGTCCATTGGTAGGCAACGACAATCGCATCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_181 CGTACCCGCCGTGAACGGGGGTGGCGGACATAGCGCCGCCTTTCCTGGGCCATTCTCCGTCGCTTTGTTCCCCATATACCCTCATCCGCCTCCTTGCGACTGCAACCACCCAACTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGATAAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACGGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATACCTCCCGAGCTCAGGCCCGCTAGTTACCTGTCGCTGTCGCGCAACTGTCGCTTCGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTCCGCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTAACGCCCTAGCCACCGTCCCGAT Neisseria_meningitidis_192 CGTACCCGCCGTGAACGGGGGTGGCGGACATAGCGCCGCCTTTCCTGGGCCATTCTCCGTCGTCCCCTCTCCCATATACCCTCATCCACCTCCTTGCGACTGCAACCACCCAACTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGATAAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACGGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATGTTTCCCGGCTTCACGCCCGCTATCCGTGCACCGCCACCATACGATTGTCGCCCTGTTGAGGGCGTATGGGTACATCCCTTTCGTTCCCCCTGAGCGGTCCGCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTAATGCCCTAGCCACCGTCCCGAT Neisseria_meningitidis_198 CGCGCTTATCACGAATGGGAGTGGCGGGTGTAGCGTTACCCATTCCAGGTTACTTCTTACTGCCTCCCCTCCCATATACTTTCATCCGCCTCCTTGCGACTGCAACCACCTAACTTGCCACGCCTTGCTTGACGTTAAAAACCGCTATTTCCACCGT-GGGCATTCGATGCGGATAAACCTAGCCTGGCTCCGCAACTATGCAACGCTGACGCGGGACCAAAGCTGCTGGTTTACTGTGTCCTTCAAGGCCGTCCGTACGTCCCCTAGCTTCACGCCCGCTAGCTACCTGCCGCTGCTGCAGGACTGTCGCCCTGTTGAAGGCGTATGGGTACATCATGTTCGTCTCTCCCGCGCCGTTTCCGGGGAGTCGGCGCCCGATTGTTAAGCAATCGCAGTGGTCTCACGCCCTGACCACCGTCCCGAC Neisseria_meningitidis_207 CGCGCCCGCCGCGAACGGGAGTGATGGGCACAGGGCCGCCCTCCTTGGACCATTCCCCGTTACCTCCTCTTCTATATACTCCCATCCGCCTCCTTGCGACTGCAACCACCTAACTTGCCACGCTTTACTTGGTGTTAAAAACCGTTGTTTCCATCGT-GGGCATTCGATGCGGAGGAACTTAACTTGGCGCCGCAATTACGCGACGCGGAAAAACGGTCGGTCGCAAACACCGCATGTGGGCGATCGCATTGTCAGTATGTCTCCCGAGTTCACGCCCGCTAGCTGTGCACCGTCACCATACGACTGTCGCCCTGTTGAGGACGTATGGGTACATCATTTTCGTTCCCCCTGCGCGATCCACGTGGGGTTAAACATCCATTGGTAGCTGGTCTCAGCGGTCTCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_2075 CGCGTTTATCACGAATGGGAGTGGCGGACGTAACGGCGTCTTCCCTGGACCGTCTCTTATTGCCTCGTCTCCCATATACCCTCATCCGCCTCCTTGCGTGTGTGGTAGTAGCCCCAGAAATAATCCATGCCGCGGTAAAAACCGTTGTTTCCGCCGT-GTGCGTTCGATGCGGATGAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATACCTCCCGAGTTCACGCCCACTAGCTACCTGCCGCTGCTGCACAACCATCGTTTCCCCCAGGATGTGTGGGTACATCATTTTCGTTCCCCCTGAAGGGTTTCCGGGGGGCCGGCGCCCGGCTGCGAGGCAACGACAATCGCCCCACGCCCTAGCCACCGTCCCGAT Neisseria_meningitidis_2724 CGTACCCGCCGTGAACGGGGGTGGCGGACATAGCGCCGCCTTTCCTGGGCCATTCTCCGTCGCTTTGTTCCCCATATACCCTCATCCGCCTCCTTGCGACTACAACCACCCAATTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGAGGAACTTAGCTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTCGTCAGTGTGTCCCCCGGCCTCAGGCGTATCAGCTGTGCGCCGCTGCCGCGCAACCATCGTTTCCCCCAGGATGTGTGGGTACATCATTTTCGTTCCCCCTGAAGGGCTTCTAGCGGGTTAAAAGTTCACGACGAGCTGGTCGCAGTGGTCTCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_2880 CGTGCCCGCCGCGAACGGGGGTGGCGGACATAGCGGCGCCTTTCCTGGGCCATCTCTCATTGCCTCGTCTCCCGCGTACCCCCATCCGACTTCTTGCGACTACAACCACCCAATTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGAGGAACTTAGCTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTCGTCAGTATGTCTCCCGAGTTCACGCCCGCTAGCTGTGCGCCCCTGCCGCGCAACTGTCGCCCTGTTGGAGGCGTATGGGTACATCATTTTCGTTCCCCCTGAAGGGTCCGCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_35 CGCGTTTATCACGAATGGGAGTGGCGGACGTAACGGCGTCTTCCCTGTACCGTCTCTCATTGCCTCGTCTCTTATATACTCCCATCCGCCTCCTCAGATGTGTGGTAGTAGCCCCAGAAATAATCCATGCCGCGGTAAAAACCGTTGTTTCCGCCGT-GTGCGTTCGATGCGGATGAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCCATGTGTCCCCCGGCCTCACACCCATTGTCCGTGCACCGCCACCATACGATTGTCGTCCTGTTGGAGGCGTATGGGTACATCATTTTCGTTCCCCCTGAAGCGTTTCCGGGGAGTCGGCGCCCGATTGTTAAGCAATCGCAGTGGTCTCACGCCCTGACCACCGTCCCGAC Neisseria_meningitidis_53 CGCGTTTATCACGAATGGGAGTGGCGGACGTAACGGCGTCTTCCCTGGACCGTCTCTTATTGCCTCGTCTCCTGCGTACCCCCATCCGCCTTCTTGCGTGTGTGGTAGTAGCCCCAGAAATAATCCATGCCGCGGTAAAAACCGTTGTTTCCGCCGT-GTGCGTTCGATGCGGATGAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATACCTCCCGAGTTCACGCCCACTAGCTACCTGCCGCTGCTGCACAACTGTCGCCCTGTTGAGAGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTTTCCGGGGGGCCGGCGCCCGGCTGCGAGGCAACGACAATCGCCCCACGCCCTAGCCACCGTCCCGAT Neisseria_meningitidis_7389 CGCGTTTATCACGAATGGGAGTGGCGGACGTAACGGCGTCTTCCCTGGACCGTCTCTTATTGCCTCGTCTCCCGCGTACCCCCATCCGACTTCTTGCGTGTGTGGTAGTAGCCCCAGAAATAATCCATGCCGCGGTAAAAACCGTTGTTTCCGCCGT-GTGCGTTCGATGCGGATGAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATACCTCCCGAGTTCACGCCCACTAGCTACCTGCCGCTGCTGCACAACTGTCGCCCTGTTGAGAGCGTATGGGTACATCCCTTTCGTTCCCCCTGAAGGGTTTCCGGGGGGCCGGCGCCCGGCTGCGAGGCAACGACAATCGCCCCACGCCCTAGCCACCGTCCCGAT Neisseria_meningitidis_767 CGTGCCCGCCGCGAACGGGGGTGGCGGACATAGCGGCGCCTTTCCTGGGCCATCTCTCATTGCCTCGTCTCCCGCGTACCCCCATCCGACTTCTTGCGTGTGTGGTAGTAGCCCCAGAAATAATCCATGCCGCGGTAAAAACCGTTGTTTCCGCCGT-GTGCGTTCGATGCGGATGAACTTAGGTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTTGTCAGTATGTCTCCCGAGTTCACGCCCGCTAGCTGTGCGCCCCTGCCGCGCAACTGTCGCCCTGTTGGAGGCGTATGGGTACATCATTTTCGTTCCCCCTGAAGGGTCCGCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_7849 CGTGCCCGCCGCGAACGGGGGTGGCGGACATAGCGGCGCCTTTCCTGGGCCATCTCTCATTGCCTCGTCTCCCATATACCCTCATCCGCCTCCTTGCGACTACAACCACCCAATTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGAGGAACTTAGCTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTCGTCAGTGTGTCCCCCGGCCTCAGGCGTATCAGCTGTGCGCCGCTGCCGCGCAACCATCATTTCCCCCAGGATGTGTGGGTACATCATTTTCGTTCCCCCTGAAGGGCTTCTAGCGGGTTAAAAGTTCACGACGAGCTGGTCGCAGTGGTCTCACGTCCTAGCCACCGTCCCGAT Neisseria_meningitidis_8447 CGCGCTTATCACTGCCAAAGACCGTAAACACAGCGCCGCCTTTCCTGGGCCATCTCTCATTGCCTCGTCTCCCGCGTACCCCCATCCGACTTCTTGCGACTACAACCACCCAATTTGCCACGCCTTGCTTGACGGTAAAAACCGCTGTTTCCGCCGT-GGGCATTCGATGCGGAGGAACTTAGCTCAAACATATCCGCTTAAAAGCGGTGCAAACAGTAGATCGTAAAAACTGCATATAGGCGATCGCGTCGTCAGTATACCTCCCGAGTCCAGGTCCACTAGCTACCTGCTCCCACCATACGACTGTCGCCCTGTCGAGGGCGCGCAAACCTGCTCCTCCTTCTCTCTTTAAGCGGTCCGCGTGGGGTTAAACGTCCATTGGTAGCTGGTCGCAGCGGTCTCACGTCCTAGCCACCGTCCCGAT ; END; [ The following blocks are output data for analysis step 19324 ] BEGIN TREES; TITLE MLST_Ethiopian_Carriage_Study; LINK TAXA = TaxaForAnalysisStep19324; TREE UNTITLED = [&R] ((((Neisseria_meningitidis_11587:1.0000005E-6,Neisseria_meningitidis_11638:0.03748646201)56:1.0000005E-6,(Neisseria_meningitidis_11595:1.0000005E-6,Neisseria_meningitidis_11624:0.002412628267)100:0.02975605019)90:0.04148813412,((Neisseria_meningitidis_198:0.007270705383,Neisseria_meningitidis_11741:1.0000005E-6)100:0.3833749782,(Neisseria_meningitidis_11597:0.01215914731,Neisseria_meningitidis_11617:0.1027361116)74:1.0000005E-6)73:0.2056029784)62:0.0818262638,(Neisseria_meningitidis_10450:0.1688598958,((Neisseria_meningitidis_1053:1.0000005E-6,Neisseria_meningitidis_207:0.002412684765)100:0.05491450387,(((Neisseria_meningitidis_181:1.0000005E-6,(Neisseria_meningitidis_11372:1.0000005E-6,Neisseria_meningitidis_11591:0.002416089609)64:0.00241676743):0.04971666437,(Neisseria_meningitidis_11598:0.00241626674,(Neisseria_meningitidis_192:1.0000005E-6,Neisseria_meningitidis_11642:0.002416475965)50:1.0000005E-6)100:0.05034389124)100:0.0352950182,(((Neisseria_meningitidis_2724:0.03228581656,(Neisseria_meningitidis_11:1.0000005E-6,Neisseria_meningitidis_7849:0.002417742146)98:1.0000005E-6)100:0.1100165779,(Neisseria_meningitidis_11593:0.0782059413,(Neisseria_meningitidis_175:0.01672679576,(Neisseria_meningitidis_8447:1.0000005E-6,Neisseria_meningitidis_11592:0.1929070494)97:0.05253380872)100:0.09915273373)68:0.07567364146)29:1.0000005E-6,(Neisseria_meningitidis_2880:1.0000005E-6,(Neisseria_meningitidis_767:1.0000005E-6,(Neisseria_meningitidis_178:0.4050749079,(Neisseria_meningitidis_35:0.1130488521,(Neisseria_meningitidis_2075:0.04208924099,(Neisseria_meningitidis_7389:0.002621712012,(Neisseria_meningitidis_53:1.0000005E-6,Neisseria_meningitidis_11594:0.002415839794)83:0.002227264715)89:0.01121362138)70:0.0498613975)57:0.05053573009)94:0.07147442132)96:0.1018857123)88:0.02397069541)61:0.0214363628)98:0.1786517133)100:0.01291588555)75:0.0818262638); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr99999] END;