#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 10, 2025; 23:59 GMT TreeBASE (cc) 1994-2008 Study reference: Cacciali P., Morando M., Medina C.D., Koehler G., Motte M., & Avila L.J. 2017. Taxonomic analysis of Paraguayan samples of Homonota fasciata Duméril & Bibron (1836) with the revalidation of Homonota horrida Burmeister (1861) (Reptilia: Squamata: Phyllodactylidae) and the description of a new species. PeerJ, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S20987] [ The following blocks are input data for analysis step 20805 ] BEGIN TAXA; TITLE TaxaForAnalysisStep20805; DIMENSIONS NTAX=27; TAXLABELS Garthia_gaudichaudi_IBEG1.1 Gymnodactylus_geckoides_LG1050 Gymnodactylus_geckoides_LG911 Homonota_andicola_LJAMMCNP12490 Homonota_borellii_LJAMMCNP12125 Homonota_borellii_LJAMMCNP5842 Homonota_darwinii_LJAMMCNP11424 Homonota_darwinii_LJAMMCNP9266 Homonota_rupicola_RUPI1 Homonota_rupicola_RUPI2 Homonota_spa_LJAMMCNP_10505 Homonota_spa_LJAMMCNP5047 Homonota_spb_MNHNP11406 Homonota_spb_MNHNP11409 Homonota_taragui_LJAMMCNP14419 Homonota_taragui_LJAMMCNP14420 Homonota_underwoodi_LJAMMCNP10923 Homonota_underwoodi_LJAMMCNP10931 Homonota_uruguayensis_UFRGS1568 Homonota_uruguayensis_UFRGS2139 Homonota_whitii_LJAMMCNP12110 Homonota_whitii_LJAMMCNP14388 Homonota_williamsii_LJAMMCNP4467 Homonota_williamsii_LJAMMCNP6517 Phyllodactylus_kofordi_TG266 Phyllopezus_pollicaris_CHUNB57388 Phyllopezus_przewalskii_LJAMMCNP12089 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M41121] TITLE SINCAIP_Matrix; LINK TAXA = TaxaForAnalysisStep20805; DIMENSIONS NCHAR=449; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Garthia_gaudichaudi_IBEG1.1 TGAGAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAAGTAGCAAGATTGAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCAAATAATTCTGAAGATCAGAAGAACACACCTGTGAAAAGAACTGATAAGCCCAGGCCGCAGCCCATCGTGGAAAACATTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACACACTTCGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAACCTCAAAATCTGTAGATGGTCACAGCCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGATTGGGACTGTATCTCA{AG}AGCCAGGTCTTGGGAGATTCCTGTCAGTCTAGCCCTGATG Gymnodactylus_geckoides_LG1050 TGAGAATGTCTGCATGCAGGAAAAACTGTCACTAGAATTTCAGGATGTGCATGCTTCTAGAAATACAAGGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTGAAGCATCTAATGCAACGCTCCCTCAGTGAGTCTGATACAGATTCAAATAATTCTGAAGATCAAAAGAACACACCTGTGAAAAGAACTGATAAACCCAGGCCACAGCCCATTGTGGAAAACACTGAAAGCACTGAAAACTTGCACCTAATGATTAAGAAACACACTTTGGCAGCAGGGCACCGCTTTCCTTTTGGGATCAGAGCCTCAAAATCTGTAGATGGTCACAGCCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGACTGGGACTATATCTCAGAGCCAGATATTAGGAGATGCCTGTCAGTCTAGCCCTGATA Gymnodactylus_geckoides_LG911 TGAGAATGTCTGCATGCAGGAAAAACTGTCACTAGAATTTCAGGATGTGCATGCTTCTAGAAATACAAGGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTGAAGCATCTAATGCAACGCTCCCTCAGTGAGTCTGATACAGATTCAAATAATTCTGAAGATCAAAAGAACACACCTGTGAAAAGAACTGATAAACCCAGGCCACAGCCCATTGTGGAAAACACTGAAAGCACTGAAAACTTGCACCTAATGATTAAGAAACACACTTTGGCAGCAGGGCACCGCTTTCCTTTTGGGATCAGAGCCTCAAAATCTGTAGATGGTCACAGCCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGACTGGGACTATATCTCAGAGCCAGATATTAGGAGATGCCTGTCAGTCTAGCCCTGATA Homonota_andicola_LJAMMCNP12490 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCCGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_borellii_LJAMMCNP12125 ???????????????????GAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCAAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATCGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGT???????????????? Homonota_borellii_LJAMMCNP5842 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCAAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATCGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_darwinii_LJAMMCNP11424 TGAAAATGTCTGCACGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCCGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACCTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_darwinii_LJAMMCNP9266 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCCGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTT{AG}CACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_rupicola_RUPI1 TGAAAATGTCTGCATGCAAGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATCGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_rupicola_RUPI2 TGAAAATGTCTGCATGCAAGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATCGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_spa_LJAMMCNP_10505 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAAAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAGCATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAG{CT}CCTGATG Homonota_spa_LJAMMCNP5047 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAAAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAGCATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGTCCTGATG Homonota_spb_MNHNP11406 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAAAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTC{CT}GATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAGCATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCGACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_spb_MNHNP11409 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAAAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAGCATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCGACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAG{CT}CCTGATG Homonota_taragui_LJAMMCNP14419 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCAAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATCGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_taragui_LJAMMCNP14420 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCAAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATCGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_underwoodi_LJAMMCNP10923 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_underwoodi_LJAMMCNP10931 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_uruguayensis_UFRGS1568 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATCGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATGCTTTGGCAGCAGGGCGCCGCTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCCTCTCCCACTTCAGAAAGCAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_uruguayensis_UFRGS2139 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATCGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATGCTTTGGCAGCAGGGCGCCGCTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCCTCTCCCACTTCAGAAAGCAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_whitii_LJAMMCNP12110 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTC{CT}GAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGTCCTGATG Homonota_whitii_LJAMMCNP14388 TGAAAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCCGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGTCCTGATG Homonota_williamsii_LJAMMCNP4467 TGAAAATGTCTGCACGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCCGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Homonota_williamsii_LJAMMCNP6517 TGAAAATGTCTGCA{CT}GCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTAAAGCATCTAATGCAACGATCCCTCAGTGAGTCCGATACAGATTCGAATAATTCCGAAGATCAGAAAAACACACCTGTAAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAATACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTTGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGTCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGCCCAGTATCAGGCTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGTCTGTCAGTCTAGCCCTGATG Phyllodactylus_kofordi_TG266 TGAGAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAAAAATACAAAGAAGAGTCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGACTGAAGCATCTAATGCAACGATCTCTCAGTGAGTCTGATACAGATTCGAATAATTCTGAAGATCAGAAAAACACACCTGTGAAAAGAACTGATAAGCCCAGGCCACAGCCCATTGTGGAAAACACTGAAAGCACTGAGAACTTGCACCTAATGATTAAGAAACATACTTTGGCAGCAGGGCGCCGGTTTCCTTTCGGGATTAGAGCCTCAAAATCTGTAGATGGTCACAGCCCTTCTCCCACTTCAGAAAGCAGTGATCCGGATAATGAAGCCCAGTATCAGACTGGGACTATATCTCAGAGCCAGGTCTTTGGAGATGCCTGTCAAACTAGCCCTGATG Phyllopezus_pollicaris_CHUNB57388 TGAGAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAGAAATACAAAGAAGAATCCTTTGGAGAAAAAGGAAATGAAACTAGCAAGATTGAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCGAATAATTCTGAAGATCAGAAGAACACACCTGTGAAAAGAACTGATAAACCCAGGCCACAGCCCATCGTGGAAAACATGGAAAGCACTGAAAACTTGCACCTAATGATTAAGAAACACACTTTGGCAGCAGGGCACCGTTTTCCTTTTGGGATTAGAGCTTCAAAATCTTTAGATGGTCACAGCCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGTCCAGTATCAAACTGGGACTATATCTCAGAGCCAGGTCTTGGGAGATGCCTGTCAGTCTAGCCCTGATG Phyllopezus_przewalskii_LJAMMCNP12089 TGAGAATGTCTGCATGCAGGAAAAGCTGTCACTAGAATTTCAGGATGTGCATGCTTCTAGAAATACAAAGAAGAATCCTTTGGAGAAAAAGGAAATGAAACCAGCAAGATTGAAGCATCTAATGCAACGATCCCTCAGTGAGTCTGATACAGATTCGAATAATTCTGAAGATCAGAAGAACACACCTGTGAAAAGAACTGATAAACCCAGGCCACATCCCATCGTGGAAAACATGGAAAGCACTGAAAACTTGCACCTAATGATTAAGAAACACACTTTGGCAGCAGGGCGCCGTTTTCCTTTTGGGATTAGAGCTTCAAAATCTGTAGATGGTCACAGCCCTTCTCCCACTTCAGAAAGTAGTGATCCTGATAATGAAGTCCAGTATCAGACTGGGACTATATATCAGAACCAGGTCTTGGGAGATGCCTGTCAATCTAGCCCTGATG ; END; [ The following blocks are output data for analysis step 20805 ] BEGIN TREES; TITLE SINCAIP_ML; LINK TAXA = TaxaForAnalysisStep20805; TREE tree_1 = [&R] (((Phyllodactylus_kofordi_TG266:0.01926666702085189,((((((Homonota_darwinii_LJAMMCNP11424:0.0022180608916774628,Homonota_williamsii_LJAMMCNP4467:8.8590627666038E-7):0.002217514994366857,Homonota_williamsii_LJAMMCNP6517:8.8590627666038E-7):8.8590627666038E-7,(Homonota_andicola_LJAMMCNP12490:8.8590627666038E-7,Homonota_darwinii_LJAMMCNP9266:8.8590627666038E-7):8.8590627666038E-7):8.8590627666038E-7,(Homonota_whitii_LJAMMCNP12110:8.8590627666038E-7,Homonota_whitii_LJAMMCNP14388:8.8590627666038E-7):0.0022188178580227593):0.002218738557976083,(((Homonota_spb_MNHNP11409:8.8590627666038E-7,Homonota_spb_MNHNP11406:8.8590627666038E-7):0.0022564483156150414,(Homonota_spa_LJAMMCNP_10505:8.8590627666038E-7,Homonota_spa_LJAMMCNP5047:0.0021928285223996986):3.14241774705457E-6):0.004476905563825298,(Homonota_underwoodi_LJAMMCNP10923:8.8590627666038E-7,Homonota_underwoodi_LJAMMCNP10931:8.8590627666038E-7):8.8590627666038E-7):8.8590627666038E-7):0.004454170393862113,(((Homonota_uruguayensis_UFRGS1568:8.8590627666038E-7,Homonota_uruguayensis_UFRGS2139:8.8590627666038E-7):0.00905339484708884,(Homonota_rupicola_RUPI2:8.8590627666038E-7,Homonota_rupicola_RUPI1:8.8590627666038E-7):0.0022221899251367544):8.8590627666038E-7,(Homonota_borellii_LJAMMCNP12125:8.8590627666038E-7,(Homonota_borellii_LJAMMCNP5842:8.8590627666038E-7,(Homonota_taragui_LJAMMCNP14420:8.8590627666038E-7,Homonota_taragui_LJAMMCNP14419:8.8590627666038E-7):8.8590627666038E-7):8.8590627666038E-7):0.002223317395214423):8.8590627666038E-7):0.01636553962587216):0.00817573711881067,Garthia_gaudichaudi_IBEG1.1:0.01950809553223646):0.004786472975610361,((Phyllopezus_pollicaris_CHUNB57388:0.006097534203422053,Phyllopezus_przewalskii_LJAMMCNP12089:0.012228750493222295):0.011145063930398928,(Gymnodactylus_geckoides_LG1050:8.8590627666038E-7,Gymnodactylus_geckoides_LG911:8.8590627666038E-7):0.031332204559654436):0.004786472975610361); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr104090] END;